RchiOBHm_Chr1g0375071

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001384
Physical Location & Seq
Reverse (-)
62650679 .. 62656893
6215 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2391 bp
ATGGCCTCCACGAACTCAAACCCATCCGACCCACCTCTCTCGCCCGACGACCTCGCCGCCCGGGCTCTGAACAAACGCTACGAGGGTCTGGTCACCGTCCGAACCAAGGCCATAAAGGGCAAAGGAGCTTGGTACTGGACTCATTTGGAGCCGGTGATGGTTCGCAACCCAAACACCAACGTCCCCAAAGCTGTGAAGCTCAAGTGTCTTCTCTGCGACGCCGTTTTCTCGGCCTCGAACCCCTCCAGAACCGCCTCCGAGCACCTCAAGCGCGGCACGTGCCCGAATTTCACCTCCGTGTTGAGACCCAACTCGTCGGCGTCGCTGTCGCCGCAGCCCATATCGTCTCTGCCGTCGCCGTCTTCCCACAATCACAGAAAACGAAGCTCACAAATGGGTACTCTTCTCTCTCCTCTTTCTCAAGCTCCTCCCACCTCTGCTTCGATTCAAGTACATTCCTTGGCTATGATTGAGTCGTCCCCCGGCTTTTGCGGCGGAGAGCTTGGTTATTCGCAGGGTCCGAACCCGAACCCGGGCCCGGGCCCGAATCCTGTCGGGTTGAGTCAGCACCAGCACCACCATTTGGTGTTGTCGGGTGGGAAAGACGATTTGGGTGCTTTGGCAATGTTGGAAAACAGTGTCAAAAAGCTTAAAAGCCCCAAGCCTTCTTCCGCTAATGTTTCACTTACTAAGGAGCAGGTTGATTCTGCACTTGACTTGTTGTCTGAGTGGTTCTATGAGTCTTGTGGGTCTGTCTCGTTTTCGAGCCTCGAGCATCCCAAGTTCAAGGCCTTTCTCGGCCAGGTGGGCTTGCCTGCTGTGTTGCAGCGTGAGCTTTCGGGTGCTCGGCTTGATGCTAAGTTTGCTGAGGCTAAAGCCGAGTCTGAGGCTAGGATAAGGGATGCAATGTTTTTTCAAGTGGCTTCAGATGGTTGGGAATGTAATAATTTTTGCGGTGGGGAGGAGAGTATGGTTAAGTTTATGGTTAATCTCCCGAATGGGAGCAGTGTTTTTCAGAAGGCTGTGTTTACTGGAGGGTCAGTTTCGTCGAAATATGCTGAGGAGGTAATGTGGGATGCGGTTAGTGGCGTGTGTGGGAATGCTGTGCAGCGTTGCGTGGGGGTTGTTGCTGACAAGTATAAAGCCAAGGCATTGAGGAACTTGGAGAGTCAGAATCATTGGATGGTGAATGTTTCCTGTCAGCTACAGGGGTTTGTTTCTTTGATCAAGGATTTTAACAAAGAGCATAAGTTGTGTATGGTTGTTACTGATAATTGCGTGAAGGTTGCAAATTTTGTAAATACCACCACCGAGGTTAGGCGGATTTTTCAGAAGTACAAGATGCAGGAGCTTGGCTATGGTGGGCTGCTCCAAGTTTCTTCTTCCAAATGCGATAATTCAAAAAACTATGCGCCTGTTTATGCAATGCTGGAGGATATGTTGACCTGTTCCCGCATACTCCAAATGGTTGTCTTGGATGATTGCTATAAGGTGGCATGTGTGGAGGATCCAAGTGCTAGGGAAGTTGCAGCGCTGATTCAAAGTGAAGGATTCTGGAATGAACTAGAGGCAGTTTATTCACTTATGAAGCTGATAAGAGGGATGGCTCAGGAGATTGAAGCTGAGAGGCCATTAATTGGGCAATGCCTGCCTCTTTGGGAAGAGTTGCGAACAAAAGTAAAGGATTGGTGTGCCAAGTTTAACATTGATGAAGGACCTGTTGAGAAAATAGTTGAAAAACGCTTCGCAAAGAATTACCACCCAGCATGGTCGGCTGCATTCATACTTGATCCACAATACCTGATGAAGGATGCTAGTGGAAAGTACCTTCCACCATTCAAGTGCTTGACGCATGAGCAGGAGAAGGATGTAGATAAGCTCATTACCAGATTGGTATCCAGGGAAGAAGCGCATGTTGCACTAATGGAACTCATGAAATGGAGGACAGAAGGAATGGACCCACTTTATGCTCAGGCAGTTCAAGTTAAACAGCAAGATCCTGTTACTGGAAAAATGAAAATTGCAAACCCGCAGAGCAGTAGACTTGTGTGGGAAACTTGTCTAAGCAAGTTAAACATACTGGGGAAGGTTGCAGTGAGACTTATCTTCCTCCATGCAACCTCATTTGGATTCAAGTGTAATTGGTCTTTCATGAAATGGATTTGTGTACATAGGCACTCAAGGATAGGCCTGGAAAGGGCAGAGAAGATGATATTCATTGCAGCTCATGCGAAGCTTGAAAGAAGGGATCTTTCTAACGACGAAGAAAGGGAAGCAGAGCTGTTTGCGACTGCGAGTGTTGATGAGGACATGCTGAATGAGGTCCTTTCCGATGCACCCACAGTACTAGGGTTGCTTGAATCGGTTGGGTGGATGGCAAACCAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

796

Amino Acids

88.15

Weight (kDa)

7.93

Isoelectric Point (pI)

44.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7963 PF25908 16 - 98 2.6e-45 Domain of unknown function (DUF7963)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 688
AccB7I CCANNNNNTGG 2 cut(s) 583, 1637
AccI GTMKAC 1 cut(s) 2041
AccII CGCG 1 cut(s) 273
AclWI GGATC 5 cut(s) 1502, 1515, 1784, 1991, 2256
AcoI YGGCCR 1 cut(s) 799
AcsI RAATTY 2 cut(s) 286, 1291
AcuI CTGAAG 1 cut(s) 909
AcvI CACGTG 1 cut(s) 279
AcyI GRCGYC 2 cut(s) 219, 320
AfaI GTAC 7 cut(s) 134, 400, 453, 1337, 1826, 2169, 2346
AfeI AGCGCT 1 cut(s) 1533
AhdI GACNNNNNGTC 1 cut(s) 721
AjnI CCWGG 4 cut(s) 801, 1898, 2190, 2382
AjuI GAANNNNNNNTTGG 2 cut(s) 593, 625
AleI CACNNNNGTG 1 cut(s) 296
Alw21I GWGCWC 2 cut(s) 264, 847
Alw26I GTCTC 4 cut(s) 298, 351, 760, 2092
AlwI GGATC 5 cut(s) 1502, 1515, 1784, 1991, 2256
Ama87I CYCGRG 4 cut(s) 60, 532, 538, 770
Aor51HI AGCGCT 1 cut(s) 1533
AoxI GGCC 9 cut(s) 3, 108, 231, 535, 541, 789, 799, 1628, 2188
ApaI GGGCCC 2 cut(s) 539, 545
ApeKI GCWGC 7 cut(s) 334, 826, 1108, 1366, 1529, 1775, 2222
ApoI RAATTY 2 cut(s) 286, 1291
AseI ATTAAT 1 cut(s) 1634
AspLEI GCGC 4 cut(s) 273, 1414, 1534, 1912
AspS9I GGNCC 8 cut(s) 518, 535, 536, 541, 542, 1715, 1957, 2323
AsuC2I CCSGG 7 cut(s) 61, 62, 483, 533, 534, 539, 540
AsuHPI GGTGA 4 cut(s) 85, 166, 283, 1198
AvaI CYCGRG 4 cut(s) 60, 532, 538, 770
AvaII GGWCC 4 cut(s) 518, 1715, 1957, 2323
BaeGI GKGCMC 3 cut(s) 284, 539, 545
BamHI GGATCC 1 cut(s) 1507
BanII GRGCYC 3 cut(s) 67, 539, 545
BbrPI CACGTG 1 cut(s) 279
BbsI GAAGAC 2 cut(s) 200, 354
Bbv12I GWGCWC 2 cut(s) 264, 847
BbvCI CCTCAGC 2 cut(s) 867, 1059
BbvI GCAGC 7 cut(s) 346, 838, 1120, 1353, 1541, 1762, 2234
BccI CCATC 6 cut(s) 31, 151, 923, 1177, 1597, 2368
BceAI ACGGC 3 cut(s) 206, 337, 343
BcgI CGANNNNNNTGC 2 cut(s) 596, 630
BciT130I CCWGG 4 cut(s) 803, 1900, 2192, 2384
BciVI GTATCC 1 cut(s) 1906
BclI TGATCA 1 cut(s) 1224
BcnI CCSGG 7 cut(s) 61, 62, 483, 533, 534, 539, 540
BcoDI GTCTC 4 cut(s) 298, 351, 760, 2092
BfaI CTAG 5 cut(s) 891, 1518, 1565, 1815, 2348
BfmI CTRYAG 1 cut(s) 1205
BfoI RGCGCY 1 cut(s) 1535
BfuAI ACCTGC 1 cut(s) 688
BfuI GTATCC 1 cut(s) 1906
BglI GCCNNNNNGGC 2 cut(s) 62, 807
BmcAI AGTACT 1 cut(s) 2346
Bme18I GGWCC 4 cut(s) 518, 1715, 1957, 2323
BmeRI GACNNNNNGTC 1 cut(s) 721
BmeT110I CYCGRG 4 cut(s) 60, 532, 538, 770
BmgT120I GGNCC 8 cut(s) 518, 535, 536, 541, 542, 1715, 1957, 2323
BmiI GGNNCC 6 cut(s) 150, 519, 537, 543, 1509, 1959
BmrI ACTGGG 1 cut(s) 2090
BmsI GCATC 7 cut(s) 784, 844, 892, 1066, 1332, 1801, 2323
BmuI ACTGGG 1 cut(s) 2090
BpiI GAAGAC 2 cut(s) 200, 354
BpmI CTGGAG 3 cut(s) 229, 1053, 1451
Bpu10I CCTNAGC 4 cut(s) 867, 1059, 1608, 1971
BpuEI CTTGAG 4 cut(s) 185, 251, 405, 2164
BpuMI CCSGG 7 cut(s) 61, 62, 483, 533, 534, 539, 540
BsaAI YACGTR 1 cut(s) 279
BsaBI GATNNNNATC 1 cut(s) 1894
BsaHI GRCGYC 2 cut(s) 219, 320
BsaI GGTCTC 1 cut(s) 298
BsaJI CCNNGG 9 cut(s) 60, 105, 459, 481, 532, 538, 1146, 1311, 1899
BsaXI ACNNNNNCTCC 6 cut(s) 1026, 1055, 1056, 1085, 1424, 1454
Bse118I RCCGGY 1 cut(s) 151
Bse1I ACTGG 4 cut(s) 140, 1036, 2011, 2085
Bse3DI GCAATG 5 cut(s) 630, 912, 1431, 1649, 2217
Bse8I GATNNNNATC 1 cut(s) 1894
BseBI CCWGG 4 cut(s) 803, 1900, 2192, 2384
BseDI CCNNGG 9 cut(s) 60, 105, 459, 481, 532, 538, 1146, 1311, 1899
BseJI GATNNNNATC 1 cut(s) 1894
BseMI GCAATG 5 cut(s) 630, 912, 1431, 1649, 2217
BseMII CTCAG 7 cut(s) 717, 858, 876, 1050, 1614, 1622, 1985
BseNI ACTGG 4 cut(s) 140, 1036, 2011, 2085
BseRI GAGGAG 4 cut(s) 402, 417, 977, 1076
BseSI GKGCMC 3 cut(s) 284, 539, 545
BseXI GCAGC 7 cut(s) 346, 838, 1120, 1353, 1541, 1762, 2234
BseYI CCCAGC 1 cut(s) 1762
BsgI GTGCAG 2 cut(s) 693, 1127
Bsh1236I CGCG 1 cut(s) 273
BshFI GGCC 9 cut(s) 5, 110, 233, 537, 543, 791, 801, 1630, 2190
BsiHKAI GWGCWC 2 cut(s) 264, 847
BsiHKCI CYCGRG 4 cut(s) 60, 532, 538, 770
BsiSI CCGG 5 cut(s) 61, 152, 483, 533, 539
BslFI GGGAC 2 cut(s) 167, 463
BsmAI GTCTC 4 cut(s) 298, 351, 760, 2092
BsmBI CGTCTC 1 cut(s) 351
BsmFI GGGAC 2 cut(s) 167, 463
BsmI GAATGC 2 cut(s) 1105, 1778
BsnI GGCC 9 cut(s) 5, 110, 233, 537, 543, 791, 801, 1630, 2190
Bso31I GGTCTC 1 cut(s) 298
BsoBI CYCGRG 4 cut(s) 60, 532, 538, 770
Bsp120I GGGCCC 2 cut(s) 535, 541
Bsp1286I GDGCHC 6 cut(s) 67, 264, 284, 539, 545, 847
Bsp1407I TGTACA 1 cut(s) 2167
Bsp143I GATC 5 cut(s) 1224, 1507, 1789, 1996, 2248
BspANI GGCC 9 cut(s) 5, 110, 233, 537, 543, 791, 801, 1630, 2190
BspCNI CTCAG 7 cut(s) 718, 859, 877, 1051, 1615, 1621, 1984
BspFNI CGCG 1 cut(s) 273
BspHI TCATGA 2 cut(s) 1932, 2151
BspLI GGNNCC 6 cut(s) 150, 519, 537, 543, 1509, 1959
BspMI ACCTGC 1 cut(s) 688
BspPI GGATC 5 cut(s) 1502, 1515, 1784, 1991, 2256
BspTNI GGTCTC 1 cut(s) 298
BsrDI GCAATG 5 cut(s) 630, 912, 1431, 1649, 2217
BsrFI RCCGGY 1 cut(s) 151
BsrGI TGTACA 1 cut(s) 2167
BsrI ACTGG 4 cut(s) 140, 1036, 2011, 2085
BssAI RCCGGY 1 cut(s) 151
BssECI CCNNGG 9 cut(s) 60, 105, 459, 481, 532, 538, 1146, 1311, 1899
BssMI GATC 5 cut(s) 1224, 1507, 1789, 1996, 2248
BssNI GRCGYC 2 cut(s) 219, 320
BssT1I CCWWGG 3 cut(s) 105, 459, 1146
Bst2UI CCWGG 4 cut(s) 803, 1900, 2192, 2384
Bst4CI ACNGT 3 cut(s) 97, 638, 2344
Bst6I CTCTTC 2 cut(s) 408, 1656
BstACI GRCGYC 2 cut(s) 219, 320
BstAPI GCANNNNNTGC 2 cut(s) 1648, 2228
BstAUI TGTACA 1 cut(s) 2167
BstBAI YACGTR 1 cut(s) 279
BstC8I GCNNGC 3 cut(s) 812, 816, 1649
BstEII GGTNACC 1 cut(s) 91
BstENI CCTNNNNNAGG 1 cut(s) 1805
BstFNI CGCG 1 cut(s) 273
BstH2I RGCGCY 1 cut(s) 1535
BstHHI GCGC 4 cut(s) 273, 1414, 1534, 1912
BstKTI GATC 5 cut(s) 1227, 1510, 1792, 1999, 2251
BstMAI GTCTC 4 cut(s) 298, 351, 760, 2092
BstMBI GATC 5 cut(s) 1224, 1507, 1789, 1996, 2248
BstNI CCWGG 4 cut(s) 803, 1900, 2192, 2384
BstNSI RCATGY 3 cut(s) 1500, 1916, 2314
BstPI GGTNACC 1 cut(s) 91
BstSFI CTRYAG 1 cut(s) 1205
BstSLI GKGCMC 3 cut(s) 284, 539, 545
BstUI CGCG 1 cut(s) 273
BstV1I GCAGC 7 cut(s) 346, 838, 1120, 1353, 1541, 1762, 2234
BstV2I GAAGAC 2 cut(s) 200, 354
BstX2I RGATCY 3 cut(s) 1507, 1996, 2248
BstYI RGATCY 3 cut(s) 1507, 1996, 2248
BsuI GTATCC 1 cut(s) 1906
BsuRI GGCC 9 cut(s) 5, 110, 233, 537, 543, 791, 801, 1630, 2190
BtsI GCAGTG 2 cut(s) 1012, 2100
BtsIMutI CAGTG 3 cut(s) 643, 1012, 2100
BveI ACCTGC 1 cut(s) 688
Cac8I GCNNGC 3 cut(s) 812, 816, 1649
CciI TCATGA 2 cut(s) 1932, 2151
CfoI GCGC 4 cut(s) 273, 1414, 1534, 1912
Cfr10I RCCGGY 1 cut(s) 151
Cfr13I GGNCC 8 cut(s) 518, 535, 536, 541, 542, 1715, 1957, 2323
Cfr9I CCCGGG 3 cut(s) 60, 532, 538
CseI GACGC 3 cut(s) 227, 309, 1858
Csp6I GTAC 7 cut(s) 133, 399, 452, 1336, 1825, 2168, 2345
CviAII CATG 9 cut(s) 1497, 1767, 1853, 1913, 1933, 2114, 2152, 2228, 2311
CviQI GTAC 7 cut(s) 133, 399, 452, 1336, 1825, 2168, 2345
DpnI GATC 5 cut(s) 1226, 1509, 1791, 1998, 2250
DpnII GATC 5 cut(s) 1224, 1507, 1789, 1996, 2248
DriI GACNNNNNGTC 1 cut(s) 721
EaeI YGGCCR 1 cut(s) 799
Eam1104I CTCTTC 2 cut(s) 408, 1656
Eam1105I GACNNNNNGTC 1 cut(s) 721
EarI CTCTTC 2 cut(s) 408, 1656
EciI GGCGGA 2 cut(s) 510, 1336
Eco130I CCWWGG 3 cut(s) 105, 459, 1146
Eco147I AGGCCT 2 cut(s) 791, 2190
Eco24I GRGCYC 3 cut(s) 67, 539, 545
Eco31I GGTCTC 1 cut(s) 298
Eco47I GGWCC 4 cut(s) 518, 1715, 1957, 2323
Eco47III AGCGCT 1 cut(s) 1533
Eco57I CTGAAG 1 cut(s) 909
Eco72I CACGTG 1 cut(s) 279
Eco88I CYCGRG 4 cut(s) 60, 532, 538, 770
Eco91I GGTNACC 1 cut(s) 91
EcoNI CCTNNNNNAGG 1 cut(s) 1805
EcoO109I RGGNCCY 2 cut(s) 1715, 2323
EcoO65I GGTNACC 1 cut(s) 91
EcoRII CCWGG 4 cut(s) 801, 1898, 2190, 2382
EcoT14I CCWWGG 3 cut(s) 105, 459, 1146
EcoT38I GRGCYC 3 cut(s) 67, 539, 545
ErhI CCWWGG 3 cut(s) 105, 459, 1146
Esp3I CGTCTC 1 cut(s) 351
FaeI CATG 9 cut(s) 1500, 1770, 1856, 1916, 1936, 2117, 2155, 2231, 2314
FaqI GGGAC 2 cut(s) 167, 463
FatI CATG 9 cut(s) 1496, 1766, 1852, 1912, 1932, 2113, 2151, 2227, 2310
FauI CCCGC 2 cut(s) 1460, 2037
FbaI TGATCA 1 cut(s) 1224
FblI GTMKAC 1 cut(s) 2041
FriOI GRGCYC 3 cut(s) 67, 539, 545
FspBI CTAG 5 cut(s) 891, 1518, 1565, 1815, 2348
GlaI GCGC 4 cut(s) 272, 1413, 1533, 1911
GsaI CCCAGC 1 cut(s) 1766
GsuI CTGGAG 3 cut(s) 229, 1053, 1451
HaeII RGCGCY 1 cut(s) 1535
HaeIII GGCC 9 cut(s) 5, 110, 233, 537, 543, 791, 801, 1630, 2190
HapII CCGG 5 cut(s) 61, 152, 483, 533, 539
HgaI GACGC 3 cut(s) 227, 309, 1858
HhaI GCGC 4 cut(s) 273, 1414, 1534, 1912
Hin1I GRCGYC 2 cut(s) 219, 320
Hin1II CATG 9 cut(s) 1500, 1770, 1856, 1916, 1936, 2117, 2155, 2231, 2314
Hin6I GCGC 4 cut(s) 271, 1412, 1532, 1910
HinP1I GCGC 4 cut(s) 271, 1412, 1532, 1910
HincII GTYRAC 1 cut(s) 1443
HindII GTYRAC 1 cut(s) 1443
HindIII AAGCTT 2 cut(s) 647, 2234
HpaII CCGG 5 cut(s) 61, 152, 483, 533, 539
HphI GGTGA 4 cut(s) 85, 166, 283, 1198
Hpy166II GTNNAC 4 cut(s) 1029, 1443, 2042, 2168
Hpy188III TCNNGA 6 cut(s) 246, 994, 1555, 1610, 1933, 2152
Hpy8I GTNNAC 4 cut(s) 1029, 1443, 2042, 2168
Hpy99I CGWCG 7 cut(s) 50, 221, 319, 325, 358, 1051, 2264
HpyCH4III ACNGT 3 cut(s) 97, 638, 2344
HpyCH4IV ACGT 2 cut(s) 180, 278
HpySE526I ACGT 2 cut(s) 180, 278
Hsp92I GRCGYC 2 cut(s) 219, 320
Hsp92II CATG 9 cut(s) 1500, 1770, 1856, 1916, 1936, 2117, 2155, 2231, 2314
HspAI GCGC 4 cut(s) 271, 1412, 1532, 1910
Ksp22I TGATCA 1 cut(s) 1224
Kzo9I GATC 5 cut(s) 1224, 1507, 1789, 1996, 2248
LmnI GCTCC 7 cut(s) 125, 148, 430, 694, 1002, 1348, 1374
Lsp1109I GCAGC 7 cut(s) 346, 838, 1120, 1353, 1541, 1762, 2234
LweI GCATC 7 cut(s) 784, 844, 892, 1066, 1332, 1801, 2323
MaeI CTAG 5 cut(s) 891, 1518, 1565, 1815, 2348
MaeII ACGT 2 cut(s) 180, 278
MaeIII GTNAC 3 cut(s) 91, 1264, 2002
MalI GATC 5 cut(s) 1226, 1509, 1791, 1998, 2250
MboI GATC 5 cut(s) 1224, 1507, 1789, 1996, 2248
MflI RGATCY 3 cut(s) 1507, 1996, 2248
MhlI GDGCHC 6 cut(s) 67, 264, 284, 539, 545, 847
MluCI AATT 9 cut(s) 286, 946, 1273, 1291, 1396, 1635, 1753, 2019, 2140
MlyI GAGTC 6 cut(s) 133, 482, 571, 749, 890, 1177
MmeI TCCRAC 2 cut(s) 51, 609
MseI TTAA 8 cut(s) 651, 975, 987, 1236, 1634, 1701, 1986, 2072
MslI CAYNNNNRTG 2 cut(s) 296, 1840
MspI CCGG 5 cut(s) 61, 152, 483, 533, 539
Mva1269I GAATGC 2 cut(s) 1105, 1778
MvaI CCWGG 4 cut(s) 803, 1900, 2192, 2384
MvnI CGCG 1 cut(s) 273
NciI CCSGG 7 cut(s) 61, 62, 483, 533, 534, 539, 540
NdeII GATC 5 cut(s) 1224, 1507, 1789, 1996, 2248
NlaIII CATG 9 cut(s) 1500, 1770, 1856, 1916, 1936, 2117, 2155, 2231, 2314
NlaIV GGNNCC 6 cut(s) 150, 519, 537, 543, 1509, 1959
NmeAIII GCCGAG 4 cut(s) 209, 777, 826, 904
NmuCI GTSAC 1 cut(s) 91
NspI RCATGY 3 cut(s) 1500, 1916, 2314
OliI CACNNNNGTG 1 cut(s) 296
PaeR7I CTCGAG 1 cut(s) 770
PagI TCATGA 2 cut(s) 1932, 2151
PceI AGGCCT 2 cut(s) 791, 2190
PcsI WCGNNNNNNNCGW 2 cut(s) 350, 518
PctI GAATGC 2 cut(s) 1105, 1778
PfeI GAWTC 8 cut(s) 445, 547, 704, 1174, 1537, 1551, 2130, 2360
PflMI CCANNNNNTGG 2 cut(s) 583, 1637
PleI GAGTC 6 cut(s) 133, 481, 570, 748, 889, 1176
PmaCI CACGTG 1 cut(s) 279
PmlI CACGTG 1 cut(s) 279
PpsI GAGTC 6 cut(s) 133, 481, 570, 748, 889, 1176
Ppu21I YACGTR 1 cut(s) 279
PpuMI RGGWCCY 2 cut(s) 1715, 2323
PshBI ATTAAT 1 cut(s) 1634
Psp5II RGGWCCY 2 cut(s) 1715, 2323
Psp6I CCWGG 4 cut(s) 801, 1898, 2190, 2382
PspCI CACGTG 1 cut(s) 279
PspEI GGTNACC 1 cut(s) 91
PspFI CCCAGC 1 cut(s) 1762
PspGI CCWGG 4 cut(s) 801, 1898, 2190, 2382
PspN4I GGNNCC 6 cut(s) 150, 519, 537, 543, 1509, 1959
PspOMI GGGCCC 2 cut(s) 535, 541
PspPI GGNCC 8 cut(s) 518, 535, 536, 541, 542, 1715, 1957, 2323
PspPPI RGGWCCY 2 cut(s) 1715, 2323
PspXI VCTCGAGB 1 cut(s) 770
PsrI GAACNNNNNNTAC 2 cut(s) 62, 94
PsuI RGATCY 3 cut(s) 1507, 1996, 2248
RsaI GTAC 7 cut(s) 134, 400, 453, 1337, 1826, 2169, 2346
RsaNI GTAC 7 cut(s) 133, 399, 452, 1336, 1825, 2168, 2345
RseI CAYNNNNRTG 2 cut(s) 296, 1840
SaqAI TTAA 8 cut(s) 651, 975, 987, 1236, 1634, 1701, 1986, 2072
Sau3AI GATC 5 cut(s) 1224, 1507, 1789, 1996, 2248
Sau96I GGNCC 8 cut(s) 518, 535, 536, 541, 542, 1715, 1957, 2323
ScaI AGTACT 1 cut(s) 2346
SchI GAGTC 6 cut(s) 133, 482, 571, 749, 890, 1177
SduI GDGCHC 6 cut(s) 67, 264, 284, 539, 545, 847
SfaNI GCATC 7 cut(s) 784, 844, 892, 1066, 1332, 1801, 2323
SfcI CTRYAG 1 cut(s) 1205
Sfr274I CTCGAG 1 cut(s) 770
SinI GGWCC 4 cut(s) 518, 1715, 1957, 2323
SlaI CTCGAG 1 cut(s) 770
SmaI CCCGGG 3 cut(s) 62, 534, 540
SmiMI CAYNNNNRTG 2 cut(s) 296, 1840
SmlI CTYRAG 5 cut(s) 200, 266, 420, 770, 2179
SmoI CTYRAG 5 cut(s) 200, 266, 420, 770, 2179
SrfI GCCCGGGC 2 cut(s) 62, 540
Sse9I AATT 9 cut(s) 286, 946, 1273, 1291, 1396, 1635, 1753, 2019, 2140
SseBI AGGCCT 2 cut(s) 791, 2190
SspMI CTAG 5 cut(s) 891, 1518, 1565, 1815, 2348
StuI AGGCCT 2 cut(s) 791, 2190
StyI CCWWGG 3 cut(s) 105, 459, 1146
TaaI ACNGT 3 cut(s) 97, 638, 2344
TaiI ACGT 2 cut(s) 183, 281
TaqI TCGA 5 cut(s) 236, 443, 764, 771, 1049
TasI AATT 9 cut(s) 286, 946, 1273, 1291, 1396, 1635, 1753, 2019, 2140
TatI WGTACW 4 cut(s) 451, 1335, 2167, 2344
TauI GCSGC 4 cut(s) 59, 276, 334, 495
TfiI GAWTC 8 cut(s) 445, 547, 704, 1174, 1537, 1551, 2130, 2360
Tru1I TTAA 8 cut(s) 651, 975, 987, 1236, 1634, 1701, 1986, 2072
Tru9I TTAA 8 cut(s) 651, 975, 987, 1236, 1634, 1701, 1986, 2072
TscAI CASTG 3 cut(s) 643, 1012, 2100
TseFI GTSAC 1 cut(s) 91
TseI GCWGC 7 cut(s) 334, 826, 1108, 1366, 1529, 1775, 2222
Tsp45I GTSAC 1 cut(s) 91
TspGWI ACGGA 1 cut(s) 286
TspMI CCCGGG 3 cut(s) 60, 532, 538
TspRI CASTG 3 cut(s) 643, 1012, 2100
Van91I CCANNNNNTGG 2 cut(s) 583, 1637
VpaK11BI GGWCC 4 cut(s) 518, 1715, 1957, 2323
VspI ATTAAT 1 cut(s) 1634
XagI CCTNNNNNAGG 1 cut(s) 1805
XapI RAATTY 2 cut(s) 286, 1291
XceI RCATGY 3 cut(s) 1500, 1916, 2314
XhoI CTCGAG 1 cut(s) 770
XmaI CCCGGG 3 cut(s) 60, 532, 538
XmiI GTMKAC 1 cut(s) 2041
XspI CTAG 5 cut(s) 891, 1518, 1565, 1815, 2348
ZrmI AGTACT 1 cut(s) 2346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.