pycom16g02470

Nicotinate-nucleotide pyrophosphorylase carboxylating

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
1606914 .. 1611859
4946 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1332 bp
ATGGCTGCGGGAAGAACTGGAAGCAGTGGCACGGCGCGGTATGTAGGACAAGGTAGGACGGCTGTAGGACGGTTTGACGGCTGTAGGACGGCTAGTGTAGGACAAGGTAGGACGGCTGTAGGACGGCTTATTCTTCTAATAATAATATTATATACAATTACACAAGAACTCCAACCATATTCCTTATTTTGTGATAAGAGATGGATTGCTCCTCTCGTTGTTTCTCTCTCTAAAACTCGGCCGCAACTGGTTCGATTCTCCACCCTCCTCCCCTCTTCTTCCGCCTTCGATCGCCAGTCAGCTTTATTTAAGGAGATGGGTTGCTCCTCTCGTTGTTTCTCTCTCCAAAACTCGTCCGCAACTGGTACGATTCTCCACCCTCCTCCCCTCTGCTTCCGCCTTCGATCGCCAGTCAGGAAGATTATTAGAATGTCAGCAACTCAAACAGAAAATCCCAGAATATCATTTGAATCCTTGCCAATACAACCTCCTTCACATCCGACCTATGATTTGTGGGGTGTCATCAAGTCAGCCATTGCTGAGGATGCTGGGGATCAAGGTGATGTGACATGTTTAGCTACCATTCCATCTCATATGGAAGTAGAAGCCCATTTCTTGGCAAAGGAGAATGGTATAATTGCTGGAATTGCACTTGCAGAGATGGTATTTTATGAAGTTGATCCATCTTTGAAGGTTGAGTGGTCTCAAAAGGACGGAGACTCTGTACATAAAGGCCTAGGTTTTGGAAAAGTTTATGGACGGGCACACAGTATTGTTGTAGCTGAGAGGGTAGCTCTGAATTTCATGCAGAGGATGAGCGGAGTAGCAACTTTAACTAAGGCAATGGCAGATCTTGCAAGTCCTGCATGTATTTTGGAGACGAGAAAAACTGCTCCGGATAATCATATATCAATTGCCGGAGGCATCACAAATGCCCTGAAATCTGTAGACCTGTATCTAGAGCAAGGGAATCTTCAGATGGATGTTGAGGTTGAGACCCGGACATTTGAGGAGATAGAAAAGGTATTGGAATATGCATCTCAAACAAAGACTTCCTTGACGCGTATAATGTTGGATAATATGGTTGTACCACTACCAAGTGGGGATGTTGATGTATCCATGCTCGAACAAGCTGTGAAATTGATTGATCGGAGATTCGAAACTGAGGCATCTGGTAATGTTACTCTTGAAACCGTACACAAGATTGGACAAACAGGGGTTGACTTCATTTCTAGTGGTGCACTGACTCATTCTGTAAAGGCTCTAGACATCTCCCTCAAGATTGATACGGAGTTGGCCCTTCAAGTGGGAAGGCGTACAAAACGGGCATGA

Protein Analysis

444

Amino Acids

48.24

Weight (kDa)

8.11

Isoelectric Point (pI)

39.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
QRPTase_N PF02749 188 - 273 2.1e-21 Quinolinate phosphoribosyl transferase, N-terminal domain
QRPTase_C PF01729 300 - 427 2.1e-25 Quinolinate phosphoribosyl transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 616
AccBSI CCGCTC 1 cut(s) 819
AccI GTMKAC 1 cut(s) 948
AccII CGCG 2 cut(s) 37, 1063
AccIII TCCGGA 1 cut(s) 895
AciI CCGC 7 cut(s) 8, 37, 242, 282, 357, 397, 819
AclWI GGATC 2 cut(s) 561, 674
AcoI YGGCCR 1 cut(s) 239
AcsI RAATTY 1 cut(s) 799
AcuI CTGAAG 1 cut(s) 959
AfaI GTAC 5 cut(s) 367, 726, 1089, 1197, 1318
AfiI CCNNNNNNNGG 2 cut(s) 616, 1306
AflIII ACRYGT 2 cut(s) 569, 1061
AgsI TTSAA 4 cut(s) 470, 691, 1190, 1304
AluBI AGCT 5 cut(s) 302, 578, 782, 794, 1133
AluI AGCT 5 cut(s) 302, 578, 782, 794, 1133
Alw21I GWGCWC 1 cut(s) 1243
Alw26I GTCTC 4 cut(s) 708, 711, 872, 989
Alw44I GTGCAC 1 cut(s) 1239
AlwI GGATC 2 cut(s) 561, 674
Aor13HI TCCGGA 1 cut(s) 895
AoxI GGCC 3 cut(s) 239, 733, 1296
ApaLI GTGCAC 1 cut(s) 1239
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 799
ArsI GACNNNNNNTTYG 2 cut(s) 493, 525
AspA2I CCTAGG 1 cut(s) 736
AspLEI GCGC 1 cut(s) 37
AspS9I GGNCC 1 cut(s) 1297
AsuC2I CCSGG 1 cut(s) 1000
AsuHPI GGTGA 1 cut(s) 572
AsuII TTCGAA 1 cut(s) 1158
AvrII CCTAGG 1 cut(s) 736
BaeGI GKGCMC 2 cut(s) 766, 1243
Bbv12I GWGCWC 1 cut(s) 1243
BbvCI CCTCAGC 1 cut(s) 540
BccI CCATC 6 cut(s) 195, 310, 595, 655, 691, 973
BceAI ACGGC 6 cut(s) 48, 75, 94, 105, 129, 140
BcgI CGANNNNNNTGC 2 cut(s) 233, 267
BciVI GTATCC 1 cut(s) 1126
BcnI CCSGG 1 cut(s) 1000
BcoDI GTCTC 4 cut(s) 708, 711, 872, 989
BfaI CTAG 5 cut(s) 93, 737, 959, 1233, 1265
BfmI CTRYAG 4 cut(s) 63, 82, 117, 945
BfuI GTATCC 1 cut(s) 1126
BglII AGATCT 1 cut(s) 850
BisI GCNGC 2 cut(s) 6, 242
BlnI CCTAGG 1 cut(s) 736
BlsI GCNGC 2 cut(s) 7, 243
Bme1390I CCNGG 1 cut(s) 1000
BmgT120I GGNCC 1 cut(s) 1297
BmrFI CCNGG 1 cut(s) 1000
BmsI GCATC 4 cut(s) 535, 933, 1046, 1178
BplI GAGNNNNNCTC 2 cut(s) 778, 810
Bpu10I CCTNAGC 1 cut(s) 540
Bpu14I TTCGAA 1 cut(s) 1158
BpuEI CTTGAG 1 cut(s) 1262
BpuMI CCSGG 1 cut(s) 1000
BsaI GGTCTC 2 cut(s) 708, 989
BsaJI CCNNGG 1 cut(s) 736
BsaWI WCCGGW 1 cut(s) 895
BsaXI ACNNNNNCTCC 4 cut(s) 153, 183, 708, 738
Bsc4I CCNNNNNNNGG 2 cut(s) 616, 1306
Bse1I ACTGG 5 cut(s) 22, 252, 295, 367, 410
Bse3DI GCAATG 2 cut(s) 534, 849
BseAI TCCGGA 1 cut(s) 895
BseDI CCNNGG 1 cut(s) 736
BseGI GGATG 5 cut(s) 496, 550, 819, 988, 1111
BseLI CCNNNNNNNGG 2 cut(s) 616, 1306
BseMI GCAATG 2 cut(s) 534, 849
BseMII CTCAG 3 cut(s) 531, 774, 1155
BseNI ACTGG 5 cut(s) 22, 252, 295, 367, 410
BseRI GAGGAG 5 cut(s) 201, 257, 316, 372, 1025
BseSI GKGCMC 2 cut(s) 766, 1243
BseX3I CGGCCG 1 cut(s) 239
BseYI CCCAGC 1 cut(s) 548
Bsh1236I CGCG 2 cut(s) 37, 1063
Bsh1285I CGRYCG 3 cut(s) 242, 292, 407
BshFI GGCC 3 cut(s) 241, 735, 1298
BsiEI CGRYCG 3 cut(s) 242, 292, 407
BsiHKAI GWGCWC 1 cut(s) 1243
BsiSI CCGG 3 cut(s) 896, 918, 1000
BslI CCNNNNNNNGG 2 cut(s) 616, 1306
BsmAI GTCTC 4 cut(s) 708, 711, 872, 989
BsmBI CGTCTC 1 cut(s) 872
BsnI GGCC 3 cut(s) 241, 735, 1298
Bso31I GGTCTC 2 cut(s) 708, 989
Bsp119I TTCGAA 1 cut(s) 1158
Bsp1286I GDGCHC 2 cut(s) 766, 1243
Bsp13I TCCGGA 1 cut(s) 895
Bsp1407I TGTACA 1 cut(s) 724
Bsp143I GATC 6 cut(s) 289, 404, 553, 679, 850, 1147
BspACI CCGC 7 cut(s) 8, 37, 242, 282, 357, 397, 819
BspANI GGCC 3 cut(s) 241, 735, 1298
BspCNI CTCAG 3 cut(s) 532, 775, 1156
BspEI TCCGGA 1 cut(s) 895
BspFNI CGCG 2 cut(s) 37, 1063
BspPI GGATC 2 cut(s) 561, 674
BspT104I TTCGAA 1 cut(s) 1158
BspTNI GGTCTC 2 cut(s) 708, 989
BsrBI CCGCTC 1 cut(s) 819
BsrDI GCAATG 2 cut(s) 534, 849
BsrGI TGTACA 1 cut(s) 724
BsrI ACTGG 5 cut(s) 22, 252, 295, 367, 410
BssECI CCNNGG 1 cut(s) 736
BssMI GATC 6 cut(s) 289, 404, 553, 679, 850, 1147
BssT1I CCWWGG 1 cut(s) 736
Bst4CI ACNGT 3 cut(s) 72, 770, 1195
Bst6I CTCTTC 1 cut(s) 280
BstAPI GCANNNNNTGC 2 cut(s) 854, 863
BstAUI TGTACA 1 cut(s) 724
BstBI TTCGAA 1 cut(s) 1158
BstDEI CTNAG 4 cut(s) 540, 783, 837, 1164
BstF5I GGATG 5 cut(s) 496, 550, 819, 988, 1111
BstFNI CGCG 2 cut(s) 37, 1063
BstHHI GCGC 1 cut(s) 37
BstKTI GATC 6 cut(s) 292, 407, 556, 682, 853, 1150
BstMAI GTCTC 4 cut(s) 708, 711, 872, 989
BstMBI GATC 6 cut(s) 289, 404, 553, 679, 850, 1147
BstMCI CGRYCG 3 cut(s) 242, 292, 407
BstMWI GCNNNNNNNGC 4 cut(s) 545, 647, 854, 863
BstNSI RCATGY 2 cut(s) 573, 870
BstSCI CCNGG 1 cut(s) 998
BstSFI CTRYAG 4 cut(s) 63, 82, 117, 945
BstSLI GKGCMC 2 cut(s) 766, 1243
BstUI CGCG 2 cut(s) 37, 1063
BstX2I RGATCY 1 cut(s) 850
BstYI RGATCY 1 cut(s) 850
BstZI CGGCCG 1 cut(s) 239
BsuI GTATCC 1 cut(s) 1126
BsuRI GGCC 3 cut(s) 241, 735, 1298
BtsCI GGATG 5 cut(s) 496, 550, 819, 988, 1111
BtsI GCAGTG 1 cut(s) 31
BtsIMutI CAGTG 2 cut(s) 31, 1241
CfoI GCGC 1 cut(s) 37
Cfr13I GGNCC 1 cut(s) 1297
CseI GACGC 1 cut(s) 1069
Csp6I GTAC 5 cut(s) 366, 725, 1088, 1196, 1317
CviAII CATG 5 cut(s) 570, 805, 867, 1120, 1329
CviQI GTAC 5 cut(s) 366, 725, 1088, 1196, 1317
DdeI CTNAG 4 cut(s) 540, 783, 837, 1164
DpnI GATC 6 cut(s) 291, 406, 555, 681, 852, 1149
DpnII GATC 6 cut(s) 289, 404, 553, 679, 850, 1147
EaeI YGGCCR 1 cut(s) 239
EagI CGGCCG 1 cut(s) 239
Eam1104I CTCTTC 1 cut(s) 280
EarI CTCTTC 1 cut(s) 280
EciI GGCGGA 2 cut(s) 271, 386
EclXI CGGCCG 1 cut(s) 239
Eco130I CCWWGG 1 cut(s) 736
Eco147I AGGCCT 1 cut(s) 735
Eco31I GGTCTC 2 cut(s) 708, 989
Eco52I CGGCCG 1 cut(s) 239
Eco57I CTGAAG 1 cut(s) 959
EcoT14I CCWWGG 1 cut(s) 736
EcoT22I ATGCAT 1 cut(s) 1039
ErhI CCWWGG 1 cut(s) 736
Esp3I CGTCTC 1 cut(s) 872
FaeI CATG 5 cut(s) 573, 808, 870, 1123, 1332
FalI AAGNNNNNCTT 4 cut(s) 957, 989, 1040, 1072
FatI CATG 5 cut(s) 569, 804, 866, 1119, 1328
FauNDI CATATG 1 cut(s) 594
FblI GTMKAC 1 cut(s) 948
Fnu4HI GCNGC 2 cut(s) 6, 242
FokI GGATG 5 cut(s) 483, 557, 826, 995, 1118
Fsp4HI GCNGC 2 cut(s) 6, 242
FspBI CTAG 5 cut(s) 93, 737, 959, 1233, 1265
GlaI GCGC 1 cut(s) 36
GluI GCNGC 2 cut(s) 6, 242
GsaI CCCAGC 1 cut(s) 552
HaeIII GGCC 3 cut(s) 241, 735, 1298
HapII CCGG 3 cut(s) 896, 918, 1000
HgaI GACGC 1 cut(s) 1069
HhaI GCGC 1 cut(s) 37
Hin1II CATG 5 cut(s) 573, 808, 870, 1123, 1332
Hin6I GCGC 1 cut(s) 35
HinP1I GCGC 1 cut(s) 35
HincII GTYRAC 1 cut(s) 1222
HindII GTYRAC 1 cut(s) 1222
HinfI GANTC 7 cut(s) 255, 370, 470, 719, 970, 1155, 1246
HpaII CCGG 3 cut(s) 896, 918, 1000
HphI GGTGA 1 cut(s) 572
Hpy166II GTNNAC 4 cut(s) 949, 1198, 1222, 1241
Hpy188I TCNGA 4 cut(s) 501, 798, 978, 1152
Hpy188III TCNNGA 6 cut(s) 415, 896, 959, 1187, 1265, 1279
Hpy8I GTNNAC 4 cut(s) 949, 1198, 1222, 1241
HpyAV CCTTC 6 cut(s) 295, 410, 501, 685, 1305, 1310
HpyCH4III ACNGT 3 cut(s) 72, 770, 1195
HpyCH4V TGCA 7 cut(s) 650, 656, 808, 857, 866, 1037, 1241
HpyF10VI GCNNNNNNNGC 4 cut(s) 545, 647, 854, 863
HpyF3I CTNAG 4 cut(s) 540, 783, 837, 1164
Hsp92II CATG 5 cut(s) 573, 808, 870, 1123, 1332
HspAI GCGC 1 cut(s) 35
Kpn2I TCCGGA 1 cut(s) 895
Kzo9I GATC 6 cut(s) 289, 404, 553, 679, 850, 1147
LmnI GCTCC 3 cut(s) 214, 329, 898
LweI GCATC 4 cut(s) 535, 933, 1046, 1178
MaeI CTAG 5 cut(s) 93, 737, 959, 1233, 1265
MaeIII GTNAC 2 cut(s) 565, 1180
MalI GATC 6 cut(s) 291, 406, 555, 681, 852, 1149
MbiI CCGCTC 1 cut(s) 819
MboI GATC 6 cut(s) 289, 404, 553, 679, 850, 1147
MboII GAAGA 6 cut(s) 24, 125, 267, 270, 430, 965
MfeI CAATTG 1 cut(s) 912
MflI RGATCY 1 cut(s) 850
MhlI GDGCHC 2 cut(s) 766, 1243
MluCI AATT 6 cut(s) 156, 636, 645, 799, 912, 1139
MluI ACGCGT 1 cut(s) 1061
MlyI GAGTC 2 cut(s) 713, 1240
MmeI TCCRAC 3 cut(s) 196, 524, 1053
Mph1103I ATGCAT 1 cut(s) 1039
MroI TCCGGA 1 cut(s) 895
MseI TTAA 2 cut(s) 309, 833
MspI CCGG 3 cut(s) 896, 918, 1000
MspR9I CCNGG 1 cut(s) 1000
MunI CAATTG 1 cut(s) 912
MvnI CGCG 2 cut(s) 37, 1063
MwoI GCNNNNNNNGC 4 cut(s) 545, 647, 854, 863
NciI CCSGG 1 cut(s) 1000
NdeI CATATG 1 cut(s) 594
NdeII GATC 6 cut(s) 289, 404, 553, 679, 850, 1147
NlaIII CATG 5 cut(s) 573, 808, 870, 1123, 1332
NmeAIII GCCGAG 1 cut(s) 217
NmuCI GTSAC 1 cut(s) 565
NsiI ATGCAT 1 cut(s) 1039
NspI RCATGY 2 cut(s) 573, 870
NspV TTCGAA 1 cut(s) 1158
PceI AGGCCT 1 cut(s) 735
PciI ACATGT 1 cut(s) 569
PfeI GAWTC 5 cut(s) 255, 370, 470, 970, 1155
PflMI CCANNNNNTGG 1 cut(s) 616
PkrI GCNGC 2 cut(s) 7, 243
Ple19I CGATCG 2 cut(s) 292, 407
PleI GAGTC 2 cut(s) 713, 1240
PpsI GAGTC 2 cut(s) 713, 1240
PscI ACATGT 1 cut(s) 569
PspFI CCCAGC 1 cut(s) 548
PspPI GGNCC 1 cut(s) 1297
PsuI RGATCY 1 cut(s) 850
PvuI CGATCG 2 cut(s) 292, 407
RsaI GTAC 5 cut(s) 367, 726, 1089, 1197, 1318
RsaNI GTAC 5 cut(s) 366, 725, 1088, 1196, 1317
SaqAI TTAA 2 cut(s) 309, 833
SatI GCNGC 2 cut(s) 6, 242
Sau3AI GATC 6 cut(s) 289, 404, 553, 679, 850, 1147
Sau96I GGNCC 1 cut(s) 1297
SchI GAGTC 2 cut(s) 713, 1240
ScrFI CCNGG 1 cut(s) 1000
SduI GDGCHC 2 cut(s) 766, 1243
SfaNI GCATC 4 cut(s) 535, 933, 1046, 1178
SfcI CTRYAG 4 cut(s) 63, 82, 117, 945
SfuI TTCGAA 1 cut(s) 1158
SmlI CTYRAG 1 cut(s) 1277
SmoI CTYRAG 1 cut(s) 1277
Sse9I AATT 6 cut(s) 156, 636, 645, 799, 912, 1139
SseBI AGGCCT 1 cut(s) 735
SsiI CCGC 7 cut(s) 8, 37, 242, 282, 357, 397, 819
SspI AATATT 1 cut(s) 147
SspMI CTAG 5 cut(s) 93, 737, 959, 1233, 1265
StuI AGGCCT 1 cut(s) 735
StyD4I CCNGG 1 cut(s) 998
StyI CCWWGG 1 cut(s) 736
TaaI ACNGT 3 cut(s) 72, 770, 1195
TaqI TCGA 5 cut(s) 253, 288, 403, 1125, 1158
TasI AATT 6 cut(s) 156, 636, 645, 799, 912, 1139
TatI WGTACW 1 cut(s) 724
TauI GCSGC 1 cut(s) 244
TfiI GAWTC 5 cut(s) 255, 370, 470, 970, 1155
Tru1I TTAA 2 cut(s) 309, 833
Tru9I TTAA 2 cut(s) 309, 833
TscAI CASTG 2 cut(s) 31, 1248
TseFI GTSAC 1 cut(s) 565
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 1 cut(s) 565
TspDTI ATGAA 3 cut(s) 687, 793, 1216
TspGWI ACGGA 2 cut(s) 729, 1304
TspRI CASTG 2 cut(s) 31, 1248
Van91I CCANNNNNTGG 1 cut(s) 616
VneI GTGCAC 1 cut(s) 1239
XapI RAATTY 1 cut(s) 799
XbaI TCTAGA 2 cut(s) 958, 1264
XceI RCATGY 2 cut(s) 573, 870
XmaJI CCTAGG 1 cut(s) 736
XmiI GTMKAC 1 cut(s) 948
XspI CTAG 5 cut(s) 93, 737, 959, 1233, 1265
Zsp2I ATGCAT 1 cut(s) 1039
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.