Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0002643

Physical Location & Seq

Genomic Coordinates Forward (+)

54025438 .. 54053424

Gene Structure 27987 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00323330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGGATGATAGTCTATACGACGAGTTCGGGAACTATATAGGACCCGAAATCGAGTCTGGCCAGGAGAGTGATAGGGAGGAAGAAGATGAGGAGCTTCCGGATAGGGTAGAAGATAGAGGTGCGGCGTCCGACGGTGAGGATGCTCCGAATGGGTGGCTGACTGCCTCTAATGATGTAGATATGGACAACCAGGTTGTTCTTGCTGAGGATAAGAAGTATTATCCTACAGCGGAGGAGGTGTACGGCGAAGATGTCGAGACGTTGGTCATGGATGAAGATGCACAGCCCCTTGAACAGCCGATTATCAAGCCGGTTCGGAATATTAAGTTTGAGGTTGGTGTCAAGGACTCCTCGACGTATGTGTCGACACAGTTTCTTGTTGGTCTTATGTCGAACCCTGCTCTGGTTCGGAATGTGGCGCTGGTGGGGCACTTGCAGCATGGGAAGACGGTGTTTATGGATATGTTGGTGGAACAGACTCATCATATGTCTACTTTTGATGCAAATAGTGATAAGCACATGAGGTACACTGATACAAGGATTGATGAACAAGAGAGGAGGATATCTATTAAGGCTGTTCCCATGTCCCTTGTACTTGAGGATAGCAATTCAAAGTCGTACCTGTGCAATGTCATGGATACTCCTGGTCATGTCAATTTCTCTGATGAAATGACTGCTTCACTTAGGCTCGCTGATGGTGCTGTCCTCATTGTTGATGCTGCAGAAGGGATGATGGTAAATACTGAGAGGGCTATACGCCATGCAATCCAAGAGCGCCTACCAATTGTGGTTGTAATCAACAAGGTTGACAGGTTGATAACAGAACTTAAATTGCCCCCAAGGGATGCTTACTTCAAGCTTAGGCATACTCTGGAAGTGATTAATAACCACATAACGGCTGCCTCTTCAACTGCTGGTCATGTACAAGTTATTGATCCTGTTGCTGGAAATGTATGCTTTGCAAGCGCTACTGCAGGATGGTCGTTCACGTTGCAATCATTTGCGAAGCTATATGTAAAGCTTCATGGGATCGCTTTTGACGCGGATCAGTTTGCTTCTCGTCTATGGGGAGATATGTACTATCATCCTGAGGACAGGGCTTTTAGGAGAAAACCCCCTGCAAGTGGAGGAGAAAGGTCGTTTGTCCAGTTTGTGCTTGAACCCCTGTATAAAATTTATAGCCAGGTGATTGGAGAACATAAAAAGAGTGTTGAGGCAACTCTTGCTGAACTTGGTGTCACCCTTAGCAATGCAGCTTGCAAATTGAATGTTAGGCCTCTACTGAGGTTGGCTTGTAGCTCGGTTTTTGGATCTGCCTCGGGCTTCACTGATATGCTTGTGCAACATATTCCTTCTCCTAAAGATGCTGCAACAAGGAAAGTCGACCACACATATACTGGACCAAAAGACTCTTTGATTTACAAAGCCATGAAAACTTGTGATCCCAATGGCCCGTTGATGGTAAATGTTACCAAGCTGTATCCCAAGTCCGATTGCAGCGTGTTCGATAATACAGTGGCAAGATTCAGACAGGACAGTCAGTACGAGTATTGGGAGAAGGGTATTCACCTGACGATGAGGAGGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005730 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0007275 GO:0008150 GO:0009506 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0010154 GO:0015030 GO:0016020 GO:0016604 GO:0016607 GO:0022414 GO:0030054 GO:0030312 GO:0030532 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043900 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045694 GO:0046540 GO:0048316 GO:0048367 GO:0048437 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0070013 GO:0071007 GO:0071013 GO:0071944 GO:0090567 GO:0097525 GO:0097526 GO:0099402 GO:0120114 GO:1902494 GO:1990904 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

EFG_C EFG_IV EFTUD2 GTP_EFTU GTP_EFTU_D2

Protein Analysis

529

Amino Acids

59.22

Weight (kDa)

5.11

Isoelectric Point (pI)

38.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EFTUD2	PF16004	3 - 116	8.8e-36	116 kDa U5 small nuclear ribonucleoprotein component N-terminus
GTP_EFTU	PF00009	136 - 330	1.9e-42	Elongation factor Tu GTP binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06220 AT1G06220 AT1G06220 AT5G25230 AT5G25230
fragaria_vesca	FvH4_2g24581 FvH4_7g03790 FvH4_7g03790 FvH4_7g03790
malus_domestica	MD02G1013600.v1.1 MD15G1160400.v1.1
prunus_persica	Prupe.3G036300_v2.0.a1
pyrus_communis	pycom02g01260 pycom15g14420
rosa_chinensis	RchiOBHm_Chr1g0327101 RchiOBHm_Chr1g0327121 RchiOBHm_Chr2g0127751
rosa_laevigata	RLG00000012029 RLG00000012030 RLG00000030043
rosa_multiflora	Rmu_sc0000795.1_g000050 Rmu_sc0004240.1_g000007
rosa_roxburghii	Rroxscaffold_4G00323330 Rroxscaffold_6G00399840 Rroxscaffold_6G00400180
rosa_rugosa	Rorug01G0063500
rosa_samantha	Rh1AG080100 Rh1AG080300 Rh1AG080700 Rh1AG080900 Rh1BG064100 Rh1CG078700 Rh1CG078800 Rh1DG085100 Rh1DG085200 Rh2AG323400 Rh2BG332600 Rh2DG350900
rosa_wichuraiana	Rw1G006400 Rw2G026250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	361, 1536
AccI	GTMKAC	3 cut(s)	365, 491, 1383
AccII	CGCG	1 cut(s)	1043
AccIII	TCCGGA	1 cut(s)	97
AciI	CCGC	3 cut(s)	122, 230, 1043
AclWI	GGATC	5 cut(s)	929, 1037, 1053, 1318, 1436
AcoI	YGGCCR	1 cut(s)	58
AcsI	RAATTY	1 cut(s)	1173
AcyI	GRCGYC	1 cut(s)	125
AfaI	GTAC	7 cut(s)	242, 527, 594, 620, 924, 1079, 1544
AfeI	AGCGCT	1 cut(s)	967
AfiI	CCNNNNNNNGG	5 cut(s)	403, 895, 944, 1124, 1459
AgsI	TTSAA	6 cut(s)	293, 612, 856, 909, 1160, 1267
AjnI	CCWGG	4 cut(s)	60, 189, 643, 1182
AluBI	AGCT	7 cut(s)	94, 859, 1009, 1021, 1256, 1299, 1477
AluI	AGCT	7 cut(s)	94, 859, 1009, 1021, 1256, 1299, 1477
Alw26I	GTCTC	1 cut(s)	251
AlwI	GGATC	5 cut(s)	929, 1037, 1053, 1318, 1436
Ama87I	CYCGRG	1 cut(s)	1318
Aor13HI	TCCGGA	1 cut(s)	97
Aor51HI	AGCGCT	1 cut(s)	967
AoxI	GGCC	3 cut(s)	58, 1274, 1450
ApeKI	GCWGC	6 cut(s)	436, 719, 899, 1253, 1367, 1497
ApoI	RAATTY	1 cut(s)	1173
AseI	ATTAAT	1 cut(s)	882
AspLEI	GCGC	3 cut(s)	421, 777, 968
AspS9I	GGNCC	3 cut(s)	41, 1400, 1451
AsuHPI	GGTGA	4 cut(s)	146, 1198, 1231, 1559
AvaI	CYCGRG	1 cut(s)	1318
AvaII	GGWCC	2 cut(s)	41, 1400
AxyI	CCTNAGG	1 cut(s)	1089
BaeGI	GKGCMC	1 cut(s)	432
BalI	TGGCCA	1 cut(s)	60
BbsI	GAAGAC	1 cut(s)	452
BbvCI	CCTCAGC	1 cut(s)	204
BbvI	GCAGC	6 cut(s)	448, 706, 886, 1265, 1354, 1509
BccI	CCATC	4 cut(s)	689, 727, 972, 1453
BceAI	ACGGC	2 cut(s)	259, 912
BcgI	CGANNNNNNTGC	4 cut(s)	963, 997, 1486, 1520
BciT130I	CCWGG	4 cut(s)	62, 191, 645, 1184
BciVI	GTATCC	2 cut(s)	631, 1491
BcoDI	GTCTC	1 cut(s)	251
BfmI	CTRYAG	3 cut(s)	225, 720, 972
BfoI	RGCGCY	3 cut(s)	422, 778, 969
BfuI	GTATCC	2 cut(s)	631, 1491
BisI	GCNGC	7 cut(s)	123, 437, 720, 900, 1254, 1368, 1498
BlsI	GCNGC	7 cut(s)	124, 438, 721, 901, 1255, 1369, 1499
Bme1390I	CCNGG	4 cut(s)	62, 191, 645, 1184
Bme18I	GGWCC	2 cut(s)	41, 1400
BmeT110I	CYCGRG	1 cut(s)	1318
BmgT120I	GGNCC	3 cut(s)	41, 1400, 1451
BmiI	GGNNCC	1 cut(s)	43
BmrFI	CCNGG	4 cut(s)	62, 191, 645, 1184
BmsI	GCATC	6 cut(s)	130, 268, 490, 706, 835, 1354
BoxI	GACNNNNGTC	1 cut(s)	263
BpiI	GAAGAC	1 cut(s)	452
Bpu10I	CCTNAGC	3 cut(s)	204, 860, 1244
BpuEI	CTTGAG	1 cut(s)	617
BsaHI	GRCGYC	1 cut(s)	125
BsaJI	CCNNGG	2 cut(s)	839, 1317
BsaWI	WCCGGW	1 cut(s)	97
BsaXI	ACNNNNNCTCC	2 cut(s)	224, 254
Bsc4I	CCNNNNNNNGG	5 cut(s)	403, 895, 944, 1124, 1459
Bse118I	RCCGGY	1 cut(s)	310
Bse1I	ACTGG	2 cut(s)	1147, 1402
Bse21I	CCTNAGG	1 cut(s)	1089
Bse3DI	GCAATG	2 cut(s)	634, 1255
BseAI	TCCGGA	1 cut(s)	97
BseBI	CCWGG	4 cut(s)	62, 191, 645, 1184
BseDI	CCNNGG	2 cut(s)	839, 1317
BseGI	GGATG	7 cut(s)	10, 145, 277, 735, 850, 983, 1084
BseLI	CCNNNNNNNGG	5 cut(s)	403, 895, 944, 1124, 1459
BseMI	GCAATG	2 cut(s)	634, 1255
BseMII	CTCAG	4 cut(s)	195, 735, 1080, 1274
BseNI	ACTGG	2 cut(s)	1147, 1402
BseRI	GAGGAG	5 cut(s)	104, 248, 340, 571, 1143
BseSI	GKGCMC	1 cut(s)	432
BseXI	GCAGC	6 cut(s)	448, 706, 886, 1265, 1354, 1509
Bsh1236I	CGCG	1 cut(s)	1043
BshFI	GGCC	3 cut(s)	60, 1276, 1452
BsiHKCI	CYCGRG	1 cut(s)	1318
BsiSI	CCGG	2 cut(s)	98, 311
BslFI	GGGAC	1 cut(s)	571
BslI	CCNNNNNNNGG	5 cut(s)	403, 895, 944, 1124, 1459
BsmAI	GTCTC	1 cut(s)	251
BsmBI	CGTCTC	1 cut(s)	251
BsmFI	GGGAC	1 cut(s)	571
BsnI	GGCC	3 cut(s)	60, 1276, 1452
BsoBI	CYCGRG	1 cut(s)	1318
Bsp1286I	GDGCHC	1 cut(s)	432
Bsp13I	TCCGGA	1 cut(s)	97
Bsp1407I	TGTACA	1 cut(s)	922
Bsp143I	GATC	5 cut(s)	934, 1029, 1045, 1310, 1441
BspACI	CCGC	3 cut(s)	122, 230, 1043
BspANI	GGCC	3 cut(s)	60, 1276, 1452
BspCNI	CTCAG	4 cut(s)	196, 736, 1081, 1275
BspEI	TCCGGA	1 cut(s)	97
BspFNI	CGCG	1 cut(s)	1043
BspLI	GGNNCC	1 cut(s)	43
BspMAI	CTGCAG	2 cut(s)	724, 976
BspPI	GGATC	5 cut(s)	929, 1037, 1053, 1318, 1436
BsrDI	GCAATG	2 cut(s)	634, 1255
BsrFI	RCCGGY	1 cut(s)	310
BsrGI	TGTACA	1 cut(s)	922
BsrI	ACTGG	2 cut(s)	1147, 1402
BssAI	RCCGGY	1 cut(s)	310
BssECI	CCNNGG	2 cut(s)	839, 1317
BssMI	GATC	5 cut(s)	934, 1029, 1045, 1310, 1441
BssNI	GRCGYC	1 cut(s)	125
BssT1I	CCWWGG	1 cut(s)	839
Bst2UI	CCWGG	4 cut(s)	62, 191, 645, 1184
Bst4CI	ACNGT	5 cut(s)	134, 372, 451, 1516, 1538
Bst6I	CTCTTC	1 cut(s)	910
BstACI	GRCGYC	1 cut(s)	125
BstAPI	GCANNNNNTGC	1 cut(s)	1223
BstAUI	TGTACA	1 cut(s)	922
BstC8I	GCNNGC	3 cut(s)	690, 964, 1258
BstDEI	CTNAG	7 cut(s)	204, 683, 744, 860, 1089, 1244, 1283
BstF5I	GGATG	7 cut(s)	10, 145, 277, 735, 850, 983, 1084
BstFNI	CGCG	1 cut(s)	1043
BstH2I	RGCGCY	3 cut(s)	422, 778, 969
BstHHI	GCGC	3 cut(s)	421, 777, 968
BstKTI	GATC	5 cut(s)	937, 1032, 1048, 1313, 1444
BstMAI	GTCTC	1 cut(s)	251
BstMBI	GATC	5 cut(s)	934, 1029, 1045, 1310, 1441
BstMWI	GCNNNNNNNGC	6 cut(s)	427, 436, 698, 963, 1040, 1223
BstNI	CCWGG	4 cut(s)	62, 191, 645, 1184
BstPAI	GACNNNNGTC	1 cut(s)	263
BstSCI	CCNGG	4 cut(s)	60, 189, 643, 1182
BstSFI	CTRYAG	3 cut(s)	225, 720, 972
BstSLI	GKGCMC	1 cut(s)	432
BstUI	CGCG	1 cut(s)	1043
BstV1I	GCAGC	6 cut(s)	448, 706, 886, 1265, 1354, 1509
BstV2I	GAAGAC	1 cut(s)	452
BstX2I	RGATCY	1 cut(s)	1310
BstXI	CCANNNNNNTGG	1 cut(s)	1190
BstYI	RGATCY	1 cut(s)	1310
Bsu36I	CCTNAGG	1 cut(s)	1089
BsuI	GTATCC	2 cut(s)	631, 1491
BsuRI	GGCC	3 cut(s)	60, 1276, 1452
BtsCI	GGATG	7 cut(s)	10, 145, 277, 735, 850, 983, 1084
BtsIMutI	CAGTG	3 cut(s)	528, 1326, 1521
Cac8I	GCNNGC	3 cut(s)	690, 964, 1258
CfoI	GCGC	3 cut(s)	421, 777, 968
Cfr10I	RCCGGY	1 cut(s)	310
Cfr13I	GGNCC	3 cut(s)	41, 1400, 1451
CseI	GACGC	2 cut(s)	114, 1049
CsiI	ACCWGGT	1 cut(s)	189
Csp6I	GTAC	7 cut(s)	241, 526, 593, 619, 923, 1078, 1543
CviQI	GTAC	7 cut(s)	241, 526, 593, 619, 923, 1078, 1543
DdeI	CTNAG	7 cut(s)	204, 683, 744, 860, 1089, 1244, 1283
DpnI	GATC	5 cut(s)	936, 1031, 1047, 1312, 1443
DpnII	GATC	5 cut(s)	934, 1029, 1045, 1310, 1441
DrdI	GACNNNNNNGTC	2 cut(s)	361, 1536
DseDI	GACNNNNNNGTC	2 cut(s)	361, 1536
EaeI	YGGCCR	1 cut(s)	58
Eam1104I	CTCTTC	1 cut(s)	910
EarI	CTCTTC	1 cut(s)	910
Eco130I	CCWWGG	1 cut(s)	839
Eco147I	AGGCCT	1 cut(s)	1276
Eco32I	GATATC	1 cut(s)	564
Eco47I	GGWCC	2 cut(s)	41, 1400
Eco47III	AGCGCT	1 cut(s)	967
Eco81I	CCTNAGG	1 cut(s)	1089
Eco88I	CYCGRG	1 cut(s)	1318
EcoO109I	RGGNCCY	1 cut(s)	41
EcoRII	CCWGG	4 cut(s)	60, 189, 643, 1182
EcoRV	GATATC	1 cut(s)	564
EcoT14I	CCWWGG	1 cut(s)	839
ErhI	CCWWGG	1 cut(s)	839
Esp3I	CGTCTC	1 cut(s)	251
FalI	AAGNNNNNCTT	2 cut(s)	832, 864
FaqI	GGGAC	1 cut(s)	571
FauNDI	CATATG	1 cut(s)	486
FblI	GTMKAC	3 cut(s)	365, 491, 1383
Fnu4HI	GCNGC	7 cut(s)	123, 437, 720, 900, 1254, 1368, 1498
FokI	GGATG	7 cut(s)	17, 152, 284, 742, 857, 990, 1071
Fsp4HI	GCNGC	7 cut(s)	123, 437, 720, 900, 1254, 1368, 1498
GlaI	GCGC	3 cut(s)	420, 776, 967
GluI	GCNGC	7 cut(s)	123, 437, 720, 900, 1254, 1368, 1498
HaeII	RGCGCY	3 cut(s)	422, 778, 969
HaeIII	GGCC	3 cut(s)	60, 1276, 1452
HapII	CCGG	2 cut(s)	98, 311
HgaI	GACGC	2 cut(s)	114, 1049
HhaI	GCGC	3 cut(s)	421, 777, 968
Hin1I	GRCGYC	1 cut(s)	125
Hin6I	GCGC	3 cut(s)	419, 775, 966
HinP1I	GCGC	3 cut(s)	419, 775, 966
HincII	GTYRAC	3 cut(s)	366, 808, 1384
HindII	GTYRAC	3 cut(s)	366, 808, 1384
HindIII	AAGCTT	2 cut(s)	857, 1019
HinfI	GANTC	5 cut(s)	53, 347, 478, 1409, 1524
HpaII	CCGG	2 cut(s)	98, 311
HphI	GGTGA	4 cut(s)	146, 1198, 1231, 1559
Hpy166II	GTNNAC	7 cut(s)	241, 366, 492, 528, 808, 987, 1384
Hpy188I	TCNGA	7 cut(s)	130, 147, 318, 411, 664, 1492, 1529
Hpy188III	TCNNGA	5 cut(s)	28, 98, 256, 872, 1088
Hpy8I	GTNNAC	7 cut(s)	241, 366, 492, 528, 808, 987, 1384
Hpy99I	CGWCG	3 cut(s)	23, 134, 358
HpyAV	CCTTC	3 cut(s)	719, 1362, 1552
HpyCH4III	ACNGT	5 cut(s)	134, 372, 451, 1516, 1538
HpyCH4IV	ACGT	3 cut(s)	260, 356, 989
HpyF10VI	GCNNNNNNNGC	6 cut(s)	427, 436, 698, 963, 1040, 1223
HpyF3I	CTNAG	7 cut(s)	204, 683, 744, 860, 1089, 1244, 1283
HpySE526I	ACGT	3 cut(s)	260, 356, 989
Hsp92I	GRCGYC	1 cut(s)	125
HspAI	GCGC	3 cut(s)	419, 775, 966
Kpn2I	TCCGGA	1 cut(s)	97
Kzo9I	GATC	5 cut(s)	934, 1029, 1045, 1310, 1441
LmnI	GCTCC	2 cut(s)	91, 148
Lsp1109I	GCAGC	6 cut(s)	448, 706, 886, 1265, 1354, 1509
LweI	GCATC	6 cut(s)	130, 268, 490, 706, 835, 1354
MabI	ACCWGGT	1 cut(s)	189
MaeII	ACGT	3 cut(s)	260, 356, 989
MaeIII	GTNAC	2 cut(s)	1237, 1468
MalI	GATC	5 cut(s)	936, 1031, 1047, 1312, 1443
MboI	GATC	5 cut(s)	934, 1029, 1045, 1310, 1441
MboII	GAAGA	7 cut(s)	92, 95, 122, 260, 287, 457, 897
MfeI	CAATTG	1 cut(s)	783
MflI	RGATCY	1 cut(s)	1310
MhlI	GDGCHC	1 cut(s)	432
MlsI	TGGCCA	1 cut(s)	60
MluCI	AATT	6 cut(s)	607, 655, 783, 830, 1173, 1262
MluNI	TGGCCA	1 cut(s)	60
MlyI	GAGTC	4 cut(s)	62, 341, 472, 1403
MmeI	TCCRAC	1 cut(s)	153
Mox20I	TGGCCA	1 cut(s)	60
MroI	TCCGGA	1 cut(s)	97
MscI	TGGCCA	1 cut(s)	60
MseI	TTAA	4 cut(s)	324, 570, 828, 882
MslI	CAYNNNNRTG	1 cut(s)	1331
Msp20I	TGGCCA	1 cut(s)	60
MspA1I	CMGCKG	1 cut(s)	230
MspI	CCGG	2 cut(s)	98, 311
MspR9I	CCNGG	4 cut(s)	62, 191, 645, 1184
MunI	CAATTG	1 cut(s)	783
MvaI	CCWGG	4 cut(s)	62, 191, 645, 1184
MvnI	CGCG	1 cut(s)	1043
MwoI	GCNNNNNNNGC	6 cut(s)	427, 436, 698, 963, 1040, 1223
NdeI	CATATG	1 cut(s)	486
NdeII	GATC	5 cut(s)	934, 1029, 1045, 1310, 1441
NlaIV	GGNNCC	1 cut(s)	43
NmuCI	GTSAC	1 cut(s)	1237
PceI	AGGCCT	1 cut(s)	1276
PcsI	WCGNNNNNNNCGW	1 cut(s)	362
PfeI	GAWTC	1 cut(s)	1524
PkrI	GCNGC	7 cut(s)	124, 438, 721, 901, 1255, 1369, 1499
PleI	GAGTC	4 cut(s)	61, 341, 472, 1403
PpsI	GAGTC	4 cut(s)	61, 341, 472, 1403
PpuMI	RGGWCCY	1 cut(s)	41
PshAI	GACNNNNGTC	1 cut(s)	263
PshBI	ATTAAT	1 cut(s)	882
Psp5II	RGGWCCY	1 cut(s)	41
Psp6I	CCWGG	4 cut(s)	60, 189, 643, 1182
PspGI	CCWGG	4 cut(s)	60, 189, 643, 1182
PspN4I	GGNNCC	1 cut(s)	43
PspPI	GGNCC	3 cut(s)	41, 1400, 1451
PspPPI	RGGWCCY	1 cut(s)	41
PstI	CTGCAG	2 cut(s)	724, 976
PsuI	RGATCY	1 cut(s)	1310
RsaI	GTAC	7 cut(s)	242, 527, 594, 620, 924, 1079, 1544
RsaNI	GTAC	7 cut(s)	241, 526, 593, 619, 923, 1078, 1543
RseI	CAYNNNNRTG	1 cut(s)	1331
SalI	GTCGAC	2 cut(s)	364, 1382
SaqAI	TTAA	4 cut(s)	324, 570, 828, 882
SatI	GCNGC	7 cut(s)	123, 437, 720, 900, 1254, 1368, 1498
Sau3AI	GATC	5 cut(s)	934, 1029, 1045, 1310, 1441
Sau96I	GGNCC	3 cut(s)	41, 1400, 1451
SchI	GAGTC	4 cut(s)	62, 341, 472, 1403
ScrFI	CCNGG	4 cut(s)	62, 191, 645, 1184
SduI	GDGCHC	1 cut(s)	432
SexAI	ACCWGGT	1 cut(s)	189
SfaNI	GCATC	6 cut(s)	130, 268, 490, 706, 835, 1354
SfcI	CTRYAG	3 cut(s)	225, 720, 972
SinI	GGWCC	2 cut(s)	41, 1400
SmiMI	CAYNNNNRTG	1 cut(s)	1331
SmlI	CTYRAG	1 cut(s)	596
SmoI	CTYRAG	1 cut(s)	596
Sse9I	AATT	6 cut(s)	607, 655, 783, 830, 1173, 1262
SseBI	AGGCCT	1 cut(s)	1276
SsiI	CCGC	3 cut(s)	122, 230, 1043
SspI	AATATT	1 cut(s)	322
StuI	AGGCCT	1 cut(s)	1276
StyD4I	CCNGG	4 cut(s)	60, 189, 643, 1182
StyI	CCWWGG	1 cut(s)	839
TaaI	ACNGT	5 cut(s)	134, 372, 451, 1516, 1538
TaiI	ACGT	3 cut(s)	263, 359, 992
TaqI	TCGA	7 cut(s)	51, 255, 353, 365, 392, 1383, 1506
TasI	AATT	6 cut(s)	607, 655, 783, 830, 1173, 1262
TatI	WGTACW	3 cut(s)	592, 922, 1077
TauI	GCSGC	1 cut(s)	125
TfiI	GAWTC	1 cut(s)	1524
Tru1I	TTAA	4 cut(s)	324, 570, 828, 882
Tru9I	TTAA	4 cut(s)	324, 570, 828, 882
TscAI	CASTG	3 cut(s)	535, 1333, 1521
TseFI	GTSAC	1 cut(s)	1237
TseI	GCWGC	6 cut(s)	436, 719, 899, 1253, 1367, 1497
Tsp45I	GTSAC	1 cut(s)	1237
TspDTI	ATGAA	5 cut(s)	288, 561, 681, 1013, 1445
TspRI	CASTG	3 cut(s)	535, 1333, 1521
VpaK11BI	GGWCC	2 cut(s)	41, 1400
VspI	ATTAAT	1 cut(s)	882
XapI	RAATTY	1 cut(s)	1173
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1394
XmiI	GTMKAC	3 cut(s)	365, 491, 1383

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.