Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002643

Physical Location & Seq

Genomic Coordinates Reverse (-)

15700510 .. 15706682

Gene Structure 6173 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ55666

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2892 bp

ATGGATGATAGTCTATACGACGAGTTCGGGAACTATATAGGACCCGAAATCGAGTCTGACCAGGAGAGTGATAGGGAGGAAGAAGATGAGGAGCTTCCCGATAGGTTAGAAGATAGAGGTGCGGCAGCTGTCGGTGAGGATGCTCAGAATGGGTGGATGACTGCCTCTAATGATGTAGATATGGACAACCAGGTTGTTCTTGCTGAGGATAAGAAGTATTATCCTACAGCGGAGGAGGTGTACGGTGAAGATGTCGAGACGTTGGTCATGGATGAAGATGCACTGCCCCTTGAACAGCTGATTATCAAGCCGGTTCGGAATATTAAGTTTGAGGCTGGTGTCAAGGACTCCTCGACGTATGTGTCGACGCAGTTTCTTGTTGGTCTTATGTCGAACCCTGCTCTGGTTCAGAATGTGGCGCTGGTGGGGCACTTGCAGCATGGGAAGACGGTGTTTATGGATATGTTGGTGGAACAGACTCATCATATGTCTACTTTTGATGCAAATAGTGATAAGCACATGAGGTACACTGATACGAGGATTGATGAACAAGAGAGGAGGATATCTATTAAGGCTGTTCCCATGTCCCTTGTACTTGAGGATAGCAATTCAAAGTCGTACCTGTGCAATGTCATGGATACTCCTGGTCATGTCAATTTCTCTGCTGAAATGACTGCTTCACTTAGGCTCGCTGATGGTGCTGTCCTCATTGTTGATGCTGCAGAAGGGATGATGGGCTATATCCAAGAGCGCCTACCAATTGTGGTTGTAATCAACAAGGTTGACAGGTTGATAACAGAACTTAAATTGCCCCCAAGGGATGCTTACTTCAAGCTTAGGCATACTCTGGAAGTGATTAATAACCACATAACGGCTGCCTCTTCAACTGCTGGTCATGTACAAGTTATTGATCCTGTTGCTGGAAACGTATGCTTTGCAAGCGCTACAGCAGGATGGTCGTTCACGTTGCAATCATTTGCAAAGCTATATGTTAAGCTTCATGGGATCGCTTTTGACGCGGTTCAGTTTGCTTCTCGTCTATGGAGAGATATGTACTATCATCCTGAGGACAGGGCTTTCAGGAGAAAACCCCCTGCAAGTGGAGGAGAAAGGTCGTTTGTCCAGTTTGTGCTTGAACCCCTGTATAAAATTTATAGCCAGGTGATTGGAGAACATAAAAAGAGTGTTGAGGCAACTCTTGCTGAACTTGGTGTCACCCTTAGCAATGCAGCTTACAAATTGAATGTTAGGCCTCTACTGAGGTTGGCTTGTAGCTCGGTTTTTGGATCTGCCTCGGGCTTCTCTGATATGCTTGTGCAACATATTCCTTCTCCTAAAGATGCTGCAACAAGGAAAGTCGACCACACATATACTGGACCAAAAGACTCTTTGATTTACAAAGCCATGAAAACTTGTGATCCCAATGGCCCGTTGATGGTAAATGTTACCAAGCTGTATCCCAAGTCCGATTGTAGCGTACAGGACAGTCAGTGCGAGTATTGGGAGAAGGGTATTCACCTGACGATGAGGAGGACATGTGTCAAAGAAGTAACGAAGCTATGGCTTTACCAAGCGCGAGATAGGATACATATAGCTGAAGCTCCTCCTGGTACTTGGGTTCTCATCGAAGGTGTGGATGCTTCCATAATGAAAACTGCCACTCTGTGTAATGAGAGTTATGACGAGGATGTATACATATTCCGTCCTCTTCAGTTCAATACACTGCCAGTGGTGAAAACGGCAACTGAGCCTCTAAATCCCAGTGAGTTGCCAAAAATGGTGGAGGGTCTTAGAAAGATCAGCAAGAGTTATCCTCTTGCCATAACCAAAGTTGAGGAGTCTGGGGAGCACACAATCTTAGGTACAGGAGAACTGTACTTGGATTCCATCATGAAGGACCTCAGAGAGCTCTACTCTGAAGTAGAAGTCAAGGTTGCAGATCCTGTTGTTTCATTCTGCGAAACAGTTGTGGAATCTTCATCAATGAAGTGTTTTGCTGAAACACCAAACAAGAAGAATAAAATTACTATGATTGCAGAGCCATTAGAGAGAGGACTTGCGGAGGACATTGAGAAAGGTGTTGTAAGCATTGATTGGTCTAGGAGAGATATAGGTAATTTCTTCCAGACTGGGTATGAGTGGGATGTTCTTGCTGCACGGTCCATATGGGCATTCGGTCCTGATAAGCAGGGACCCAACATACTACTTGATGACACACTTTCAAGCGAAGTTGACAAGAGCTTGCTGAATGCTGTGAAAGACTCCATTGTGCAAGGGTTTCAGTGGGGTGCTCGAGAAGGACCTCTGTGTGATGAACCCATCAGAAATGTTAAGTTCAAGATTGTTGATGCAAGTATTGCACCTGAGCCATTGCATCGTGGATCTGGTCAAATCATTCCCACATCTCGACGTGTGGCCTATTCATCTTTCCTAATGGCAACCCCACGGCTCATGGAGCCAGTATATTATGTGGAGATACAAACGCCAATCGACTGTATATCTGCAATCTACACTGTTTTATCTCGCAGGCGTGGACATGTTACAGCCGATGTTCCTCAACCCGGGACCCCAGCTTACATCGTTAAGGCATTTTTACCCGTCATAGAATCGTTTGGTTTTGAGACGGACTTGAGGTACCATACTCAAGGACAGGCTTTTTGCCTCTCAGTCTTTGATCATTGGGCTATAGTTCCTGGGGATCCTCTTGACAAGAGTATTGTTCTGCCACCACTTGAACCCGCACCGATTCAGCACCTGGCTCGTGAATTTATGGTCAAGACAAGGCGTAGAAAGGGAATGAGCGAGGATGTGAGCATCAGCAAATTTTTTGATGAGGCCATGATGGTGGAACTGGCTCAGCAGGAAGCTGATATTCACCAGCAAATGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005730 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0007275 GO:0008150 GO:0009506 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0010154 GO:0015030 GO:0016020 GO:0016604 GO:0016607 GO:0022414 GO:0030054 GO:0030312 GO:0030532 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043900 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045694 GO:0046540 GO:0048316 GO:0048367 GO:0048437 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0070013 GO:0071007 GO:0071013 GO:0071944 GO:0090567 GO:0097525 GO:0097526 GO:0099402 GO:0120114 GO:1902494 GO:1990904 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

EFG_C EFG_IV EFTUD2 GTP_EFTU GTP_EFTU_D2

Protein Analysis

963

Amino Acids

107.9

Weight (kDa)

5.08

Isoelectric Point (pI)

40.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EFTUD2	PF16004	3 - 116	3.4e-33	116 kDa U5 small nuclear ribonucleoprotein component N-terminus
GTP_EFTU	PF00009	136 - 322	3.7e-33	Elongation factor Tu GTP binding domain
EFG_IV	PF03764	703 - 813	1.4e-18	Elongation factor G, domain IV
EFG_C	PF00679	816 - 904	3.5e-22	Elongation factor G C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06220 AT1G06220 AT1G06220 AT5G25230 AT5G25230
fragaria_vesca	FvH4_2g24581 FvH4_7g03790 FvH4_7g03790 FvH4_7g03790
malus_domestica	MD02G1013600.v1.1 MD15G1160400.v1.1
prunus_persica	Prupe.3G036300_v2.0.a1
pyrus_communis	pycom02g01260 pycom15g14420
rosa_chinensis	RchiOBHm_Chr1g0327101 RchiOBHm_Chr1g0327121 RchiOBHm_Chr2g0127751
rosa_laevigata	RLG00000012029 RLG00000012030 RLG00000030043
rosa_multiflora	Rmu_sc0000795.1_g000050 Rmu_sc0004240.1_g000007
rosa_roxburghii	Rroxscaffold_4G00323330 Rroxscaffold_6G00399840 Rroxscaffold_6G00400180
rosa_rugosa	Rorug01G0063500
rosa_samantha	Rh1AG080100 Rh1AG080300 Rh1AG080700 Rh1AG080900 Rh1BG064100 Rh1CG078700 Rh1CG078800 Rh1DG085100 Rh1DG085200 Rh2AG323400 Rh2BG332600 Rh2DG350900
rosa_wichuraiana	Rw1G006400 Rw2G026250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	361
Acc65I	GGTACC	1 cut(s)	2634
AccB1I	GGYRCC	1 cut(s)	2634
AccI	GTMKAC	4 cut(s)	365, 491, 1359, 1692
AccII	CGCG	2 cut(s)	1019, 1576
AciI	CCGC	5 cut(s)	122, 230, 1019, 2060, 2739
AclWI	GGATC	8 cut(s)	905, 1013, 1294, 1412, 1934, 2389, 2693, 2706
AcsI	RAATTY	3 cut(s)	1149, 2765, 2822
AcuI	CTGAAG	3 cut(s)	1617, 1694, 1938
AdeI	CACNNNGTG	1 cut(s)	1665
AfeI	AGCGCT	1 cut(s)	943
AfiI	CCNNNNNNNGG	6 cut(s)	403, 871, 920, 1100, 1435, 2561
AflIII	ACRYGT	3 cut(s)	1535, 2410, 2536
AjiI	CACGTC	1 cut(s)	2411
AjnI	CCWGG	7 cut(s)	60, 189, 643, 1158, 1606, 2692, 2754
Alw21I	GWGCWC	3 cut(s)	1851, 1911, 2293
Alw26I	GTCTC	2 cut(s)	251, 2615
AlwI	GGATC	8 cut(s)	905, 1013, 1294, 1412, 1934, 2389, 2693, 2706
AlwNI	CAGNNNCTG	2 cut(s)	1943, 2755
Ama87I	CYCGRG	3 cut(s)	1294, 2292, 2561
Aor51HI	AGCGCT	1 cut(s)	943
AoxI	GGCC	4 cut(s)	1250, 1426, 2415, 2835
ApeKI	GCWGC	7 cut(s)	125, 436, 719, 875, 1229, 1343, 2153
ApoI	RAATTY	3 cut(s)	1149, 2765, 2822
ArsI	GACNNNNNNTTYG	2 cut(s)	2640, 2672
AseI	ATTAAT	1 cut(s)	858
Asp718I	GGTACC	1 cut(s)	2634
AspLEI	GCGC	4 cut(s)	421, 753, 944, 1576
AspS9I	GGNCC	9 cut(s)	41, 1376, 1427, 1897, 2160, 2177, 2192, 2300, 2565
AsuC2I	CCSGG	2 cut(s)	2562, 2563
AsuHPI	GGTGA	7 cut(s)	146, 257, 1174, 1207, 1508, 1744, 2867
AvaI	CYCGRG	3 cut(s)	1294, 2292, 2561
AvaII	GGWCC	8 cut(s)	41, 1376, 1897, 2160, 2177, 2192, 2300, 2565
AxyI	CCTNAGG	1 cut(s)	1065
BaeGI	GKGCMC	1 cut(s)	432
BaeI	ACNNNNGTAYC	2 cut(s)	1602, 1635
BamHI	GGATCC	1 cut(s)	2698
BanI	GGYRCC	1 cut(s)	2634
BanII	GRGCYC	1 cut(s)	1911
BauI	CACGAG	1 cut(s)	2760
BbsI	GAAGAC	1 cut(s)	452
Bbv12I	GWGCWC	3 cut(s)	1851, 1911, 2293
BbvCI	CCTCAGC	1 cut(s)	204
BbvI	GCAGC	7 cut(s)	137, 448, 706, 862, 1241, 1330, 2140
BccI	CCATC	7 cut(s)	689, 727, 948, 1429, 1895, 2327, 2836
BceAI	ACGGC	3 cut(s)	888, 1755, 2462
BcgI	CGANNNNNNTGC	4 cut(s)	939, 973, 2741, 2775
BciT130I	CCWGG	7 cut(s)	62, 191, 645, 1160, 1608, 2694, 2756
BciVI	GTATCC	3 cut(s)	631, 1467, 1578
BclI	TGATCA	1 cut(s)	2674
BcnI	CCSGG	2 cut(s)	2562, 2563
BcoDI	GTCTC	2 cut(s)	251, 2615
BfaI	CTAG	1 cut(s)	2100
BfmI	CTRYAG	4 cut(s)	225, 720, 945, 2685
BfoI	RGCGCY	3 cut(s)	422, 754, 945
BfuI	GTATCC	3 cut(s)	631, 1467, 1578
BisI	GCNGC	8 cut(s)	123, 126, 437, 720, 876, 1230, 1344, 2154
BlpI	GCTNAGC	1 cut(s)	2856
BlsI	GCNGC	8 cut(s)	124, 127, 438, 721, 877, 1231, 1345, 2155
Bme1390I	CCNGG	9 cut(s)	62, 191, 645, 1160, 1608, 2562, 2563, 2694, 2756
Bme18I	GGWCC	8 cut(s)	41, 1376, 1897, 2160, 2177, 2192, 2300, 2565
BmeT110I	CYCGRG	3 cut(s)	1294, 2292, 2561
BmgBI	CACGTC	1 cut(s)	2411
BmgT120I	GGNCC	9 cut(s)	41, 1376, 1427, 1897, 2160, 2177, 2192, 2300, 2565
BmiI	GGNNCC	8 cut(s)	43, 2193, 2194, 2457, 2566, 2567, 2636, 2700
BmrFI	CCNGG	9 cut(s)	62, 191, 645, 1160, 1608, 2562, 2563, 2694, 2756
BmrI	ACTGGG	2 cut(s)	1755, 2139
BmuI	ACTGGG	2 cut(s)	1755, 2139
BoxI	GACNNNNGTC	2 cut(s)	263, 1538
BpiI	GAAGAC	1 cut(s)	452
BplI	GAGNNNNNCTC	4 cut(s)	1798, 1830, 1898, 1930
Bpu10I	CCTNAGC	4 cut(s)	204, 836, 1220, 2364
Bpu1102I	GCTNAGC	1 cut(s)	2856
BpuEI	CTTGAG	3 cut(s)	617, 2628, 2650
BpuMI	CCSGG	2 cut(s)	2562, 2563
BsaJI	CCNNGG	5 cut(s)	815, 1293, 2444, 2561, 2693
BsaXI	ACNNNNNCTCC	4 cut(s)	224, 254, 1522, 1552
Bsc4I	CCNNNNNNNGG	6 cut(s)	403, 871, 920, 1100, 1435, 2561
Bse118I	RCCGGY	1 cut(s)	310
Bse1I	ACTGG	7 cut(s)	1123, 1378, 1727, 1761, 2134, 2459, 2856
Bse21I	CCTNAGG	1 cut(s)	1065
Bse3DI	GCAATG	3 cut(s)	634, 1231, 2369
BseBI	CCWGG	7 cut(s)	62, 191, 645, 1160, 1608, 2694, 2756
BseDI	CCNNGG	5 cut(s)	815, 1293, 2444, 2561, 2693
BseLI	CCNNNNNNNGG	6 cut(s)	403, 871, 920, 1100, 1435, 2561
BseMI	GCAATG	3 cut(s)	634, 1231, 2369
BseMII	CTCAG	9 cut(s)	158, 195, 1056, 1250, 1737, 1915, 2355, 2679, 2870
BseNI	ACTGG	7 cut(s)	1123, 1378, 1727, 1761, 2134, 2459, 2856
BseRI	GAGGAG	8 cut(s)	104, 248, 340, 571, 1119, 1543, 1593, 1850
BseSI	GKGCMC	1 cut(s)	432
BseXI	GCAGC	7 cut(s)	137, 448, 706, 862, 1241, 1330, 2140
BseYI	CCCAGC	1 cut(s)	2569
BsgI	GTGCAG	1 cut(s)	2139
Bsh1236I	CGCG	2 cut(s)	1019, 1576
BshFI	GGCC	4 cut(s)	1252, 1428, 2417, 2837
BshNI	GGYRCC	1 cut(s)	2634
BsiHKAI	GWGCWC	3 cut(s)	1851, 1911, 2293
BsiHKCI	CYCGRG	3 cut(s)	1294, 2292, 2561
BsiSI	CCGG	2 cut(s)	311, 2562
BslFI	GGGAC	3 cut(s)	571, 2205, 2578
BslI	CCNNNNNNNGG	6 cut(s)	403, 871, 920, 1100, 1435, 2561
BsmAI	GTCTC	2 cut(s)	251, 2615
BsmBI	CGTCTC	2 cut(s)	251, 2615
BsmFI	GGGAC	3 cut(s)	571, 2205, 2578
BsmI	GAATGC	2 cut(s)	2171, 2254
BsnI	GGCC	4 cut(s)	1252, 1428, 2417, 2837
BsoBI	CYCGRG	3 cut(s)	1294, 2292, 2561
Bsp1286I	GDGCHC	4 cut(s)	432, 1851, 1911, 2293
Bsp1407I	TGTACA	1 cut(s)	898
Bsp143I	GATC	9 cut(s)	910, 1005, 1286, 1417, 1797, 1939, 2381, 2674, 2698
Bsp1720I	GCTNAGC	1 cut(s)	2856
BspACI	CCGC	5 cut(s)	122, 230, 1019, 2060, 2739
BspANI	GGCC	4 cut(s)	1252, 1428, 2417, 2837
BspCNI	CTCAG	9 cut(s)	157, 196, 1057, 1251, 1738, 1914, 2356, 2678, 2869
BspFNI	CGCG	2 cut(s)	1019, 1576
BspHI	TCATGA	1 cut(s)	1890
BspLI	GGNNCC	8 cut(s)	43, 2193, 2194, 2457, 2566, 2567, 2636, 2700
BspMAI	CTGCAG	1 cut(s)	724
BspPI	GGATC	8 cut(s)	905, 1013, 1294, 1412, 1934, 2389, 2693, 2706
BspT107I	GGYRCC	1 cut(s)	2634
BsrDI	GCAATG	3 cut(s)	634, 1231, 2369
BsrFI	RCCGGY	1 cut(s)	310
BsrGI	TGTACA	1 cut(s)	898
BsrI	ACTGG	7 cut(s)	1123, 1378, 1727, 1761, 2134, 2459, 2856
BssAI	RCCGGY	1 cut(s)	310
BssECI	CCNNGG	5 cut(s)	815, 1293, 2444, 2561, 2693
BssMI	GATC	9 cut(s)	910, 1005, 1286, 1417, 1797, 1939, 2381, 2674, 2698
BssNAI	GTATAC	1 cut(s)	1693
BssSI	CACGAG	1 cut(s)	2760
BssT1I	CCWWGG	1 cut(s)	815
Bst1107I	GTATAC	1 cut(s)	1693
Bst2BI	CACGAG	1 cut(s)	2760
Bst2UI	CCWGG	7 cut(s)	62, 191, 645, 1160, 1608, 2694, 2756
Bst4CI	ACNGT	8 cut(s)	245, 451, 1487, 1875, 1966, 2160, 2495, 2515
Bst6I	CTCTTC	2 cut(s)	886, 1713
BstAPI	GCANNNNNTGC	2 cut(s)	1199, 2357
BstAUI	TGTACA	1 cut(s)	898
BstC8I	GCNNGC	4 cut(s)	690, 940, 2243, 2528
BstDSI	CCRYGG	1 cut(s)	2444
BstFNI	CGCG	2 cut(s)	1019, 1576
BstH2I	RGCGCY	3 cut(s)	422, 754, 945
BstHHI	GCGC	4 cut(s)	421, 753, 944, 1576
BstKTI	GATC	9 cut(s)	913, 1008, 1289, 1420, 1800, 1942, 2384, 2677, 2701
BstMAI	GTCTC	2 cut(s)	251, 2615
BstMBI	GATC	9 cut(s)	910, 1005, 1286, 1417, 1797, 1939, 2381, 2674, 2698
BstMWI	GCNNNNNNNGC	8 cut(s)	427, 436, 698, 939, 1016, 1199, 2357, 2455
BstNI	CCWGG	7 cut(s)	62, 191, 645, 1160, 1608, 2694, 2756
BstNSI	RCATGY	2 cut(s)	1539, 2540
BstPAI	GACNNNNGTC	2 cut(s)	263, 1538
BstSCI	CCNGG	9 cut(s)	60, 189, 643, 1158, 1606, 2560, 2561, 2692, 2754
BstSFI	CTRYAG	4 cut(s)	225, 720, 945, 2685
BstSLI	GKGCMC	1 cut(s)	432
BstUI	CGCG	2 cut(s)	1019, 1576
BstV1I	GCAGC	7 cut(s)	137, 448, 706, 862, 1241, 1330, 2140
BstV2I	GAAGAC	1 cut(s)	452
BstX2I	RGATCY	4 cut(s)	1286, 1939, 2381, 2698
BstXI	CCANNNNNNTGG	2 cut(s)	1166, 2845
BstYI	RGATCY	4 cut(s)	1286, 1939, 2381, 2698
BstZ17I	GTATAC	1 cut(s)	1693
Bsu36I	CCTNAGG	1 cut(s)	1065
BsuI	GTATCC	3 cut(s)	631, 1467, 1578
BsuRI	GGCC	4 cut(s)	1252, 1428, 2417, 2837
BtgI	CCRYGG	1 cut(s)	2444
BtrI	CACGTC	1 cut(s)	2411
BtsI	GCAGTG	2 cut(s)	281, 1721
BtsIMutI	CAGTG	8 cut(s)	281, 528, 1496, 1721, 1734, 1768, 2288, 2511
Cac8I	GCNNGC	4 cut(s)	690, 940, 2243, 2528
CaiI	CAGNNNCTG	2 cut(s)	1943, 2755
CciI	TCATGA	1 cut(s)	1890
CfoI	GCGC	4 cut(s)	421, 753, 944, 1576
Cfr10I	RCCGGY	1 cut(s)	310
Cfr13I	GGNCC	9 cut(s)	41, 1376, 1427, 1897, 2160, 2177, 2192, 2300, 2565
Cfr9I	CCCGGG	1 cut(s)	2561
CseI	GACGC	2 cut(s)	376, 1025
CsiI	ACCWGGT	1 cut(s)	189
CspCI	CAANNNNNGTGG	2 cut(s)	1761, 1796
DpnI	GATC	9 cut(s)	912, 1007, 1288, 1419, 1799, 1941, 2383, 2676, 2700
DpnII	GATC	9 cut(s)	910, 1005, 1286, 1417, 1797, 1939, 2381, 2674, 2698
DraIII	CACNNNGTG	1 cut(s)	1665
DrdI	GACNNNNNNGTC	1 cut(s)	361
DseDI	GACNNNNNNGTC	1 cut(s)	361
Eam1104I	CTCTTC	2 cut(s)	886, 1713
EarI	CTCTTC	2 cut(s)	886, 1713
Ecl136II	GAGCTC	1 cut(s)	1909
Eco130I	CCWWGG	1 cut(s)	815
Eco147I	AGGCCT	1 cut(s)	1252
Eco24I	GRGCYC	1 cut(s)	1911
Eco32I	GATATC	1 cut(s)	564
Eco47I	GGWCC	8 cut(s)	41, 1376, 1897, 2160, 2177, 2192, 2300, 2565
Eco47III	AGCGCT	1 cut(s)	943
Eco53kI	GAGCTC	1 cut(s)	1909
Eco57I	CTGAAG	3 cut(s)	1617, 1694, 1938
Eco81I	CCTNAGG	1 cut(s)	1065
Eco88I	CYCGRG	3 cut(s)	1294, 2292, 2561
EcoICRI	GAGCTC	1 cut(s)	1909
EcoO109I	RGGNCCY	5 cut(s)	41, 1897, 2192, 2300, 2565
EcoRII	CCWGG	7 cut(s)	60, 189, 643, 1158, 1606, 2692, 2754
EcoRV	GATATC	1 cut(s)	564
EcoT14I	CCWWGG	1 cut(s)	815
EcoT38I	GRGCYC	1 cut(s)	1911
ErhI	CCWWGG	1 cut(s)	815
Esp3I	CGTCTC	2 cut(s)	251, 2615
FalI	AAGNNNNNCTT	2 cut(s)	808, 840
FaqI	GGGAC	3 cut(s)	571, 2205, 2578
FauI	CCCGC	1 cut(s)	2746
FauNDI	CATATG	2 cut(s)	486, 2165
FbaI	TGATCA	1 cut(s)	2674
FblI	GTMKAC	4 cut(s)	365, 491, 1359, 1692
Fnu4HI	GCNGC	8 cut(s)	123, 126, 437, 720, 876, 1230, 1344, 2154
FriOI	GRGCYC	1 cut(s)	1911
Fsp4HI	GCNGC	8 cut(s)	123, 126, 437, 720, 876, 1230, 1344, 2154
FspBI	CTAG	1 cut(s)	2100
GlaI	GCGC	4 cut(s)	420, 752, 943, 1575
GluI	GCNGC	8 cut(s)	123, 126, 437, 720, 876, 1230, 1344, 2154
GsaI	CCCAGC	1 cut(s)	2573
HaeII	RGCGCY	3 cut(s)	422, 754, 945
HaeIII	GGCC	4 cut(s)	1252, 1428, 2417, 2837
HapII	CCGG	2 cut(s)	311, 2562
HgaI	GACGC	2 cut(s)	376, 1025
HhaI	GCGC	4 cut(s)	421, 753, 944, 1576
Hin6I	GCGC	4 cut(s)	419, 751, 942, 1574
HinP1I	GCGC	4 cut(s)	419, 751, 942, 1574
HincII	GTYRAC	4 cut(s)	366, 784, 1360, 2233
HindII	GTYRAC	4 cut(s)	366, 784, 1360, 2233
HindIII	AAGCTT	2 cut(s)	833, 995
HpaII	CCGG	2 cut(s)	311, 2562
HphI	GGTGA	7 cut(s)	146, 257, 1174, 1207, 1508, 1744, 2867
Hpy188I	TCNGA	9 cut(s)	58, 147, 318, 411, 1306, 1468, 1904, 1918, 2324
Hpy99I	CGWCG	4 cut(s)	23, 358, 370, 2412
HpyAV	CCTTC	6 cut(s)	719, 1338, 1501, 1622, 1888, 2291
HpyCH4III	ACNGT	8 cut(s)	245, 451, 1487, 1875, 1966, 2160, 2495, 2515
HpyCH4IV	ACGT	5 cut(s)	260, 356, 927, 965, 2410
HpyF10VI	GCNNNNNNNGC	8 cut(s)	427, 436, 698, 939, 1016, 1199, 2357, 2455
HpySE526I	ACGT	5 cut(s)	260, 356, 927, 965, 2410
HspAI	GCGC	4 cut(s)	419, 751, 942, 1574
KflI	GGGWCCC	2 cut(s)	2192, 2565
KpnI	GGTACC	1 cut(s)	2638
Ksp22I	TGATCA	1 cut(s)	2674
Kzo9I	GATC	9 cut(s)	910, 1005, 1286, 1417, 1797, 1939, 2381, 2674, 2698
LmnI	GCTCC	4 cut(s)	91, 1606, 1846, 2455
Lsp1109I	GCAGC	7 cut(s)	137, 448, 706, 862, 1241, 1330, 2140
MabI	ACCWGGT	1 cut(s)	189
MaeI	CTAG	1 cut(s)	2100
MaeII	ACGT	5 cut(s)	260, 356, 927, 965, 2410
MaeIII	GTNAC	4 cut(s)	1213, 1444, 1549, 2539
MalI	GATC	9 cut(s)	912, 1007, 1288, 1419, 1799, 1941, 2383, 2676, 2700
MboI	GATC	9 cut(s)	910, 1005, 1286, 1417, 1797, 1939, 2381, 2674, 2698
MfeI	CAATTG	1 cut(s)	759
MflI	RGATCY	4 cut(s)	1286, 1939, 2381, 2698
MhlI	GDGCHC	4 cut(s)	432, 1851, 1911, 2293
MlyI	GAGTC	6 cut(s)	62, 341, 472, 1379, 1847, 2255
MseI	TTAA	7 cut(s)	324, 570, 804, 858, 993, 2331, 2583
MslI	CAYNNNNRTG	1 cut(s)	2843
MspA1I	CMGCKG	3 cut(s)	128, 230, 298
MspI	CCGG	2 cut(s)	311, 2562
MspR9I	CCNGG	9 cut(s)	62, 191, 645, 1160, 1608, 2562, 2563, 2694, 2756
MunI	CAATTG	1 cut(s)	759
Mva1269I	GAATGC	2 cut(s)	2171, 2254
MvaI	CCWGG	7 cut(s)	62, 191, 645, 1160, 1608, 2694, 2756
MvnI	CGCG	2 cut(s)	1019, 1576
MwoI	GCNNNNNNNGC	8 cut(s)	427, 436, 698, 939, 1016, 1199, 2357, 2455
NciI	CCSGG	2 cut(s)	2562, 2563
NdeI	CATATG	2 cut(s)	486, 2165
NdeII	GATC	9 cut(s)	910, 1005, 1286, 1417, 1797, 1939, 2381, 2674, 2698
NlaIV	GGNNCC	8 cut(s)	43, 2193, 2194, 2457, 2566, 2567, 2636, 2700
NmuCI	GTSAC	1 cut(s)	1213
NspI	RCATGY	2 cut(s)	1539, 2540
PaeR7I	CTCGAG	1 cut(s)	2292
PagI	TCATGA	1 cut(s)	1890
PceI	AGGCCT	1 cut(s)	1252
PciI	ACATGT	2 cut(s)	1535, 2536
PcsI	WCGNNNNNNNCGW	1 cut(s)	362
PctI	GAATGC	2 cut(s)	2171, 2254
PfeI	GAWTC	4 cut(s)	1883, 1973, 2606, 2746
PkrI	GCNGC	8 cut(s)	124, 127, 438, 721, 877, 1231, 1345, 2155
PleI	GAGTC	6 cut(s)	61, 341, 472, 1379, 1846, 2255
PpsI	GAGTC	6 cut(s)	61, 341, 472, 1379, 1846, 2255
PpuMI	RGGWCCY	5 cut(s)	41, 1897, 2192, 2300, 2565
PscI	ACATGT	2 cut(s)	1535, 2536
PshAI	GACNNNNGTC	2 cut(s)	263, 1538
PshBI	ATTAAT	1 cut(s)	858
Psp124BI	GAGCTC	1 cut(s)	1911
Psp5II	RGGWCCY	5 cut(s)	41, 1897, 2192, 2300, 2565
Psp6I	CCWGG	7 cut(s)	60, 189, 643, 1158, 1606, 2692, 2754
PspFI	CCCAGC	1 cut(s)	2569
PspGI	CCWGG	7 cut(s)	60, 189, 643, 1158, 1606, 2692, 2754
PspN4I	GGNNCC	8 cut(s)	43, 2193, 2194, 2457, 2566, 2567, 2636, 2700
PspPI	GGNCC	9 cut(s)	41, 1376, 1427, 1897, 2160, 2177, 2192, 2300, 2565
PspPPI	RGGWCCY	5 cut(s)	41, 1897, 2192, 2300, 2565
PstI	CTGCAG	1 cut(s)	724
PstNI	CAGNNNCTG	2 cut(s)	1943, 2755
PsuI	RGATCY	4 cut(s)	1286, 1939, 2381, 2698
PvuII	CAGCTG	2 cut(s)	128, 298
RseI	CAYNNNNRTG	1 cut(s)	2843
SacI	GAGCTC	1 cut(s)	1911
SalI	GTCGAC	2 cut(s)	364, 1358
SaqAI	TTAA	7 cut(s)	324, 570, 804, 858, 993, 2331, 2583
SatI	GCNGC	8 cut(s)	123, 126, 437, 720, 876, 1230, 1344, 2154
Sau3AI	GATC	9 cut(s)	910, 1005, 1286, 1417, 1797, 1939, 2381, 2674, 2698
Sau96I	GGNCC	9 cut(s)	41, 1376, 1427, 1897, 2160, 2177, 2192, 2300, 2565
SchI	GAGTC	6 cut(s)	62, 341, 472, 1379, 1847, 2255
ScrFI	CCNGG	9 cut(s)	62, 191, 645, 1160, 1608, 2562, 2563, 2694, 2756
SduI	GDGCHC	4 cut(s)	432, 1851, 1911, 2293
SexAI	ACCWGGT	1 cut(s)	189
SfcI	CTRYAG	4 cut(s)	225, 720, 945, 2685
Sfr274I	CTCGAG	1 cut(s)	2292
SinI	GGWCC	8 cut(s)	41, 1376, 1897, 2160, 2177, 2192, 2300, 2565
SlaI	CTCGAG	1 cut(s)	2292
SmaI	CCCGGG	1 cut(s)	2563
SmiMI	CAYNNNNRTG	1 cut(s)	2843
SmlI	CTYRAG	4 cut(s)	596, 2292, 2629, 2643
SmoI	CTYRAG	4 cut(s)	596, 2292, 2629, 2643
SseBI	AGGCCT	1 cut(s)	1252
SsiI	CCGC	5 cut(s)	122, 230, 1019, 2060, 2739
SspI	AATATT	1 cut(s)	322
SspMI	CTAG	1 cut(s)	2100
SstI	GAGCTC	1 cut(s)	1911
StuI	AGGCCT	1 cut(s)	1252
StyD4I	CCNGG	9 cut(s)	60, 189, 643, 1158, 1606, 2560, 2561, 2692, 2754
StyI	CCWWGG	1 cut(s)	815
TaaI	ACNGT	8 cut(s)	245, 451, 1487, 1875, 1966, 2160, 2495, 2515
TaiI	ACGT	5 cut(s)	263, 359, 930, 968, 2413
TaqII	GACCGA	1 cut(s)	2165
TatI	WGTACW	4 cut(s)	592, 898, 1053, 1875
TauI	GCSGC	1 cut(s)	125
TfiI	GAWTC	4 cut(s)	1883, 1973, 2606, 2746
Tru1I	TTAA	7 cut(s)	324, 570, 804, 858, 993, 2331, 2583
Tru9I	TTAA	7 cut(s)	324, 570, 804, 858, 993, 2331, 2583
TscAI	CASTG	8 cut(s)	288, 535, 1496, 1728, 1734, 1768, 2288, 2518
TseFI	GTSAC	1 cut(s)	1213
TseI	GCWGC	7 cut(s)	125, 436, 719, 875, 1229, 1343, 2153
Tsp45I	GTSAC	1 cut(s)	1213
TspGWI	ACGGA	2 cut(s)	1691, 2639
TspMI	CCCGGG	1 cut(s)	2561
TspRI	CASTG	8 cut(s)	288, 535, 1496, 1728, 1734, 1768, 2288, 2518
VpaK11BI	GGWCC	8 cut(s)	41, 1376, 1897, 2160, 2177, 2192, 2300, 2565
VspI	ATTAAT	1 cut(s)	858
XapI	RAATTY	3 cut(s)	1149, 2765, 2822
XceI	RCATGY	2 cut(s)	1539, 2540
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1370
XhoI	CTCGAG	1 cut(s)	2292
XmaI	CCCGGG	1 cut(s)	2561
XmiI	GTMKAC	4 cut(s)	365, 491, 1359, 1692
XspI	CTAG	1 cut(s)	2100

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.