Rorug04G0166600

Carrier of the growing fatty acid chain in fatty acid biosynthesis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0002077
Physical Location & Seq
Reverse (-)
29201467 .. 29204235
2769 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0166600.1

Sequence Viewer

Length: 2349 bp
ATGGCATTTCCAAGAATCTCCAAGACTCATCAAAACCTCTGGAAATCAATAAACCCCATCAACCCAACTGCGTTCTTTTCCCTCATCTTCACCAACAACCACACGCCCTCATCGAATTCACCCAGACCCATTTGCACCAGAACCCACGGTGACCCTTTTCTTCCTAATCCAGACGTGGGCCACGTCGCCGATGGTCTCATTTCCATCTTCACCAAGCAACCTTTCTCCCCAGACAACCCAGATTTGAAGCATTTTGCTTCAAGAATCACCCCAAAAGCAGTCGAATGTGTGCTGAATGGCCTCAAGAGCTGGAAGCTAGCTCACTTGTTCTTCACCTGGGCGTCAAACCAATGTGGGTACAAGCACAATTGCTATACCTACAATGCCATGGCTTCACACCTATCACGTGCTCGACAAAATGCCCCAATGAGAGCCCTGGCCATGGAAGTTGTGGATTCCAATTGTTATATGACCCCTGGAGCTTTGGGTTTCTTTCTAAGATGCTTAGGGAGTGTGGAGTTGGTTGAAGAAGCCAACATTTTGTTTGATCAAGTTTGTACAAAGGGTCTTTGTGTTCCAAATAGCTATAGCTATAACTGTTTGTTGGAGGCTATATCCAAGTCTGGTTCGATTGAGTTGCTCGAGAAGCGAATGAAAGAAATGGGGGATTCTGGTTTGGAATTCGATAGGTACACATTGACTGCGGCGTTGAAGGTTTATTGCAATGCAGGGAAGTTCGAAAAGGCTTTGAATGTTTACAATGAGATGCATGAGAAGAGCTGGGTGGATGCACATGCCTTGTCTATCTTGGTGTTGCATTTGAGCAAGTCGGGTGAGGTGGACAAGGCTTCTGATTTGATTGAAAGAATGGAACGTCGCAATCTTGGCTTGAATGACAAGACATTTCGTGTTTTGATTCATGGGTTTGTGAGGGAGTCCAGAGTGGATAAGGCCCTCCAACTGTTTGATAAAATGCGGAAGTCAGGTTTCTCTGTTGACATTTCTCTTTATGATGTACTGATTGGAGGGCTCTGTAAGAATAGAGAGATTGAGAAAGCCTTGTCTATGTATTCGGAAATGAAGGATTTGGGAATCCATTCTGATGTTAGAGTCCTTACGAAGCTCATATTAGCTTGTTCTGATGAAAGGGAAATGATTCAGATGCTTGAGGAAAGTCAGGAAGATTTAAATGAAGAGGATATGCTTTTGCTTTGCAGTTCTGTGCTGAATAGTCTGGTTAATAACAACTCCATTGACAGAGCTTATCGACTGCTTCAGGCAATGATGAAAAAAGAATCTGATGCTGATCCAGTAGTAAAGAAAAAGGTTCGTCCTGCCACCCGTTCATTTGAAATTGTTATTGATGGCCTTCTAAAATTTGGTAAGTTGGCCGTGGCATTAAGCCTTTTGGAAGATATGAATCAGATTGGGTGTAAACCAAATGTAGTAATTTACAATAATGTAATTGATGAACTGTGCAAATCAAATAGATTGGAGGAAAGTTATAAGCTTCTGAGAGAGATGGAGCAATCTGGAGTTGAACCAACACATTTTACCCGTAACTCGATATATGGTTGCCACTGTAGAAGAGAGGATGTTCAAGGAGCCCTTAACCTAGTGAAGGAGATGCGTGTTTGTGGACATGAACCATGGAAAAAACATTCCACCTTGCTCGTGAAGCAGTTGTGCGAACATGGAAAGGCAGCTGAAGCTTGTAATTTTCTTGATAAAATGGTTGAAGTAAGTTTTGTCCCTCGTCTAGTTTCCTATTCTGCGGTTATTAGTGGATTACTCAAAATTCAAGAAGTAGATCGAGCTTTACAGCTGTTTCAGGACATCTGTGCTGATGGCTATTGTCCTGATGTAGTTTTCTATAACATATTGATAAATGGTCTGTGTAAGGCCAAAAGAGTCTCGGAAGCAGAAAACTTTCTGAAGGAGATGGTCATGAAGGGGCTTGTTCCCTCAGTTGTAACCTACAATCTGCTGATAAATGGATATTGTAAAAACGGTGATGTAGATAAAGCCATGATGTGCCTCTCCAGGATCTTTGATGAAGCCAGAGAACCTAACGTGATTACATACACCACGTTAATAGACGGATTATGCAATGCTGGAAGGATTGATGATGCTCTTATGCTTTGGAATGACATGGCGAAGAAAGGATGTGCTCCAAACAGAATTGCATTTATGGCTCTTATTAACGGTCTTTCCAAGTGTGGTAAGCCTGCTGAGGCTTTAGCCTATCTTCGTGAGATGGAAGAGAAGGAAATGAAACCTGGGATACATGTATATTCAGCAGTAATAAGTTATTTAATCTCTAATTTAAACCTTCCCCCTGCCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PP-binding

Protein Analysis

782

Amino Acids

87.95

Weight (kDa)

7.0

Isoelectric Point (pI)

33.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 193 - 242 1.2e-06 PPR repeat family
TPR_24 PF23276 202 - 324 8.5e-08 Fungal tetratrico peptide repeats
PPR_2 PF13041 268 - 311 1.2e-06 PPR repeat family
PPR PF01535 301 - 330 3.5e-06 PPR repeat
PPR_2 PF13041 305 - 345 2.7e-08 PPR repeat family
PPR_2 PF13041 333 - 379 2.4e-08 PPR repeat family
PPR PF01535 337 - 365 2.2e-06 PPR repeat
PPR_1 PF12854 477 - 509 8.8e-11 PPR repeat
PPR_2 PF13041 480 - 529 1.7e-12 PPR repeat family
PPR_long PF17177 598 - 690 6.4e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 609 - 669 3.7e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 616 - 649 6.3e-13 PPR repeat
PPR_2 PF13041 620 - 666 8.3e-16 PPR repeat family
PPR PF01535 623 - 653 1.8e-07 PPR repeat
PPR_1 PF12854 651 - 677 3.2e-12 PPR repeat
PPR_2 PF13041 655 - 704 1.1e-17 PPR repeat family
PPR PF01535 658 - 682 2.3e-07 PPR repeat
PPR_1 PF12854 689 - 718 5.2e-13 PPR repeat
PPR_3 PF13812 689 - 735 6.6e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 690 - 739 7.8e-17 PPR repeat family
PPR PF01535 693 - 723 1.9e-08 PPR repeat
PPR_2 PF13041 725 - 770 2.3e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1506
AciI CCGC 3 cut(s) 704, 976, 1775
AclWI GGATC 2 cut(s) 1301, 2054
AcoI YGGCCR 2 cut(s) 438, 1389
AcsI RAATTY 4 cut(s) 115, 680, 1376, 1797
AcuI CTGAAG 3 cut(s) 1259, 1728, 1955
AcvI CACGTG 1 cut(s) 407
AcyI GRCGYC 1 cut(s) 341
AfaI GTAC 4 cut(s) 359, 559, 692, 1017
AfiI CCNNNNNNNGG 3 cut(s) 176, 442, 1621
AflIII ACRYGT 1 cut(s) 2287
AjiI CACGTC 2 cut(s) 175, 184
AjnI CCWGG 5 cut(s) 335, 435, 475, 2042, 2278
AjuI GAANNNNNNNTTGG 2 cut(s) 206, 238
Alw21I GWGCWC 2 cut(s) 412, 2173
Alw26I GTCTC 2 cut(s) 200, 1918
AlwI GGATC 2 cut(s) 1301, 2054
Ama87I CYCGRG 1 cut(s) 641
AoxI GGCC 7 cut(s) 178, 298, 438, 951, 1366, 1389, 1902
ApeKI GCWGC 1 cut(s) 1703
ApoI RAATTY 4 cut(s) 115, 680, 1376, 1797
Asp700I GAANNNNTTC 3 cut(s) 1096, 1155, 1929
AspS9I GGNCC 2 cut(s) 178, 952
AsuHPI GGTGA 8 cut(s) 82, 111, 161, 202, 259, 325, 845, 2024
AsuII TTCGAA 1 cut(s) 738
AsuNHI GCTAGC 1 cut(s) 316
AvaI CYCGRG 1 cut(s) 641
BalI TGGCCA 1 cut(s) 440
BanII GRGCYC 3 cut(s) 436, 1032, 1609
BauI CACGAG 1 cut(s) 1673
BbrPI CACGTG 1 cut(s) 407
Bbv12I GWGCWC 2 cut(s) 412, 2173
BbvCI CCTCAGC 1 cut(s) 2232
BbvI GCAGC 1 cut(s) 1715
BccI CCATC 8 cut(s) 65, 185, 212, 1358, 1516, 1841, 1936, 2251
BceAI ACGGC 1 cut(s) 1376
BcgI CGANNNNNNTGC 2 cut(s) 619, 653
BciT130I CCWGG 5 cut(s) 337, 437, 477, 2044, 2280
BciVI GTATCC 1 cut(s) 2277
BclI TGATCA 1 cut(s) 547
BcoDI GTCTC 2 cut(s) 200, 1918
BfaI CTAG 3 cut(s) 317, 1616, 1760
BfmI CTRYAG 2 cut(s) 586, 1582
BfuI GTATCC 1 cut(s) 2277
BisI GCNGC 2 cut(s) 705, 1704
BlsI GCNGC 2 cut(s) 706, 1705
Bme1390I CCNGG 5 cut(s) 337, 437, 477, 2044, 2280
BmeT110I CYCGRG 1 cut(s) 641
BmgBI CACGTC 2 cut(s) 175, 184
BmgT120I GGNCC 2 cut(s) 178, 952
BmiI GGNNCC 1 cut(s) 1606
BmrFI CCNGG 5 cut(s) 337, 437, 477, 2044, 2280
BmsI GCATC 7 cut(s) 491, 756, 778, 1152, 1291, 1617, 2119
BmtI GCTAGC 1 cut(s) 320
BpmI CTGGAG 3 cut(s) 498, 1554, 2026
Bpu10I CCTNAGC 2 cut(s) 505, 2232
Bpu14I TTCGAA 1 cut(s) 738
BpuEI CTTGAG 2 cut(s) 287, 1187
BsaAI YACGTR 1 cut(s) 407
BsaBI GATNNNNATC 2 cut(s) 1305, 1419
BsaHI GRCGYC 1 cut(s) 341
BsaI GGTCTC 1 cut(s) 200
BsaJI CCNNGG 9 cut(s) 145, 336, 387, 435, 441, 475, 1392, 1649, 2279
Bsc4I CCNNNNNNNGG 3 cut(s) 176, 442, 1621
Bse1I ACTGG 1 cut(s) 1310
Bse3DI GCAATG 3 cut(s) 730, 1287, 2116
Bse8I GATNNNNATC 2 cut(s) 1305, 1419
BseBI CCWGG 5 cut(s) 337, 437, 477, 2044, 2280
BseDI CCNNGG 9 cut(s) 145, 336, 387, 435, 441, 475, 1392, 1649, 2279
BseGI GGATG 3 cut(s) 793, 1600, 2171
BseJI GATNNNNATC 2 cut(s) 1305, 1419
BseLI CCNNNNNNNGG 3 cut(s) 176, 442, 1621
BseMI GCAATG 3 cut(s) 730, 1287, 2116
BseMII CTCAG 3 cut(s) 1505, 1980, 2223
BseNI ACTGG 1 cut(s) 1310
BseXI GCAGC 1 cut(s) 1715
BseYI CCCAGC 1 cut(s) 780
BshFI GGCC 7 cut(s) 180, 300, 440, 953, 1368, 1391, 1904
BsiHKAI GWGCWC 2 cut(s) 412, 2173
BsiHKCI CYCGRG 1 cut(s) 641
BslFI GGGAC 1 cut(s) 1736
BslI CCNNNNNNNGG 3 cut(s) 176, 442, 1621
BsmAI GTCTC 2 cut(s) 200, 1918
BsmFI GGGAC 1 cut(s) 1736
BsnI GGCC 7 cut(s) 180, 300, 440, 953, 1368, 1391, 1904
Bso31I GGTCTC 1 cut(s) 200
BsoBI CYCGRG 1 cut(s) 641
Bsp119I TTCGAA 1 cut(s) 738
Bsp1286I GDGCHC 5 cut(s) 412, 436, 1032, 1609, 2173
Bsp1407I TGTACA 1 cut(s) 557
Bsp143I GATC 4 cut(s) 547, 1306, 1810, 2046
Bsp19I CCATGG 3 cut(s) 387, 441, 1649
BspACI CCGC 3 cut(s) 704, 976, 1775
BspANI GGCC 7 cut(s) 180, 300, 440, 953, 1368, 1391, 1904
BspCNI CTCAG 3 cut(s) 1506, 1979, 2224
BspHI TCATGA 1 cut(s) 1947
BspLI GGNNCC 1 cut(s) 1606
BspOI GCTAGC 1 cut(s) 320
BspPI GGATC 2 cut(s) 1301, 2054
BspQI GCTCTTC 1 cut(s) 770
BspT104I TTCGAA 1 cut(s) 738
BspTNI GGTCTC 1 cut(s) 200
BsrDI GCAATG 3 cut(s) 730, 1287, 2116
BsrGI TGTACA 1 cut(s) 557
BsrI ACTGG 1 cut(s) 1310
BssECI CCNNGG 9 cut(s) 145, 336, 387, 435, 441, 475, 1392, 1649, 2279
BssMI GATC 4 cut(s) 547, 1306, 1810, 2046
BssNI GRCGYC 1 cut(s) 341
BssSI CACGAG 1 cut(s) 1673
BssT1I CCWWGG 3 cut(s) 387, 441, 1649
Bst2BI CACGAG 1 cut(s) 1673
Bst2UI CCWGG 5 cut(s) 337, 437, 477, 2044, 2280
Bst4CI ACNGT 7 cut(s) 149, 599, 963, 1476, 1583, 2012, 2207
Bst6I CTCTTC 4 cut(s) 770, 1188, 1582, 2256
BstACI GRCGYC 1 cut(s) 341
BstAUI TGTACA 1 cut(s) 557
BstBAI YACGTR 1 cut(s) 407
BstBI TTCGAA 1 cut(s) 738
BstC8I GCNNGC 2 cut(s) 318, 2229
BstDEI CTNAG 5 cut(s) 497, 505, 1514, 1966, 2232
BstDSI CCRYGG 5 cut(s) 145, 387, 441, 1392, 1649
BstEII GGTNACC 1 cut(s) 149
BstENI CCTNNNNNAGG 1 cut(s) 1619
BstF5I GGATG 3 cut(s) 793, 1600, 2171
BstKTI GATC 4 cut(s) 550, 1309, 1813, 2049
BstMAI GTCTC 2 cut(s) 200, 1918
BstMBI GATC 4 cut(s) 547, 1306, 1810, 2046
BstMWI GCNNNNNNNGC 6 cut(s) 306, 646, 885, 1678, 1709, 2192
BstNI CCWGG 5 cut(s) 337, 437, 477, 2044, 2280
BstNSI RCATGY 2 cut(s) 797, 2291
BstPI GGTNACC 1 cut(s) 149
BstSCI CCNGG 5 cut(s) 335, 435, 475, 2042, 2278
BstSFI CTRYAG 2 cut(s) 586, 1582
BstV1I GCAGC 1 cut(s) 1715
BstX2I RGATCY 1 cut(s) 2046
BstYI RGATCY 1 cut(s) 2046
BsuI GTATCC 1 cut(s) 2277
BsuRI GGCC 7 cut(s) 180, 300, 440, 953, 1368, 1391, 1904
BtgI CCRYGG 5 cut(s) 145, 387, 441, 1392, 1649
BtrI CACGTC 2 cut(s) 175, 184
BtsCI GGATG 3 cut(s) 793, 1600, 2171
BtsIMutI CAGTG 1 cut(s) 1579
Cac8I GCNNGC 2 cut(s) 318, 2229
CciI TCATGA 1 cut(s) 1947
Cfr13I GGNCC 2 cut(s) 178, 952
CseI GACGC 1 cut(s) 330
Csp6I GTAC 4 cut(s) 358, 558, 691, 1016
CviQI GTAC 4 cut(s) 358, 558, 691, 1016
DdeI CTNAG 5 cut(s) 497, 505, 1514, 1966, 2232
DpnI GATC 4 cut(s) 549, 1308, 1812, 2048
DpnII GATC 4 cut(s) 547, 1306, 1810, 2046
DraI TTTAAA 2 cut(s) 1188, 2328
EaeI YGGCCR 2 cut(s) 438, 1389
Eam1104I CTCTTC 4 cut(s) 770, 1188, 1582, 2256
EarI CTCTTC 4 cut(s) 770, 1188, 1582, 2256
Eco130I CCWWGG 3 cut(s) 387, 441, 1649
Eco24I GRGCYC 3 cut(s) 436, 1032, 1609
Eco31I GGTCTC 1 cut(s) 200
Eco57I CTGAAG 3 cut(s) 1259, 1728, 1955
Eco72I CACGTG 1 cut(s) 407
Eco88I CYCGRG 1 cut(s) 641
Eco91I GGTNACC 1 cut(s) 149
EcoNI CCTNNNNNAGG 1 cut(s) 1619
EcoO109I RGGNCCY 1 cut(s) 952
EcoO65I GGTNACC 1 cut(s) 149
EcoRI GAATTC 2 cut(s) 115, 680
EcoRII CCWGG 5 cut(s) 335, 435, 475, 2042, 2278
EcoT14I CCWWGG 3 cut(s) 387, 441, 1649
EcoT22I ATGCAT 1 cut(s) 771
EcoT38I GRGCYC 3 cut(s) 436, 1032, 1609
ErhI CCWWGG 3 cut(s) 387, 441, 1649
FalI AAGNNNNNCTT 2 cut(s) 1593, 1625
FaqI GGGAC 1 cut(s) 1736
FbaI TGATCA 1 cut(s) 547
Fnu4HI GCNGC 2 cut(s) 705, 1704
FokI GGATG 3 cut(s) 800, 1607, 2178
FriOI GRGCYC 3 cut(s) 436, 1032, 1609
Fsp4HI GCNGC 2 cut(s) 705, 1704
FspBI CTAG 3 cut(s) 317, 1616, 1760
GluI GCNGC 2 cut(s) 705, 1704
GsaI CCCAGC 1 cut(s) 784
GsuI CTGGAG 3 cut(s) 498, 1554, 2026
HaeIII GGCC 7 cut(s) 180, 300, 440, 953, 1368, 1391, 1904
HgaI GACGC 1 cut(s) 330
Hin1I GRCGYC 1 cut(s) 341
HincII GTYRAC 1 cut(s) 997
HindII GTYRAC 1 cut(s) 997
HindIII AAGCTT 2 cut(s) 1508, 1710
HphI GGTGA 8 cut(s) 82, 111, 161, 202, 259, 325, 845, 2024
Hpy166II GTNNAC 6 cut(s) 693, 757, 841, 997, 1436, 1640
Hpy8I GTNNAC 6 cut(s) 693, 757, 841, 997, 1436, 1640
Hpy99I CGWCG 2 cut(s) 188, 879
HpyAV CCTTC 9 cut(s) 706, 1075, 1379, 1615, 1930, 1945, 2112, 2260, 2342
HpyCH4III ACNGT 7 cut(s) 149, 599, 963, 1476, 1583, 2012, 2207
HpyCH4IV ACGT 6 cut(s) 174, 183, 406, 874, 2073, 2090
HpyF10VI GCNNNNNNNGC 6 cut(s) 306, 646, 885, 1678, 1709, 2192
HpyF3I CTNAG 5 cut(s) 497, 505, 1514, 1966, 2232
HpySE526I ACGT 6 cut(s) 174, 183, 406, 874, 2073, 2090
Hsp92I GRCGYC 1 cut(s) 341
Ksp22I TGATCA 1 cut(s) 547
Kzo9I GATC 4 cut(s) 547, 1306, 1810, 2046
LguI GCTCTTC 1 cut(s) 770
LmnI GCTCC 4 cut(s) 479, 1525, 1604, 2176
Lsp1109I GCAGC 1 cut(s) 1715
LweI GCATC 7 cut(s) 491, 756, 778, 1152, 1291, 1617, 2119
MaeI CTAG 3 cut(s) 317, 1616, 1760
MaeII ACGT 6 cut(s) 174, 183, 406, 874, 2073, 2090
MaeIII GTNAC 3 cut(s) 149, 1559, 1972
MalI GATC 4 cut(s) 549, 1308, 1812, 2048
MboI GATC 4 cut(s) 547, 1306, 1810, 2046
MfeI CAATTG 2 cut(s) 367, 460
MflI RGATCY 1 cut(s) 2046
MhlI GDGCHC 5 cut(s) 412, 436, 1032, 1609, 2173
MlsI TGGCCA 1 cut(s) 440
MluNI TGGCCA 1 cut(s) 440
MlyI GAGTC 4 cut(s) 19, 944, 1119, 1920
MmeI TCCRAC 2 cut(s) 585, 982
Mox20I TGGCCA 1 cut(s) 440
Mph1103I ATGCAT 1 cut(s) 771
MroXI GAANNNNTTC 3 cut(s) 1096, 1155, 1929
MscI TGGCCA 1 cut(s) 440
MseI TTAA 8 cut(s) 1187, 1239, 1400, 1611, 2093, 2202, 2315, 2327
MslI CAYNNNNRTG 1 cut(s) 1101
Msp20I TGGCCA 1 cut(s) 440
MspA1I CMGCKG 2 cut(s) 1706, 1825
MspR9I CCNGG 5 cut(s) 337, 437, 477, 2044, 2280
MunI CAATTG 2 cut(s) 367, 460
MvaI CCWGG 5 cut(s) 337, 437, 477, 2044, 2280
MwoI GCNNNNNNNGC 6 cut(s) 306, 646, 885, 1678, 1709, 2192
NcoI CCATGG 3 cut(s) 387, 441, 1649
NdeII GATC 4 cut(s) 547, 1306, 1810, 2046
NheI GCTAGC 1 cut(s) 316
NlaIV GGNNCC 1 cut(s) 1606
NmuCI GTSAC 1 cut(s) 149
NsiI ATGCAT 1 cut(s) 771
NspI RCATGY 2 cut(s) 797, 2291
NspV TTCGAA 1 cut(s) 738
PaeR7I CTCGAG 1 cut(s) 641
PagI TCATGA 1 cut(s) 1947
PciI ACATGT 1 cut(s) 2287
PciSI GCTCTTC 1 cut(s) 770
PcsI WCGNNNNNNNCGW 2 cut(s) 110, 180
PdmI GAANNNNTTC 3 cut(s) 1096, 1155, 1929
PfeI GAWTC 9 cut(s) 15, 264, 455, 668, 916, 1092, 1156, 1295, 1420
PfoI TCCNGGA 1 cut(s) 2042
PkrI GCNGC 2 cut(s) 706, 1705
PleI GAGTC 4 cut(s) 19, 943, 1118, 1919
PmaCI CACGTG 1 cut(s) 407
PmlI CACGTG 1 cut(s) 407
PpsI GAGTC 4 cut(s) 19, 943, 1118, 1919
Ppu21I YACGTR 1 cut(s) 407
PscI ACATGT 1 cut(s) 2287
PsiI TTATAA 1 cut(s) 1506
Psp6I CCWGG 5 cut(s) 335, 435, 475, 2042, 2278
PspCI CACGTG 1 cut(s) 407
PspEI GGTNACC 1 cut(s) 149
PspFI CCCAGC 1 cut(s) 780
PspGI CCWGG 5 cut(s) 335, 435, 475, 2042, 2278
PspN4I GGNNCC 1 cut(s) 1606
PspPI GGNCC 2 cut(s) 178, 952
PsuI RGATCY 1 cut(s) 2046
PvuII CAGCTG 2 cut(s) 1706, 1825
RsaI GTAC 4 cut(s) 359, 559, 692, 1017
RsaNI GTAC 4 cut(s) 358, 558, 691, 1016
RseI CAYNNNNRTG 1 cut(s) 1101
SapI GCTCTTC 1 cut(s) 770
SaqAI TTAA 8 cut(s) 1187, 1239, 1400, 1611, 2093, 2202, 2315, 2327
SatI GCNGC 2 cut(s) 705, 1704
Sau3AI GATC 4 cut(s) 547, 1306, 1810, 2046
Sau96I GGNCC 2 cut(s) 178, 952
SchI GAGTC 4 cut(s) 19, 944, 1119, 1920
ScrFI CCNGG 5 cut(s) 337, 437, 477, 2044, 2280
SduI GDGCHC 5 cut(s) 412, 436, 1032, 1609, 2173
SfaNI GCATC 7 cut(s) 491, 756, 778, 1152, 1291, 1617, 2119
SfcI CTRYAG 2 cut(s) 586, 1582
Sfr274I CTCGAG 1 cut(s) 641
SfuI TTCGAA 1 cut(s) 738
SlaI CTCGAG 1 cut(s) 641
SmiI ATTTAAAT 1 cut(s) 1188
SmiMI CAYNNNNRTG 1 cut(s) 1101
SmlI CTYRAG 3 cut(s) 302, 641, 1166
SmoI CTYRAG 3 cut(s) 302, 641, 1166
SsiI CCGC 3 cut(s) 704, 976, 1775
SspMI CTAG 3 cut(s) 317, 1616, 1760
StyD4I CCNGG 5 cut(s) 335, 435, 475, 2042, 2278
StyI CCWWGG 3 cut(s) 387, 441, 1649
SwaI ATTTAAAT 1 cut(s) 1188
TaaI ACNGT 7 cut(s) 149, 599, 963, 1476, 1583, 2012, 2207
TaiI ACGT 6 cut(s) 177, 186, 409, 877, 2076, 2093
TatI WGTACW 2 cut(s) 557, 1015
TauI GCSGC 1 cut(s) 707
TfiI GAWTC 9 cut(s) 15, 264, 455, 668, 916, 1092, 1156, 1295, 1420
Tru1I TTAA 8 cut(s) 1187, 1239, 1400, 1611, 2093, 2202, 2315, 2327
Tru9I TTAA 8 cut(s) 1187, 1239, 1400, 1611, 2093, 2202, 2315, 2327
TscAI CASTG 1 cut(s) 1586
TseFI GTSAC 1 cut(s) 149
TseI GCWGC 1 cut(s) 1703
Tsp45I GTSAC 1 cut(s) 149
TspGWI ACGGA 1 cut(s) 2115
TspRI CASTG 1 cut(s) 1586
XagI CCTNNNNNAGG 1 cut(s) 1619
XapI RAATTY 4 cut(s) 115, 680, 1376, 1797
XceI RCATGY 2 cut(s) 797, 2291
XcmI CCANNNNNNNNNTGG 2 cut(s) 188, 448
XhoI CTCGAG 1 cut(s) 641
XmnI GAANNNNTTC 3 cut(s) 1096, 1155, 1929
XspI CTAG 3 cut(s) 317, 1616, 1760
Zsp2I ATGCAT 1 cut(s) 771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.