RchiOBHm_Chr2g0104581

Carrier of the growing fatty acid chain in fatty acid biosynthesis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0002077
Physical Location & Seq
Forward (+)
15912990 .. 15918411
5422 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47885

Sequence Viewer

Length: 132 bp
ATGGTACGCAGCAGCAGCGTTTCTAGTTTGAAATCGGTTTCTTTTTCCATTACTGGGAATCGCTTCCCATCTCTAACTTCAAGACCTGGACCTTTTCAAGTTTCCTATTCGAGAACACCATCAATTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PP-binding

Protein Analysis

43

Amino Acids

4.65

Weight (kDa)

12.0

Isoelectric Point (pI)

57.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 6
AfiI CCNNNNNNNGG 1 cut(s) 54
AgsI TTSAA 3 cut(s) 31, 81, 98
AjnI CCWGG 1 cut(s) 85
ApeKI GCWGC 3 cut(s) 9, 12, 15
Asp700I GAANNNNTTC 1 cut(s) 62
AspS9I GGNCC 1 cut(s) 89
AvaII GGWCC 1 cut(s) 89
BbvI GCAGC 3 cut(s) 21, 24, 27
BccI CCATC 2 cut(s) 76, 127
BciT130I CCWGG 1 cut(s) 87
BfaI CTAG 1 cut(s) 24
BisI GCNGC 3 cut(s) 10, 13, 16
BlsI GCNGC 3 cut(s) 11, 14, 17
Bme1390I CCNGG 1 cut(s) 87
Bme18I GGWCC 1 cut(s) 89
BmgT120I GGNCC 1 cut(s) 89
BmrFI CCNGG 1 cut(s) 87
BmrI ACTGGG 1 cut(s) 63
BmuI ACTGGG 1 cut(s) 63
Bsc4I CCNNNNNNNGG 1 cut(s) 54
Bse1I ACTGG 1 cut(s) 58
BseBI CCWGG 1 cut(s) 87
BseLI CCNNNNNNNGG 1 cut(s) 54
BseNI ACTGG 1 cut(s) 58
BseXI GCAGC 3 cut(s) 21, 24, 27
BslI CCNNNNNNNGG 1 cut(s) 54
BsrI ACTGG 1 cut(s) 58
Bst2UI CCWGG 1 cut(s) 87
BstMWI GCNNNNNNNGC 1 cut(s) 15
BstNI CCWGG 1 cut(s) 87
BstSCI CCNGG 1 cut(s) 85
BstV1I GCAGC 3 cut(s) 21, 24, 27
Cfr13I GGNCC 1 cut(s) 89
Csp6I GTAC 1 cut(s) 5
CviQI GTAC 1 cut(s) 5
Eco47I GGWCC 1 cut(s) 89
EcoRII CCWGG 1 cut(s) 85
Fnu4HI GCNGC 3 cut(s) 10, 13, 16
Fsp4HI GCNGC 3 cut(s) 10, 13, 16
FspBI CTAG 1 cut(s) 24
GluI GCNGC 3 cut(s) 10, 13, 16
HinfI GANTC 1 cut(s) 58
Hpy188III TCNNGA 2 cut(s) 81, 111
HpyF10VI GCNNNNNNNGC 1 cut(s) 15
LpnPI CCDG 3 cut(s) 39, 72, 99
Lsp1109I GCAGC 3 cut(s) 21, 24, 27
MaeI CTAG 1 cut(s) 24
MluCI AATT 1 cut(s) 123
MroXI GAANNNNTTC 1 cut(s) 62
MspR9I CCNGG 1 cut(s) 87
MvaI CCWGG 1 cut(s) 87
MwoI GCNNNNNNNGC 1 cut(s) 15
PdmI GAANNNNTTC 1 cut(s) 62
PfeI GAWTC 1 cut(s) 58
PkrI GCNGC 3 cut(s) 11, 14, 17
Psp6I CCWGG 1 cut(s) 85
PspGI CCWGG 1 cut(s) 85
PspPI GGNCC 1 cut(s) 89
RsaI GTAC 1 cut(s) 6
RsaNI GTAC 1 cut(s) 5
SatI GCNGC 3 cut(s) 10, 13, 16
Sau96I GGNCC 1 cut(s) 89
ScrFI CCNGG 1 cut(s) 87
SetI ASST 2 cut(s) 88, 94
SgeI CNNG 7 cut(s) 36, 66, 93, 98, 99, 110, 123
SinI GGWCC 1 cut(s) 89
Sse9I AATT 1 cut(s) 123
SspMI CTAG 1 cut(s) 24
StyD4I CCNGG 1 cut(s) 85
TaqI TCGA 1 cut(s) 110
TasI AATT 1 cut(s) 123
TfiI GAWTC 1 cut(s) 58
TseI GCWGC 3 cut(s) 9, 12, 15
VpaK11BI GGWCC 1 cut(s) 89
XmnI GAANNNNTTC 1 cut(s) 62
XspI CTAG 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.