Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g31990 FvH4_4g31991 |
| prunus_persica | Prupe.1G094800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0404041 RchiOBHm_Chr4g0404051 RchiOBHm_Chr4g0404091 |
| rosa_laevigata | RLG00000008926 RLG00000008930 RLG00000008933 |
| rosa_multiflora | Rmu_co8105392.1_g000001 Rmu_co8272517.1_g000001 Rmu_sc0001999.1_g000001 Rmu_sc0003483.1_g000002 Rmu_sc0006579.1_g000005 Rmu_sc0009977.1_g000001 Rmu_sc0020288.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00348610 |
| rosa_rugosa | Rorug04G0046800 |
| rosa_samantha | Rh4AG121900 Rh4AG122500 Rh4BG115600 Rh4BG115700 Rh4CG130900 Rh4CG131000 Rh4DG115800 |
| rosa_wichuraiana | Rw4G009970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 22 |
| AcsI | RAATTY | 2 cut(s) | 41, 236 |
| AfaI | GTAC | 1 cut(s) | 12 |
| AgsI | TTSAA | 1 cut(s) | 232 |
| AluBI | AGCT | 1 cut(s) | 87 |
| AluI | AGCT | 1 cut(s) | 87 |
| ApoI | RAATTY | 2 cut(s) | 41, 236 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 60 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 95, 127 |
| BbsI | GAAGAC | 1 cut(s) | 103 |
| BfmI | CTRYAG | 1 cut(s) | 246 |
| BfuAI | ACCTGC | 1 cut(s) | 22 |
| BmsI | GCATC | 1 cut(s) | 232 |
| BpiI | GAAGAC | 1 cut(s) | 103 |
| BseGI | GGATG | 1 cut(s) | 285 |
| BsgI | GTGCAG | 2 cut(s) | 138, 213 |
| BslFI | GGGAC | 1 cut(s) | 211 |
| BsmFI | GGGAC | 1 cut(s) | 211 |
| Bsp143I | GATC | 1 cut(s) | 208 |
| BspMI | ACCTGC | 1 cut(s) | 22 |
| BssMI | GATC | 1 cut(s) | 208 |
| Bst4CI | ACNGT | 1 cut(s) | 32 |
| BstDEI | CTNAG | 3 cut(s) | 35, 81, 124 |
| BstF5I | GGATG | 1 cut(s) | 285 |
| BstKTI | GATC | 1 cut(s) | 211 |
| BstMBI | GATC | 1 cut(s) | 208 |
| BstNSI | RCATGY | 1 cut(s) | 303 |
| BstSFI | CTRYAG | 1 cut(s) | 246 |
| BstV2I | GAAGAC | 1 cut(s) | 103 |
| BtsCI | GGATG | 1 cut(s) | 285 |
| BtsI | GCAGTG | 1 cut(s) | 267 |
| BtsIMutI | CAGTG | 1 cut(s) | 267 |
| BveI | ACCTGC | 1 cut(s) | 22 |
| Csp6I | GTAC | 1 cut(s) | 11 |
| CviAII | CATG | 1 cut(s) | 300 |
| CviJI | RGCY | 2 cut(s) | 79, 87 |
| CviKI_1 | RGCY | 2 cut(s) | 79, 87 |
| CviQI | GTAC | 1 cut(s) | 11 |
| DdeI | CTNAG | 3 cut(s) | 35, 81, 124 |
| DpnI | GATC | 1 cut(s) | 210 |
| DpnII | GATC | 1 cut(s) | 208 |
| FaeI | CATG | 1 cut(s) | 303 |
| FaiI | YATR | 7 cut(s) | 25, 27, 47, 105, 204, 288, 301 |
| FaqI | GGGAC | 1 cut(s) | 211 |
| FatI | CATG | 1 cut(s) | 299 |
| FauNDI | CATATG | 1 cut(s) | 25 |
| FokI | GGATG | 1 cut(s) | 292 |
| Hin1II | CATG | 1 cut(s) | 303 |
| Hpy166II | GTNNAC | 1 cut(s) | 11 |
| Hpy188III | TCNNGA | 1 cut(s) | 183 |
| Hpy8I | GTNNAC | 1 cut(s) | 11 |
| HpyCH4III | ACNGT | 1 cut(s) | 32 |
| HpyCH4V | TGCA | 4 cut(s) | 119, 143, 194, 303 |
| HpyF3I | CTNAG | 3 cut(s) | 35, 81, 124 |
| Hsp92II | CATG | 1 cut(s) | 303 |
| Kzo9I | GATC | 1 cut(s) | 208 |
| LpnPI | CCDG | 3 cut(s) | 27, 78, 180 |
| LweI | GCATC | 1 cut(s) | 232 |
| MaeIII | GTNAC | 1 cut(s) | 19 |
| MalI | GATC | 1 cut(s) | 210 |
| MboI | GATC | 1 cut(s) | 208 |
| MboII | GAAGA | 3 cut(s) | 61, 103, 203 |
| MluCI | AATT | 3 cut(s) | 41, 236, 292 |
| MnlI | CCTC | 2 cut(s) | 75, 181 |
| MroXI | GAANNNNTTC | 1 cut(s) | 60 |
| MseI | TTAA | 2 cut(s) | 225, 291 |
| MslI | CAYNNNNRTG | 1 cut(s) | 72 |
| NdeI | CATATG | 1 cut(s) | 25 |
| NdeII | GATC | 1 cut(s) | 208 |
| NlaIII | CATG | 1 cut(s) | 303 |
| NspI | RCATGY | 1 cut(s) | 303 |
| PdmI | GAANNNNTTC | 1 cut(s) | 60 |
| RsaI | GTAC | 1 cut(s) | 12 |
| RsaNI | GTAC | 1 cut(s) | 11 |
| RseI | CAYNNNNRTG | 1 cut(s) | 72 |
| SaqAI | TTAA | 2 cut(s) | 225, 291 |
| Sau3AI | GATC | 1 cut(s) | 208 |
| SetI | ASST | 3 cut(s) | 16, 89, 311 |
| SfaNI | GCATC | 1 cut(s) | 232 |
| SfcI | CTRYAG | 1 cut(s) | 246 |
| SgeI | CNNG | 9 cut(s) | 26, 105, 112, 128, 166, 195, 207, 232, 312 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 72 |
| Sse9I | AATT | 3 cut(s) | 41, 236, 292 |
| TaaI | ACNGT | 1 cut(s) | 32 |
| TaqI | TCGA | 1 cut(s) | 99 |
| TasI | AATT | 3 cut(s) | 41, 236, 292 |
| Tru1I | TTAA | 2 cut(s) | 225, 291 |
| Tru9I | TTAA | 2 cut(s) | 225, 291 |
| TscAI | CASTG | 1 cut(s) | 274 |
| TspDTI | ATGAA | 3 cut(s) | 62, 148, 168 |
| TspGWI | ACGGA | 1 cut(s) | 104 |
| TspRI | CASTG | 1 cut(s) | 274 |
| XapI | RAATTY | 2 cut(s) | 41, 236 |
| XceI | RCATGY | 1 cut(s) | 303 |
| XmnI | GAANNNNTTC | 1 cut(s) | 60 |