116 kDa U5 small nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06220 AT1G06220 AT1G06220 AT5G25230 AT5G25230 |
| fragaria_vesca | FvH4_2g24581 FvH4_7g03790 FvH4_7g03790 FvH4_7g03790 |
| malus_domestica | MD02G1013600.v1.1 MD15G1160400.v1.1 |
| prunus_persica | Prupe.3G036300_v2.0.a1 |
| pyrus_communis | pycom02g01260 pycom15g14420 |
| rosa_chinensis | RchiOBHm_Chr1g0327101 RchiOBHm_Chr1g0327121 RchiOBHm_Chr2g0127751 |
| rosa_laevigata | RLG00000012029 RLG00000012030 RLG00000030043 |
| rosa_multiflora | Rmu_sc0000795.1_g000050 Rmu_sc0004240.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00323330 Rroxscaffold_6G00399840 Rroxscaffold_6G00400180 |
| rosa_rugosa | Rorug01G0063500 |
| rosa_samantha | Rh1AG080100 Rh1AG080300 Rh1AG080700 Rh1AG080900 Rh1BG064100 Rh1CG078700 Rh1CG078800 Rh1DG085100 Rh1DG085200 Rh2AG323400 Rh2BG332600 Rh2DG350900 |
| rosa_wichuraiana | Rw1G006400 Rw2G026250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 60 |
| AclWI | GGATC | 3 cut(s) | 14, 27, 196 |
| AcsI | RAATTY | 1 cut(s) | 86 |
| AgsI | TTSAA | 2 cut(s) | 56, 197 |
| AjnI | CCWGG | 2 cut(s) | 13, 75 |
| AlwI | GGATC | 3 cut(s) | 14, 27, 196 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 76 |
| ApoI | RAATTY | 1 cut(s) | 86 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 9 |
| BamHI | GGATCC | 1 cut(s) | 19 |
| BauI | CACGAG | 1 cut(s) | 81 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 62, 96 |
| BciT130I | CCWGG | 2 cut(s) | 15, 77 |
| BciVI | GTATCC | 1 cut(s) | 121 |
| BfuI | GTATCC | 1 cut(s) | 121 |
| Bme1390I | CCNGG | 2 cut(s) | 15, 77 |
| BmiI | GGNNCC | 1 cut(s) | 21 |
| BmrFI | CCNGG | 2 cut(s) | 15, 77 |
| BsaJI | CCNNGG | 1 cut(s) | 14 |
| BseBI | CCWGG | 2 cut(s) | 15, 77 |
| BseDI | CCNNGG | 1 cut(s) | 14 |
| Bsp143I | GATC | 2 cut(s) | 19, 188 |
| BspACI | CCGC | 1 cut(s) | 60 |
| BspLI | GGNNCC | 1 cut(s) | 21 |
| BspPI | GGATC | 3 cut(s) | 14, 27, 196 |
| BssECI | CCNNGG | 1 cut(s) | 14 |
| BssMI | GATC | 2 cut(s) | 19, 188 |
| BssSI | CACGAG | 1 cut(s) | 81 |
| Bst2BI | CACGAG | 1 cut(s) | 81 |
| Bst2UI | CCWGG | 2 cut(s) | 15, 77 |
| BstKTI | GATC | 2 cut(s) | 22, 191 |
| BstMBI | GATC | 2 cut(s) | 19, 188 |
| BstNI | CCWGG | 2 cut(s) | 15, 77 |
| BstSCI | CCNGG | 2 cut(s) | 13, 75 |
| BstX2I | RGATCY | 1 cut(s) | 19 |
| BstYI | RGATCY | 1 cut(s) | 19 |
| BsuI | GTATCC | 1 cut(s) | 121 |
| BtsI | GCAGTG | 1 cut(s) | 199 |
| BtsIMutI | CAGTG | 1 cut(s) | 199 |
| CaiI | CAGNNNCTG | 1 cut(s) | 76 |
| CviJI | RGCY | 1 cut(s) | 80 |
| CviKI_1 | RGCY | 1 cut(s) | 80 |
| DpnI | GATC | 2 cut(s) | 21, 190 |
| DpnII | GATC | 2 cut(s) | 19, 188 |
| EcoRII | CCWGG | 2 cut(s) | 13, 75 |
| FaiI | YATR | 1 cut(s) | 92 |
| FauI | CCCGC | 1 cut(s) | 67 |
| HinfI | GANTC | 1 cut(s) | 67 |
| Hpy188I | TCNGA | 1 cut(s) | 164 |
| Hpy188III | TCNNGA | 3 cut(s) | 26, 83, 97 |
| HpyAV | CCTTC | 1 cut(s) | 179 |
| Kzo9I | GATC | 2 cut(s) | 19, 188 |
| LpnPI | CCDG | 3 cut(s) | 27, 62, 89 |
| MalI | GATC | 2 cut(s) | 21, 190 |
| MboI | GATC | 2 cut(s) | 19, 188 |
| MfeI | CAATTG | 1 cut(s) | 192 |
| MflI | RGATCY | 1 cut(s) | 19 |
| MluCI | AATT | 3 cut(s) | 5, 86, 192 |
| MnlI | CCTC | 2 cut(s) | 33, 118 |
| MroXI | GAANNNNTTC | 1 cut(s) | 9 |
| MspR9I | CCNGG | 2 cut(s) | 15, 77 |
| MunI | CAATTG | 1 cut(s) | 192 |
| MvaI | CCWGG | 2 cut(s) | 15, 77 |
| NdeII | GATC | 2 cut(s) | 19, 188 |
| NlaIV | GGNNCC | 1 cut(s) | 21 |
| PdmI | GAANNNNTTC | 1 cut(s) | 9 |
| PfeI | GAWTC | 1 cut(s) | 67 |
| Psp6I | CCWGG | 2 cut(s) | 13, 75 |
| PspGI | CCWGG | 2 cut(s) | 13, 75 |
| PspN4I | GGNNCC | 1 cut(s) | 21 |
| PstNI | CAGNNNCTG | 1 cut(s) | 76 |
| PsuI | RGATCY | 1 cut(s) | 19 |
| Sau3AI | GATC | 2 cut(s) | 19, 188 |
| ScrFI | CCNGG | 2 cut(s) | 15, 77 |
| SetI | ASST | 1 cut(s) | 78 |
| Sse9I | AATT | 3 cut(s) | 5, 86, 192 |
| SsiI | CCGC | 1 cut(s) | 60 |
| StyD4I | CCNGG | 2 cut(s) | 13, 75 |
| TasI | AATT | 3 cut(s) | 5, 86, 192 |
| TfiI | GAWTC | 1 cut(s) | 67 |
| TscAI | CASTG | 1 cut(s) | 206 |
| TspDTI | ATGAA | 2 cut(s) | 128, 141 |
| TspRI | CASTG | 1 cut(s) | 206 |
| XapI | RAATTY | 1 cut(s) | 86 |
| XmnI | GAANNNNTTC | 1 cut(s) | 9 |