Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0002485

Physical Location & Seq

Genomic Coordinates Reverse (-)

24878035 .. 24880501

Gene Structure 2467 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGCTAAAGAATATGATGGAAGAGAAGCAGTTAGATCTTAATCAGCCACTTCTGTCTGTGAGACGATTTTCACCTACAGCAGTCACCTTAGAAGCTGATGACAAAAGGAAGACTGATAAGTCAATACCCAAACTTCCTCCTCTTCCCTTTTACAAATCAGAACTGAAATCAGGTCCAGTGGGGCACCCAGGTACTGTTCCTTTTGTATGGGAGAAAGTCCCGGGAAGACCCAAGGATGAAAGAAATTCACAAACTCGGGGTCTTGAACTGCCTCCCAGTACGCCAAGGCTTCCGCCTGGAAGGGTTTTGAATGCTAAGAAGCAAGCATTGGATAAATGTTCTAAACGCACTACAACTGCTCAGTCCCCAACTGGAAATGTACATTCTGATTTTAACAATGTTTCAACCTTTGATACAAAAGAAGTTACCAAGTGTGACAGCCTTAAAGAGGGGATGGATGATAAGGATATTGCTGATTCAGAGGATGGTTATGAGACCTATTTAGATGCACCTGACACACTTTCGAGGAGTGAATCATTCTATTATAACTGTAGTATAAGTGGTTTGAGTGGACTGGACGGTCCAGATGCCAAACCATGTGGAACCTTCTCAACAGATCCACAGACTCGTGACTTCATGATGGGTCGGTTCTTGCCTGCAGCAAAAGCAATGGTTTCAGACACACCTCAATATGCTACCAGGAAGCAACCAGTTGCACGAGAGCAAGCAATTTCTCAAGAGCAACCAAGAGGGATGAAGAAGGTAGCGAGCGGGGTTAAGCAACATCCACTTAATCAATACAGGGCAAATGATTTGCCACATAATGTTCAAGATATAGCTGGGGACAAAAGTGAGAATGAAGGTATGAGAGGGCAACCACAATCACCCATTTCTTCAGTTAGTAGACTGCGAGCTAAATCTTCCTATGCCAGTGCTTACAGAGAAGCTAAAAACGAGCATTCTGGGGGTGATGGACATCAGGAAGCTGGGATGCCTGAAGATAGGAATGATTTGAAATGTGAATCCAACCAGATCAAAATAAGCGAATGTCAGAAATTAGATGGGTCACCTGTATATAGGCGTCAGCAGGGTAGTAACATATCACCCTATCGAAAGGAATGCTTTCATCATGAAGAAAAAGGTTTTCTTGGTCTTCCTGAAAAAGCGAAGAATTCCAGAGATACTATTAGCTCTGGAAAGTATCGAAAGGGCCACAACAATTTTAGGGAATTATTGGCTACTGAGAATGTTACTCAATGGGAAATGGGCCCAGGGAGTCCTGCATTTGAGAAGAATCTGTATATTGATTTTGTGCATACTGTAAAATCTCCGAAATCGAAGTCACATTCCTCAGATACAAAGGGCCATATTATTCAGTACAGAGGGAATGATATTGAAATTCCTGAGAAAAGTAATGAAGTGAAAGAAACCCCTTCGGCAGAGTTTTCATTCCAAGATATTGAGTGCTTGGGTGATGGAAATGAAAAGGCAATAGTGCCATTTCAAAGTTTGGAGTTTCCTGACTCCAGCTTTCTATCTTGGTCTGGCAGATCCAAGAAGGATGATCAAACAGACATGAGAAATGGTTTTTTATCGGGTCAGGATTCTAGCAAATTTGCAAGCTCAAAATTGGCTGAACAAGAAAGGTGTAACTTGAAAAGCCAACATTTAGAGAAATCAGTTCATTGGGAAAATTTTAATGGGCTTACTCAGGATTGTATTACATCGACAAGGGCGAAACTGAATGATGAGAAAAAGAGTGATTTAAAAAGCCAACAGTCTAGAAAAGCAGGAACAGAAGAAAGTTCCCGTAGCCATGTTCAGAAGTCTATTACATTGACCAGCTCAAAAGTGGCCAATGGAGGAAAGATTGATTTAGAAAGTCAACAACTTGTGAAATTTGGTAATCAAGAAAGTTCCAAGGGCCACAATTCACGACTGCCTCTTGGACCACCTTTACCGAAATCTCCATCAGAGTCTTGGCTAAAGCATACCTTACCTAGTATTTCCTCGAGGAGCTCATCTTCACAGTGTTCTTCTGGTTCACAGATTTATGCTAGCAGCCAGCCTTCGAAGACGTCCTCTCTTGGTCCCAAATGGGAGACAATTGTTAAAACTTCTAACAAGCACCATGGACATCTGCGGTTTTCAGAGGAGCTTCTGACACCTATACCGGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF688

Protein Analysis

728

Amino Acids

80.72

Weight (kDa)

8.66

Isoelectric Point (pI)

53.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF688	PF05097	6 - 286	8.5e-73	Protein of unknown function (DUF688)
DUF688	PF05097	297 - 454	7.5e-10	Protein of unknown function (DUF688)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30990 AT2G30990 AT2G30990 AT2G30990 AT2G30990
fragaria_vesca	FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510 FvH4_6g27510
malus_domestica	MD09G1236600.v1.1 MD17G1266300.v1.1 MD17G1266400.v1.1
prunus_persica	Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1 Prupe.3G117500_v2.0.a1
pyrus_communis	pycom09g15510 pycom09g15520 pycom17g26590
rosa_chinensis	RchiOBHm_Chr2g0129801 RchiOBHm_Chr2g0129871 RchiOBHm_Chr7g0242591 RchiOBHm_Chr7g0242601
rosa_laevigata	RLG00000019104 RLG00000031611
rosa_multiflora	Rmu_sc0000650.1_g000026 Rmu_sc0007216.1_g000002
rosa_roxburghii	Rroxscaffold_2G00114300
rosa_rugosa	Rorug02G0289800 Rorug02G0289900 Rorug02G0290000 Rorug02G0290100 Rorug02G0290200
rosa_samantha	Rh2AG340700 Rh2AG341300 Rh2BG349100 Rh2CG328000 Rh2DG367400 Rh3CG154600 Rh3DG155700
rosa_wichuraiana	Rw2G027770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	546
AasI	GACNNNNNNGTC	2 cut(s)	118, 579
AatII	GACGTC	1 cut(s)	2081
AbsI	CCTCGAGG	1 cut(s)	2011
AccB1I	GGYRCC	1 cut(s)	183
AccBSI	CCGCTC	1 cut(s)	771
AccI	GTMKAC	1 cut(s)	904
AciI	CCGC	3 cut(s)	293, 771, 2143
AclWI	GGATC	2 cut(s)	611, 1545
AcoI	YGGCCR	1 cut(s)	1854
AcsI	RAATTY	6 cut(s)	244, 1171, 1398, 1613, 1693, 1898
AcuI	CTGAAG	2 cut(s)	879, 1017
AcyI	GRCGYC	2 cut(s)	1081, 2078
AfaI	GTAC	4 cut(s)	193, 280, 381, 1379
AfiI	CCNNNNNNNGG	1 cut(s)	448
AgsI	TTSAA	8 cut(s)	266, 310, 405, 830, 1015, 1397, 1505, 1657
AjnI	CCWGG	4 cut(s)	187, 295, 698, 1270
AjuI	GAANNNNNNNTTGG	2 cut(s)	311, 343
Alw21I	GWGCWC	1 cut(s)	2021
Alw26I	GTCTC	3 cut(s)	55, 488, 2096
AlwI	GGATC	2 cut(s)	611, 1545
AlwNI	CAGNNNCTG	1 cut(s)	194
Ama87I	CYCGRG	3 cut(s)	220, 255, 2011
AoxI	GGCC	5 cut(s)	1210, 1267, 1363, 1854, 1924
ApaI	GGGCCC	1 cut(s)	1271
ApeKI	GCWGC	2 cut(s)	659, 2061
ApoI	RAATTY	6 cut(s)	244, 1171, 1398, 1613, 1693, 1898
ArsI	GACNNNNNNTTYG	4 cut(s)	244, 276, 1325, 1357
Asp700I	GAANNNNTTC	1 cut(s)	1122
AspS9I	GGNCC	9 cut(s)	173, 581, 1210, 1267, 1268, 1363, 1924, 1949, 2090
AsuC2I	CCSGG	2 cut(s)	221, 222
AsuHPI	GGTGA	7 cut(s)	63, 76, 876, 980, 1059, 1095, 1484
AsuII	TTCGAA	1 cut(s)	2072
AsuNHI	GCTAGC	1 cut(s)	2057
AvaI	CYCGRG	3 cut(s)	220, 255, 2011
AvaII	GGWCC	4 cut(s)	173, 581, 1949, 2090
BaeGI	GKGCMC	2 cut(s)	186, 1271
BalI	TGGCCA	1 cut(s)	1856
BanI	GGYRCC	1 cut(s)	183
BanII	GRGCYC	2 cut(s)	1271, 2021
BauI	CACGAG	2 cut(s)	627, 717
BbsI	GAAGAC	4 cut(s)	116, 232, 1145, 2081
Bbv12I	GWGCWC	1 cut(s)	2021
BbvI	GCAGC	2 cut(s)	671, 2073
BccI	CCATC	8 cut(s)	10, 448, 479, 634, 965, 1055, 1469, 1978
BcgI	CGANNNNNNTGC	2 cut(s)	1101, 1135
BciT130I	CCWGG	4 cut(s)	189, 297, 700, 1272
BclI	TGATCA	1 cut(s)	1564
BcnI	CCSGG	2 cut(s)	221, 222
BcoDI	GTCTC	3 cut(s)	55, 488, 2096
BfaI	CTAG	4 cut(s)	1608, 1782, 2001, 2058
BfmI	CTRYAG	3 cut(s)	75, 550, 657
BglII	AGATCT	1 cut(s)	34
BisI	GCNGC	2 cut(s)	660, 2062
BlsI	GCNGC	2 cut(s)	661, 2063
Bme1390I	CCNGG	6 cut(s)	189, 221, 222, 297, 700, 1272
Bme18I	GGWCC	4 cut(s)	173, 581, 1949, 2090
BmeT110I	CYCGRG	3 cut(s)	220, 255, 2011
BmgT120I	GGNCC	9 cut(s)	173, 581, 1210, 1267, 1268, 1363, 1924, 1949, 2090
BmiI	GGNNCC	4 cut(s)	185, 604, 1269, 2092
BmrFI	CCNGG	6 cut(s)	189, 221, 222, 297, 700, 1272
BmrI	ACTGGG	1 cut(s)	270
BmsI	GCATC	3 cut(s)	496, 577, 981
BmtI	GCTAGC	1 cut(s)	2061
BmuI	ACTGGG	1 cut(s)	270
BpiI	GAAGAC	4 cut(s)	116, 232, 1145, 2081
BpmI	CTGGAG	1 cut(s)	1510
Bpu14I	TTCGAA	1 cut(s)	2072
BpuEI	CTTGAG	1 cut(s)	720
BpuMI	CCSGG	2 cut(s)	221, 222
BsaBI	GATNNNNATC	2 cut(s)	39, 975
BsaHI	GRCGYC	2 cut(s)	1081, 2078
BsaI	GGTCTC	1 cut(s)	488
BsaJI	CCNNGG	8 cut(s)	187, 220, 231, 284, 1270, 1271, 1920, 2131
BsaWI	WCCGGW	1 cut(s)	2173
Bsc4I	CCNNNNNNNGG	1 cut(s)	448
Bse1I	ACTGG	6 cut(s)	176, 276, 376, 579, 710, 930
Bse3DI	GCAATG	1 cut(s)	675
Bse8I	GATNNNNATC	2 cut(s)	39, 975
BseBI	CCWGG	4 cut(s)	189, 297, 700, 1272
BseDI	CCNNGG	8 cut(s)	187, 220, 231, 284, 1270, 1271, 1920, 2131
BseGI	GGATG	8 cut(s)	241, 459, 463, 490, 759, 784, 996, 1567
BseJI	GATNNNNATC	2 cut(s)	39, 975
BseLI	CCNNNNNNNGG	1 cut(s)	448
BseMI	GCAATG	1 cut(s)	675
BseMII	CTCAG	5 cut(s)	374, 1233, 1365, 1395, 1724
BseNI	ACTGG	6 cut(s)	176, 276, 376, 579, 710, 930
BseRI	GAGGAG	4 cut(s)	129, 541, 2029, 2168
BseSI	GKGCMC	2 cut(s)	186, 1271
BseXI	GCAGC	2 cut(s)	671, 2073
BseYI	CCCAGC	2 cut(s)	839, 986
BshFI	GGCC	5 cut(s)	1212, 1269, 1365, 1856, 1926
BshNI	GGYRCC	1 cut(s)	183
BsiHKAI	GWGCWC	1 cut(s)	2021
BsiHKCI	CYCGRG	3 cut(s)	220, 255, 2011
BsiSI	CCGG	2 cut(s)	221, 2174
BslFI	GGGAC	4 cut(s)	203, 349, 857, 2076
BslI	CCNNNNNNNGG	1 cut(s)	448
BsmAI	GTCTC	3 cut(s)	55, 488, 2096
BsmBI	CGTCTC	1 cut(s)	55
BsmFI	GGGAC	4 cut(s)	203, 349, 857, 2076
BsmI	GAATGC	3 cut(s)	316, 958, 1124
BsnI	GGCC	5 cut(s)	1212, 1269, 1365, 1856, 1926
Bso31I	GGTCTC	1 cut(s)	488
BsoBI	CYCGRG	3 cut(s)	220, 255, 2011
Bsp119I	TTCGAA	1 cut(s)	2072
Bsp120I	GGGCCC	1 cut(s)	1267
Bsp1286I	GDGCHC	3 cut(s)	186, 1271, 2021
Bsp1407I	TGTACA	1 cut(s)	379
Bsp143I	GATC	5 cut(s)	34, 616, 1032, 1550, 1564
Bsp19I	CCATGG	1 cut(s)	2131
BspACI	CCGC	3 cut(s)	293, 771, 2143
BspANI	GGCC	5 cut(s)	1212, 1269, 1365, 1856, 1926
BspCNI	CTCAG	5 cut(s)	373, 1234, 1364, 1396, 1723
BspHI	TCATGA	2 cut(s)	636, 1129
BspLI	GGNNCC	4 cut(s)	185, 604, 1269, 2092
BspMAI	CTGCAG	1 cut(s)	661
BspOI	GCTAGC	1 cut(s)	2061
BspPI	GGATC	2 cut(s)	611, 1545
BspT104I	TTCGAA	1 cut(s)	2072
BspT107I	GGYRCC	1 cut(s)	183
BspTNI	GGTCTC	1 cut(s)	488
BsrBI	CCGCTC	1 cut(s)	771
BsrDI	GCAATG	1 cut(s)	675
BsrGI	TGTACA	1 cut(s)	379
BsrI	ACTGG	6 cut(s)	176, 276, 376, 579, 710, 930
BssECI	CCNNGG	8 cut(s)	187, 220, 231, 284, 1270, 1271, 1920, 2131
BssMI	GATC	5 cut(s)	34, 616, 1032, 1550, 1564
BssNI	GRCGYC	2 cut(s)	1081, 2078
BssSI	CACGAG	2 cut(s)	627, 717
BssT1I	CCWWGG	4 cut(s)	231, 284, 1920, 2131
Bst2BI	CACGAG	2 cut(s)	627, 717
Bst2UI	CCWGG	4 cut(s)	189, 297, 700, 1272
Bst4CI	ACNGT	6 cut(s)	196, 551, 581, 1321, 1779, 2031
Bst6I	CTCTTC	2 cut(s)	15, 147
BstACI	GRCGYC	2 cut(s)	1081, 2078
BstAUI	TGTACA	1 cut(s)	379
BstBI	TTCGAA	1 cut(s)	2072
BstC8I	GCNNGC	8 cut(s)	324, 657, 726, 769, 912, 1621, 2059, 2066
BstDEI	CTNAG	8 cut(s)	88, 315, 360, 1242, 1351, 1404, 1710, 2181
BstDSI	CCRYGG	1 cut(s)	2131
BstEII	GGTNACC	1 cut(s)	1065
BstENI	CCTNNNNNAGG	1 cut(s)	446
BstF5I	GGATG	8 cut(s)	241, 459, 463, 490, 759, 784, 996, 1567
BstKTI	GATC	5 cut(s)	37, 619, 1035, 1553, 1567
BstMAI	GTCTC	3 cut(s)	55, 488, 2096
BstMBI	GATC	5 cut(s)	34, 616, 1032, 1550, 1564
BstMWI	GCNNNNNNNGC	1 cut(s)	665
BstNI	CCWGG	4 cut(s)	189, 297, 700, 1272
BstPI	GGTNACC	1 cut(s)	1065
BstSCI	CCNGG	6 cut(s)	187, 219, 220, 295, 698, 1270
BstSFI	CTRYAG	3 cut(s)	75, 550, 657
BstSLI	GKGCMC	2 cut(s)	186, 1271
BstV1I	GCAGC	2 cut(s)	671, 2073
BstV2I	GAAGAC	4 cut(s)	116, 232, 1145, 2081
BstX2I	RGATCY	3 cut(s)	34, 616, 1550
BstYI	RGATCY	3 cut(s)	34, 616, 1550
BsuRI	GGCC	5 cut(s)	1212, 1269, 1365, 1856, 1926
BtgI	CCRYGG	1 cut(s)	2131
BtsCI	GGATG	8 cut(s)	241, 459, 463, 490, 759, 784, 996, 1567
BtsIMutI	CAGTG	3 cut(s)	183, 937, 2036
Cac8I	GCNNGC	8 cut(s)	324, 657, 726, 769, 912, 1621, 2059, 2066
CaiI	CAGNNNCTG	1 cut(s)	194
CciI	TCATGA	2 cut(s)	636, 1129
Cfr13I	GGNCC	9 cut(s)	173, 581, 1210, 1267, 1268, 1363, 1924, 1949, 2090
Cfr9I	CCCGGG	1 cut(s)	220
CseI	GACGC	1 cut(s)	1070
Csp6I	GTAC	4 cut(s)	192, 279, 380, 1378
CspCI	CAANNNNNGTGG	2 cut(s)	580, 615
CviAII	CATG	6 cut(s)	597, 637, 1130, 1576, 1817, 2132
CviQI	GTAC	4 cut(s)	192, 279, 380, 1378
DdeI	CTNAG	8 cut(s)	88, 315, 360, 1242, 1351, 1404, 1710, 2181
DpnI	GATC	5 cut(s)	36, 618, 1034, 1552, 1566
DpnII	GATC	5 cut(s)	34, 616, 1032, 1550, 1564
DraI	TTTAAA	1 cut(s)	1767
DrdI	GACNNNNNNGTC	2 cut(s)	118, 579
DseDI	GACNNNNNNGTC	2 cut(s)	118, 579
EaeI	YGGCCR	1 cut(s)	1854
Eam1104I	CTCTTC	2 cut(s)	15, 147
EarI	CTCTTC	2 cut(s)	15, 147
EciI	GGCGGA	1 cut(s)	282
Ecl136II	GAGCTC	1 cut(s)	2019
Eco130I	CCWWGG	4 cut(s)	231, 284, 1920, 2131
Eco24I	GRGCYC	2 cut(s)	1271, 2021
Eco31I	GGTCTC	1 cut(s)	488
Eco47I	GGWCC	4 cut(s)	173, 581, 1949, 2090
Eco53kI	GAGCTC	1 cut(s)	2019
Eco57I	CTGAAG	2 cut(s)	879, 1017
Eco88I	CYCGRG	3 cut(s)	220, 255, 2011
Eco91I	GGTNACC	1 cut(s)	1065
EcoICRI	GAGCTC	1 cut(s)	2019
EcoNI	CCTNNNNNAGG	1 cut(s)	446
EcoO65I	GGTNACC	1 cut(s)	1065
EcoRI	GAATTC	1 cut(s)	1171
EcoRII	CCWGG	4 cut(s)	187, 295, 698, 1270
EcoT14I	CCWWGG	4 cut(s)	231, 284, 1920, 2131
EcoT38I	GRGCYC	2 cut(s)	1271, 2021
ErhI	CCWWGG	4 cut(s)	231, 284, 1920, 2131
Esp3I	CGTCTC	1 cut(s)	55
FaeI	CATG	6 cut(s)	600, 640, 1133, 1579, 1820, 2135
FalI	AAGNNNNNCTT	6 cut(s)	1106, 1138, 1131, 1163, 1979, 2011
FaqI	GGGAC	4 cut(s)	203, 349, 857, 2076
FatI	CATG	6 cut(s)	596, 636, 1129, 1575, 1816, 2131
FauI	CCCGC	1 cut(s)	764
FbaI	TGATCA	1 cut(s)	1564
FblI	GTMKAC	1 cut(s)	904
Fnu4HI	GCNGC	2 cut(s)	660, 2062
FokI	GGATG	8 cut(s)	248, 466, 470, 497, 766, 771, 1003, 1574
FriOI	GRGCYC	2 cut(s)	1271, 2021
Fsp4HI	GCNGC	2 cut(s)	660, 2062
FspBI	CTAG	4 cut(s)	1608, 1782, 2001, 2058
GluI	GCNGC	2 cut(s)	660, 2062
GsaI	CCCAGC	2 cut(s)	843, 990
GsuI	CTGGAG	1 cut(s)	1510
HaeIII	GGCC	5 cut(s)	1212, 1269, 1365, 1856, 1926
HapII	CCGG	2 cut(s)	221, 2174
HgaI	GACGC	1 cut(s)	1070
Hin1I	GRCGYC	2 cut(s)	1081, 2078
Hin1II	CATG	6 cut(s)	600, 640, 1133, 1579, 1820, 2135
HincII	GTYRAC	1 cut(s)	1886
HindII	GTYRAC	1 cut(s)	1886
HindIII	AAGCTT	1 cut(s)	2178
HinfI	GANTC	9 cut(s)	476, 533, 625, 1022, 1276, 1294, 1523, 1604, 1976
HpaII	CCGG	2 cut(s)	221, 2174
HphI	GGTGA	7 cut(s)	63, 76, 876, 980, 1059, 1095, 1484
Hpy166II	GTNNAC	4 cut(s)	572, 905, 1886, 2045
Hpy8I	GTNNAC	4 cut(s)	572, 905, 1886, 2045
HpyAV	CCTTC	7 cut(s)	294, 616, 754, 854, 1443, 1552, 2079
HpyCH4III	ACNGT	6 cut(s)	196, 551, 581, 1321, 1779, 2031
HpyCH4IV	ACGT	1 cut(s)	2078
HpyCH4V	TGCA	6 cut(s)	509, 659, 716, 1283, 1315, 1619
HpyF10VI	GCNNNNNNNGC	1 cut(s)	665
HpyF3I	CTNAG	8 cut(s)	88, 315, 360, 1242, 1351, 1404, 1710, 2181
HpySE526I	ACGT	1 cut(s)	2078
Hsp92I	GRCGYC	2 cut(s)	1081, 2078
Hsp92II	CATG	6 cut(s)	600, 640, 1133, 1579, 1820, 2135
Ksp22I	TGATCA	1 cut(s)	1564
Kzo9I	GATC	5 cut(s)	34, 616, 1032, 1550, 1564
LmnI	GCTCC	2 cut(s)	2016, 2155
Lsp1109I	GCAGC	2 cut(s)	671, 2073
LweI	GCATC	3 cut(s)	496, 577, 981
MaeI	CTAG	4 cut(s)	1608, 1782, 2001, 2058
MaeII	ACGT	1 cut(s)	2078
MaeIII	GTNAC	9 cut(s)	82, 424, 434, 629, 1065, 1094, 1249, 1341, 1649
MalI	GATC	5 cut(s)	36, 618, 1034, 1552, 1566
MbiI	CCGCTC	1 cut(s)	771
MboI	GATC	5 cut(s)	34, 616, 1032, 1550, 1564
MfeI	CAATTG	1 cut(s)	2106
MflI	RGATCY	3 cut(s)	34, 616, 1550
MhlI	GDGCHC	3 cut(s)	186, 1271, 2021
MlsI	TGGCCA	1 cut(s)	1856
MluNI	TGGCCA	1 cut(s)	1856
MlyI	GAGTC	4 cut(s)	619, 1285, 1517, 1985
MmeI	TCCRAC	1 cut(s)	1050
Mox20I	TGGCCA	1 cut(s)	1856
MroXI	GAANNNNTTC	1 cut(s)	1122
MscI	TGGCCA	1 cut(s)	1856
MseI	TTAA	8 cut(s)	39, 393, 444, 777, 792, 1698, 1766, 2112
Msp20I	TGGCCA	1 cut(s)	1856
MspI	CCGG	2 cut(s)	221, 2174
MspR9I	CCNGG	6 cut(s)	189, 221, 222, 297, 700, 1272
MunI	CAATTG	1 cut(s)	2106
Mva1269I	GAATGC	3 cut(s)	316, 958, 1124
MvaI	CCWGG	4 cut(s)	189, 297, 700, 1272
MwoI	GCNNNNNNNGC	1 cut(s)	665
NciI	CCSGG	2 cut(s)	221, 222
NcoI	CCATGG	1 cut(s)	2131
NdeII	GATC	5 cut(s)	34, 616, 1032, 1550, 1564
NheI	GCTAGC	1 cut(s)	2057
NlaIII	CATG	6 cut(s)	600, 640, 1133, 1579, 1820, 2135
NlaIV	GGNNCC	4 cut(s)	185, 604, 1269, 2092
NmuCI	GTSAC	5 cut(s)	82, 434, 629, 1065, 1341
NspV	TTCGAA	1 cut(s)	2072
PaeR7I	CTCGAG	1 cut(s)	2011
PagI	TCATGA	2 cut(s)	636, 1129
PasI	CCCWGGG	1 cut(s)	1271
PcsI	WCGNNNNNNNCGW	1 cut(s)	1733
PctI	GAATGC	3 cut(s)	316, 958, 1124
PdmI	GAANNNNTTC	1 cut(s)	1122
PfeI	GAWTC	5 cut(s)	476, 533, 1022, 1294, 1604
PkrI	GCNGC	2 cut(s)	661, 2063
PleI	GAGTC	4 cut(s)	619, 1284, 1517, 1984
PpsI	GAGTC	4 cut(s)	619, 1284, 1517, 1984
PsiI	TTATAA	1 cut(s)	546
Psp124BI	GAGCTC	1 cut(s)	2021
Psp6I	CCWGG	4 cut(s)	187, 295, 698, 1270
PspEI	GGTNACC	1 cut(s)	1065
PspFI	CCCAGC	2 cut(s)	839, 986
PspGI	CCWGG	4 cut(s)	187, 295, 698, 1270
PspN4I	GGNNCC	4 cut(s)	185, 604, 1269, 2092
PspOMI	GGGCCC	1 cut(s)	1267
PspPI	GGNCC	9 cut(s)	173, 581, 1210, 1267, 1268, 1363, 1924, 1949, 2090
PspXI	VCTCGAGB	1 cut(s)	2011
PstI	CTGCAG	1 cut(s)	661
PstNI	CAGNNNCTG	1 cut(s)	194
PsuI	RGATCY	3 cut(s)	34, 616, 1550
RsaI	GTAC	4 cut(s)	193, 280, 381, 1379
RsaNI	GTAC	4 cut(s)	192, 279, 380, 1378
SacI	GAGCTC	1 cut(s)	2021
SaqAI	TTAA	8 cut(s)	39, 393, 444, 777, 792, 1698, 1766, 2112
SatI	GCNGC	2 cut(s)	660, 2062
Sau3AI	GATC	5 cut(s)	34, 616, 1032, 1550, 1564
Sau96I	GGNCC	9 cut(s)	173, 581, 1210, 1267, 1268, 1363, 1924, 1949, 2090
SchI	GAGTC	4 cut(s)	619, 1285, 1517, 1985
ScrFI	CCNGG	6 cut(s)	189, 221, 222, 297, 700, 1272
SduI	GDGCHC	3 cut(s)	186, 1271, 2021
SfaNI	GCATC	3 cut(s)	496, 577, 981
SfcI	CTRYAG	3 cut(s)	75, 550, 657
Sfr274I	CTCGAG	1 cut(s)	2011
SfuI	TTCGAA	1 cut(s)	2072
SinI	GGWCC	4 cut(s)	173, 581, 1949, 2090
SlaI	CTCGAG	1 cut(s)	2011
SmaI	CCCGGG	1 cut(s)	222
SmlI	CTYRAG	2 cut(s)	735, 2011
SmoI	CTYRAG	2 cut(s)	735, 2011
SsiI	CCGC	3 cut(s)	293, 771, 2143
SspMI	CTAG	4 cut(s)	1608, 1782, 2001, 2058
SstI	GAGCTC	1 cut(s)	2021
StyD4I	CCNGG	6 cut(s)	187, 219, 220, 295, 698, 1270
StyI	CCWWGG	4 cut(s)	231, 284, 1920, 2131
TaaI	ACNGT	6 cut(s)	196, 551, 581, 1321, 1779, 2031
TaiI	ACGT	1 cut(s)	2081
TaqI	TCGA	7 cut(s)	524, 1111, 1204, 1337, 1727, 2012, 2072
TatI	WGTACW	2 cut(s)	379, 1377
TfiI	GAWTC	5 cut(s)	476, 533, 1022, 1294, 1604
Tru1I	TTAA	8 cut(s)	39, 393, 444, 777, 792, 1698, 1766, 2112
Tru9I	TTAA	8 cut(s)	39, 393, 444, 777, 792, 1698, 1766, 2112
TscAI	CASTG	3 cut(s)	183, 937, 2036
TseFI	GTSAC	5 cut(s)	82, 434, 629, 1065, 1341
TseI	GCWGC	2 cut(s)	659, 2061
Tsp45I	GTSAC	5 cut(s)	82, 434, 629, 1065, 1341
TspMI	CCCGGG	1 cut(s)	220
TspRI	CASTG	3 cut(s)	183, 937, 2036
VpaK11BI	GGWCC	4 cut(s)	173, 581, 1949, 2090
XagI	CCTNNNNNAGG	1 cut(s)	446
XapI	RAATTY	6 cut(s)	244, 1171, 1398, 1613, 1693, 1898
XbaI	TCTAGA	1 cut(s)	1781
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1849, 1977
XhoI	CTCGAG	1 cut(s)	2011
XmaI	CCCGGG	1 cut(s)	220
XmiI	GTMKAC	1 cut(s)	904
XmnI	GAANNNNTTC	1 cut(s)	1122
XspI	CTAG	4 cut(s)	1608, 1782, 2001, 2058
ZraI	GACGTC	1 cut(s)	2079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.