Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0002332

Physical Location & Seq

Genomic Coordinates Reverse (-)

12479791 .. 12483514

Gene Structure 3724 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGGTGATCAATTCGAAAGCTTGGCTTCCTTTCCTGTTGTTGGTTTCTTCTCTTTTCCTTGCTTTCTCTCCGTCTTTCACTCTTGCAGAGCAAGATACAGACCAGCAATGTCAAAGAGAATGTAAGGACTTCCAGAGCCTTCCAATCCAATCCACGTGTTTGTCCCGATGCAAGAATATGGGGCCCTGGTCGGGTCCTCCGGTTGCTGGCGAAATGGTGTGGTACAGCCAATCTCATGGTCAGGAATGCCGACAGGAGTGTGAGAAGCAGGGAGCTCGGGTTCCGCTGGAACATTGTCAAAGGCAGTGCATGCAGCAACGGAAATTCAAGCAGTGCCACGAACAATGCCAACAGACCATTCAATCGCCGGAGATATGCCAGAAGATTTGCCGCCAGCATATCGAGGGAGGACAAGGTGAGGAGTTACAAAGTTATGTTTCTAACCATCACGAGCTGCAGCAGTGTCAGCAGCGTTGCCAGTCACTGCGCGGCCGAAAGCAGCACCAGTGTTTACAAGAATGCCAAGATCAAATGAGGCAACATGGTCATCAGCAATGCCAGCAGCGCTGCCAATCACAGCGTGGCCAAAAGCAGCATCAGTGTCTGCAAGAGTGCCAAGATCAAATGAGGCAACAAGGGCAGCAAGGACAAGATCAAATGAGGCAACAAGGACAACAATATGGGCAACAGCAATGTCAGCAGCGTTGCCAGTCGCAGCGCGGCCAACAGCAGCACCTGTGTCTGCAAAAGTGTCAAGACCAAATGAGGCAACATGGACAACAAGGACAACAAGAACAAGAGCGCGAGCAGATGAAGAGAATATGCCAGCAACATTGTGAGATGCAGCAAGGGAGTGGTGGGGGGCAGCAATGCCAAAGACAGTGTGAGCAGCAATGCGCACAGCAAGGACAGCAGCAGCAGGGCGGCAGCACAGGAGGAGTTCGTCTGAACCGATATGGACAAGGAGAAGAGGAGCAGATGATGGGGGATCAGAGGAACAATCCCTTCTACTTTCCATCACAGATGTTTCAGTCGCGGTTCCAGTCCAATGAAGGCGGTCTTCAGGTACTTGAGAGGTTTGGAAAGAGTGAGCTTCTTCGTGGCATTAAGAACTACCGCTTGGCCATCTTTGAGGCAATGCCTAACACTTTTGTTCTCCCACACCATTGTGATGCTGAAGCGATTTTCGTTGTTCTCAATGGACAGTGTACCTGTACTCTTCTGTTGAAAGACAGAAGGGAGTCCTTCAACATGGAGCATGGAGATGTGATCAGAGTTCGTGCAGGGACTACTATTTACTTAACTAACAATAACAATGATGAACCTCTTCACATTGCAAAGCTCATCCGCTCTGTTAACAGTCCTGGACGATTTGAGGAATTCTTCCCTGCTGGTTCTGGAAATCCCGAGTCATACTTCAGCGTTTTTAGCAATGACATTCTTGAATCTGCCTTCAATACCCCAAGAAAAGAGCTGGAGCAGGGCTTTAGACAACAAAGGGGCCAACAAGGGGGCCAAGGCATGGTCATGAGAGCCCCAAAGGAGCAAATTGAGGCATTGAGTCAGCGTGCTTCTTCGGCCAGGCGTGAAGGACGCCGACAGTCTGAGGCTCCGTTCAATCTGAGACAACTAAAACCTGTGCACTCCAACAACTACGGCCAGCTCTTTGAGGCTCGCCCTGAAGAGTTCAATCAGTTCCAGGACATGGACGTCTCAGTCAGTTGCATTGAGATGAACCAACAAACTATGATGGTGCCACACTTCAATTCAAAAGCTACATTCCTCATATATGTTGTGGAAGGAAATGTACGTGTCGAAATGGGGTGCCCCCACTTGGCAAGCCAAATGAAAGGCCAAGAGACGATGGAGCAACAGGAGCAGGGAGAACAAAGTGGAAGGTTCATGAAGGTCAATGCTCAACTATCACCTGGTGATGCTTTTGTTATCCCAGCTGGTCATCCTGTTGCCTTTGTTACCCAGAGCGGCAACCAAAACCAAAACATCCGAATCCTGGGATTCGGACTCAATGCCCAATACAGCATGAGGAACTTCCTTGCAGGGCAAAAGGACAACATAATGCAGCAGATGGATAGGGAGGCTAAGCAGCTGGCATTTGGGCAAGACATGGAAAAAATATTTGGGAAGCAGCAGGAATCGTACTTTGTGCCAGCTCATAAGGGAAGAAGAGGGAAAAGCCATCCTTTGGCTTCTATTTTGGAGTTTGCTGGCATAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006950 GO:0006952 GO:0008150 GO:0009505 GO:0009605 GO:0009607 GO:0009615 GO:0009620 GO:0009719 GO:0009725 GO:0009735 GO:0010033 GO:0030312 GO:0031410 GO:0031982 GO:0033095 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0097708 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1 Vicilin_N

Protein Analysis

746

Amino Acids

85.51

Weight (kDa)

8.1

Isoelectric Point (pI)

64.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	539 - 709	6.4e-20	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002332)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22640
fragaria_vesca	FvH4_2g23190 FvH4_4g15931 FvH4_4g15931
malus_domestica	MD03G1261200.v1.1 MD11G1140200.v1.1 MD11G1281600.v1.1 MD13G1196800.v1.1 MD16G1197100.v1.1 MD16G1197200.v1.1
prunus_persica	Prupe.1G017700_v2.0.a1 Prupe.1G018000_v2.0.a1 Prupe.8G237500_v2.0.a1
pyrus_communis	pycom09g17330 pycom11g24970 pycom13g16920 pycom13g16930 pycom16g16590 pycom16g16620
rosa_chinensis	RchiOBHm_Chr4g0415511 RchiOBHm_Chr6g0290441
rosa_laevigata	RLG00000008067 RLG00000012215
rosa_multiflora	Rmu_sc0002890.1_g000006 Rmu_sc0007265.1_g000001 Rmu_sc0007625.1_g000002 Rmu_sc0020894.1_g000005 Rmu_sc0020894.1_g000006
rosa_roxburghii	Rroxscaffold_5G00359290 Rroxscaffold_7G00177060
rosa_rugosa	Rorug04G0134600 Rorug06G0212700
rosa_samantha	Rh4AG195500 Rh4BG194300 Rh4CG206400 Rh4DG193300 Rh6AG322900 Rh6BG330300 Rh6CG336400 Rh6DG323300
rosa_wichuraiana	Rw4G016650 Rw6G027990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1709, 1715
AatII	GACGTC	1 cut(s)	1713
Acc16I	TGCGCA	1 cut(s)	898
AccB1I	GGYRCC	2 cut(s)	1753, 1824
AccB7I	CCANNNNNTGG	3 cut(s)	1522, 1705, 2203
AccBSI	CCGCTC	2 cut(s)	1350, 1983
AccII	CGCG	4 cut(s)	489, 720, 804, 1036
AclWI	GGATC	1 cut(s)	996
AcoI	YGGCCR	6 cut(s)	490, 583, 721, 1122, 1578, 1657
AcsI	RAATTY	2 cut(s)	323, 1379
AcuI	CTGAAG	4 cut(s)	1046, 1197, 1402, 1701
AcvI	CACGTG	1 cut(s)	156
AcyI	GRCGYC	2 cut(s)	1594, 1710
AdeI	CACNNNGTG	2 cut(s)	581, 1931
AfaI	GTAC	6 cut(s)	224, 1068, 1210, 1216, 1809, 2159
AfeI	AGCGCT	1 cut(s)	566
AfiI	CCNNNNNNNGG	9 cut(s)	40, 191, 206, 1510, 1522, 1705, 1834, 2011, 2203
AflIII	ACRYGT	2 cut(s)	155, 1810
AjnI	CCWGG	6 cut(s)	185, 1363, 1580, 1698, 1927, 2010
AjuI	GAANNNNNNNTTGG	6 cut(s)	342, 374, 1103, 1135, 2121, 2153
AleI	CACNNNNGTG	1 cut(s)	1167
AloI	GAACNNNNNNTCC	2 cut(s)	264, 296
Alw21I	GWGCWC	2 cut(s)	277, 1644
Alw26I	GTCTC	3 cut(s)	1618, 1717, 1853
Alw44I	GTGCAC	1 cut(s)	1640
AlwI	GGATC	1 cut(s)	996
AlwNI	CAGNNNCTG	3 cut(s)	484, 604, 736
Ama87I	CYCGRG	2 cut(s)	276, 1406
Aor51HI	AGCGCT	1 cut(s)	566
ApaI	GGGCCC	1 cut(s)	186
ApaLI	GTGCAC	1 cut(s)	1640
ApoI	RAATTY	2 cut(s)	323, 1379
Asp700I	GAANNNNTTC	1 cut(s)	1326
AspLEI	GCGC	5 cut(s)	489, 567, 720, 804, 899
AspS9I	GGNCC	5 cut(s)	182, 183, 194, 1501, 1513
AsuHPI	GGTGA	4 cut(s)	16, 428, 1917, 1943
AsuII	TTCGAA	1 cut(s)	14
AvaI	CYCGRG	2 cut(s)	276, 1406
AvaII	GGWCC	1 cut(s)	194
BaeGI	GKGCMC	3 cut(s)	186, 1644, 1829
BalI	TGGCCA	2 cut(s)	585, 1124
BanI	GGYRCC	2 cut(s)	1753, 1824
BanII	GRGCYC	3 cut(s)	186, 277, 1537
BarI	GAAGNNNNNNTAC	2 cut(s)	1791, 1823
BauI	CACGAG	1 cut(s)	449
BbrPI	CACGTG	1 cut(s)	156
BbsI	GAAGAC	1 cut(s)	1052
Bbv12I	GWGCWC	2 cut(s)	277, 1644
BccI	CCATC	8 cut(s)	453, 976, 1024, 1133, 1744, 1858, 2080, 2205
BceAI	ACGGC	1 cut(s)	1672
BcgI	CGANNNNNNTGC	2 cut(s)	257, 291
BciT130I	CCWGG	6 cut(s)	187, 1365, 1582, 1700, 1929, 2012
BclI	TGATCA	2 cut(s)	6, 1269
BcoDI	GTCTC	3 cut(s)	1618, 1717, 1853
BfmI	CTRYAG	1 cut(s)	455
BfoI	RGCGCY	1 cut(s)	568
BlpI	GCTNAGC	1 cut(s)	2100
Bme1390I	CCNGG	6 cut(s)	187, 1365, 1582, 1700, 1929, 2012
Bme18I	GGWCC	1 cut(s)	194
BmeT110I	CYCGRG	2 cut(s)	276, 1406
BmgT120I	GGNCC	5 cut(s)	182, 183, 194, 1501, 1513
BmrFI	CCNGG	6 cut(s)	187, 1365, 1582, 1700, 1929, 2012
BmsI	GCATC	5 cut(s)	158, 604, 831, 1162, 1924
BpiI	GAAGAC	1 cut(s)	1052
BpmI	CTGGAG	1 cut(s)	1496
Bpu1102I	GCTNAGC	1 cut(s)	2100
Bpu14I	TTCGAA	1 cut(s)	14
BpuEI	CTTGAG	1 cut(s)	1091
BsaAI	YACGTR	2 cut(s)	156, 1811
BsaHI	GRCGYC	2 cut(s)	1594, 1710
BsaJI	CCNNGG	3 cut(s)	185, 1516, 2011
BsaWI	WCCGGW	1 cut(s)	199
BsaXI	ACNNNNNCTCC	2 cut(s)	264, 294
Bsc4I	CCNNNNNNNGG	9 cut(s)	40, 191, 206, 1510, 1522, 1705, 1834, 2011, 2203
Bse1I	ACTGG	4 cut(s)	478, 505, 709, 1042
Bse3DI	GCAATG	8 cut(s)	113, 560, 698, 875, 899, 1143, 1332, 1438
BseBI	CCWGG	6 cut(s)	187, 1365, 1582, 1700, 1929, 2012
BseDI	CCNNGG	3 cut(s)	185, 1516, 2011
BseGI	GGATG	4 cut(s)	1344, 1957, 2001, 2197
BseLI	CCNNNNNNNGG	9 cut(s)	40, 191, 206, 1510, 1522, 1705, 1834, 2011, 2203
BseMI	GCAATG	8 cut(s)	113, 560, 698, 875, 899, 1143, 1332, 1438
BseMII	CTCAG	3 cut(s)	1596, 1613, 1728
BseNI	ACTGG	4 cut(s)	478, 505, 709, 1042
BseRI	GAGGAG	3 cut(s)	434, 951, 986
BseSI	GKGCMC	3 cut(s)	186, 1644, 1829
BseX3I	CGGCCG	1 cut(s)	490
BseYI	CCCAGC	1 cut(s)	1948
BsgI	GTGCAG	1 cut(s)	1302
Bsh1236I	CGCG	4 cut(s)	489, 720, 804, 1036
Bsh1285I	CGRYCG	1 cut(s)	493
BshNI	GGYRCC	2 cut(s)	1753, 1824
BsiEI	CGRYCG	1 cut(s)	493
BsiHKAI	GWGCWC	2 cut(s)	277, 1644
BsiHKCI	CYCGRG	2 cut(s)	276, 1406
BsiSI	CCGG	2 cut(s)	200, 368
BslFI	GGGAC	2 cut(s)	148, 1300
BslI	CCNNNNNNNGG	9 cut(s)	40, 191, 206, 1510, 1522, 1705, 1834, 2011, 2203
BsmAI	GTCTC	3 cut(s)	1618, 1717, 1853
BsmBI	CGTCTC	2 cut(s)	1717, 1853
BsmFI	GGGAC	2 cut(s)	148, 1300
BsmI	GAATGC	2 cut(s)	251, 524
BsoBI	CYCGRG	2 cut(s)	276, 1406
Bsp119I	TTCGAA	1 cut(s)	14
Bsp120I	GGGCCC	1 cut(s)	182
Bsp1286I	GDGCHC	5 cut(s)	186, 277, 1537, 1644, 1829
Bsp143I	GATC	6 cut(s)	6, 526, 619, 652, 988, 1269
Bsp1720I	GCTNAGC	1 cut(s)	2100
BspCNI	CTCAG	3 cut(s)	1597, 1614, 1727
BspFNI	CGCG	4 cut(s)	489, 720, 804, 1036
BspHI	TCATGA	2 cut(s)	1527, 1902
BspMAI	CTGCAG	1 cut(s)	459
BspPI	GGATC	1 cut(s)	996
BspT104I	TTCGAA	1 cut(s)	14
BspT107I	GGYRCC	2 cut(s)	1753, 1824
BsrBI	CCGCTC	2 cut(s)	1350, 1983
BsrDI	GCAATG	8 cut(s)	113, 560, 698, 875, 899, 1143, 1332, 1438
BsrI	ACTGG	4 cut(s)	478, 505, 709, 1042
BssECI	CCNNGG	3 cut(s)	185, 1516, 2011
BssMI	GATC	6 cut(s)	6, 526, 619, 652, 988, 1269
BssNI	GRCGYC	2 cut(s)	1594, 1710
BssSI	CACGAG	1 cut(s)	449
BssT1I	CCWWGG	1 cut(s)	1516
Bst2BI	CACGAG	1 cut(s)	449
Bst2UI	CCWGG	6 cut(s)	187, 1365, 1582, 1700, 1929, 2012
Bst4CI	ACNGT	4 cut(s)	882, 1206, 1361, 1602
Bst6I	CTCTTC	6 cut(s)	809, 963, 1224, 1332, 1677, 2179
BstACI	GRCGYC	2 cut(s)	1594, 1710
BstAPI	GCANNNNNTGC	1 cut(s)	310
BstBAI	YACGTR	2 cut(s)	156, 1811
BstBI	TTCGAA	1 cut(s)	14
BstDEI	CTNAG	4 cut(s)	1605, 1622, 1714, 2100
BstF5I	GGATG	4 cut(s)	1344, 1957, 2001, 2197
BstFNI	CGCG	4 cut(s)	489, 720, 804, 1036
BstH2I	RGCGCY	1 cut(s)	568
BstHHI	GCGC	5 cut(s)	489, 567, 720, 804, 899
BstKTI	GATC	6 cut(s)	9, 529, 622, 655, 991, 1272
BstMAI	GTCTC	3 cut(s)	1618, 1717, 1853
BstMBI	GATC	6 cut(s)	6, 526, 619, 652, 988, 1269
BstMCI	CGRYCG	1 cut(s)	493
BstNI	CCWGG	6 cut(s)	187, 1365, 1582, 1700, 1929, 2012
BstNSI	RCATGY	1 cut(s)	313
BstSCI	CCNGG	6 cut(s)	185, 1363, 1580, 1698, 1927, 2010
BstSFI	CTRYAG	1 cut(s)	455
BstSLI	GKGCMC	3 cut(s)	186, 1644, 1829
BstUI	CGCG	4 cut(s)	489, 720, 804, 1036
BstV2I	GAAGAC	1 cut(s)	1052
BstXI	CCANNNNNNTGG	1 cut(s)	236
BstZI	CGGCCG	1 cut(s)	490
BtsCI	GGATG	4 cut(s)	1344, 1957, 2001, 2197
BtsI	GCAGTG	4 cut(s)	311, 338, 467, 482
BtsIMutI	CAGTG	8 cut(s)	311, 338, 467, 482, 512, 605, 887, 1211
CaiI	CAGNNNCTG	3 cut(s)	484, 604, 736
CciI	TCATGA	2 cut(s)	1527, 1902
CfoI	GCGC	5 cut(s)	489, 567, 720, 804, 899
Cfr13I	GGNCC	5 cut(s)	182, 183, 194, 1501, 1513
CseI	GACGC	1 cut(s)	1602
CsiI	ACCWGGT	1 cut(s)	1927
Csp6I	GTAC	6 cut(s)	223, 1067, 1209, 1215, 1808, 2158
CviQI	GTAC	6 cut(s)	223, 1067, 1209, 1215, 1808, 2158
DdeI	CTNAG	4 cut(s)	1605, 1622, 1714, 2100
DpnI	GATC	6 cut(s)	8, 528, 621, 654, 990, 1271
DpnII	GATC	6 cut(s)	6, 526, 619, 652, 988, 1269
DraIII	CACNNNGTG	2 cut(s)	581, 1931
DrdI	GACNNNNNNGTC	2 cut(s)	1709, 1715
DseDI	GACNNNNNNGTC	2 cut(s)	1709, 1715
EaeI	YGGCCR	6 cut(s)	490, 583, 721, 1122, 1578, 1657
EagI	CGGCCG	1 cut(s)	490
Eam1104I	CTCTTC	6 cut(s)	809, 963, 1224, 1332, 1677, 2179
EarI	CTCTTC	6 cut(s)	809, 963, 1224, 1332, 1677, 2179
Ecl136II	GAGCTC	1 cut(s)	275
EclXI	CGGCCG	1 cut(s)	490
Eco130I	CCWWGG	1 cut(s)	1516
Eco24I	GRGCYC	3 cut(s)	186, 277, 1537
Eco47I	GGWCC	1 cut(s)	194
Eco47III	AGCGCT	1 cut(s)	566
Eco52I	CGGCCG	1 cut(s)	490
Eco53kI	GAGCTC	1 cut(s)	275
Eco57I	CTGAAG	4 cut(s)	1046, 1197, 1402, 1701
Eco72I	CACGTG	1 cut(s)	156
Eco88I	CYCGRG	2 cut(s)	276, 1406
EcoICRI	GAGCTC	1 cut(s)	275
EcoO109I	RGGNCCY	3 cut(s)	182, 183, 194
EcoRI	GAATTC	1 cut(s)	1379
EcoRII	CCWGG	6 cut(s)	185, 1363, 1580, 1698, 1927, 2010
EcoT14I	CCWWGG	1 cut(s)	1516
EcoT38I	GRGCYC	3 cut(s)	186, 277, 1537
ErhI	CCWWGG	1 cut(s)	1516
Esp3I	CGTCTC	2 cut(s)	1717, 1853
FalI	AAGNNNNNCTT	6 cut(s)	9, 41, 1044, 1076, 2185, 2217
FaqI	GGGAC	2 cut(s)	148, 1300
FbaI	TGATCA	2 cut(s)	6, 1269
FokI	GGATG	4 cut(s)	1331, 1944, 1988, 2184
FriOI	GRGCYC	3 cut(s)	186, 277, 1537
FspAI	RTGCGCAY	1 cut(s)	898
FspI	TGCGCA	1 cut(s)	898
GlaI	GCGC	5 cut(s)	488, 566, 719, 803, 898
GsaI	CCCAGC	1 cut(s)	1952
GsuI	CTGGAG	1 cut(s)	1496
HaeII	RGCGCY	1 cut(s)	568
HapII	CCGG	2 cut(s)	200, 368
HgaI	GACGC	1 cut(s)	1602
HhaI	GCGC	5 cut(s)	489, 567, 720, 804, 899
Hin1I	GRCGYC	2 cut(s)	1594, 1710
Hin6I	GCGC	5 cut(s)	487, 565, 718, 802, 897
HinP1I	GCGC	5 cut(s)	487, 565, 718, 802, 897
HincII	GTYRAC	1 cut(s)	1357
HindII	GTYRAC	1 cut(s)	1357
HindIII	AAGCTT	1 cut(s)	18
HinfI	GANTC	8 cut(s)	1241, 1409, 1445, 1561, 2007, 2016, 2022, 2153
HpaI	GTTAAC	1 cut(s)	1357
HpaII	CCGG	2 cut(s)	200, 368
HphI	GGTGA	4 cut(s)	16, 428, 1917, 1943
Hpy166II	GTNNAC	4 cut(s)	512, 1209, 1357, 1642
Hpy188I	TCNGA	7 cut(s)	948, 993, 1274, 1606, 1623, 2006, 2021
Hpy8I	GTNNAC	4 cut(s)	512, 1209, 1357, 1642
HpyCH4III	ACNGT	4 cut(s)	882, 1206, 1361, 1602
HpyCH4IV	ACGT	3 cut(s)	155, 1710, 1810
HpyF3I	CTNAG	4 cut(s)	1605, 1622, 1714, 2100
HpySE526I	ACGT	3 cut(s)	155, 1710, 1810
Hsp92I	GRCGYC	2 cut(s)	1594, 1710
HspAI	GCGC	5 cut(s)	487, 565, 718, 802, 897
Ksp22I	TGATCA	2 cut(s)	6, 1269
KspAI	GTTAAC	1 cut(s)	1357
Kzo9I	GATC	6 cut(s)	6, 526, 619, 652, 988, 1269
LmnI	GCTCC	8 cut(s)	272, 973, 1255, 1477, 1543, 1615, 1867, 1876
LweI	GCATC	5 cut(s)	158, 604, 831, 1162, 1924
MabI	ACCWGGT	1 cut(s)	1927
MaeII	ACGT	3 cut(s)	155, 1710, 1810
MaeIII	GTNAC	3 cut(s)	423, 480, 1972
MalI	GATC	6 cut(s)	8, 528, 621, 654, 990, 1271
MbiI	CCGCTC	2 cut(s)	1350, 1983
MboI	GATC	6 cut(s)	6, 526, 619, 652, 988, 1269
MhlI	GDGCHC	5 cut(s)	186, 277, 1537, 1644, 1829
MlsI	TGGCCA	2 cut(s)	585, 1124
MluCI	AATT	5 cut(s)	10, 323, 1379, 1548, 1765
MluNI	TGGCCA	2 cut(s)	585, 1124
MlyI	GAGTC	4 cut(s)	1250, 1418, 1570, 2016
MmeI	TCCRAC	1 cut(s)	1671
Mox20I	TGGCCA	2 cut(s)	585, 1124
MroXI	GAANNNNTTC	1 cut(s)	1326
MscI	TGGCCA	2 cut(s)	585, 1124
MseI	TTAA	3 cut(s)	1107, 1301, 1356
MslI	CAYNNNNRTG	5 cut(s)	1167, 1170, 1263, 1526, 1730
Msp20I	TGGCCA	2 cut(s)	585, 1124
MspA1I	CMGCKG	3 cut(s)	286, 1952, 2107
MspI	CCGG	2 cut(s)	200, 368
MspR9I	CCNGG	6 cut(s)	187, 1365, 1582, 1700, 1929, 2012
Mva1269I	GAATGC	2 cut(s)	251, 524
MvaI	CCWGG	6 cut(s)	187, 1365, 1582, 1700, 1929, 2012
MvnI	CGCG	4 cut(s)	489, 720, 804, 1036
NdeII	GATC	6 cut(s)	6, 526, 619, 652, 988, 1269
NmuCI	GTSAC	1 cut(s)	480
NsbI	TGCGCA	1 cut(s)	898
NspI	RCATGY	1 cut(s)	313
NspV	TTCGAA	1 cut(s)	14
OliI	CACNNNNGTG	1 cut(s)	1167
PaeI	GCATGC	1 cut(s)	313
PagI	TCATGA	2 cut(s)	1527, 1902
PcsI	WCGNNNNNNNCGW	1 cut(s)	949
PctI	GAATGC	2 cut(s)	251, 524
PdmI	GAANNNNTTC	1 cut(s)	1326
PfeI	GAWTC	4 cut(s)	1445, 2007, 2016, 2153
PflMI	CCANNNNNTGG	3 cut(s)	1522, 1705, 2203
PfoI	TCCNGGA	2 cut(s)	1363, 1698
PleI	GAGTC	4 cut(s)	1249, 1417, 1569, 2016
PmaCI	CACGTG	1 cut(s)	156
PmlI	CACGTG	1 cut(s)	156
PpsI	GAGTC	4 cut(s)	1249, 1417, 1569, 2016
Ppu21I	YACGTR	2 cut(s)	156, 1811
PpuMI	RGGWCCY	1 cut(s)	194
Psp124BI	GAGCTC	1 cut(s)	277
Psp5II	RGGWCCY	1 cut(s)	194
Psp6I	CCWGG	6 cut(s)	185, 1363, 1580, 1698, 1927, 2010
PspCI	CACGTG	1 cut(s)	156
PspFI	CCCAGC	1 cut(s)	1948
PspGI	CCWGG	6 cut(s)	185, 1363, 1580, 1698, 1927, 2010
PspOMI	GGGCCC	1 cut(s)	182
PspPI	GGNCC	5 cut(s)	182, 183, 194, 1501, 1513
PspPPI	RGGWCCY	1 cut(s)	194
PstI	CTGCAG	1 cut(s)	459
PstNI	CAGNNNCTG	3 cut(s)	484, 604, 736
PvuII	CAGCTG	2 cut(s)	1952, 2107
RsaI	GTAC	6 cut(s)	224, 1068, 1210, 1216, 1809, 2159
RsaNI	GTAC	6 cut(s)	223, 1067, 1209, 1215, 1808, 2158
RseI	CAYNNNNRTG	5 cut(s)	1167, 1170, 1263, 1526, 1730
SacI	GAGCTC	1 cut(s)	277
SaqAI	TTAA	3 cut(s)	1107, 1301, 1356
Sau3AI	GATC	6 cut(s)	6, 526, 619, 652, 988, 1269
Sau96I	GGNCC	5 cut(s)	182, 183, 194, 1501, 1513
SchI	GAGTC	4 cut(s)	1250, 1418, 1570, 2016
ScrFI	CCNGG	6 cut(s)	187, 1365, 1582, 1700, 1929, 2012
SduI	GDGCHC	5 cut(s)	186, 277, 1537, 1644, 1829
SexAI	ACCWGGT	1 cut(s)	1927
SfaNI	GCATC	5 cut(s)	158, 604, 831, 1162, 1924
SfcI	CTRYAG	1 cut(s)	455
SfuI	TTCGAA	1 cut(s)	14
SinI	GGWCC	1 cut(s)	194
SmiMI	CAYNNNNRTG	5 cut(s)	1167, 1170, 1263, 1526, 1730
SmlI	CTYRAG	1 cut(s)	1070
SmoI	CTYRAG	1 cut(s)	1070
SphI	GCATGC	1 cut(s)	313
Sse9I	AATT	5 cut(s)	10, 323, 1379, 1548, 1765
SspI	AATATT	1 cut(s)	2136
SstI	GAGCTC	1 cut(s)	277
StyD4I	CCNGG	6 cut(s)	185, 1363, 1580, 1698, 1927, 2010
StyI	CCWWGG	1 cut(s)	1516
TaaI	ACNGT	4 cut(s)	882, 1206, 1361, 1602
TaiI	ACGT	3 cut(s)	158, 1713, 1813
TaqI	TCGA	3 cut(s)	14, 402, 1815
TasI	AATT	5 cut(s)	10, 323, 1379, 1548, 1765
TatI	WGTACW	1 cut(s)	1214
TauI	GCSGC	5 cut(s)	393, 492, 723, 927, 1986
TfiI	GAWTC	4 cut(s)	1445, 2007, 2016, 2153
Tru1I	TTAA	3 cut(s)	1107, 1301, 1356
Tru9I	TTAA	3 cut(s)	1107, 1301, 1356
TscAI	CASTG	8 cut(s)	311, 338, 467, 489, 512, 605, 887, 1211
TseFI	GTSAC	1 cut(s)	480
Tsp45I	GTSAC	1 cut(s)	480
TspDTI	ATGAA	7 cut(s)	827, 1065, 1335, 1748, 1862, 1891, 1919
TspGWI	ACGGA	3 cut(s)	60, 334, 1602
TspRI	CASTG	8 cut(s)	311, 338, 467, 489, 512, 605, 887, 1211
Van91I	CCANNNNNTGG	3 cut(s)	1522, 1705, 2203
VneI	GTGCAC	1 cut(s)	1640
VpaK11BI	GGWCC	1 cut(s)	194
XapI	RAATTY	2 cut(s)	323, 1379
XceI	RCATGY	1 cut(s)	313
XcmI	CCANNNNNNNNNTGG	1 cut(s)	578
XmnI	GAANNNNTTC	1 cut(s)	1326
ZraI	GACGTC	1 cut(s)	1711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.