Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0035251.1

Orthogroup ID

OG0002521

Physical Location & Seq

Genomic Coordinates Reverse (-)

499 .. 4796

Gene Structure 4298 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0035251.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2571 bp

atggagatggagatggagaaggaacaggagcttgagtggaccaaagcgcagagcattggaataagcgtagaccttgtcgctgcagcaaaaaagcagcttcagtttcttgctgctgttgataggaatcggtatctgtacgaagggccggctcttaacagggctatctataggtacaacgcttgttggcttccgttgcttgccaaacattcagactcccaggtttctgagggacctttggttgtacctcttgattgtgaatggatttggcattgtcacaggctaaatccggttcgatacaagactgactgtgaagaactttatggaaagattcttgacaactcgaatgttgtttcctctgttgaaggttcttgtaaaagtaaaactgaagaaatttggaatagtctgtatccagcagaaccctaccacttcaacttacaaaaggcattgtccgaggatatatctgaacggatttccaaacttgacaaatgcaccaaatatgatctggtttcagctgttaaaagacaatctcctttcttttaccaggtatctccaccccatatgaaccatgatctgtttcttgaagtagctgcgtctagatataaagggtttcttcatttaatcaagagcaataatgagaagtctctacgacgtttctgcgttccgacatatgatattgatcttatctggcatactcaccaattgcatcctgtatcctattgtaaagatttgcatgaactgcttggaaaggtattggagcatgacgacatggattcggacagaactaaagggaagaagctggatactgggttctctgtaaccaccaagcaatgggaagaggcatttggtaccaggtattggagagcaggggcaatgtatagaggcagggctccatctcctctcacaaccactccttatcagtctaacatcactagcaaggatgtaattgcatgtcctgatcatcagaaagtaattgagcttccagaggtgaaagctgtggaggttcttttggagtttctggaagttaggaacttaccagaaggacacaaagggcttctctttgcctcattcagtaagactacaaaggatatatttttcaatgctaagcggcgactcagcattttttctgagtttggagagaaacaggttgcttctttccagtgtgaacctactggagagctgctttttgaactcatgtcccattcacctttatatataccaatgaaaagggcatataaaacattaggttctgcttcgttctctcttcaagactgtctagtcccaccctctaaattatatgcagaaaaatggttagagatggtgccaagctctaaagttgggaacttaaaaccaatctacatgcgattcgctatgtcttttactattccaaccatagcacaacacacacttcatgtggttcgttctcgaccgttttcaaaaagttcttgttttttcccctttgctgggaagaatcaagatgccaagaattggacacaagtgattgatgaaactggaacagaggtcctccgcctgcaaatgagggatactgaaaaggaaaaggtaaagggaatcagcgttccaaggaaagaggtggttggaattaccaagtctgggaaaatatgtactcttgcagaatttgtggggactggttggtctttgatagattcacactggtcccttcatcgcgagaaaaattccgagggatacctctttttgctaaagggaaaaaagatggtcaaattcttcccaggcagaaagctggattatgaacataagcattatgaggaaaatacaactgaagataaaactgaacaacacttcgtgaccttagttgaattctctgctgaagatccttatggcaaagcagtggcattgcttgacctaaaatctgggtgcatcaaggtaaaggaagaatcaattacagttcctggggtcataatatcttttatactgtcggataagctaaagaaggaaagatatgacgggtttgctgttaaccctgcggagatgggtagtgtcgaggaagaaattaaagagaaccctgaggaaggcaaaggcaccaacttgagctcttctggagcaagtgtagttaaccttaaatctgaggtggttgaaggaaatgtagtgacgtctcaaaaaggtggaggctgtggtggagcatgtggcagtgggtgtggaaatgcaacaaggagtgccggcgctggtggatgtggaagtggttgtggtggaggatgcggaaacatggagaagagtagcgcttgcggcagtggatgtggtggaggatgtggaaacttggtgaagagtggcggctgtggtggtggctgtggaggtggctgtggtggtggctgtggtggtggctgtggaggtggttgtggaaacatactgaagagtggtggctgtggtggctgtggcggcggctgtgggaacatactgaagagtggtggctgcggtgggtgtggtggtagcggtggttgtggtagtgggtgcggaggcttattcaagggtaatggttatcatgaaaatacatctggtaactcatgtgccgaagaccacccaaaggcagtagttgtttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009787 GO:0009966 GO:0009987 GO:0010646 GO:0010928 GO:0016020 GO:0023051 GO:0033554 GO:0044464 GO:0048580 GO:0048583 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051716 GO:0065007 GO:0071214 GO:0071470 GO:0071944 GO:0104004 GO:1901419 GO:1905957 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRDP-like

Protein Analysis

856

Amino Acids

93.19

Weight (kDa)

7.6

Isoelectric Point (pI)

42.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002521)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22660 AT2G22660 AT2G22660 AT4G37900 AT4G37900
fragaria_vesca	FvH4_1g18970 FvH4_1g18970 FvH4_1g18970 FvH4_5g33890 FvH4_5g33890 FvH4_5g33890
malus_domestica	MD01G1044900.v1.1 MD08G1208800.v1.1 MD08G1209100.v1.1
prunus_persica	Prupe.1G539900_v2.0.a1 Prupe.6G209600_v2.0.a1
pyrus_communis	pycom08g18020
rosa_chinensis	RchiOBHm_Chr2g0109991 RchiOBHm_Chr7g0233251 RchiOBHm_Chr7g0233261
rosa_laevigata	RLG00000001282 RLG00000017776
rosa_multiflora	Rmu_co8210630.1_g000001 Rmu_sc0004650.1_g000001 Rmu_sc0008314.1_g000009 Rmu_sc0035251.1_g000001 Rmu_sc0035252.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133800
rosa_rugosa	Rorug02G0165000 Rorug07G0279600
rosa_samantha	Rh2AG216500 Rh2BG226400 Rh2CG218700 Rh2DG222100 Rh7AG435600 Rh7AG435700 Rh7BG408000 Rh7CG454700 Rh7CG454800 Rh7DG423900
rosa_wichuraiana	Rw2G016730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1274, 1648
AatII	GACGTC	1 cut(s)	2129
Acc65I	GGTACC	1 cut(s)	845
AccB1I	GGYRCC	3 cut(s)	845, 1318, 2054
AccB7I	CCANNNNNTGG	3 cut(s)	828, 855, 1485
AccI	GTMKAC	1 cut(s)	69
AccII	CGCG	1 cut(s)	1683
AclWI	GGATC	1 cut(s)	1841
AcsI	RAATTY	5 cut(s)	390, 1631, 1690, 1736, 1832
AcuI	CTGAAG	6 cut(s)	83, 405, 1815, 1863, 2402, 2450
AcyI	GRCGYC	1 cut(s)	2126
AdeI	CACNNNGTG	1 cut(s)	1819
AfaI	GTAC	5 cut(s)	137, 173, 243, 847, 1621
AfeI	AGCGCT	1 cut(s)	2254
AfiI	CCNNNNNNNGG	8 cut(s)	828, 855, 1460, 1461, 1485, 1608, 2045, 2554
AjnI	CCWGG	5 cut(s)	216, 540, 848, 1744, 1924
AjuI	GAANNNNNNNTTGG	2 cut(s)	825, 857
AloI	GAACNNNNNNTCC	4 cut(s)	791, 823, 1557, 1589
Alw21I	GWGCWC	1 cut(s)	2069
Alw26I	GTCTC	2 cut(s)	645, 2133
AlwI	GGATC	1 cut(s)	1841
AlwNI	CAGNNNCTG	1 cut(s)	1925
Aor51HI	AGCGCT	1 cut(s)	2254
AoxI	GGCC	1 cut(s)	143
ApeKI	GCWGC	7 cut(s)	80, 83, 94, 110, 587, 1177, 2442
ApoI	RAATTY	5 cut(s)	390, 1631, 1690, 1736, 1832
Asp718I	GGTACC	1 cut(s)	845
AspLEI	GCGC	3 cut(s)	49, 2198, 2255
AspS9I	GGNCC	5 cut(s)	39, 143, 230, 1519, 1671
AsuHPI	GGTGA	4 cut(s)	686, 997, 1194, 2305
AvaII	GGWCC	4 cut(s)	39, 230, 1519, 1671
AxyI	CCTNAGG	1 cut(s)	2040
BanI	GGYRCC	3 cut(s)	845, 1318, 2054
BanII	GRGCYC	2 cut(s)	889, 2069
BarI	GAAGNNNNNNTAC	2 cut(s)	960, 992
BbsI	GAAGAC	1 cut(s)	2550
Bbv12I	GWGCWC	1 cut(s)	2069
BbvI	GCAGC	7 cut(s)	67, 95, 97, 106, 574, 1164, 2429
BccI	CCATC	5 cut(s)	7, 898, 1309, 1723, 1999
BcgI	CGANNNNNNTGC	2 cut(s)	636, 670
BciT130I	CCWGG	5 cut(s)	218, 542, 850, 1746, 1926
BciVI	GTATCC	5 cut(s)	417, 721, 793, 1534, 1694
BclI	TGATCA	1 cut(s)	955
BcoDI	GTCTC	2 cut(s)	645, 2133
BfaI	CTAG	3 cut(s)	594, 930, 1274
BfmI	CTRYAG	2 cut(s)	81, 166
BfoI	RGCGCY	2 cut(s)	2199, 2256
BfuI	GTATCC	5 cut(s)	417, 721, 793, 1534, 1694
BlpI	GCTNAGC	1 cut(s)	1101
Bme1390I	CCNGG	5 cut(s)	218, 542, 850, 1746, 1926
Bme18I	GGWCC	4 cut(s)	39, 230, 1519, 1671
BmgT120I	GGNCC	5 cut(s)	39, 143, 230, 1519, 1671
BmiI	GGNNCC	6 cut(s)	231, 847, 888, 1320, 1673, 2056
BmrFI	CCNGG	5 cut(s)	218, 542, 850, 1746, 1926
BmrI	ACTGGG	1 cut(s)	813
BmsI	GCATC	4 cut(s)	712, 1465, 1902, 2219
BmuI	ACTGGG	1 cut(s)	813
BpiI	GAAGAC	1 cut(s)	2550
BpmI	CTGGAG	2 cut(s)	1191, 2094
Bpu1102I	GCTNAGC	1 cut(s)	1101
BpuEI	CTTGAG	2 cut(s)	53, 2083
BsaBI	GATNNNNATC	2 cut(s)	123, 675
BsaHI	GRCGYC	1 cut(s)	2126
BsaJI	CCNNGG	6 cut(s)	216, 450, 1577, 1695, 1744, 1925
BsaWI	WCCGGW	1 cut(s)	286
BsaXI	ACNNNNNCTCC	6 cut(s)	20, 50, 892, 922, 2067, 2097
Bsc4I	CCNNNNNNNGG	8 cut(s)	828, 855, 1460, 1461, 1485, 1608, 2045, 2554
Bse118I	RCCGGY	2 cut(s)	145, 2192
Bse1I	ACTGG	6 cut(s)	808, 1156, 1174, 1513, 1648, 1673
Bse21I	CCTNAGG	1 cut(s)	2040
Bse3DI	GCAATG	3 cut(s)	833, 876, 1868
Bse8I	GATNNNNATC	2 cut(s)	123, 675
BseBI	CCWGG	5 cut(s)	218, 542, 850, 1746, 1926
BseDI	CCNNGG	6 cut(s)	216, 450, 1577, 1695, 1744, 1925
BseGI	GGATG	6 cut(s)	703, 943, 2210, 2234, 2273, 2285
BseJI	GATNNNNATC	2 cut(s)	123, 675
BseLI	CCNNNNNNNGG	8 cut(s)	828, 855, 1460, 1461, 1485, 1608, 2045, 2554
BseMI	GCAATG	3 cut(s)	833, 876, 1868
BseMII	CTCAG	5 cut(s)	216, 1116, 1126, 2031, 2091
BseNI	ACTGG	6 cut(s)	808, 1156, 1174, 1513, 1648, 1673
BseRI	GAGGAG	1 cut(s)	885
BseXI	GCAGC	7 cut(s)	67, 95, 97, 106, 574, 1164, 2429
BseYI	CCCAGC	1 cut(s)	1460
Bsh1236I	CGCG	1 cut(s)	1683
Bsh1285I	CGRYCG	1 cut(s)	1427
BshFI	GGCC	1 cut(s)	145
BshNI	GGYRCC	3 cut(s)	845, 1318, 2054
BsiEI	CGRYCG	1 cut(s)	1427
BsiHKAI	GWGCWC	1 cut(s)	2069
BsiSI	CCGG	3 cut(s)	146, 287, 2193
BslFI	GGGAC	5 cut(s)	243, 1180, 1262, 1654, 1657
BslI	CCNNNNNNNGG	8 cut(s)	828, 855, 1460, 1461, 1485, 1608, 2045, 2554
BsmAI	GTCTC	2 cut(s)	645, 2133
BsmBI	CGTCTC	1 cut(s)	2133
BsmFI	GGGAC	5 cut(s)	243, 1180, 1262, 1654, 1657
BsnI	GGCC	1 cut(s)	145
Bsp1286I	GDGCHC	2 cut(s)	889, 2069
Bsp143I	GATC	5 cut(s)	499, 568, 676, 955, 1846
Bsp1720I	GCTNAGC	1 cut(s)	1101
Bsp68I	TCGCGA	1 cut(s)	1683
BspANI	GGCC	1 cut(s)	145
BspCNI	CTCAG	5 cut(s)	217, 1117, 1125, 2032, 2092
BspFNI	CGCG	1 cut(s)	1683
BspHI	TCATGA	1 cut(s)	2512
BspLI	GGNNCC	6 cut(s)	231, 847, 888, 1320, 1673, 2056
BspMAI	CTGCAG	1 cut(s)	85
BspPI	GGATC	1 cut(s)	1841
BspQI	GCTCTTC	1 cut(s)	2074
BspT107I	GGYRCC	3 cut(s)	845, 1318, 2054
BsrDI	GCAATG	3 cut(s)	833, 876, 1868
BsrFI	RCCGGY	2 cut(s)	145, 2192
BsrI	ACTGG	6 cut(s)	808, 1156, 1174, 1513, 1648, 1673
BssAI	RCCGGY	2 cut(s)	145, 2192
BssECI	CCNNGG	6 cut(s)	216, 450, 1577, 1695, 1744, 1925
BssMI	GATC	5 cut(s)	499, 568, 676, 955, 1846
BssNI	GRCGYC	1 cut(s)	2126
BssT1I	CCWWGG	1 cut(s)	1577
Bst2UI	CCWGG	5 cut(s)	218, 542, 850, 1746, 1926
Bst4CI	ACNGT	5 cut(s)	308, 1271, 1428, 1921, 1950
Bst6I	CTCTTC	7 cut(s)	828, 1266, 2074, 2240, 2291, 2378, 2426
BstACI	GRCGYC	1 cut(s)	2126
BstAPI	GCANNNNNTGC	1 cut(s)	736
BstC8I	GCNNGC	5 cut(s)	147, 198, 1529, 2194, 2257
BstDEI	CTNAG	7 cut(s)	225, 1101, 1112, 1125, 1825, 2040, 2100
BstENI	CCTNNNNNAGG	1 cut(s)	2043
BstF5I	GGATG	6 cut(s)	703, 943, 2210, 2234, 2273, 2285
BstFNI	CGCG	1 cut(s)	1683
BstH2I	RGCGCY	2 cut(s)	2199, 2256
BstHHI	GCGC	3 cut(s)	49, 2198, 2255
BstKTI	GATC	5 cut(s)	502, 571, 679, 958, 1849
BstMAI	GTCTC	2 cut(s)	645, 2133
BstMBI	GATC	5 cut(s)	499, 568, 676, 955, 1846
BstMCI	CGRYCG	1 cut(s)	1427
BstMWI	GCNNNNNNNGC	5 cut(s)	193, 736, 2259, 2400, 2409
BstNI	CCWGG	5 cut(s)	218, 542, 850, 1746, 1926
BstNSI	RCATGY	3 cut(s)	951, 1360, 2160
BstSCI	CCNGG	5 cut(s)	216, 540, 848, 1744, 1924
BstSFI	CTRYAG	2 cut(s)	81, 166
BstUI	CGCG	1 cut(s)	1683
BstV1I	GCAGC	7 cut(s)	67, 95, 97, 106, 574, 1164, 2429
BstV2I	GAAGAC	1 cut(s)	2550
BstX2I	RGATCY	1 cut(s)	1846
BstYI	RGATCY	1 cut(s)	1846
Bsu36I	CCTNAGG	1 cut(s)	2040
BsuI	GTATCC	5 cut(s)	417, 721, 793, 1534, 1694
BsuRI	GGCC	1 cut(s)	145
BtgZI	GCGATG	1 cut(s)	1664
BtsCI	GGATG	6 cut(s)	703, 943, 2210, 2234, 2273, 2285
BtsI	GCAGTG	3 cut(s)	1869, 2170, 2269
BtsIMutI	CAGTG	5 cut(s)	1163, 1666, 1869, 2170, 2269
BtuMI	TCGCGA	1 cut(s)	1683
Cac8I	GCNNGC	5 cut(s)	147, 198, 1529, 2194, 2257
CaiI	CAGNNNCTG	1 cut(s)	1925
CciI	TCATGA	1 cut(s)	2512
CfoI	GCGC	3 cut(s)	49, 2198, 2255
Cfr10I	RCCGGY	2 cut(s)	145, 2192
Cfr13I	GGNCC	5 cut(s)	39, 143, 230, 1519, 1671
CseI	GACGC	1 cut(s)	579
CsiI	ACCWGGT	2 cut(s)	540, 848
Csp6I	GTAC	5 cut(s)	136, 172, 242, 846, 1620
CviQI	GTAC	5 cut(s)	136, 172, 242, 846, 1620
DdeI	CTNAG	7 cut(s)	225, 1101, 1112, 1125, 1825, 2040, 2100
DpnI	GATC	5 cut(s)	501, 570, 678, 957, 1848
DpnII	GATC	5 cut(s)	499, 568, 676, 955, 1846
DraIII	CACNNNGTG	1 cut(s)	1819
DrdI	GACNNNNNNGTC	2 cut(s)	1274, 1648
DseDI	GACNNNNNNGTC	2 cut(s)	1274, 1648
Eam1104I	CTCTTC	7 cut(s)	828, 1266, 2074, 2240, 2291, 2378, 2426
EarI	CTCTTC	7 cut(s)	828, 1266, 2074, 2240, 2291, 2378, 2426
EciI	GGCGGA	1 cut(s)	1514
Ecl136II	GAGCTC	1 cut(s)	2067
Eco130I	CCWWGG	1 cut(s)	1577
Eco24I	GRGCYC	2 cut(s)	889, 2069
Eco47I	GGWCC	4 cut(s)	39, 230, 1519, 1671
Eco47III	AGCGCT	1 cut(s)	2254
Eco53kI	GAGCTC	1 cut(s)	2067
Eco57I	CTGAAG	6 cut(s)	83, 405, 1815, 1863, 2402, 2450
Eco81I	CCTNAGG	1 cut(s)	2040
EcoICRI	GAGCTC	1 cut(s)	2067
EcoNI	CCTNNNNNAGG	1 cut(s)	2043
EcoO109I	RGGNCCY	2 cut(s)	230, 1519
EcoRI	GAATTC	1 cut(s)	1832
EcoRII	CCWGG	5 cut(s)	216, 540, 848, 1744, 1924
EcoT14I	CCWWGG	1 cut(s)	1577
EcoT38I	GRGCYC	2 cut(s)	889, 2069
ErhI	CCWWGG	1 cut(s)	1577
Esp3I	CGTCTC	1 cut(s)	2133
FalI	AAGNNNNNCTT	2 cut(s)	594, 626
FaqI	GGGAC	5 cut(s)	243, 1180, 1262, 1654, 1657
FauNDI	CATATG	2 cut(s)	558, 667
FbaI	TGATCA	1 cut(s)	955
FblI	GTMKAC	1 cut(s)	69
FokI	GGATG	6 cut(s)	690, 950, 2217, 2241, 2280, 2292
FriOI	GRGCYC	2 cut(s)	889, 2069
FspBI	CTAG	3 cut(s)	594, 930, 1274
GlaI	GCGC	3 cut(s)	48, 2197, 2254
GsaI	CCCAGC	1 cut(s)	1464
GsuI	CTGGAG	2 cut(s)	1191, 2094
HaeII	RGCGCY	2 cut(s)	2199, 2256
HaeIII	GGCC	1 cut(s)	145
HapII	CCGG	3 cut(s)	146, 287, 2193
HgaI	GACGC	1 cut(s)	579
HhaI	GCGC	3 cut(s)	49, 2198, 2255
Hin1I	GRCGYC	1 cut(s)	2126
Hin6I	GCGC	3 cut(s)	47, 2196, 2253
HinP1I	GCGC	3 cut(s)	47, 2196, 2253
HincII	GTYRAC	2 cut(s)	1993, 2089
HindII	GTYRAC	2 cut(s)	1993, 2089
HpaI	GTTAAC	2 cut(s)	1993, 2089
HpaII	CCGG	3 cut(s)	146, 287, 2193
HphI	GGTGA	4 cut(s)	686, 997, 1194, 2305
Hpy166II	GTNNAC	5 cut(s)	39, 70, 1163, 1993, 2089
Hpy8I	GTNNAC	5 cut(s)	39, 70, 1163, 1993, 2089
Hpy99I	CGWCG	1 cut(s)	651
HpyAV	CCTTC	8 cut(s)	13, 134, 356, 1031, 1685, 1960, 2039, 2105
HpyCH4III	ACNGT	5 cut(s)	308, 1271, 1428, 1921, 1950
HpyCH4IV	ACGT	2 cut(s)	649, 2126
HpyF10VI	GCNNNNNNNGC	5 cut(s)	193, 736, 2259, 2400, 2409
HpyF3I	CTNAG	7 cut(s)	225, 1101, 1112, 1125, 1825, 2040, 2100
HpySE526I	ACGT	2 cut(s)	649, 2126
Hsp92I	GRCGYC	1 cut(s)	2126
HspAI	GCGC	3 cut(s)	47, 2196, 2253
KpnI	GGTACC	1 cut(s)	849
KroI	GCCGGC	2 cut(s)	145, 2192
KroNI	GCCGGC	2 cut(s)	147, 2194
Ksp22I	TGATCA	1 cut(s)	955
KspAI	GTTAAC	2 cut(s)	1993, 2089
Kzo9I	GATC	5 cut(s)	499, 568, 676, 955, 1846
LguI	GCTCTTC	1 cut(s)	2074
LmnI	GCTCC	5 cut(s)	28, 754, 892, 2075, 2153
Lsp1109I	GCAGC	7 cut(s)	67, 95, 97, 106, 574, 1164, 2429
LweI	GCATC	4 cut(s)	712, 1465, 1902, 2219
MabI	ACCWGGT	2 cut(s)	540, 848
MaeI	CTAG	3 cut(s)	594, 930, 1274
MaeII	ACGT	2 cut(s)	649, 2126
MaeIII	GTNAC	5 cut(s)	272, 814, 1819, 2122, 2528
MalI	GATC	5 cut(s)	501, 570, 678, 957, 1848
MboI	GATC	5 cut(s)	499, 568, 676, 955, 1846
MfeI	CAATTG	1 cut(s)	698
MflI	RGATCY	1 cut(s)	1846
MhlI	GDGCHC	2 cut(s)	889, 2069
MlyI	GAGTC	2 cut(s)	206, 1104
MmeI	TCCRAC	4 cut(s)	686, 1409, 1573, 1932
MroNI	GCCGGC	2 cut(s)	145, 2192
MseI	TTAA	9 cut(s)	153, 516, 617, 1343, 1992, 2028, 2088, 2094, 2569
MspA1I	CMGCKG	1 cut(s)	512
MspI	CCGG	3 cut(s)	146, 287, 2193
MspR9I	CCNGG	5 cut(s)	218, 542, 850, 1746, 1926
MunI	CAATTG	1 cut(s)	698
MvaI	CCWGG	5 cut(s)	218, 542, 850, 1746, 1926
MvnI	CGCG	1 cut(s)	1683
MwoI	GCNNNNNNNGC	5 cut(s)	193, 736, 2259, 2400, 2409
NaeI	GCCGGC	2 cut(s)	147, 2194
NdeI	CATATG	2 cut(s)	558, 667
NdeII	GATC	5 cut(s)	499, 568, 676, 955, 1846
NgoMIV	GCCGGC	2 cut(s)	145, 2192
NlaIV	GGNNCC	6 cut(s)	231, 847, 888, 1320, 1673, 2056
NmuCI	GTSAC	3 cut(s)	272, 1819, 2122
NruI	TCGCGA	1 cut(s)	1683
NspI	RCATGY	3 cut(s)	951, 1360, 2160
PagI	TCATGA	1 cut(s)	2512
PciSI	GCTCTTC	1 cut(s)	2074
PdiI	GCCGGC	2 cut(s)	147, 2194
PfeI	GAWTC	8 cut(s)	124, 328, 770, 1362, 1468, 1566, 1661, 1910
PflFI	GACNNNGTC	1 cut(s)	74
PflMI	CCANNNNNTGG	3 cut(s)	828, 855, 1485
PleI	GAGTC	2 cut(s)	206, 1104
PpsI	GAGTC	2 cut(s)	206, 1104
PpuMI	RGGWCCY	2 cut(s)	230, 1519
Psp124BI	GAGCTC	1 cut(s)	2069
Psp5II	RGGWCCY	2 cut(s)	230, 1519
Psp6I	CCWGG	5 cut(s)	216, 540, 848, 1744, 1924
PspFI	CCCAGC	1 cut(s)	1460
PspGI	CCWGG	5 cut(s)	216, 540, 848, 1744, 1924
PspN4I	GGNNCC	6 cut(s)	231, 847, 888, 1320, 1673, 2056
PspPI	GGNCC	5 cut(s)	39, 143, 230, 1519, 1671
PspPPI	RGGWCCY	2 cut(s)	230, 1519
PstI	CTGCAG	1 cut(s)	85
PstNI	CAGNNNCTG	1 cut(s)	1925
PsuI	RGATCY	1 cut(s)	1846
PsyI	GACNNNGTC	1 cut(s)	74
PvuII	CAGCTG	1 cut(s)	512
RruI	TCGCGA	1 cut(s)	1683
RsaI	GTAC	5 cut(s)	137, 173, 243, 847, 1621
RsaNI	GTAC	5 cut(s)	136, 172, 242, 846, 1620
SacI	GAGCTC	1 cut(s)	2069
SapI	GCTCTTC	1 cut(s)	2074
SaqAI	TTAA	9 cut(s)	153, 516, 617, 1343, 1992, 2028, 2088, 2094, 2569
Sau3AI	GATC	5 cut(s)	499, 568, 676, 955, 1846
Sau96I	GGNCC	5 cut(s)	39, 143, 230, 1519, 1671
SchI	GAGTC	2 cut(s)	206, 1104
ScrFI	CCNGG	5 cut(s)	218, 542, 850, 1746, 1926
SduI	GDGCHC	2 cut(s)	889, 2069
SexAI	ACCWGGT	2 cut(s)	540, 848
SfaNI	GCATC	4 cut(s)	712, 1465, 1902, 2219
SfcI	CTRYAG	2 cut(s)	81, 166
SinI	GGWCC	4 cut(s)	39, 230, 1519, 1671
SmlI	CTYRAG	2 cut(s)	32, 2062
SmoI	CTYRAG	2 cut(s)	32, 2062
SspMI	CTAG	3 cut(s)	594, 930, 1274
SstI	GAGCTC	1 cut(s)	2069
StyD4I	CCNGG	5 cut(s)	216, 540, 848, 1744, 1924
StyI	CCWWGG	1 cut(s)	1577
TaaI	ACNGT	5 cut(s)	308, 1271, 1428, 1921, 1950
TaiI	ACGT	2 cut(s)	652, 2129
TaqI	TCGA	4 cut(s)	292, 341, 1423, 2016
TatI	WGTACW	1 cut(s)	1619
TauI	GCSGC	5 cut(s)	1108, 2262, 2307, 2412, 2415
TfiI	GAWTC	8 cut(s)	124, 328, 770, 1362, 1468, 1566, 1661, 1910
Tru1I	TTAA	9 cut(s)	153, 516, 617, 1343, 1992, 2028, 2088, 2094, 2569
Tru9I	TTAA	9 cut(s)	153, 516, 617, 1343, 1992, 2028, 2088, 2094, 2569
TscAI	CASTG	5 cut(s)	1163, 1673, 1869, 2170, 2269
TseFI	GTSAC	3 cut(s)	272, 1819, 2122
TseI	GCWGC	7 cut(s)	80, 83, 94, 110, 587, 1177, 2442
Tsp45I	GTSAC	3 cut(s)	272, 1819, 2122
TspDTI	ATGAA	9 cut(s)	575, 602, 747, 1235, 1397, 1518, 1667, 1779, 2529
TspGWI	ACGGA	2 cut(s)	180, 481
TspRI	CASTG	5 cut(s)	1163, 1673, 1869, 2170, 2269
Tth111I	GACNNNGTC	1 cut(s)	74
Van91I	CCANNNNNTGG	3 cut(s)	828, 855, 1485
VpaK11BI	GGWCC	4 cut(s)	39, 230, 1519, 1671
XagI	CCTNNNNNAGG	1 cut(s)	2043
XapI	RAATTY	5 cut(s)	390, 1631, 1690, 1736, 1832
XbaI	TCTAGA	1 cut(s)	593
XceI	RCATGY	3 cut(s)	951, 1360, 2160
XcmI	CCANNNNNNNNNTGG	1 cut(s)	499
XmiI	GTMKAC	1 cut(s)	69
XspI	CTAG	3 cut(s)	594, 930, 1274
ZraI	GACGTC	1 cut(s)	2127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.