Transducin WD40 repeat-like superfamily protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom07g22180 |
| rosa_chinensis | RchiOBHm_Chr1g0321941 RchiOBHm_Chr1g0336421 RchiOBHm_Chr1g0336431 RchiOBHm_Chr2g0152681 RchiOBHm_Chr6g0266281 RchiOBHm_Chr6g0291341 RchiOBHm_Chr7g0206361 RchiOBHm_Chr7g0226181 RchiOBHm_Chr7g0227301 |
| rosa_laevigata | RLG00000029446 |
| rosa_roxburghii | Rroxscaffold_4G00309910 Rroxscaffold_5G00337020 |
| rosa_rugosa | Rorug03G0291300 Rorug05G0042900 |
| rosa_samantha | Rh2DG366500 Rh4CG031800 Rh4DG156100 Rh5AG465100 Rh5BG454800 Rh5BG454900 Rh5CG477100 Rh5DG469300 Rh6AG188300 Rh6CG344100 Rh7DG235800 Rh7DG398700 |
| rosa_wichuraiana | Rw4G002250 Rw4G009330 Rw4G009480 Rw7G041390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 170 |
| AclI | AACGTT | 1 cut(s) | 18 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 90, 170 |
| AgsI | TTSAA | 1 cut(s) | 32 |
| AjiI | CACGTC | 1 cut(s) | 38 |
| AjnI | CCWGG | 1 cut(s) | 111 |
| AluBI | AGCT | 3 cut(s) | 28, 65, 141 |
| AluI | AGCT | 3 cut(s) | 28, 65, 141 |
| Ama87I | CYCGRG | 1 cut(s) | 84 |
| AsuC2I | CCSGG | 2 cut(s) | 85, 86 |
| AvaI | CYCGRG | 1 cut(s) | 84 |
| BciT130I | CCWGG | 1 cut(s) | 113 |
| BcnI | CCSGG | 2 cut(s) | 85, 86 |
| Bme1390I | CCNGG | 3 cut(s) | 85, 86, 113 |
| BmeT110I | CYCGRG | 1 cut(s) | 84 |
| BmgBI | CACGTC | 1 cut(s) | 38 |
| BmrFI | CCNGG | 3 cut(s) | 85, 86, 113 |
| BmsI | GCATC | 1 cut(s) | 70 |
| BpmI | CTGGAG | 1 cut(s) | 95 |
| BpuMI | CCSGG | 2 cut(s) | 85, 86 |
| BsaJI | CCNNGG | 1 cut(s) | 84 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 90, 170 |
| BseBI | CCWGG | 1 cut(s) | 113 |
| BseDI | CCNNGG | 1 cut(s) | 84 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 90, 170 |
| BsiHKCI | CYCGRG | 1 cut(s) | 84 |
| BsiSI | CCGG | 1 cut(s) | 85 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 90, 170 |
| BsoBI | CYCGRG | 1 cut(s) | 84 |
| BssECI | CCNNGG | 1 cut(s) | 84 |
| Bst2UI | CCWGG | 1 cut(s) | 113 |
| BstDEI | CTNAG | 1 cut(s) | 122 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 138 |
| BstNI | CCWGG | 1 cut(s) | 113 |
| BstNSI | RCATGY | 1 cut(s) | 182 |
| BstSCI | CCNGG | 3 cut(s) | 83, 84, 111 |
| BtgZI | GCGATG | 1 cut(s) | 93 |
| BtrI | CACGTC | 1 cut(s) | 38 |
| Cfr9I | CCCGGG | 1 cut(s) | 84 |
| CviAII | CATG | 1 cut(s) | 179 |
| CviJI | RGCY | 4 cut(s) | 28, 65, 116, 141 |
| CviKI_1 | RGCY | 4 cut(s) | 28, 65, 116, 141 |
| DdeI | CTNAG | 1 cut(s) | 122 |
| Eco88I | CYCGRG | 1 cut(s) | 84 |
| EcoRII | CCWGG | 1 cut(s) | 111 |
| FaeI | CATG | 1 cut(s) | 182 |
| FaiI | YATR | 3 cut(s) | 74, 180, 187 |
| FatI | CATG | 1 cut(s) | 178 |
| GsuI | CTGGAG | 1 cut(s) | 95 |
| HapII | CCGG | 1 cut(s) | 85 |
| Hin1II | CATG | 1 cut(s) | 182 |
| HincII | GTYRAC | 1 cut(s) | 13 |
| HindII | GTYRAC | 1 cut(s) | 13 |
| HindIII | AAGCTT | 1 cut(s) | 26 |
| HpaI | GTTAAC | 1 cut(s) | 13 |
| HpaII | CCGG | 1 cut(s) | 85 |
| Hpy166II | GTNNAC | 1 cut(s) | 13 |
| Hpy8I | GTNNAC | 1 cut(s) | 13 |
| Hpy99I | CGWCG | 1 cut(s) | 39 |
| HpyCH4IV | ACGT | 2 cut(s) | 18, 37 |
| HpyCH4V | TGCA | 1 cut(s) | 132 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 138 |
| HpyF3I | CTNAG | 1 cut(s) | 122 |
| HpySE526I | ACGT | 2 cut(s) | 18, 37 |
| Hsp92II | CATG | 1 cut(s) | 182 |
| KspAI | GTTAAC | 1 cut(s) | 13 |
| LmnI | GCTCC | 1 cut(s) | 138 |
| LpnPI | CCDG | 3 cut(s) | 98, 98, 125 |
| LweI | GCATC | 1 cut(s) | 70 |
| MaeII | ACGT | 2 cut(s) | 18, 37 |
| MaeIII | GTNAC | 1 cut(s) | 56 |
| MnlI | CCTC | 1 cut(s) | 84 |
| MseI | TTAA | 2 cut(s) | 12, 21 |
| MspI | CCGG | 1 cut(s) | 85 |
| MspR9I | CCNGG | 3 cut(s) | 85, 86, 113 |
| MvaI | CCWGG | 1 cut(s) | 113 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 138 |
| NciI | CCSGG | 2 cut(s) | 85, 86 |
| NlaIII | CATG | 1 cut(s) | 182 |
| NmuCI | GTSAC | 1 cut(s) | 56 |
| NspI | RCATGY | 1 cut(s) | 182 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 15 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 170 |
| Psp1406I | AACGTT | 1 cut(s) | 18 |
| Psp6I | CCWGG | 1 cut(s) | 111 |
| PspGI | CCWGG | 1 cut(s) | 111 |
| SaqAI | TTAA | 2 cut(s) | 12, 21 |
| ScrFI | CCNGG | 3 cut(s) | 85, 86, 113 |
| SetI | ASST | 6 cut(s) | 21, 30, 40, 67, 95, 143 |
| SfaNI | GCATC | 1 cut(s) | 70 |
| SmaI | CCCGGG | 1 cut(s) | 86 |
| SspI | AATATT | 1 cut(s) | 103 |
| StyD4I | CCNGG | 3 cut(s) | 83, 84, 111 |
| TaiI | ACGT | 2 cut(s) | 21, 40 |
| TaqII | GACCGA | 1 cut(s) | 75 |
| Tru1I | TTAA | 2 cut(s) | 12, 21 |
| Tru9I | TTAA | 2 cut(s) | 12, 21 |
| TseFI | GTSAC | 1 cut(s) | 56 |
| Tsp45I | GTSAC | 1 cut(s) | 56 |
| TspDTI | ATGAA | 1 cut(s) | 95 |
| TspMI | CCCGGG | 1 cut(s) | 84 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 170 |
| XceI | RCATGY | 1 cut(s) | 182 |
| XmaI | CCCGGG | 1 cut(s) | 84 |