pycom16g14750

Carrier of the growing fatty acid chain in fatty acid biosynthesis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0002077
Physical Location & Seq
Forward (+)
10804404 .. 10807554
3151 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g14750.1

Sequence Viewer

Length: 414 bp
ATGGCTTCCCTCGCCCAAGCTTCTGCTGCCCTTTCCACCTCCTTCAAGCCCGCTTTGGCACCTGGCAGCAGGAGCTCTGGTTTCAAATCAGTTTCCTTTTCCGTCACTGGAAAGCGCTTTCCATCTCTCAGATCCCAACCTGGGCGCCTCCAAATTTCTTGTGCGGCCAAACCGGAGACTATCACCAAGGTGTGTAGCATAGTGAAGAAGCAGCTGGCTTTAGCTGAAGACGTGGATGTGTCTGCTGGCTCAAAGTTTTCAGAACTTGGTGCCGATTCTCTTGACACAGTTGAGATTGTGATGGGGCTTGAGGAGGCATTTGGCATCACCGTGGAGGAAGAAAATGCCCAGACCATCGCCACTGTTCAAGATGCAGCTGATCTGATTGAGGATCTCGTTGCGAAGAGTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PP-binding

Protein Analysis

138

Amino Acids

14.19

Weight (kDa)

4.83

Isoelectric Point (pI)

46.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP-binding PF00550 63 - 129 1.2e-10 Phosphopantetheine attachment site
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 58, 144, 269
AciI CCGC 2 cut(s) 51, 164
AclWI GGATC 2 cut(s) 126, 399
AcoI YGGCCR 1 cut(s) 165
AcsI RAATTY 1 cut(s) 153
AcuI CTGAAG 1 cut(s) 246
AcyI GRCGYC 1 cut(s) 145
AfeI AGCGCT 1 cut(s) 116
AfiI CCNNNNNNNGG 1 cut(s) 141
AgsI TTSAA 3 cut(s) 46, 85, 368
AjiI CACGTC 1 cut(s) 232
AjnI CCWGG 2 cut(s) 61, 139
AleI CACNNNNGTG 1 cut(s) 188
AluBI AGCT 5 cut(s) 20, 75, 214, 224, 377
AluI AGCT 5 cut(s) 20, 75, 214, 224, 377
Alw21I GWGCWC 1 cut(s) 77
Alw26I GTCTC 1 cut(s) 170
AlwI GGATC 2 cut(s) 126, 399
Aor51HI AGCGCT 1 cut(s) 116
AoxI GGCC 1 cut(s) 165
ApeKI GCWGC 4 cut(s) 26, 66, 211, 374
ApoI RAATTY 1 cut(s) 153
AspLEI GCGC 2 cut(s) 117, 147
AsuHPI GGTGA 2 cut(s) 175, 319
BanI GGYRCC 3 cut(s) 58, 144, 269
BanII GRGCYC 1 cut(s) 77
BbsI GAAGAC 1 cut(s) 234
Bbv12I GWGCWC 1 cut(s) 77
BbvI GCAGC 4 cut(s) 13, 78, 223, 386
BccI CCATC 3 cut(s) 130, 295, 362
BciT130I CCWGG 2 cut(s) 63, 141
BcoDI GTCTC 1 cut(s) 170
BfoI RGCGCY 2 cut(s) 118, 148
BisI GCNGC 5 cut(s) 27, 67, 165, 212, 375
BlsI GCNGC 5 cut(s) 28, 68, 166, 213, 376
Bme1390I CCNGG 2 cut(s) 63, 141
BmgBI CACGTC 1 cut(s) 232
BmiI GGNNCC 3 cut(s) 60, 146, 271
BmrFI CCNGG 2 cut(s) 63, 141
BmsI GCATC 2 cut(s) 333, 361
BpiI GAAGAC 1 cut(s) 234
BpuEI CTTGAG 1 cut(s) 329
BsaHI GRCGYC 1 cut(s) 145
BsaJI CCNNGG 3 cut(s) 140, 186, 330
BsaWI WCCGGW 1 cut(s) 172
BsaXI ACNNNNNCTCC 2 cut(s) 64, 94
Bsc4I CCNNNNNNNGG 1 cut(s) 141
Bse1I ACTGG 1 cut(s) 112
BseBI CCWGG 2 cut(s) 63, 141
BseDI CCNNGG 3 cut(s) 140, 186, 330
BseGI GGATG 1 cut(s) 241
BseLI CCNNNNNNNGG 1 cut(s) 141
BseMII CTCAG 1 cut(s) 142
BseNI ACTGG 1 cut(s) 112
BseRI GAGGAG 1 cut(s) 326
BseXI GCAGC 4 cut(s) 13, 78, 223, 386
BshFI GGCC 1 cut(s) 167
BshNI GGYRCC 3 cut(s) 58, 144, 269
BsiHKAI GWGCWC 1 cut(s) 77
BsiSI CCGG 1 cut(s) 173
BslI CCNNNNNNNGG 1 cut(s) 141
BsmAI GTCTC 1 cut(s) 170
BsnI GGCC 1 cut(s) 167
Bsp1286I GDGCHC 1 cut(s) 77
Bsp143I GATC 3 cut(s) 131, 379, 391
BspACI CCGC 2 cut(s) 51, 164
BspANI GGCC 1 cut(s) 167
BspCNI CTCAG 1 cut(s) 141
BspLI GGNNCC 3 cut(s) 60, 146, 271
BspPI GGATC 2 cut(s) 126, 399
BspT107I GGYRCC 3 cut(s) 58, 144, 269
BsrI ACTGG 1 cut(s) 112
BssECI CCNNGG 3 cut(s) 140, 186, 330
BssMI GATC 3 cut(s) 131, 379, 391
BssNI GRCGYC 1 cut(s) 145
BssT1I CCWWGG 1 cut(s) 186
Bst2UI CCWGG 2 cut(s) 63, 141
Bst4CI ACNGT 3 cut(s) 289, 331, 364
Bst6I CTCTTC 1 cut(s) 398
BstACI GRCGYC 1 cut(s) 145
BstC8I GCNNGC 3 cut(s) 51, 216, 247
BstDEI CTNAG 1 cut(s) 128
BstDSI CCRYGG 1 cut(s) 330
BstF5I GGATG 1 cut(s) 241
BstH2I RGCGCY 2 cut(s) 118, 148
BstHHI GCGC 2 cut(s) 117, 147
BstKTI GATC 3 cut(s) 134, 382, 394
BstMAI GTCTC 1 cut(s) 170
BstMBI GATC 3 cut(s) 131, 379, 391
BstMWI GCNNNNNNNGC 4 cut(s) 11, 26, 72, 407
BstNI CCWGG 2 cut(s) 63, 141
BstSCI CCNGG 2 cut(s) 61, 139
BstV1I GCAGC 4 cut(s) 13, 78, 223, 386
BstV2I GAAGAC 1 cut(s) 234
BstX2I RGATCY 2 cut(s) 131, 391
BstYI RGATCY 2 cut(s) 131, 391
BsuRI GGCC 1 cut(s) 167
BtgI CCRYGG 1 cut(s) 330
BtgZI GCGATG 1 cut(s) 340
BtrI CACGTC 1 cut(s) 232
BtsCI GGATG 1 cut(s) 241
BtsIMutI CAGTG 2 cut(s) 105, 360
Cac8I GCNNGC 3 cut(s) 51, 216, 247
CfoI GCGC 2 cut(s) 117, 147
DdeI CTNAG 1 cut(s) 128
DinI GGCGCC 1 cut(s) 146
DpnI GATC 3 cut(s) 133, 381, 393
DpnII GATC 3 cut(s) 131, 379, 391
EaeI YGGCCR 1 cut(s) 165
Eam1104I CTCTTC 1 cut(s) 398
EarI CTCTTC 1 cut(s) 398
Ecl136II GAGCTC 1 cut(s) 75
Eco130I CCWWGG 1 cut(s) 186
Eco24I GRGCYC 1 cut(s) 77
Eco47III AGCGCT 1 cut(s) 116
Eco53kI GAGCTC 1 cut(s) 75
Eco57I CTGAAG 1 cut(s) 246
EcoICRI GAGCTC 1 cut(s) 75
EcoRII CCWGG 2 cut(s) 61, 139
EcoT14I CCWWGG 1 cut(s) 186
EcoT38I GRGCYC 1 cut(s) 77
EgeI GGCGCC 1 cut(s) 146
EheI GGCGCC 1 cut(s) 146
ErhI CCWWGG 1 cut(s) 186
FaiI YATR 1 cut(s) 200
FauI CCCGC 1 cut(s) 58
Fnu4HI GCNGC 5 cut(s) 27, 67, 165, 212, 375
FokI GGATG 1 cut(s) 248
FriOI GRGCYC 1 cut(s) 77
Fsp4HI GCNGC 5 cut(s) 27, 67, 165, 212, 375
GlaI GCGC 2 cut(s) 116, 146
GluI GCNGC 5 cut(s) 27, 67, 165, 212, 375
HaeII RGCGCY 2 cut(s) 118, 148
HaeIII GGCC 1 cut(s) 167
HapII CCGG 1 cut(s) 173
HhaI GCGC 2 cut(s) 117, 147
Hin1I GRCGYC 1 cut(s) 145
Hin6I GCGC 2 cut(s) 115, 145
HinP1I GCGC 2 cut(s) 115, 145
HindIII AAGCTT 1 cut(s) 18
HinfI GANTC 1 cut(s) 275
HpaII CCGG 1 cut(s) 173
HphI GGTGA 2 cut(s) 175, 319
Hpy188I TCNGA 3 cut(s) 131, 262, 384
Hpy188III TCNNGA 2 cut(s) 281, 368
HpyAV CCTTC 1 cut(s) 52
HpyCH4III ACNGT 3 cut(s) 289, 331, 364
HpyCH4IV ACGT 1 cut(s) 231
HpyCH4V TGCA 1 cut(s) 374
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 26, 72, 407
HpyF3I CTNAG 1 cut(s) 128
HpySE526I ACGT 1 cut(s) 231
Hsp92I GRCGYC 1 cut(s) 145
HspAI GCGC 2 cut(s) 115, 145
KasI GGCGCC 1 cut(s) 144
Kzo9I GATC 3 cut(s) 131, 379, 391
LmnI GCTCC 1 cut(s) 72
Lsp1109I GCAGC 4 cut(s) 13, 78, 223, 386
LweI GCATC 2 cut(s) 333, 361
MaeII ACGT 1 cut(s) 231
MaeIII GTNAC 1 cut(s) 103
MalI GATC 3 cut(s) 133, 381, 393
MboI GATC 3 cut(s) 131, 379, 391
MboII GAAGA 3 cut(s) 217, 239, 350
MflI RGATCY 2 cut(s) 131, 391
MhlI GDGCHC 1 cut(s) 77
MluCI AATT 1 cut(s) 153
Mly113I GGCGCC 1 cut(s) 145
MnlI CCTC 7 cut(s) 20, 49, 158, 304, 307, 328, 382
MseI TTAA 1 cut(s) 412
MslI CAYNNNNRTG 2 cut(s) 188, 329
MspA1I CMGCKG 2 cut(s) 214, 377
MspI CCGG 1 cut(s) 173
MspR9I CCNGG 2 cut(s) 63, 141
MvaI CCWGG 2 cut(s) 63, 141
MwoI GCNNNNNNNGC 4 cut(s) 11, 26, 72, 407
NarI GGCGCC 1 cut(s) 145
NdeII GATC 3 cut(s) 131, 379, 391
NlaIV GGNNCC 3 cut(s) 60, 146, 271
NmuCI GTSAC 1 cut(s) 103
OliI CACNNNNGTG 1 cut(s) 188
PfeI GAWTC 1 cut(s) 275
PkrI GCNGC 5 cut(s) 28, 68, 166, 213, 376
PluTI GGCGCC 1 cut(s) 148
Psp124BI GAGCTC 1 cut(s) 77
Psp6I CCWGG 2 cut(s) 61, 139
PspGI CCWGG 2 cut(s) 61, 139
PspN4I GGNNCC 3 cut(s) 60, 146, 271
PsuI RGATCY 2 cut(s) 131, 391
PvuII CAGCTG 2 cut(s) 214, 377
RseI CAYNNNNRTG 2 cut(s) 188, 329
SacI GAGCTC 1 cut(s) 77
SaqAI TTAA 1 cut(s) 412
SatI GCNGC 5 cut(s) 27, 67, 165, 212, 375
Sau3AI GATC 3 cut(s) 131, 379, 391
ScrFI CCNGG 2 cut(s) 63, 141
SduI GDGCHC 1 cut(s) 77
SfaNI GCATC 2 cut(s) 333, 361
SfoI GGCGCC 1 cut(s) 146
SmiMI CAYNNNNRTG 2 cut(s) 188, 329
SmlI CTYRAG 1 cut(s) 308
SmoI CTYRAG 1 cut(s) 308
Sse9I AATT 1 cut(s) 153
SsiI CCGC 2 cut(s) 51, 164
SspDI GGCGCC 1 cut(s) 144
SstI GAGCTC 1 cut(s) 77
StyD4I CCNGG 2 cut(s) 61, 139
StyI CCWWGG 1 cut(s) 186
TaaI ACNGT 3 cut(s) 289, 331, 364
TaiI ACGT 1 cut(s) 234
TasI AATT 1 cut(s) 153
TauI GCSGC 1 cut(s) 167
TfiI GAWTC 1 cut(s) 275
Tru1I TTAA 1 cut(s) 412
Tru9I TTAA 1 cut(s) 412
TscAI CASTG 2 cut(s) 112, 367
TseFI GTSAC 1 cut(s) 103
TseI GCWGC 4 cut(s) 26, 66, 211, 374
Tsp45I GTSAC 1 cut(s) 103
TspGWI ACGGA 1 cut(s) 91
TspRI CASTG 2 cut(s) 112, 367
XapI RAATTY 1 cut(s) 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.