Rorug06G0329100

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0005901
Physical Location & Seq
Forward (+)
48215378 .. 48222447
7070 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0329100.1

Sequence Viewer

Length: 1791 bp
ATGTCTCTTGGCTTTGCAATTGTGGAGGCTGTGATACTTGCTTGTTATTCACTTCCCTATTCAATCTATGTAGCTAGCCACAGGGTCAAGCATGTGATGCTGACAAGTATGTTATTGGTCTGTGGTGCAATGACAATGACGTGGATATGTGATACCATTACAGAATCTGGATTCGGCCAAGGTTCATCTTTAATAATATGTGTGCAAATATTGATTGGCTACACAGAGACATTATACAAAATGTTGACCCAGCTTTCAGGAAGTTCTGTTAGTTGGTGGCCATACTTATTTGGAGTATTGGGCGTTTTCACTATAGTCACTATGTGGGCAGTTGTGGTAACTGAAGGATGTAGGAAGATAAAGCTTCAGTACTACGGTTTTAAGCTGGCTTCTGCTGCAAGGGATGACTCACCTATTACTGAAGTGGAGCCCTATATACCTTTTACTATTAATCCAGCAGGAATGCAGCCTGTTCTCACAACTACTTATCTCTTGGCATTTCCCAGCATTCTTGCAAGTCTTCTTGGTTCGTCTTTCTGGGAGCATGTTAAGGAGATATTGAACCCTGATACTTCTATTGGTGCAGCGCCTTGGGTGTACTACACAGTATATGCGTTTTTTGTCTTTTTATTCAATATATTTGACATAGCCAACTTGCCCAAGGAAATTGCTGACTACTTAAATAAGATGGGTGCAAGGATACCAAATATAAAACCTGGAAAGGCTACGATTGAATATCTCACAAAGATTCAGGCATCGACACGTTTTTGGGGTGGTGTATTGTTAAGCATCTTAGCAACAACATCAAGCATACTTGATCACTATTTACGTAACATCAATGCGGGATTTTCAATCGGGTTGACATCAGTCTTAATAATAGTGGGTTCGATTATTGAACTTAGAAGATCATATCAAGCATATAATGTGATGCCAAGTTTAAGTAAAGCCTTAAGACGGTACGATAGTTCTCTCGGGACGAAGAAGATAGAGTCATCGGAGATGGAGTTCACGGCCAACTCACTGGACGGCTCCGTCATCTTCCACGCCATTAACGAAATCTCAAGTTTCCTACTCTTCATGCACCAGCAAATCCCCGCAGTGTTGCAGGACATCACCGCGGAATTCGATTCCCGCTGCGACGAGTACAAGACCTTGGAATCGGCTCTGAGAGAAGACCAGGTGAAGCCGGCGCTGCGGAGAAAGCACGCCGGCGAAATGAGGGAAGCCAAGCGAGGGATTCGAAGGTTCCAGAAGCTGATGCACGGCGTTTCGAATTTCCAAACGGCGCTGAAGACGATCATCAGCGGAACTCCTCGGTTCCGAACAGCGCTTCTGATTCTCGGAGGGAATCCAATGCGGCCTCAACACGTGTACGAATTGAGCTTCTCCGGAAATTTAATTCCTCCCGGTGGCGAAGAAATTGATTTTGCGAAAAGCAGAGCGGCGGAAGTGCTTTGTAGAAAAGCGATTCGGGGGTTGGTCTCGGAGAATGTTGGGTCTGTTTCGTATCCGGGTCCTTGGAAGCTGTTCCTGTTGGTTAAAGCTCCCTCTTCTTTCAATCAGCCTCTGCATTTTCTTCCCAAGCGAGATTTTAAATACAGCAACAAGATTTTGCCTATGAGGCTAAGCTTCAAATGCAAAAACCAGGACCAGAACATTGATCAGTTTTCGCAAACCGGCAGCTCTGATGGGTTGGTTGAGTCTGCTCCGGATGGTGATGATTTTATATGGTTTCAATGTCGACATGTAATCAAGGGAATAGCATTTAACACAGTACCTCAAGGAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

596

Amino Acids

66.52

Weight (kDa)

8.83

Isoelectric Point (pI)

43.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SecY PF00344 2 - 299 7e-50 SecY
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1031
AccBSI CCGCTC 1 cut(s) 1442
AccI GTMKAC 1 cut(s) 1741
AccII CGCG 1 cut(s) 1118
AccIII TCCGGA 2 cut(s) 1388, 1708
AcoI YGGCCR 3 cut(s) 175, 278, 1011
AcsI RAATTY 3 cut(s) 1121, 1273, 1393
AcuI CTGAAG 4 cut(s) 350, 363, 441, 1310
AcvI CACGTG 1 cut(s) 1369
AdeI CACNNNGTG 1 cut(s) 324
AfaI GTAC 6 cut(s) 371, 599, 959, 1145, 1373, 1776
AfeI AGCGCT 1 cut(s) 1329
AfiI CCNNNNNNNGG 3 cut(s) 954, 1233, 1409
AflII CTTAAG 1 cut(s) 949
AflIII ACRYGT 4 cut(s) 761, 1366, 1368, 1744
AgsI TTSAA 9 cut(s) 63, 562, 634, 734, 852, 896, 1558, 1633, 1736
AjiI CACGTC 1 cut(s) 141
AjnI CCWGG 3 cut(s) 715, 1176, 1644
AloI GAACNNNNNNTCC 2 cut(s) 989, 1021
Alw26I GTCTC 3 cut(s) 9, 221, 1486
AlwNI CAGNNNCTG 3 cut(s) 167, 1255, 1567
Ama87I CYCGRG 1 cut(s) 971
Aor13HI TCCGGA 2 cut(s) 1388, 1708
Aor51HI AGCGCT 1 cut(s) 1329
AoxI GGCC 4 cut(s) 175, 278, 1011, 1358
ApeKI GCWGC 6 cut(s) 395, 466, 584, 1134, 1192, 1680
ApoI RAATTY 3 cut(s) 1121, 1273, 1393
AseI ATTAAT 1 cut(s) 450
Asp700I GAANNNNTTC 1 cut(s) 1526
AspLEI GCGC 4 cut(s) 589, 1192, 1288, 1330
AspS9I GGNCC 2 cut(s) 1514, 1648
AsuC2I CCSGG 2 cut(s) 1407, 1512
AsuHPI GGTGA 4 cut(s) 402, 1105, 1192, 1727
AsuII TTCGAA 2 cut(s) 1240, 1271
AsuNHI GCTAGC 1 cut(s) 74
AvaI CYCGRG 1 cut(s) 971
AvaII GGWCC 2 cut(s) 1514, 1648
BaeI ACNNNNGTAYC 2 cut(s) 949, 982
BalI TGGCCA 1 cut(s) 280
BanII GRGCYC 1 cut(s) 432
BbrPI CACGTG 1 cut(s) 1369
BbsI GAAGAC 3 cut(s) 512, 1179, 1298
BbvI GCAGC 6 cut(s) 382, 478, 596, 1121, 1179, 1692
BccI CCATC 4 cut(s) 682, 994, 1682, 1706
BceAI ACGGC 4 cut(s) 1026, 1042, 1279, 1299
BciT130I CCWGG 3 cut(s) 717, 1178, 1646
BciVI GTATCC 2 cut(s) 693, 1518
BclI TGATCA 2 cut(s) 817, 1660
BcnI CCSGG 2 cut(s) 1407, 1512
BcoDI GTCTC 3 cut(s) 9, 221, 1486
BfaI CTAG 1 cut(s) 75
BfmI CTRYAG 1 cut(s) 312
BfoI RGCGCY 4 cut(s) 590, 1193, 1289, 1331
BfrI CTTAAG 1 cut(s) 949
BfuI GTATCC 2 cut(s) 693, 1518
BglI GCCNNNNNGGC 1 cut(s) 1621
BisI GCNGC 8 cut(s) 396, 467, 585, 1135, 1193, 1358, 1443, 1681
BlpI GCTNAGC 1 cut(s) 1625
BlsI GCNGC 8 cut(s) 397, 468, 586, 1136, 1194, 1359, 1444, 1682
BmcAI AGTACT 1 cut(s) 371
Bme1390I CCNGG 5 cut(s) 717, 1178, 1407, 1512, 1646
Bme18I GGWCC 2 cut(s) 1514, 1648
BmeT110I CYCGRG 1 cut(s) 971
BmgBI CACGTC 1 cut(s) 141
BmgT120I GGNCC 2 cut(s) 1514, 1648
BmiI GGNNCC 5 cut(s) 429, 1030, 1247, 1319, 1515
BmrFI CCNGG 5 cut(s) 717, 1178, 1407, 1512, 1646
BmsI GCATC 5 cut(s) 87, 764, 798, 918, 1248
BmtI GCTAGC 1 cut(s) 78
BoxI GACNNNNGTC 1 cut(s) 866
BpiI GAAGAC 3 cut(s) 512, 1179, 1298
Bpu1102I GCTNAGC 1 cut(s) 1625
Bpu14I TTCGAA 2 cut(s) 1240, 1271
BpuEI CTTGAG 2 cut(s) 1045, 1764
BpuMI CCSGG 2 cut(s) 1407, 1512
BsaAI YACGTR 2 cut(s) 830, 1369
BsaI GGTCTC 1 cut(s) 1486
BsaJI CCNNGG 7 cut(s) 178, 590, 660, 1116, 1152, 1313, 1517
BsaWI WCCGGW 2 cut(s) 1388, 1708
BsaXI ACNNNNNCTCC 2 cut(s) 989, 1019
Bsc4I CCNNNNNNNGG 3 cut(s) 954, 1233, 1409
Bse118I RCCGGY 3 cut(s) 1186, 1208, 1676
Bse1I ACTGG 1 cut(s) 1026
Bse3DI GCAATG 1 cut(s) 135
BseAI TCCGGA 2 cut(s) 1388, 1708
BseBI CCWGG 3 cut(s) 717, 1178, 1646
BseDI CCNNGG 7 cut(s) 178, 590, 660, 1116, 1152, 1313, 1517
BseGI GGATG 3 cut(s) 353, 409, 1717
BseLI CCNNNNNNNGG 3 cut(s) 954, 1233, 1409
BseMI GCAATG 1 cut(s) 135
BseMII CTCAG 1 cut(s) 1157
BseNI ACTGG 1 cut(s) 1026
BseRI GAGGAG 1 cut(s) 1302
BseXI GCAGC 6 cut(s) 382, 478, 596, 1121, 1179, 1692
BseYI CCCAGC 2 cut(s) 249, 503
BsgI GTGCAG 1 cut(s) 603
Bsh1236I CGCG 1 cut(s) 1118
BshFI GGCC 4 cut(s) 177, 280, 1013, 1360
BsiHKCI CYCGRG 1 cut(s) 971
BsiSI CCGG 7 cut(s) 1187, 1209, 1389, 1407, 1511, 1677, 1709
BslFI GGGAC 1 cut(s) 988
BslI CCNNNNNNNGG 3 cut(s) 954, 1233, 1409
BsmAI GTCTC 3 cut(s) 9, 221, 1486
BsmFI GGGAC 1 cut(s) 988
BsmI GAATGC 2 cut(s) 468, 507
BsnI GGCC 4 cut(s) 177, 280, 1013, 1360
Bso31I GGTCTC 1 cut(s) 1486
BsoBI CYCGRG 1 cut(s) 971
Bsp119I TTCGAA 2 cut(s) 1240, 1271
Bsp1286I GDGCHC 1 cut(s) 432
Bsp13I TCCGGA 2 cut(s) 1388, 1708
Bsp143I GATC 4 cut(s) 817, 905, 1296, 1660
Bsp1720I GCTNAGC 1 cut(s) 1625
BspANI GGCC 4 cut(s) 177, 280, 1013, 1360
BspCNI CTCAG 1 cut(s) 1158
BspEI TCCGGA 2 cut(s) 1388, 1708
BspFNI CGCG 1 cut(s) 1118
BspLI GGNNCC 5 cut(s) 429, 1030, 1247, 1319, 1515
BspOI GCTAGC 1 cut(s) 78
BspT104I TTCGAA 2 cut(s) 1240, 1271
BspTI CTTAAG 1 cut(s) 949
BspTNI GGTCTC 1 cut(s) 1486
BsrBI CCGCTC 1 cut(s) 1442
BsrDI GCAATG 1 cut(s) 135
BsrFI RCCGGY 3 cut(s) 1186, 1208, 1676
BsrI ACTGG 1 cut(s) 1026
BssAI RCCGGY 3 cut(s) 1186, 1208, 1676
BssECI CCNNGG 7 cut(s) 178, 590, 660, 1116, 1152, 1313, 1517
BssMI GATC 4 cut(s) 817, 905, 1296, 1660
BssT1I CCWWGG 5 cut(s) 178, 590, 660, 1152, 1517
Bst2UI CCWGG 3 cut(s) 717, 1178, 1646
Bst4CI ACNGT 4 cut(s) 377, 607, 957, 1774
Bst6I CTCTTC 2 cut(s) 1079, 1555
BstAFI CTTAAG 1 cut(s) 949
BstAPI GCANNNNNTGC 1 cut(s) 97
BstBAI YACGTR 2 cut(s) 830, 1369
BstBI TTCGAA 2 cut(s) 1240, 1271
BstC8I GCNNGC 5 cut(s) 76, 387, 1188, 1206, 1210
BstDEI CTNAG 4 cut(s) 793, 899, 1166, 1625
BstDSI CCRYGG 1 cut(s) 1116
BstF5I GGATG 3 cut(s) 353, 409, 1717
BstFNI CGCG 1 cut(s) 1118
BstH2I RGCGCY 4 cut(s) 590, 1193, 1289, 1331
BstHHI GCGC 4 cut(s) 589, 1192, 1288, 1330
BstKTI GATC 4 cut(s) 820, 908, 1299, 1663
BstMAI GTCTC 3 cut(s) 9, 221, 1486
BstMBI GATC 4 cut(s) 817, 905, 1296, 1660
BstMWI GCNNNNNNNGC 6 cut(s) 97, 395, 1192, 1201, 1621, 1635
BstNI CCWGG 3 cut(s) 717, 1178, 1646
BstNSI RCATGY 3 cut(s) 95, 548, 1748
BstPAI GACNNNNGTC 1 cut(s) 866
BstSCI CCNGG 5 cut(s) 715, 1176, 1405, 1510, 1644
BstSFI CTRYAG 1 cut(s) 312
BstSNI TACGTA 1 cut(s) 830
BstUI CGCG 1 cut(s) 1118
BstV1I GCAGC 6 cut(s) 382, 478, 596, 1121, 1179, 1692
BstV2I GAAGAC 3 cut(s) 512, 1179, 1298
BstXI CCANNNNNNTGG 1 cut(s) 1021
BsuI GTATCC 2 cut(s) 693, 1518
BsuRI GGCC 4 cut(s) 177, 280, 1013, 1360
BtgI CCRYGG 1 cut(s) 1116
BtrI CACGTC 1 cut(s) 141
BtsCI GGATG 3 cut(s) 353, 409, 1717
BtsI GCAGTG 1 cut(s) 1104
BtsIMutI CAGTG 2 cut(s) 1019, 1104
Cac8I GCNNGC 5 cut(s) 76, 387, 1188, 1206, 1210
CaiI CAGNNNCTG 3 cut(s) 167, 1255, 1567
CfoI GCGC 4 cut(s) 589, 1192, 1288, 1330
Cfr10I RCCGGY 3 cut(s) 1186, 1208, 1676
Cfr13I GGNCC 2 cut(s) 1514, 1648
Cfr42I CCGCGG 1 cut(s) 1119
CsiI ACCWGGT 1 cut(s) 1176
Csp6I GTAC 6 cut(s) 370, 598, 958, 1144, 1372, 1775
CviAII CATG 4 cut(s) 92, 545, 1078, 1745
CviQI GTAC 6 cut(s) 370, 598, 958, 1144, 1372, 1775
DdeI CTNAG 4 cut(s) 793, 899, 1166, 1625
DpnI GATC 4 cut(s) 819, 907, 1298, 1662
DpnII GATC 4 cut(s) 817, 905, 1296, 1660
DraI TTTAAA 1 cut(s) 1594
DraIII CACNNNGTG 1 cut(s) 324
DrdI GACNNNNNNGTC 1 cut(s) 1031
DseDI GACNNNNNNGTC 1 cut(s) 1031
EaeI YGGCCR 3 cut(s) 175, 278, 1011
Eam1104I CTCTTC 2 cut(s) 1079, 1555
EarI CTCTTC 2 cut(s) 1079, 1555
EciI GGCGGA 1 cut(s) 1460
Eco105I TACGTA 1 cut(s) 830
Eco130I CCWWGG 5 cut(s) 178, 590, 660, 1152, 1517
Eco24I GRGCYC 1 cut(s) 432
Eco31I GGTCTC 1 cut(s) 1486
Eco47I GGWCC 2 cut(s) 1514, 1648
Eco47III AGCGCT 1 cut(s) 1329
Eco57I CTGAAG 4 cut(s) 350, 363, 441, 1310
Eco72I CACGTG 1 cut(s) 1369
Eco88I CYCGRG 1 cut(s) 971
EcoO109I RGGNCCY 1 cut(s) 1514
EcoRI GAATTC 1 cut(s) 1121
EcoRII CCWGG 3 cut(s) 715, 1176, 1644
EcoT14I CCWWGG 5 cut(s) 178, 590, 660, 1152, 1517
EcoT38I GRGCYC 1 cut(s) 432
ErhI CCWWGG 5 cut(s) 178, 590, 660, 1152, 1517
FaeI CATG 4 cut(s) 95, 548, 1081, 1748
FaqI GGGAC 1 cut(s) 988
FatI CATG 4 cut(s) 91, 544, 1077, 1744
FauI CCCGC 3 cut(s) 835, 1102, 1139
FbaI TGATCA 2 cut(s) 817, 1660
FblI GTMKAC 1 cut(s) 1741
Fnu4HI GCNGC 8 cut(s) 396, 467, 585, 1135, 1193, 1358, 1443, 1681
FokI GGATG 3 cut(s) 360, 416, 1724
FriOI GRGCYC 1 cut(s) 432
Fsp4HI GCNGC 8 cut(s) 396, 467, 585, 1135, 1193, 1358, 1443, 1681
FspBI CTAG 1 cut(s) 75
GlaI GCGC 4 cut(s) 588, 1191, 1287, 1329
GluI GCNGC 8 cut(s) 396, 467, 585, 1135, 1193, 1358, 1443, 1681
GsaI CCCAGC 2 cut(s) 253, 507
HaeII RGCGCY 4 cut(s) 590, 1193, 1289, 1331
HaeIII GGCC 4 cut(s) 177, 280, 1013, 1360
HapII CCGG 7 cut(s) 1187, 1209, 1389, 1407, 1511, 1677, 1709
HhaI GCGC 4 cut(s) 589, 1192, 1288, 1330
Hin1II CATG 4 cut(s) 95, 548, 1081, 1748
Hin6I GCGC 4 cut(s) 587, 1190, 1286, 1328
HinP1I GCGC 4 cut(s) 587, 1190, 1286, 1328
HincII GTYRAC 3 cut(s) 246, 861, 1742
HindII GTYRAC 3 cut(s) 246, 861, 1742
HindIII AAGCTT 2 cut(s) 362, 1627
HpaII CCGG 7 cut(s) 1187, 1209, 1389, 1407, 1511, 1677, 1709
HphI GGTGA 4 cut(s) 402, 1105, 1192, 1727
Hpy166II GTNNAC 6 cut(s) 246, 598, 861, 1008, 1372, 1742
Hpy188I TCNGA 7 cut(s) 997, 1167, 1322, 1335, 1343, 1486, 1687
Hpy188III TCNNGA 6 cut(s) 168, 258, 973, 1249, 1389, 1709
Hpy8I GTNNAC 6 cut(s) 246, 598, 861, 1008, 1372, 1742
Hpy99I CGWCG 1 cut(s) 1142
HpyAV CCTTC 2 cut(s) 338, 1236
HpyCH4III ACNGT 4 cut(s) 377, 607, 957, 1774
HpyCH4IV ACGT 4 cut(s) 140, 763, 829, 1368
HpyF10VI GCNNNNNNNGC 6 cut(s) 97, 395, 1192, 1201, 1621, 1635
HpyF3I CTNAG 4 cut(s) 793, 899, 1166, 1625
HpySE526I ACGT 4 cut(s) 140, 763, 829, 1368
Hsp92II CATG 4 cut(s) 95, 548, 1081, 1748
HspAI GCGC 4 cut(s) 587, 1190, 1286, 1328
Kpn2I TCCGGA 2 cut(s) 1388, 1708
KroI GCCGGC 2 cut(s) 1186, 1208
KroNI GCCGGC 2 cut(s) 1188, 1210
Ksp22I TGATCA 2 cut(s) 817, 1660
KspI CCGCGG 1 cut(s) 1119
Kzo9I GATC 4 cut(s) 817, 905, 1296, 1660
LmnI GCTCC 5 cut(s) 427, 541, 1034, 1549, 1711
Lsp1109I GCAGC 6 cut(s) 382, 478, 596, 1121, 1179, 1692
LweI GCATC 5 cut(s) 87, 764, 798, 918, 1248
MabI ACCWGGT 1 cut(s) 1176
MaeI CTAG 1 cut(s) 75
MaeII ACGT 4 cut(s) 140, 763, 829, 1368
MaeIII GTNAC 3 cut(s) 316, 337, 830
MalI GATC 4 cut(s) 819, 907, 1298, 1662
MbiI CCGCTC 1 cut(s) 1442
MboI GATC 4 cut(s) 817, 905, 1296, 1660
MfeI CAATTG 1 cut(s) 18
MhlI GDGCHC 1 cut(s) 432
MlsI TGGCCA 1 cut(s) 280
MluCI AATT 8 cut(s) 18, 666, 1121, 1273, 1376, 1393, 1398, 1419
MluNI TGGCCA 1 cut(s) 280
MlyI GAGTC 3 cut(s) 401, 998, 1709
Mox20I TGGCCA 1 cut(s) 280
MreI CGCCGGCG 1 cut(s) 1208
MroI TCCGGA 2 cut(s) 1388, 1708
MroNI GCCGGC 2 cut(s) 1186, 1208
MroXI GAANNNNTTC 1 cut(s) 1526
MscI TGGCCA 1 cut(s) 280
Msp20I TGGCCA 1 cut(s) 280
MspA1I CMGCKG 3 cut(s) 1118, 1134, 1305
MspCI CTTAAG 1 cut(s) 949
MspI CCGG 7 cut(s) 1187, 1209, 1389, 1407, 1511, 1677, 1709
MspR9I CCNGG 5 cut(s) 717, 1178, 1407, 1512, 1646
MunI CAATTG 1 cut(s) 18
Mva1269I GAATGC 2 cut(s) 468, 507
MvaI CCWGG 3 cut(s) 717, 1178, 1646
MvnI CGCG 1 cut(s) 1118
MwoI GCNNNNNNNGC 6 cut(s) 97, 395, 1192, 1201, 1621, 1635
NaeI GCCGGC 2 cut(s) 1188, 1210
NciI CCSGG 2 cut(s) 1407, 1512
NdeII GATC 4 cut(s) 817, 905, 1296, 1660
NgoMIV GCCGGC 2 cut(s) 1186, 1208
NheI GCTAGC 1 cut(s) 74
NlaIII CATG 4 cut(s) 95, 548, 1081, 1748
NlaIV GGNNCC 5 cut(s) 429, 1030, 1247, 1319, 1515
NmuCI GTSAC 1 cut(s) 316
NspI RCATGY 3 cut(s) 95, 548, 1748
NspV TTCGAA 2 cut(s) 1240, 1271
PciI ACATGT 1 cut(s) 1744
PcsI WCGNNNNNNNCGW 1 cut(s) 1050
PctI GAATGC 2 cut(s) 468, 507
PdiI GCCGGC 2 cut(s) 1188, 1210
PdmI GAANNNNTTC 1 cut(s) 1526
PfeI GAWTC 9 cut(s) 164, 171, 748, 1127, 1157, 1237, 1336, 1348, 1468
PkrI GCNGC 8 cut(s) 397, 468, 586, 1136, 1194, 1359, 1444, 1682
PleI GAGTC 3 cut(s) 401, 997, 1708
PmaCI CACGTG 1 cut(s) 1369
PmlI CACGTG 1 cut(s) 1369
PpsI GAGTC 3 cut(s) 401, 997, 1708
Ppu21I YACGTR 2 cut(s) 830, 1369
PpuMI RGGWCCY 1 cut(s) 1514
PscI ACATGT 1 cut(s) 1744
PshAI GACNNNNGTC 1 cut(s) 866
PshBI ATTAAT 1 cut(s) 450
Psp5II RGGWCCY 1 cut(s) 1514
Psp6I CCWGG 3 cut(s) 715, 1176, 1644
PspCI CACGTG 1 cut(s) 1369
PspFI CCCAGC 2 cut(s) 249, 503
PspGI CCWGG 3 cut(s) 715, 1176, 1644
PspN4I GGNNCC 5 cut(s) 429, 1030, 1247, 1319, 1515
PspPI GGNCC 2 cut(s) 1514, 1648
PspPPI RGGWCCY 1 cut(s) 1514
PstNI CAGNNNCTG 3 cut(s) 167, 1255, 1567
RsaI GTAC 6 cut(s) 371, 599, 959, 1145, 1373, 1776
RsaNI GTAC 6 cut(s) 370, 598, 958, 1144, 1372, 1775
SacII CCGCGG 1 cut(s) 1119
SalI GTCGAC 1 cut(s) 1740
SatI GCNGC 8 cut(s) 396, 467, 585, 1135, 1193, 1358, 1443, 1681
Sau3AI GATC 4 cut(s) 817, 905, 1296, 1660
Sau96I GGNCC 2 cut(s) 1514, 1648
ScaI AGTACT 1 cut(s) 371
SchI GAGTC 3 cut(s) 401, 998, 1709
ScrFI CCNGG 5 cut(s) 717, 1178, 1407, 1512, 1646
SduI GDGCHC 1 cut(s) 432
SexAI ACCWGGT 1 cut(s) 1176
SfaNI GCATC 5 cut(s) 87, 764, 798, 918, 1248
SfcI CTRYAG 1 cut(s) 312
Sfr303I CCGCGG 1 cut(s) 1119
SfuI TTCGAA 2 cut(s) 1240, 1271
SgrAI CRCCGGYG 1 cut(s) 1208
SgrBI CCGCGG 1 cut(s) 1119
SinI GGWCC 2 cut(s) 1514, 1648
SmlI CTYRAG 3 cut(s) 949, 1060, 1779
SmoI CTYRAG 3 cut(s) 949, 1060, 1779
SnaBI TACGTA 1 cut(s) 830
Sse9I AATT 8 cut(s) 18, 666, 1121, 1273, 1376, 1393, 1398, 1419
SspI AATATT 1 cut(s) 210
SspMI CTAG 1 cut(s) 75
StyD4I CCNGG 5 cut(s) 715, 1176, 1405, 1510, 1644
StyI CCWWGG 5 cut(s) 178, 590, 660, 1152, 1517
TaaI ACNGT 4 cut(s) 377, 607, 957, 1774
TaiI ACGT 4 cut(s) 143, 766, 832, 1371
TaqI TCGA 6 cut(s) 758, 887, 1125, 1240, 1271, 1741
TasI AATT 8 cut(s) 18, 666, 1121, 1273, 1376, 1393, 1398, 1419
TatI WGTACW 3 cut(s) 369, 597, 1143
TauI GCSGC 2 cut(s) 1360, 1445
TfiI GAWTC 9 cut(s) 164, 171, 748, 1127, 1157, 1237, 1336, 1348, 1468
TscAI CASTG 2 cut(s) 1026, 1104
TseFI GTSAC 1 cut(s) 316
TseI GCWGC 6 cut(s) 395, 466, 584, 1134, 1192, 1680
Tsp45I GTSAC 1 cut(s) 316
TspDTI ATGAA 2 cut(s) 174, 1066
TspGWI ACGGA 1 cut(s) 1021
TspRI CASTG 2 cut(s) 1026, 1104
Vha464I CTTAAG 1 cut(s) 949
VpaK11BI GGWCC 2 cut(s) 1514, 1648
VspI ATTAAT 1 cut(s) 450
XapI RAATTY 3 cut(s) 1121, 1273, 1393
XceI RCATGY 3 cut(s) 95, 548, 1748
XmiI GTMKAC 1 cut(s) 1741
XmnI GAANNNNTTC 1 cut(s) 1526
XspI CTAG 1 cut(s) 75
ZrmI AGTACT 1 cut(s) 371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.