Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0002521

Physical Location & Seq

Genomic Coordinates Reverse (-)

20183739 .. 20188023

Gene Structure 4285 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G016730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2457 bp

ATGGAGAAGGAACAGGAGCTTGAGTGGACCAAAGCGCAGAGCATTGGAATAAGCGTAGACCTTGTGGCTGCAGCAAAAAAGCAGCTTCAGTTTCTTGCTGCTGTTGATAGGAATCGGTATCTGTACGAAGGGCCAGCTCTTAACAGGGCTATCTATAGGTACAACGCTTGTTGGCTTCCGTTGCTTGCCAAACATTCAGACTCCCAGGTTTCTGAGGGACCTTTGGTTGTACCTCTTGATTGTGAATGGATTTGGCATTGTCACAGGCTGAATCCGGTTCGATACAAGACTGACTGTGAAGAACTTTATGGAAAGATTCTTGACAACTCGAATGTTGTTTCCTCTGTTGAAGGCTCTTGTAAAAGTAAAACTGAAGAAATTTGGAATAGTCTGTATCCAGCAGAACCCTACAACTTCAACTTACAAAAGGCATTGTCCGAGGATATATCTGAAAGGATTTCCAAACTTGACAAATGCACCAAATATGATCTGGTTTCAGCTGTTAAAAGACAATCTCCTTTCTTTTACCAGGTATCTCCACCCCATATGAACCATGATCTGTTTCTTGAAGGAGCTGCGTCTAGATATAAAGGGTTTCTTCATTTAATCAAGAGCAATAATGAGAAGTCTCTACGACGTTTCTGCGTTCCGACATATGATATTGATCTTATCTGGCATACTCACCAATTGCATCCTGTATCCTATTGTAAAGATCTGCATGAACTGCTTGGAAAGGTATTGGAGCATGACGACATGGATTCGGACAGAACTAAAGGGAAGAAGCTGGATACTGGGTTCTCTGTAACCACCAAGCAATGGGAAGAGGCATTTGGTACCAGGTATTGGAGAGCAGGGGCAATGTATAGAGGCAGGGCTCCATCTCCTCTCACAACCACTCCTTATCAGTCTAACATCCCTAGCAAGGATGTAATTGCATGTCCTGATCATCAGAAAGTAATTGAGCTTCCAGAGGTGAAAGCTGTGGAGGTCCTTTTGGAGTTTCTGGAAGTTAGGAACTTACCAGAAGGACACAAAGGGCTTCTCTTTGCCTCATTCAGTAAGACTACAAAGGATATATTTTTCAATGCTAAGCGGCGACTCAGCATTTTTTCTGAGTTTGGAGAGAAACAGGTTGCTTCTTTCCAGTGTGAACCTACTGGAGAGCTGCTTTTTGAACTCATGTCCCATTCACCTTTATATATACCAATGAAAAGGGCATATAAAACATTAGGTTCTGCTTCGTTCTCTCTTCAAGACTGTCTAGTCCCACCCTCTAAATTATATGCAGAAAAATGGTTAGAGATGGTGCCAAGCTCTAAAGTTGGGAACTTAAAACCAATCTACATGCGGTTTGCTATGTCTTTTACCATTCCAACCATAGCACAACACACACTTCATGTGGTTCGTTCTCGACCGTTTTCAAAAAGTTCTTGCTTTTTCCCCTTTTCTGGGAAGAATCAAGATGCCAAGAATTGGACACAAGTGATTGATGAAACTGGAACAGAGGTCCTCCGCCTGCAAATGAGGGATACTGAAAAGGAAAAGGTAAAGGGAATCAGCGTTCCAAGGAAAGAGGTGGTTGGAATTACCAAGTCTGGGAAAATATGTACTCTTGCTGAATTTGTGGGGACTGGCAGAAAGCTGGATTATGAACATAAGCATTATGAGGAAAATACAACTGAAGATAAAACTGAACAACACTTCGTGACCTTAGTTGAATTCTCTGCTGAAGATCCTTATGGCAAAGCAGTGGCATTGCTTGACCTAAAATCTGGGTGCATCAAGGTAAAGGAAGAATCAATTACAGTTCCTGGGGTCATAATATCTTTTATACTGTCGGATAAGCTAAAGAAGGAAAGATATGACGGGTTTGCTGTTAACCCTGCGGAGATGGGTATTGTCGAGGAAGAAATTAAAGAGAACCCTGAGGAAGGCAAAGGCACCAACTTGAGCTCTTCTGGAGCAAGTGTAGTTAACCTTAAATCTGAGGTGGTTGAAGGAAATGTAGTGACGTCTCAAAAAGGTGGAGGCTGTGGTGGAGCATGTGGCAGTGGGTGTGGAAATGCAACAAGGAGTGCCGGCGCTGGTGGATGTGGAAGTGGTTGTGGTGGAGGATGTGGAAACATGGAGAAGAGTAGCGCTTGCGGCAGTGGATGTGGTGGAGGATGTGGAAACTTGGTGAAGAGTGGCGGCTGTGGTGGTGGCTGTGGAGGTGGCTGTGGTGGTGCCTGTGGTGGTGGCTGTGGAGGTGGTTGTGGAAACATACTGAAGAGTGGTGGCTGTGGTGGCTGTGGCGGCGGCTGTGGGAACATACTGAAGAGTGGTGGCTGCGGTGGGTGTGGTGGTAGCGGTGGTTGTGGTAGTGGGTGCGGAGGCTTATTCAAGGGTAATGGTTATCATGAAAATACATCTGGTAACTCATGTGCCGAAGACCACCCAAAGGCAGTAGTTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009787 GO:0009966 GO:0009987 GO:0010646 GO:0010928 GO:0016020 GO:0023051 GO:0033554 GO:0044464 GO:0048580 GO:0048583 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051716 GO:0065007 GO:0071214 GO:0071470 GO:0071944 GO:0104004 GO:1901419 GO:1905957 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRDP-like

Protein Analysis

818

Amino Acids

88.59

Weight (kDa)

7.4

Isoelectric Point (pI)

43.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRDP-like	PF07173	11 - 98	4.6e-09	Glycine-rich domain-containing protein-like
GRDP-like	PF07173	94 - 238	4.8e-58	Glycine-rich domain-containing protein-like
C2_GRDP	PF25334	325 - 457	4.4e-54	C2 domain of glycine-rich domain-containing protein
GRDP_C	PF25335	544 - 596	1.7e-17	Glycine Rich Domain Protein C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002521)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22660 AT2G22660 AT2G22660 AT4G37900 AT4G37900
fragaria_vesca	FvH4_1g18970 FvH4_1g18970 FvH4_1g18970 FvH4_5g33890 FvH4_5g33890 FvH4_5g33890
malus_domestica	MD01G1044900.v1.1 MD08G1208800.v1.1 MD08G1209100.v1.1
prunus_persica	Prupe.1G539900_v2.0.a1 Prupe.6G209600_v2.0.a1
pyrus_communis	pycom08g18020
rosa_chinensis	RchiOBHm_Chr2g0109991 RchiOBHm_Chr7g0233251 RchiOBHm_Chr7g0233261
rosa_laevigata	RLG00000001282 RLG00000017776
rosa_multiflora	Rmu_co8210630.1_g000001 Rmu_sc0004650.1_g000001 Rmu_sc0008314.1_g000009 Rmu_sc0035251.1_g000001 Rmu_sc0035252.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133800
rosa_rugosa	Rorug02G0165000 Rorug07G0279600
rosa_samantha	Rh2AG216500 Rh2BG226400 Rh2CG218700 Rh2DG222100 Rh7AG435600 Rh7AG435700 Rh7BG408000 Rh7CG454700 Rh7CG454800 Rh7DG423900
rosa_wichuraiana	Rw2G016730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1262
AatII	GACGTC	1 cut(s)	2015
Acc65I	GGTACC	1 cut(s)	833
AccB1I	GGYRCC	4 cut(s)	833, 1306, 1940, 2225
AccB7I	CCANNNNNTGG	3 cut(s)	816, 843, 1473
AccI	GTMKAC	1 cut(s)	57
AclWI	GGATC	1 cut(s)	1727
AcsI	RAATTY	3 cut(s)	378, 1619, 1718
AcuI	CTGAAG	6 cut(s)	71, 393, 1701, 1749, 2288, 2336
AcyI	GRCGYC	1 cut(s)	2012
AdeI	CACNNNGTG	1 cut(s)	1705
AfaI	GTAC	5 cut(s)	125, 161, 231, 835, 1609
AfeI	AGCGCT	1 cut(s)	2140
AfiI	CCNNNNNNNGG	9 cut(s)	816, 843, 922, 1448, 1449, 1473, 1596, 1931, 2440
AjnI	CCWGG	4 cut(s)	204, 528, 836, 1810
AjuI	GAANNNNNNNTTGG	2 cut(s)	813, 845
AloI	GAACNNNNNNTCC	4 cut(s)	779, 811, 1545, 1577
Alw21I	GWGCWC	1 cut(s)	1955
Alw26I	GTCTC	2 cut(s)	633, 2019
AlwI	GGATC	1 cut(s)	1727
AlwNI	CAGNNNCTG	1 cut(s)	1811
Aor51HI	AGCGCT	1 cut(s)	2140
AoxI	GGCC	1 cut(s)	131
ApeKI	GCWGC	7 cut(s)	68, 71, 82, 98, 575, 1165, 2328
ApoI	RAATTY	3 cut(s)	378, 1619, 1718
Asp718I	GGTACC	1 cut(s)	833
AspLEI	GCGC	3 cut(s)	37, 2084, 2141
AspS9I	GGNCC	5 cut(s)	27, 131, 218, 988, 1507
AsuHPI	GGTGA	4 cut(s)	674, 985, 1182, 2191
AvaII	GGWCC	4 cut(s)	27, 218, 988, 1507
AxyI	CCTNAGG	1 cut(s)	1926
BanI	GGYRCC	4 cut(s)	833, 1306, 1940, 2225
BanII	GRGCYC	2 cut(s)	877, 1955
BarI	GAAGNNNNNNTAC	2 cut(s)	948, 980
BbsI	GAAGAC	1 cut(s)	2436
Bbv12I	GWGCWC	1 cut(s)	1955
BbvI	GCAGC	7 cut(s)	55, 83, 85, 94, 562, 1152, 2315
BccI	CCATC	3 cut(s)	886, 1297, 1885
BcgI	CGANNNNNNTGC	2 cut(s)	624, 658
BciT130I	CCWGG	4 cut(s)	206, 530, 838, 1812
BciVI	GTATCC	4 cut(s)	405, 709, 781, 1522
BclI	TGATCA	1 cut(s)	943
BcoDI	GTCTC	2 cut(s)	633, 2019
BfaI	CTAG	3 cut(s)	582, 918, 1262
BfmI	CTRYAG	2 cut(s)	69, 154
BfoI	RGCGCY	2 cut(s)	2085, 2142
BfuI	GTATCC	4 cut(s)	405, 709, 781, 1522
BglII	AGATCT	1 cut(s)	712
BlpI	GCTNAGC	1 cut(s)	1089
Bme1390I	CCNGG	4 cut(s)	206, 530, 838, 1812
Bme18I	GGWCC	4 cut(s)	27, 218, 988, 1507
BmgT120I	GGNCC	5 cut(s)	27, 131, 218, 988, 1507
BmiI	GGNNCC	6 cut(s)	219, 835, 876, 1308, 1942, 2227
BmrFI	CCNGG	4 cut(s)	206, 530, 838, 1812
BmrI	ACTGGG	1 cut(s)	801
BmsI	GCATC	3 cut(s)	700, 1453, 1788
BmuI	ACTGGG	1 cut(s)	801
BpiI	GAAGAC	1 cut(s)	2436
BpmI	CTGGAG	2 cut(s)	1179, 1980
Bpu1102I	GCTNAGC	1 cut(s)	1089
BpuEI	CTTGAG	2 cut(s)	41, 1969
BsaBI	GATNNNNATC	2 cut(s)	111, 663
BsaHI	GRCGYC	1 cut(s)	2012
BsaJI	CCNNGG	4 cut(s)	204, 438, 1565, 1811
BsaWI	WCCGGW	1 cut(s)	274
BsaXI	ACNNNNNCTCC	6 cut(s)	8, 38, 880, 910, 1953, 1983
Bsc4I	CCNNNNNNNGG	9 cut(s)	816, 843, 922, 1448, 1449, 1473, 1596, 1931, 2440
Bse118I	RCCGGY	1 cut(s)	2078
Bse1I	ACTGG	5 cut(s)	796, 1144, 1162, 1501, 1636
Bse21I	CCTNAGG	1 cut(s)	1926
Bse3DI	GCAATG	3 cut(s)	821, 864, 1754
Bse8I	GATNNNNATC	2 cut(s)	111, 663
BseBI	CCWGG	4 cut(s)	206, 530, 838, 1812
BseDI	CCNNGG	4 cut(s)	204, 438, 1565, 1811
BseGI	GGATG	7 cut(s)	691, 912, 931, 2096, 2120, 2159, 2171
BseJI	GATNNNNATC	2 cut(s)	111, 663
BseLI	CCNNNNNNNGG	9 cut(s)	816, 843, 922, 1448, 1449, 1473, 1596, 1931, 2440
BseMI	GCAATG	3 cut(s)	821, 864, 1754
BseMII	CTCAG	5 cut(s)	204, 1104, 1114, 1917, 1977
BseNI	ACTGG	5 cut(s)	796, 1144, 1162, 1501, 1636
BseRI	GAGGAG	1 cut(s)	873
BseXI	GCAGC	7 cut(s)	55, 83, 85, 94, 562, 1152, 2315
Bsh1285I	CGRYCG	1 cut(s)	1415
BshFI	GGCC	1 cut(s)	133
BshNI	GGYRCC	4 cut(s)	833, 1306, 1940, 2225
BsiEI	CGRYCG	1 cut(s)	1415
BsiHKAI	GWGCWC	1 cut(s)	1955
BsiSI	CCGG	2 cut(s)	275, 2079
BslFI	GGGAC	4 cut(s)	231, 1168, 1250, 1642
BslI	CCNNNNNNNGG	9 cut(s)	816, 843, 922, 1448, 1449, 1473, 1596, 1931, 2440
BsmAI	GTCTC	2 cut(s)	633, 2019
BsmBI	CGTCTC	1 cut(s)	2019
BsmFI	GGGAC	4 cut(s)	231, 1168, 1250, 1642
BsnI	GGCC	1 cut(s)	133
Bsp1286I	GDGCHC	2 cut(s)	877, 1955
Bsp143I	GATC	6 cut(s)	487, 556, 664, 712, 943, 1732
Bsp1720I	GCTNAGC	1 cut(s)	1089
BspANI	GGCC	1 cut(s)	133
BspCNI	CTCAG	5 cut(s)	205, 1105, 1113, 1918, 1978
BspHI	TCATGA	1 cut(s)	2398
BspLI	GGNNCC	6 cut(s)	219, 835, 876, 1308, 1942, 2227
BspMAI	CTGCAG	1 cut(s)	73
BspPI	GGATC	1 cut(s)	1727
BspQI	GCTCTTC	1 cut(s)	1960
BspT107I	GGYRCC	4 cut(s)	833, 1306, 1940, 2225
BsrDI	GCAATG	3 cut(s)	821, 864, 1754
BsrFI	RCCGGY	1 cut(s)	2078
BsrI	ACTGG	5 cut(s)	796, 1144, 1162, 1501, 1636
BssAI	RCCGGY	1 cut(s)	2078
BssECI	CCNNGG	4 cut(s)	204, 438, 1565, 1811
BssMI	GATC	6 cut(s)	487, 556, 664, 712, 943, 1732
BssNI	GRCGYC	1 cut(s)	2012
BssT1I	CCWWGG	1 cut(s)	1565
Bst2UI	CCWGG	4 cut(s)	206, 530, 838, 1812
Bst4CI	ACNGT	5 cut(s)	296, 1259, 1416, 1807, 1836
Bst6I	CTCTTC	7 cut(s)	816, 1254, 1960, 2126, 2177, 2264, 2312
BstACI	GRCGYC	1 cut(s)	2012
BstAPI	GCANNNNNTGC	1 cut(s)	724
BstC8I	GCNNGC	5 cut(s)	135, 186, 1517, 2080, 2143
BstDEI	CTNAG	7 cut(s)	213, 1089, 1100, 1113, 1711, 1926, 1986
BstENI	CCTNNNNNAGG	1 cut(s)	1929
BstF5I	GGATG	7 cut(s)	691, 912, 931, 2096, 2120, 2159, 2171
BstH2I	RGCGCY	2 cut(s)	2085, 2142
BstHHI	GCGC	3 cut(s)	37, 2084, 2141
BstKTI	GATC	6 cut(s)	490, 559, 667, 715, 946, 1735
BstMAI	GTCTC	2 cut(s)	633, 2019
BstMBI	GATC	6 cut(s)	487, 556, 664, 712, 943, 1732
BstMCI	CGRYCG	1 cut(s)	1415
BstMWI	GCNNNNNNNGC	5 cut(s)	181, 724, 2145, 2286, 2295
BstNI	CCWGG	4 cut(s)	206, 530, 838, 1812
BstNSI	RCATGY	3 cut(s)	939, 1348, 2046
BstSCI	CCNGG	4 cut(s)	204, 528, 836, 1810
BstSFI	CTRYAG	2 cut(s)	69, 154
BstV1I	GCAGC	7 cut(s)	55, 83, 85, 94, 562, 1152, 2315
BstV2I	GAAGAC	1 cut(s)	2436
BstX2I	RGATCY	2 cut(s)	712, 1732
BstYI	RGATCY	2 cut(s)	712, 1732
Bsu36I	CCTNAGG	1 cut(s)	1926
BsuI	GTATCC	4 cut(s)	405, 709, 781, 1522
BsuRI	GGCC	1 cut(s)	133
BtsCI	GGATG	7 cut(s)	691, 912, 931, 2096, 2120, 2159, 2171
BtsI	GCAGTG	3 cut(s)	1755, 2056, 2155
BtsIMutI	CAGTG	4 cut(s)	1151, 1755, 2056, 2155
Cac8I	GCNNGC	5 cut(s)	135, 186, 1517, 2080, 2143
CaiI	CAGNNNCTG	1 cut(s)	1811
CciI	TCATGA	1 cut(s)	2398
CfoI	GCGC	3 cut(s)	37, 2084, 2141
Cfr10I	RCCGGY	1 cut(s)	2078
Cfr13I	GGNCC	5 cut(s)	27, 131, 218, 988, 1507
CseI	GACGC	1 cut(s)	567
CsiI	ACCWGGT	2 cut(s)	528, 836
Csp6I	GTAC	5 cut(s)	124, 160, 230, 834, 1608
CviQI	GTAC	5 cut(s)	124, 160, 230, 834, 1608
DdeI	CTNAG	7 cut(s)	213, 1089, 1100, 1113, 1711, 1926, 1986
DpnI	GATC	6 cut(s)	489, 558, 666, 714, 945, 1734
DpnII	GATC	6 cut(s)	487, 556, 664, 712, 943, 1732
DraIII	CACNNNGTG	1 cut(s)	1705
DrdI	GACNNNNNNGTC	1 cut(s)	1262
DseDI	GACNNNNNNGTC	1 cut(s)	1262
Eam1104I	CTCTTC	7 cut(s)	816, 1254, 1960, 2126, 2177, 2264, 2312
EarI	CTCTTC	7 cut(s)	816, 1254, 1960, 2126, 2177, 2264, 2312
EciI	GGCGGA	1 cut(s)	1502
Ecl136II	GAGCTC	1 cut(s)	1953
Eco130I	CCWWGG	1 cut(s)	1565
Eco24I	GRGCYC	2 cut(s)	877, 1955
Eco47I	GGWCC	4 cut(s)	27, 218, 988, 1507
Eco47III	AGCGCT	1 cut(s)	2140
Eco53kI	GAGCTC	1 cut(s)	1953
Eco57I	CTGAAG	6 cut(s)	71, 393, 1701, 1749, 2288, 2336
Eco81I	CCTNAGG	1 cut(s)	1926
EcoICRI	GAGCTC	1 cut(s)	1953
EcoNI	CCTNNNNNAGG	1 cut(s)	1929
EcoO109I	RGGNCCY	3 cut(s)	218, 988, 1507
EcoRI	GAATTC	1 cut(s)	1718
EcoRII	CCWGG	4 cut(s)	204, 528, 836, 1810
EcoT14I	CCWWGG	1 cut(s)	1565
EcoT38I	GRGCYC	2 cut(s)	877, 1955
ErhI	CCWWGG	1 cut(s)	1565
Esp3I	CGTCTC	1 cut(s)	2019
FalI	AAGNNNNNCTT	2 cut(s)	582, 614
FaqI	GGGAC	4 cut(s)	231, 1168, 1250, 1642
FauNDI	CATATG	2 cut(s)	546, 655
FbaI	TGATCA	1 cut(s)	943
FblI	GTMKAC	1 cut(s)	57
FokI	GGATG	7 cut(s)	678, 899, 938, 2103, 2127, 2166, 2178
FriOI	GRGCYC	2 cut(s)	877, 1955
FspBI	CTAG	3 cut(s)	582, 918, 1262
GlaI	GCGC	3 cut(s)	36, 2083, 2140
GsuI	CTGGAG	2 cut(s)	1179, 1980
HaeII	RGCGCY	2 cut(s)	2085, 2142
HaeIII	GGCC	1 cut(s)	133
HapII	CCGG	2 cut(s)	275, 2079
HgaI	GACGC	1 cut(s)	567
HhaI	GCGC	3 cut(s)	37, 2084, 2141
Hin1I	GRCGYC	1 cut(s)	2012
Hin6I	GCGC	3 cut(s)	35, 2082, 2139
HinP1I	GCGC	3 cut(s)	35, 2082, 2139
HincII	GTYRAC	2 cut(s)	1879, 1975
HindII	GTYRAC	2 cut(s)	1879, 1975
HinfI	GANTC	9 cut(s)	112, 200, 271, 316, 758, 1098, 1456, 1554, 1796
HpaI	GTTAAC	2 cut(s)	1879, 1975
HpaII	CCGG	2 cut(s)	275, 2079
HphI	GGTGA	4 cut(s)	674, 985, 1182, 2191
Hpy166II	GTNNAC	5 cut(s)	27, 58, 1151, 1879, 1975
Hpy8I	GTNNAC	5 cut(s)	27, 58, 1151, 1879, 1975
Hpy99I	CGWCG	1 cut(s)	639
HpyAV	CCTTC	7 cut(s)	122, 344, 563, 1019, 1846, 1925, 1991
HpyCH4III	ACNGT	5 cut(s)	296, 1259, 1416, 1807, 1836
HpyCH4IV	ACGT	2 cut(s)	637, 2012
HpyCH4V	TGCA	9 cut(s)	71, 477, 691, 718, 935, 1286, 1519, 1779, 2066
HpyF10VI	GCNNNNNNNGC	5 cut(s)	181, 724, 2145, 2286, 2295
HpyF3I	CTNAG	7 cut(s)	213, 1089, 1100, 1113, 1711, 1926, 1986
HpySE526I	ACGT	2 cut(s)	637, 2012
Hsp92I	GRCGYC	1 cut(s)	2012
HspAI	GCGC	3 cut(s)	35, 2082, 2139
KpnI	GGTACC	1 cut(s)	837
KroI	GCCGGC	1 cut(s)	2078
KroNI	GCCGGC	1 cut(s)	2080
Ksp22I	TGATCA	1 cut(s)	943
KspAI	GTTAAC	2 cut(s)	1879, 1975
Kzo9I	GATC	6 cut(s)	487, 556, 664, 712, 943, 1732
LguI	GCTCTTC	1 cut(s)	1960
LmnI	GCTCC	6 cut(s)	16, 572, 742, 880, 1961, 2039
Lsp1109I	GCAGC	7 cut(s)	55, 83, 85, 94, 562, 1152, 2315
LweI	GCATC	3 cut(s)	700, 1453, 1788
MabI	ACCWGGT	2 cut(s)	528, 836
MaeI	CTAG	3 cut(s)	582, 918, 1262
MaeII	ACGT	2 cut(s)	637, 2012
MaeIII	GTNAC	5 cut(s)	260, 802, 1705, 2008, 2414
MalI	GATC	6 cut(s)	489, 558, 666, 714, 945, 1734
MboI	GATC	6 cut(s)	487, 556, 664, 712, 943, 1732
MfeI	CAATTG	1 cut(s)	686
MflI	RGATCY	2 cut(s)	712, 1732
MhlI	GDGCHC	2 cut(s)	877, 1955
MlyI	GAGTC	2 cut(s)	194, 1092
MmeI	TCCRAC	4 cut(s)	674, 1397, 1561, 1818
MroNI	GCCGGC	1 cut(s)	2078
MseI	TTAA	9 cut(s)	141, 504, 605, 1331, 1878, 1914, 1974, 1980, 2455
MspA1I	CMGCKG	1 cut(s)	500
MspI	CCGG	2 cut(s)	275, 2079
MspR9I	CCNGG	4 cut(s)	206, 530, 838, 1812
MunI	CAATTG	1 cut(s)	686
MvaI	CCWGG	4 cut(s)	206, 530, 838, 1812
MwoI	GCNNNNNNNGC	5 cut(s)	181, 724, 2145, 2286, 2295
NaeI	GCCGGC	1 cut(s)	2080
NdeI	CATATG	2 cut(s)	546, 655
NdeII	GATC	6 cut(s)	487, 556, 664, 712, 943, 1732
NgoMIV	GCCGGC	1 cut(s)	2078
NlaIV	GGNNCC	6 cut(s)	219, 835, 876, 1308, 1942, 2227
NmuCI	GTSAC	3 cut(s)	260, 1705, 2008
NspI	RCATGY	3 cut(s)	939, 1348, 2046
PagI	TCATGA	1 cut(s)	2398
PciSI	GCTCTTC	1 cut(s)	1960
PdiI	GCCGGC	1 cut(s)	2080
PfeI	GAWTC	7 cut(s)	112, 271, 316, 758, 1456, 1554, 1796
PflMI	CCANNNNNTGG	3 cut(s)	816, 843, 1473
PleI	GAGTC	2 cut(s)	194, 1092
PpsI	GAGTC	2 cut(s)	194, 1092
PpuMI	RGGWCCY	3 cut(s)	218, 988, 1507
Psp124BI	GAGCTC	1 cut(s)	1955
Psp5II	RGGWCCY	3 cut(s)	218, 988, 1507
Psp6I	CCWGG	4 cut(s)	204, 528, 836, 1810
PspGI	CCWGG	4 cut(s)	204, 528, 836, 1810
PspN4I	GGNNCC	6 cut(s)	219, 835, 876, 1308, 1942, 2227
PspPI	GGNCC	5 cut(s)	27, 131, 218, 988, 1507
PspPPI	RGGWCCY	3 cut(s)	218, 988, 1507
PstI	CTGCAG	1 cut(s)	73
PstNI	CAGNNNCTG	1 cut(s)	1811
PsuI	RGATCY	2 cut(s)	712, 1732
PvuII	CAGCTG	1 cut(s)	500
RsaI	GTAC	5 cut(s)	125, 161, 231, 835, 1609
RsaNI	GTAC	5 cut(s)	124, 160, 230, 834, 1608
SacI	GAGCTC	1 cut(s)	1955
SapI	GCTCTTC	1 cut(s)	1960
SaqAI	TTAA	9 cut(s)	141, 504, 605, 1331, 1878, 1914, 1974, 1980, 2455
Sau3AI	GATC	6 cut(s)	487, 556, 664, 712, 943, 1732
Sau96I	GGNCC	5 cut(s)	27, 131, 218, 988, 1507
SchI	GAGTC	2 cut(s)	194, 1092
ScrFI	CCNGG	4 cut(s)	206, 530, 838, 1812
SduI	GDGCHC	2 cut(s)	877, 1955
SexAI	ACCWGGT	2 cut(s)	528, 836
SfaNI	GCATC	3 cut(s)	700, 1453, 1788
SfcI	CTRYAG	2 cut(s)	69, 154
SinI	GGWCC	4 cut(s)	27, 218, 988, 1507
SmlI	CTYRAG	2 cut(s)	20, 1948
SmoI	CTYRAG	2 cut(s)	20, 1948
SspMI	CTAG	3 cut(s)	582, 918, 1262
SstI	GAGCTC	1 cut(s)	1955
StyD4I	CCNGG	4 cut(s)	204, 528, 836, 1810
StyI	CCWWGG	1 cut(s)	1565
TaaI	ACNGT	5 cut(s)	296, 1259, 1416, 1807, 1836
TaiI	ACGT	2 cut(s)	640, 2015
TaqI	TCGA	4 cut(s)	280, 329, 1411, 1902
TatI	WGTACW	1 cut(s)	1607
TauI	GCSGC	5 cut(s)	1096, 2148, 2193, 2298, 2301
TfiI	GAWTC	7 cut(s)	112, 271, 316, 758, 1456, 1554, 1796
Tru1I	TTAA	9 cut(s)	141, 504, 605, 1331, 1878, 1914, 1974, 1980, 2455
Tru9I	TTAA	9 cut(s)	141, 504, 605, 1331, 1878, 1914, 1974, 1980, 2455
TscAI	CASTG	4 cut(s)	1151, 1755, 2056, 2155
TseFI	GTSAC	3 cut(s)	260, 1705, 2008
TseI	GCWGC	7 cut(s)	68, 71, 82, 98, 575, 1165, 2328
Tsp45I	GTSAC	3 cut(s)	260, 1705, 2008
TspDTI	ATGAA	8 cut(s)	563, 590, 735, 1223, 1385, 1506, 1665, 2415
TspGWI	ACGGA	1 cut(s)	168
TspRI	CASTG	4 cut(s)	1151, 1755, 2056, 2155
Van91I	CCANNNNNTGG	3 cut(s)	816, 843, 1473
VpaK11BI	GGWCC	4 cut(s)	27, 218, 988, 1507
XagI	CCTNNNNNAGG	1 cut(s)	1929
XapI	RAATTY	3 cut(s)	378, 1619, 1718
XbaI	TCTAGA	1 cut(s)	581
XceI	RCATGY	3 cut(s)	939, 1348, 2046
XcmI	CCANNNNNNNNNTGG	1 cut(s)	487
XmiI	GTMKAC	1 cut(s)	57
XspI	CTAG	3 cut(s)	582, 918, 1262
ZraI	GACGTC	1 cut(s)	2013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.