RchiOBHm_Chr2g0109991

Glycine-rich domain-containing protein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0002521
Physical Location & Seq
Reverse (-)
21342234 .. 21347610
5377 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2562 bp
ATGGAGATGGAGATGGAGATGAAGGGACAGGAGCTTGAGTGGACCAAAGCGCAGAGCATTGGAATAAGCGTAGACCTTGTGGCTGCAGCAAAAAAGCAGCTTCAGTTTCTTGCTGCTGTTGATAGGAATCGGTATCTGTACGAAGGGCCGGCTCTTAACAGGGCTATCTATAGGTACAACGCTTGTTGGCTTCCATTGCTTGCCAAACATTCAGACTCCCAGGTTTCTGAGGGACCTTTGGTTGTACCTCTTGATTGTGAATGGATTTGGCATTGTCACAGGCTAAATCCGGTTCGATACAAGACTGACTGTGAAGAACTTTATGGAAAGATTCTTGACAACTCGAATGTTGTTTCCTCTGTTGAAGGTTCTTGTAAAAGTAAAACTGAAGAAATTTGGAATAGTCTGTATCCAGCAGAACCCTACAACTTCAACTTACAAAAGGCATTGTCCGAGGATATATCTGAAAGGATTTCCAAACTTGACAAATGCACCAAATATGATCTGGTTTCAGCCGTTAAAAGACAATCTCCTTTCTTTTACCAGGTATCTCCACCCCATATGAACCATGATCTGTTTCTTGAAGAAGCTGTGTCTAGATATAAAGGGTTTCTTCATTTAATCAAGAGCAATAATGAGAAGTCTCTACGACGTTTCTGCGTTCCGACATATGATATTGATCTTATCTGGCATACTCACCAATTGCATCCTGTATCCTATTGTAAAGATCTGCATGAACTACTTGGAAAAGTATTGGAGCATGATGACATGGATTCGGACAGAACTAAAGGGAAGAAGCTGGATACTGGGTTCTCTGTAACCACCAAGCAATGGGAAGATGCATTTGGTACCAGGTATTGGAGAGCAGGGGCAATGTATAGAGGCAGGGCTCCATCTCCTCTCACAACCACTCCTTATCAGTCTAACTTCACTAGCAAGGATGTAATTGCATGTCCTGATCATCAGAAAGTAATTGAGCTTCCAGAGGTGAAAGCTGTGGAGGTCCTTTTGGAGTTTCTGGAAGTTAGGAACTTACCAGAAGGACACAAAGGGCTTCTCTTTGCCTCATTCAGTAAGACAACAAAGGATATATTTTTCAATGCTAAGCGGCGACTCAGCATTTTTTCTGAGTTTGAAGAGAAACAGGTTGCTTCTTTCCAGTGTGAACCTACTGGAGAGCTGCTTTTTGAACTCATGTCCCATTCACCTTTATATATACCAATGAAAAGGGCATATAAAACATTAGGTTCTGCTTCGTTCTCTCTTCAAGACTGTCTAGTCCCACCCTCTAAATTATATGCAGAAAAATGGTTAGAGATGGTGCCAAGCTCTAAAGTTGGGAACTTAAAACCAATCTACATGCGGTTCGCTATGTCTTTTACTATTCCAACCATAGCACAACACACACTTCATGTGGTTCGTTCTCGACCGTTTTCAAAAAGTTCTTGCTTTTTCCCCTTTGCTGGGAAGAATCAAGATGCCAAGAATTGGACACAAGTGATTGATGAAACTGGAACAGAGGTCCTCCGCCTGCAAATGAGGGATACTGAAAAGGAAAAGGTAAAGGGAATCAGCGTTCCAAGGAAAGAGGTGGTTGGAATTACCAAGTCTGGCAAAATATGTACTCTTGCAGAATTTGTGGGGACTGGTTGGTCTTTGATAGATTCACACTGGTCCCTTCATCGCGAGAAAAATTCCGAGGGATACCTCTTTTTGCTAAAGGGAAAAAAGATGGTCAAATTCTTCCCAGGCAGAAAGCTGGATTATGAACATAAGCATTATGAGGAAAATACAACTGAAGATAAAACTGAACAACACTTCATGACCTTAGTTGAATTCTCTGCTGAAGATCCTTATGGCAAAGCAGTGGCATTGCTTGACCTAAAATCTGGGTGCATCAAGGTAAAGGAAGAATCCATAACAGTTCCTGGGGTCATAGTGGCTTTTATACTGTCGGATAAGCTAAAGAAGGAAAGATATGACGGGTTTGCTGTTAACCCCGCGGAGATGGGTAGTGTCAAGGAAGAAATTAAAGCGAACCCTGAGGAAGGCAAAGGCACCAACTTGAGCTCTTCTGGAGCAAGTGTAGTTAACCTTAAATCTGAGGTGGTTGAAGGAAATGTAGTGACGTCTCAAAAAGGTGGAGGCTGTGGTGGAGCATGTGGCAGTGGATGTGGAAATGCAACAAGGAGTGCCGGCGCTGGTGGATGTGGAAGTGGTTGTGGTGGAGGATGTGGAAACATGGAGAAGAGTAGCGCTTGCGGCAGTGGATGTGGTGGAGGATGTGGAAACTTGGTGAAGAGTGGCGGCTGTGGTGGTGGCTGTGGAGGTGGCTGTGGTGGTGGCTGTGGAGGTGGTTGTGGAAACATACTGAAGAGTGGTGGCTGTGGTGGCTGTGGCGGCGGCTGTGGGAACATACTGAAGAGTGGTGGCTGCGGTGGGTGTGGTGGTAGCGGTGGTTGTGGTAGTGGGTGCGGAGGCATATTCAAGGGTAATGGTTATCATGAAAATACATCTGGTAACTCATGTGCCGAAGACCACCCAAAGGCAGTAGTTGTTTAA

Protein Analysis

853

Amino Acids

93.04

Weight (kDa)

7.9

Isoelectric Point (pI)

41.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRDP-like PF07173 12 - 103 3e-09 Glycine-rich domain-containing protein-like
GRDP-like PF07173 99 - 243 1.2e-58 Glycine-rich domain-containing protein-like
C2_GRDP PF25334 330 - 462 7.7e-54 C2 domain of glycine-rich domain-containing protein
GRDP_C PF25335 500 - 635 1.7e-36 Glycine Rich Domain Protein C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1277, 1651
AatII GACGTC 1 cut(s) 2132
Acc65I GGTACC 1 cut(s) 848
AccB1I GGYRCC 3 cut(s) 848, 1321, 2057
AccB7I CCANNNNNTGG 3 cut(s) 831, 858, 1488
AccI GTMKAC 1 cut(s) 72
AccII CGCG 2 cut(s) 1686, 2003
AclWI GGATC 1 cut(s) 1844
AcsI RAATTY 5 cut(s) 393, 1634, 1693, 1739, 1835
AcuI CTGAAG 6 cut(s) 86, 408, 1818, 1866, 2393, 2441
AcyI GRCGYC 1 cut(s) 2129
AfaI GTAC 5 cut(s) 140, 176, 246, 850, 1624
AfeI AGCGCT 1 cut(s) 2257
AfiI CCNNNNNNNGG 7 cut(s) 831, 858, 1463, 1464, 1488, 2048, 2545
AjnI CCWGG 5 cut(s) 219, 543, 851, 1747, 1927
AjuI GAANNNNNNNTTGG 2 cut(s) 828, 860
AloI GAACNNNNNNTCC 4 cut(s) 794, 826, 1560, 1592
Alw21I GWGCWC 1 cut(s) 2072
Alw26I GTCTC 2 cut(s) 648, 2136
AlwI GGATC 1 cut(s) 1844
AlwNI CAGNNNCTG 1 cut(s) 1928
Aor51HI AGCGCT 1 cut(s) 2257
AoxI GGCC 1 cut(s) 146
ApeKI GCWGC 6 cut(s) 83, 86, 97, 113, 1180, 2433
ApoI RAATTY 5 cut(s) 393, 1634, 1693, 1739, 1835
Asp718I GGTACC 1 cut(s) 848
AspLEI GCGC 3 cut(s) 52, 2201, 2258
AspS9I GGNCC 6 cut(s) 42, 146, 233, 1003, 1522, 1674
AsuHPI GGTGA 4 cut(s) 689, 1000, 1197, 2308
AvaII GGWCC 5 cut(s) 42, 233, 1003, 1522, 1674
AxyI CCTNAGG 1 cut(s) 2043
BanI GGYRCC 3 cut(s) 848, 1321, 2057
BanII GRGCYC 2 cut(s) 892, 2072
BarI GAAGNNNNNNTAC 2 cut(s) 963, 995
BbsI GAAGAC 1 cut(s) 2541
Bbv12I GWGCWC 1 cut(s) 2072
BbvI GCAGC 6 cut(s) 70, 98, 100, 109, 1167, 2420
BccI CCATC 5 cut(s) 7, 901, 1312, 1726, 2002
BceAI ACGGC 1 cut(s) 500
BcgI CGANNNNNNTGC 2 cut(s) 639, 673
BciT130I CCWGG 5 cut(s) 221, 545, 853, 1749, 1929
BciVI GTATCC 5 cut(s) 420, 724, 796, 1537, 1697
BclI TGATCA 1 cut(s) 958
BcoDI GTCTC 2 cut(s) 648, 2136
BfaI CTAG 3 cut(s) 597, 933, 1277
BfmI CTRYAG 2 cut(s) 84, 169
BfoI RGCGCY 2 cut(s) 2202, 2259
BfuI GTATCC 5 cut(s) 420, 724, 796, 1537, 1697
BglII AGATCT 1 cut(s) 727
BlpI GCTNAGC 1 cut(s) 1104
Bme1390I CCNGG 5 cut(s) 221, 545, 853, 1749, 1929
Bme18I GGWCC 5 cut(s) 42, 233, 1003, 1522, 1674
BmgT120I GGNCC 6 cut(s) 42, 146, 233, 1003, 1522, 1674
BmiI GGNNCC 6 cut(s) 234, 850, 891, 1323, 1676, 2059
BmrFI CCNGG 5 cut(s) 221, 545, 853, 1749, 1929
BmrI ACTGGG 1 cut(s) 816
BmsI GCATC 4 cut(s) 715, 829, 1468, 1905
BmuI ACTGGG 1 cut(s) 816
BpiI GAAGAC 1 cut(s) 2541
BpmI CTGGAG 2 cut(s) 1194, 2097
Bpu1102I GCTNAGC 1 cut(s) 1104
BpuEI CTTGAG 2 cut(s) 56, 2086
BsaBI GATNNNNATC 2 cut(s) 126, 678
BsaHI GRCGYC 1 cut(s) 2129
BsaJI CCNNGG 7 cut(s) 219, 453, 1580, 1698, 1747, 1928, 2001
BsaWI WCCGGW 1 cut(s) 289
BsaXI ACNNNNNCTCC 6 cut(s) 23, 53, 895, 925, 2070, 2100
Bsc4I CCNNNNNNNGG 7 cut(s) 831, 858, 1463, 1464, 1488, 2048, 2545
Bse118I RCCGGY 2 cut(s) 148, 2195
Bse1I ACTGG 6 cut(s) 811, 1159, 1177, 1516, 1651, 1676
Bse21I CCTNAGG 1 cut(s) 2043
Bse3DI GCAATG 4 cut(s) 194, 836, 879, 1871
Bse8I GATNNNNATC 2 cut(s) 126, 678
BseBI CCWGG 5 cut(s) 221, 545, 853, 1749, 1929
BseDI CCNNGG 7 cut(s) 219, 453, 1580, 1698, 1747, 1928, 2001
BseGI GGATG 7 cut(s) 706, 946, 2177, 2213, 2237, 2276, 2288
BseJI GATNNNNATC 2 cut(s) 126, 678
BseLI CCNNNNNNNGG 7 cut(s) 831, 858, 1463, 1464, 1488, 2048, 2545
BseMI GCAATG 4 cut(s) 194, 836, 879, 1871
BseMII CTCAG 5 cut(s) 219, 1119, 1129, 2034, 2094
BseNI ACTGG 6 cut(s) 811, 1159, 1177, 1516, 1651, 1676
BseRI GAGGAG 1 cut(s) 888
BseXI GCAGC 6 cut(s) 70, 98, 100, 109, 1167, 2420
BseYI CCCAGC 1 cut(s) 1463
Bsh1236I CGCG 2 cut(s) 1686, 2003
Bsh1285I CGRYCG 1 cut(s) 1430
BshFI GGCC 1 cut(s) 148
BshNI GGYRCC 3 cut(s) 848, 1321, 2057
BsiEI CGRYCG 1 cut(s) 1430
BsiHKAI GWGCWC 1 cut(s) 2072
BsiSI CCGG 3 cut(s) 149, 290, 2196
BslFI GGGAC 6 cut(s) 39, 246, 1183, 1265, 1657, 1660
BslI CCNNNNNNNGG 7 cut(s) 831, 858, 1463, 1464, 1488, 2048, 2545
BsmAI GTCTC 2 cut(s) 648, 2136
BsmBI CGTCTC 1 cut(s) 2136
BsmFI GGGAC 6 cut(s) 39, 246, 1183, 1265, 1657, 1660
BsnI GGCC 1 cut(s) 148
Bsp1286I GDGCHC 2 cut(s) 892, 2072
Bsp143I GATC 6 cut(s) 502, 571, 679, 727, 958, 1849
Bsp1720I GCTNAGC 1 cut(s) 1104
Bsp68I TCGCGA 1 cut(s) 1686
BspANI GGCC 1 cut(s) 148
BspCNI CTCAG 5 cut(s) 220, 1120, 1128, 2035, 2095
BspFNI CGCG 2 cut(s) 1686, 2003
BspHI TCATGA 2 cut(s) 1821, 2503
BspLI GGNNCC 6 cut(s) 234, 850, 891, 1323, 1676, 2059
BspMAI CTGCAG 1 cut(s) 88
BspPI GGATC 1 cut(s) 1844
BspQI GCTCTTC 1 cut(s) 2077
BspT107I GGYRCC 3 cut(s) 848, 1321, 2057
BsrDI GCAATG 4 cut(s) 194, 836, 879, 1871
BsrFI RCCGGY 2 cut(s) 148, 2195
BsrI ACTGG 6 cut(s) 811, 1159, 1177, 1516, 1651, 1676
BssAI RCCGGY 2 cut(s) 148, 2195
BssECI CCNNGG 7 cut(s) 219, 453, 1580, 1698, 1747, 1928, 2001
BssMI GATC 6 cut(s) 502, 571, 679, 727, 958, 1849
BssNI GRCGYC 1 cut(s) 2129
BssT1I CCWWGG 1 cut(s) 1580
Bst2UI CCWGG 5 cut(s) 221, 545, 853, 1749, 1929
Bst4CI ACNGT 5 cut(s) 311, 1274, 1431, 1924, 1953
Bst6I CTCTTC 7 cut(s) 1131, 1269, 2077, 2243, 2294, 2369, 2417
BstACI GRCGYC 1 cut(s) 2129
BstC8I GCNNGC 5 cut(s) 150, 201, 1532, 2197, 2260
BstDEI CTNAG 7 cut(s) 228, 1104, 1115, 1128, 1828, 2043, 2103
BstDSI CCRYGG 1 cut(s) 2001
BstENI CCTNNNNNAGG 1 cut(s) 2046
BstF5I GGATG 7 cut(s) 706, 946, 2177, 2213, 2237, 2276, 2288
BstFNI CGCG 2 cut(s) 1686, 2003
BstH2I RGCGCY 2 cut(s) 2202, 2259
BstHHI GCGC 3 cut(s) 52, 2201, 2258
BstKTI GATC 6 cut(s) 505, 574, 682, 730, 961, 1852
BstMAI GTCTC 2 cut(s) 648, 2136
BstMBI GATC 6 cut(s) 502, 571, 679, 727, 958, 1849
BstMCI CGRYCG 1 cut(s) 1430
BstMWI GCNNNNNNNGC 4 cut(s) 196, 2262, 2391, 2400
BstNI CCWGG 5 cut(s) 221, 545, 853, 1749, 1929
BstNSI RCATGY 3 cut(s) 954, 1363, 2163
BstSCI CCNGG 5 cut(s) 219, 543, 851, 1747, 1927
BstSFI CTRYAG 2 cut(s) 84, 169
BstUI CGCG 2 cut(s) 1686, 2003
BstV1I GCAGC 6 cut(s) 70, 98, 100, 109, 1167, 2420
BstV2I GAAGAC 1 cut(s) 2541
BstX2I RGATCY 2 cut(s) 727, 1849
BstYI RGATCY 2 cut(s) 727, 1849
Bsu36I CCTNAGG 1 cut(s) 2043
BsuI GTATCC 5 cut(s) 420, 724, 796, 1537, 1697
BsuRI GGCC 1 cut(s) 148
BtgI CCRYGG 1 cut(s) 2001
BtgZI GCGATG 1 cut(s) 1667
BtsCI GGATG 7 cut(s) 706, 946, 2177, 2213, 2237, 2276, 2288
BtsI GCAGTG 3 cut(s) 1872, 2173, 2272
BtsIMutI CAGTG 5 cut(s) 1166, 1669, 1872, 2173, 2272
BtuMI TCGCGA 1 cut(s) 1686
Cac8I GCNNGC 5 cut(s) 150, 201, 1532, 2197, 2260
CaiI CAGNNNCTG 1 cut(s) 1928
CciI TCATGA 2 cut(s) 1821, 2503
CfoI GCGC 3 cut(s) 52, 2201, 2258
Cfr10I RCCGGY 2 cut(s) 148, 2195
Cfr13I GGNCC 6 cut(s) 42, 146, 233, 1003, 1522, 1674
Cfr42I CCGCGG 1 cut(s) 2004
CsiI ACCWGGT 2 cut(s) 543, 851
Csp6I GTAC 5 cut(s) 139, 175, 245, 849, 1623
CviQI GTAC 5 cut(s) 139, 175, 245, 849, 1623
DdeI CTNAG 7 cut(s) 228, 1104, 1115, 1128, 1828, 2043, 2103
DpnI GATC 6 cut(s) 504, 573, 681, 729, 960, 1851
DpnII GATC 6 cut(s) 502, 571, 679, 727, 958, 1849
DrdI GACNNNNNNGTC 2 cut(s) 1277, 1651
DseDI GACNNNNNNGTC 2 cut(s) 1277, 1651
Eam1104I CTCTTC 7 cut(s) 1131, 1269, 2077, 2243, 2294, 2369, 2417
EarI CTCTTC 7 cut(s) 1131, 1269, 2077, 2243, 2294, 2369, 2417
EciI GGCGGA 1 cut(s) 1517
Ecl136II GAGCTC 1 cut(s) 2070
Eco130I CCWWGG 1 cut(s) 1580
Eco24I GRGCYC 2 cut(s) 892, 2072
Eco47I GGWCC 5 cut(s) 42, 233, 1003, 1522, 1674
Eco47III AGCGCT 1 cut(s) 2257
Eco53kI GAGCTC 1 cut(s) 2070
Eco57I CTGAAG 6 cut(s) 86, 408, 1818, 1866, 2393, 2441
Eco81I CCTNAGG 1 cut(s) 2043
EcoICRI GAGCTC 1 cut(s) 2070
EcoNI CCTNNNNNAGG 1 cut(s) 2046
EcoO109I RGGNCCY 3 cut(s) 233, 1003, 1522
EcoRI GAATTC 1 cut(s) 1835
EcoRII CCWGG 5 cut(s) 219, 543, 851, 1747, 1927
EcoT14I CCWWGG 1 cut(s) 1580
EcoT22I ATGCAT 1 cut(s) 844
EcoT38I GRGCYC 2 cut(s) 892, 2072
ErhI CCWWGG 1 cut(s) 1580
Esp3I CGTCTC 1 cut(s) 2136
FalI AAGNNNNNCTT 2 cut(s) 597, 629
FaqI GGGAC 6 cut(s) 39, 246, 1183, 1265, 1657, 1660
FauI CCCGC 1 cut(s) 2008
FauNDI CATATG 2 cut(s) 561, 670
FbaI TGATCA 1 cut(s) 958
FblI GTMKAC 1 cut(s) 72
FokI GGATG 7 cut(s) 693, 953, 2184, 2220, 2244, 2283, 2295
FriOI GRGCYC 2 cut(s) 892, 2072
FspBI CTAG 3 cut(s) 597, 933, 1277
GlaI GCGC 3 cut(s) 51, 2200, 2257
GsaI CCCAGC 1 cut(s) 1467
GsuI CTGGAG 2 cut(s) 1194, 2097
HaeII RGCGCY 2 cut(s) 2202, 2259
HaeIII GGCC 1 cut(s) 148
HapII CCGG 3 cut(s) 149, 290, 2196
HhaI GCGC 3 cut(s) 52, 2201, 2258
Hin1I GRCGYC 1 cut(s) 2129
Hin6I GCGC 3 cut(s) 50, 2199, 2256
HinP1I GCGC 3 cut(s) 50, 2199, 2256
HincII GTYRAC 2 cut(s) 1996, 2092
HindII GTYRAC 2 cut(s) 1996, 2092
HinfI GANTC 9 cut(s) 127, 215, 331, 773, 1113, 1471, 1569, 1664, 1913
HpaI GTTAAC 2 cut(s) 1996, 2092
HpaII CCGG 3 cut(s) 149, 290, 2196
HphI GGTGA 4 cut(s) 689, 1000, 1197, 2308
Hpy166II GTNNAC 5 cut(s) 42, 73, 1166, 1996, 2092
Hpy8I GTNNAC 5 cut(s) 42, 73, 1166, 1996, 2092
Hpy99I CGWCG 1 cut(s) 654
HpyAV CCTTC 8 cut(s) 16, 137, 359, 1034, 1688, 1963, 2042, 2108
HpyCH4III ACNGT 5 cut(s) 311, 1274, 1431, 1924, 1953
HpyCH4IV ACGT 2 cut(s) 652, 2129
HpyF10VI GCNNNNNNNGC 4 cut(s) 196, 2262, 2391, 2400
HpyF3I CTNAG 7 cut(s) 228, 1104, 1115, 1128, 1828, 2043, 2103
HpySE526I ACGT 2 cut(s) 652, 2129
Hsp92I GRCGYC 1 cut(s) 2129
HspAI GCGC 3 cut(s) 50, 2199, 2256
KpnI GGTACC 1 cut(s) 852
KroI GCCGGC 2 cut(s) 148, 2195
KroNI GCCGGC 2 cut(s) 150, 2197
Ksp22I TGATCA 1 cut(s) 958
KspAI GTTAAC 2 cut(s) 1996, 2092
KspI CCGCGG 1 cut(s) 2004
Kzo9I GATC 6 cut(s) 502, 571, 679, 727, 958, 1849
LguI GCTCTTC 1 cut(s) 2077
LmnI GCTCC 5 cut(s) 31, 757, 895, 2078, 2156
Lsp1109I GCAGC 6 cut(s) 70, 98, 100, 109, 1167, 2420
LweI GCATC 4 cut(s) 715, 829, 1468, 1905
MabI ACCWGGT 2 cut(s) 543, 851
MaeI CTAG 3 cut(s) 597, 933, 1277
MaeII ACGT 2 cut(s) 652, 2129
MaeIII GTNAC 4 cut(s) 275, 817, 2125, 2519
MalI GATC 6 cut(s) 504, 573, 681, 729, 960, 1851
MboI GATC 6 cut(s) 502, 571, 679, 727, 958, 1849
MfeI CAATTG 1 cut(s) 701
MflI RGATCY 2 cut(s) 727, 1849
MhlI GDGCHC 2 cut(s) 892, 2072
MlyI GAGTC 2 cut(s) 209, 1107
MmeI TCCRAC 4 cut(s) 689, 1412, 1576, 1935
Mph1103I ATGCAT 1 cut(s) 844
MroNI GCCGGC 2 cut(s) 148, 2195
MseI TTAA 9 cut(s) 156, 519, 620, 1346, 1995, 2031, 2091, 2097, 2560
MspA1I CMGCKG 1 cut(s) 2003
MspI CCGG 3 cut(s) 149, 290, 2196
MspR9I CCNGG 5 cut(s) 221, 545, 853, 1749, 1929
MunI CAATTG 1 cut(s) 701
MvaI CCWGG 5 cut(s) 221, 545, 853, 1749, 1929
MvnI CGCG 2 cut(s) 1686, 2003
MwoI GCNNNNNNNGC 4 cut(s) 196, 2262, 2391, 2400
NaeI GCCGGC 2 cut(s) 150, 2197
NdeI CATATG 2 cut(s) 561, 670
NdeII GATC 6 cut(s) 502, 571, 679, 727, 958, 1849
NgoMIV GCCGGC 2 cut(s) 148, 2195
NlaIV GGNNCC 6 cut(s) 234, 850, 891, 1323, 1676, 2059
NmuCI GTSAC 2 cut(s) 275, 2125
NruI TCGCGA 1 cut(s) 1686
NsiI ATGCAT 1 cut(s) 844
NspI RCATGY 3 cut(s) 954, 1363, 2163
PagI TCATGA 2 cut(s) 1821, 2503
PciSI GCTCTTC 1 cut(s) 2077
PdiI GCCGGC 2 cut(s) 150, 2197
PfeI GAWTC 7 cut(s) 127, 331, 773, 1471, 1569, 1664, 1913
PflMI CCANNNNNTGG 3 cut(s) 831, 858, 1488
PleI GAGTC 2 cut(s) 209, 1107
PpsI GAGTC 2 cut(s) 209, 1107
PpuMI RGGWCCY 3 cut(s) 233, 1003, 1522
Psp124BI GAGCTC 1 cut(s) 2072
Psp5II RGGWCCY 3 cut(s) 233, 1003, 1522
Psp6I CCWGG 5 cut(s) 219, 543, 851, 1747, 1927
PspFI CCCAGC 1 cut(s) 1463
PspGI CCWGG 5 cut(s) 219, 543, 851, 1747, 1927
PspN4I GGNNCC 6 cut(s) 234, 850, 891, 1323, 1676, 2059
PspPI GGNCC 6 cut(s) 42, 146, 233, 1003, 1522, 1674
PspPPI RGGWCCY 3 cut(s) 233, 1003, 1522
PstI CTGCAG 1 cut(s) 88
PstNI CAGNNNCTG 1 cut(s) 1928
PsuI RGATCY 2 cut(s) 727, 1849
RruI TCGCGA 1 cut(s) 1686
RsaI GTAC 5 cut(s) 140, 176, 246, 850, 1624
RsaNI GTAC 5 cut(s) 139, 175, 245, 849, 1623
SacI GAGCTC 1 cut(s) 2072
SacII CCGCGG 1 cut(s) 2004
SapI GCTCTTC 1 cut(s) 2077
SaqAI TTAA 9 cut(s) 156, 519, 620, 1346, 1995, 2031, 2091, 2097, 2560
Sau3AI GATC 6 cut(s) 502, 571, 679, 727, 958, 1849
Sau96I GGNCC 6 cut(s) 42, 146, 233, 1003, 1522, 1674
SchI GAGTC 2 cut(s) 209, 1107
ScrFI CCNGG 5 cut(s) 221, 545, 853, 1749, 1929
SduI GDGCHC 2 cut(s) 892, 2072
SexAI ACCWGGT 2 cut(s) 543, 851
SfaNI GCATC 4 cut(s) 715, 829, 1468, 1905
SfcI CTRYAG 2 cut(s) 84, 169
Sfr303I CCGCGG 1 cut(s) 2004
SgrBI CCGCGG 1 cut(s) 2004
SinI GGWCC 5 cut(s) 42, 233, 1003, 1522, 1674
SmlI CTYRAG 2 cut(s) 35, 2065
SmoI CTYRAG 2 cut(s) 35, 2065
SspMI CTAG 3 cut(s) 597, 933, 1277
SstI GAGCTC 1 cut(s) 2072
StyD4I CCNGG 5 cut(s) 219, 543, 851, 1747, 1927
StyI CCWWGG 1 cut(s) 1580
TaaI ACNGT 5 cut(s) 311, 1274, 1431, 1924, 1953
TaiI ACGT 2 cut(s) 655, 2132
TaqI TCGA 3 cut(s) 295, 344, 1426
TatI WGTACW 1 cut(s) 1622
TauI GCSGC 5 cut(s) 1111, 2265, 2310, 2403, 2406
TfiI GAWTC 7 cut(s) 127, 331, 773, 1471, 1569, 1664, 1913
Tru1I TTAA 9 cut(s) 156, 519, 620, 1346, 1995, 2031, 2091, 2097, 2560
Tru9I TTAA 9 cut(s) 156, 519, 620, 1346, 1995, 2031, 2091, 2097, 2560
TscAI CASTG 5 cut(s) 1166, 1676, 1872, 2173, 2272
TseFI GTSAC 2 cut(s) 275, 2125
TseI GCWGC 6 cut(s) 83, 86, 97, 113, 1180, 2433
Tsp45I GTSAC 2 cut(s) 275, 2125
TspRI CASTG 5 cut(s) 1166, 1676, 1872, 2173, 2272
Van91I CCANNNNNTGG 3 cut(s) 831, 858, 1488
VpaK11BI GGWCC 5 cut(s) 42, 233, 1003, 1522, 1674
XagI CCTNNNNNAGG 1 cut(s) 2046
XapI RAATTY 5 cut(s) 393, 1634, 1693, 1739, 1835
XbaI TCTAGA 1 cut(s) 596
XceI RCATGY 3 cut(s) 954, 1363, 2163
XcmI CCANNNNNNNNNTGG 1 cut(s) 502
XmiI GTMKAC 1 cut(s) 72
XspI CTAG 3 cut(s) 597, 933, 1277
ZraI GACGTC 1 cut(s) 2130
Zsp2I ATGCAT 1 cut(s) 844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.