Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0002643

Physical Location & Seq

Genomic Coordinates Reverse (-)

14669957 .. 14672752

Gene Structure 2796 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012029

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGTACTATCATCCGGATGCCGGGATTTTTAGGAGTGAAGCCCCAGCCAGTGGAGGAGAAAGGGCTTTTGTTCAGTTTGTGCTTGAACCCTTGTACAAGATTTATAGTCAGGTGATTGGAGAACACGAGAAGAGTGTGCAGGCAACTCTTGCAGAACTTGGTGTCAGGCTAAATGCCAATGCAGCTCGCAAATTAAATGTTAGAGCTCTGCTGAGGTTGGCGTGTAGCTCAATTTTTGGGTCTGCCTCAGGCTTCACCGATATGCTGGCCATGAAAACTTGTGATGCCAATGGGCCTTTGATGGTCAATGTGACCAAGTTATATCCTAAGCCTGACTGTAGTGCTGTCGATGCATTTGGTAGAGTTTATAGTGGCAAGATTCAGACAGGGCAGGCTGTACTTGTATTGGGAGAAGCCTATTCACCGGATGAGGATGAGGAGGACATGGCAGATAAAGAAGTGACAAAATTATGGCTTTATCAATCTCGGGATAGGGTATCGATAGCTGAGGCTGCTGCTGGTACTTGGGTTCTCATTGAAGGTGTGGATTCTTCTATTACAAAGACAGCCACTCTTTGTAACTATGAGACTGGTTCTGATCATAATGAGGATCCTGCTTATTATATATTTCGTCCTCTTCAGTTCAATACTGTCCCAGTTATGAAAACAGCAATTGAGCCTCTAAATCCAAGTGAATTGCCGAAAATGGTGGATGGTCTTAGAAAGATAAGCAAGAGCTATCCTCTTGCTATCACTAAAGTTGAGGAGTCTGGAGATCAGCACACTATATCTGGTACAGGAGAGCTATACTTGGATTCCATCTTGATGGACCTTAGAGAGCTAGCTGCGGATCCTTTTGTTTCATTCTGTGAAACAGTGAGGGAGTCCTCATCAAGGAATTGCTTTGCTGAAACGCCGAATAAGAAGAACAAAATACCTATGAGGGCGGAGCCATTGGAGAGGGGACTTGCTGAGGACATTGAGAATGGTCTGAAAGAAAAGAGTAATTTCTTGCAGACTAGATATGATTGGGATGTTCTTGCTAAAGGACCAAACATTCTATTAGATGACACACTTCCAGCTGAAGTTGACAAAAGCTTGCTGATTGCAGTGAAGGATTCCATTGTTCAAAGAAACGTGAAGTTCAAAATAGTTGTTGCAAGAATTGCCCATGAGCCATTGCACCGTGGATCAGGTCAAATCATTCCCACATCTCGGCGTGTGGCCTATTCATCTTTCCTAATGGCAATCCCACAGCTTATGGAGCCGGTATATCATGTGAATATACAAACTCCAATGTACTGCTTTTCTGCAATCTACAGTATTTTATCACGCAGGTGTGGACGACAAGTTGATGCTCCTCAACCTATAGCTGGTACACCAGCTTATATTGTCAAGGCATTTGTCCCGGTTATAGAATCATTTGGCTTTGAGACAAATTTTAGGTACCATACTCAAGGACAAGCATTTTGCCAATCAGTTTTTGATCATTGGGATATAGTTCCTGGGGATCCCCTAGACAGTAGCATTGTTCTGGGGCCACTGGAGCCTGCACCATATCAACATCTGGCTCGTGAGTTTATGGTCAAGACAAGGCGTCGAAAGGGAATGAGTGAGGATTTCAGCATCAACAAGTTTTTTGACGAGGCCATGGTGATGGAGCTTGCTCAGCAGGCTGCTCGTCGATCTCCATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005730 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0007275 GO:0008150 GO:0009506 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0010154 GO:0015030 GO:0016020 GO:0016604 GO:0016607 GO:0022414 GO:0030054 GO:0030312 GO:0030532 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043900 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045694 GO:0046540 GO:0048316 GO:0048367 GO:0048437 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0070013 GO:0071007 GO:0071013 GO:0071944 GO:0090567 GO:0097525 GO:0097526 GO:0099402 GO:0120114 GO:1902494 GO:1990904 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

EFG_C EFG_IV EFTUD2 GTP_EFTU GTP_EFTU_D2

Protein Analysis

566

Amino Acids

62.99

Weight (kDa)

5.64

Isoelectric Point (pI)

44.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU_D2	PF03144	118 - 193	1.3e-08	Elongation factor Tu domain 2
EFG_C	PF00679	419 - 507	1.6e-18	Elongation factor G C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06220 AT1G06220 AT1G06220 AT5G25230 AT5G25230
fragaria_vesca	FvH4_2g24581 FvH4_7g03790 FvH4_7g03790 FvH4_7g03790
malus_domestica	MD02G1013600.v1.1 MD15G1160400.v1.1
prunus_persica	Prupe.3G036300_v2.0.a1
pyrus_communis	pycom02g01260 pycom15g14420
rosa_chinensis	RchiOBHm_Chr1g0327101 RchiOBHm_Chr1g0327121 RchiOBHm_Chr2g0127751
rosa_laevigata	RLG00000012029 RLG00000012030 RLG00000030043
rosa_multiflora	Rmu_sc0000795.1_g000050 Rmu_sc0004240.1_g000007
rosa_roxburghii	Rroxscaffold_4G00323330 Rroxscaffold_6G00399840 Rroxscaffold_6G00400180
rosa_rugosa	Rorug01G0063500
rosa_samantha	Rh1AG080100 Rh1AG080300 Rh1AG080700 Rh1AG080900 Rh1BG064100 Rh1CG078700 Rh1CG078800 Rh1DG085100 Rh1DG085200 Rh2AG323400 Rh2BG332600 Rh2DG350900
rosa_wichuraiana	Rw1G006400 Rw2G026250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1326
Acc36I	ACCTGC	1 cut(s)	1326
Acc65I	GGTACC	1 cut(s)	1446
AccB1I	GGYRCC	1 cut(s)	1446
AccB7I	CCANNNNNTGG	1 cut(s)	50
AccIII	TCCGGA	1 cut(s)	13
AciI	CCGC	2 cut(s)	848, 947
AclWI	GGATC	7 cut(s)	605, 618, 845, 858, 1198, 1505, 1518
AcoI	YGGCCR	1 cut(s)	267
AcsI	RAATTY	1 cut(s)	1438
AcuI	CTGAAG	2 cut(s)	623, 1104
AcyI	GRCGYC	1 cut(s)	1597
AfaI	GTAC	8 cut(s)	5, 95, 399, 523, 796, 1301, 1378, 1448
AfiI	CCNNNNNNNGG	5 cut(s)	20, 50, 894, 1215, 1373
AgsI	TTSAA	5 cut(s)	86, 539, 646, 1130, 1147
AhdI	GACNNNNNGTC	1 cut(s)	1596
AjnI	CCWGG	1 cut(s)	1504
AleI	CACNNNNGTG	1 cut(s)	1336
Alw21I	GWGCWC	1 cut(s)	208
Alw26I	GTCTC	2 cut(s)	581, 1427
AlwI	GGATC	7 cut(s)	605, 618, 845, 858, 1198, 1505, 1518
Ama87I	CYCGRG	1 cut(s)	486
Aor13HI	TCCGGA	1 cut(s)	13
AoxI	GGCC	5 cut(s)	267, 293, 1224, 1538, 1647
ApeKI	GCWGC	5 cut(s)	182, 512, 515, 845, 1676
ApoI	RAATTY	1 cut(s)	1438
ArsI	GACNNNNNNTTYG	2 cut(s)	1452, 1484
Asp718I	GGTACC	1 cut(s)	1446
AspS9I	GGNCC	4 cut(s)	293, 829, 1049, 1538
AsuC2I	CCSGG	2 cut(s)	22, 1409
AsuHPI	GGTGA	4 cut(s)	124, 247, 414, 1666
AsuNHI	GCTAGC	1 cut(s)	841
AvaI	CYCGRG	1 cut(s)	486
AvaII	GGWCC	2 cut(s)	829, 1049
AxyI	CCTNAGG	1 cut(s)	247
BaeI	ACNNNNGTAYC	2 cut(s)	513, 546
BalI	TGGCCA	1 cut(s)	269
BamHI	GGATCC	3 cut(s)	610, 850, 1510
BanI	GGYRCC	1 cut(s)	1446
BanII	GRGCYC	1 cut(s)	208
BauI	CACGAG	2 cut(s)	125, 1572
Bbv12I	GWGCWC	1 cut(s)	208
BbvCI	CCTCAGC	3 cut(s)	212, 507, 972
BbvI	GCAGC	5 cut(s)	194, 499, 502, 832, 1663
BccI	CCATC	5 cut(s)	295, 707, 820, 827, 1651
BcgI	CGANNNNNNTGC	2 cut(s)	1661, 1695
BciT130I	CCWGG	1 cut(s)	1506
BclI	TGATCA	2 cut(s)	598, 1486
BcnI	CCSGG	2 cut(s)	22, 1409
BcoDI	GTCTC	2 cut(s)	581, 1427
BfaI	CTAG	3 cut(s)	842, 1020, 1517
BfmI	CTRYAG	3 cut(s)	337, 1318, 1368
BfuAI	ACCTGC	1 cut(s)	1326
BisI	GCNGC	5 cut(s)	183, 513, 516, 846, 1677
BlpI	GCTNAGC	1 cut(s)	1668
BlsI	GCNGC	5 cut(s)	184, 514, 517, 847, 1678
Bme1390I	CCNGG	3 cut(s)	22, 1409, 1506
Bme18I	GGWCC	2 cut(s)	829, 1049
BmeRI	GACNNNNNGTC	1 cut(s)	1596
BmeT110I	CYCGRG	1 cut(s)	486
BmgT120I	GGNCC	4 cut(s)	293, 829, 1049, 1538
BmiI	GGNNCC	8 cut(s)	612, 852, 951, 1266, 1448, 1512, 1539, 1548
BmrFI	CCNGG	3 cut(s)	22, 1409, 1506
BmrI	ACTGGG	1 cut(s)	650
BmsI	GCATC	5 cut(s)	7, 274, 340, 1345, 1635
BmtI	GCTAGC	1 cut(s)	845
BmuI	ACTGGG	1 cut(s)	650
BplI	GAGNNNNNCTC	2 cut(s)	727, 759
BpmI	CTGGAG	2 cut(s)	792, 1565
Bpu10I	CCTNAGC	4 cut(s)	212, 327, 507, 972
Bpu1102I	GCTNAGC	1 cut(s)	1668
BpuEI	CTTGAG	1 cut(s)	1440
BpuMI	CCSGG	2 cut(s)	22, 1409
Bsa29I	ATCGAT	1 cut(s)	500
BsaHI	GRCGYC	1 cut(s)	1597
BsaJI	CCNNGG	3 cut(s)	1186, 1505, 1650
BsaWI	WCCGGW	2 cut(s)	13, 424
Bsc4I	CCNNNNNNNGG	5 cut(s)	20, 50, 894, 1215, 1373
Bse118I	RCCGGY	1 cut(s)	1267
Bse1I	ACTGG	4 cut(s)	48, 595, 656, 1548
Bse21I	CCTNAGG	1 cut(s)	247
Bse3DI	GCAATG	1 cut(s)	1178
BseAI	TCCGGA	1 cut(s)	13
BseBI	CCWGG	1 cut(s)	1506
BseCI	ATCGAT	1 cut(s)	500
BseDI	CCNNGG	3 cut(s)	1186, 1505, 1650
BseGI	GGATG	6 cut(s)	10, 22, 433, 439, 718, 1039
BseLI	CCNNNNNNNGG	5 cut(s)	20, 50, 894, 1215, 1373
BseMI	GCAATG	1 cut(s)	1178
BseMII	CTCAG	5 cut(s)	203, 261, 498, 963, 1682
BseNI	ACTGG	4 cut(s)	48, 595, 656, 1548
BseRI	GAGGAG	4 cut(s)	69, 452, 779, 1350
BseXI	GCAGC	5 cut(s)	194, 499, 502, 832, 1663
BseYI	CCCAGC	1 cut(s)	43
BsgI	GTGCAG	2 cut(s)	158, 1536
BshFI	GGCC	5 cut(s)	269, 295, 1226, 1540, 1649
BshNI	GGYRCC	1 cut(s)	1446
BshVI	ATCGAT	1 cut(s)	500
BsiHKAI	GWGCWC	1 cut(s)	208
BsiHKCI	CYCGRG	1 cut(s)	486
BsiSI	CCGG	5 cut(s)	14, 21, 425, 1268, 1409
BslFI	GGGAC	3 cut(s)	638, 978, 1391
BslI	CCNNNNNNNGG	5 cut(s)	20, 50, 894, 1215, 1373
BsmAI	GTCTC	2 cut(s)	581, 1427
BsmFI	GGGAC	3 cut(s)	638, 978, 1391
BsnI	GGCC	5 cut(s)	269, 295, 1226, 1540, 1649
BsoBI	CYCGRG	1 cut(s)	486
Bsp1286I	GDGCHC	1 cut(s)	208
Bsp13I	TCCGGA	1 cut(s)	13
Bsp1407I	TGTACA	1 cut(s)	93
Bsp143I	GATC	8 cut(s)	598, 610, 775, 850, 1190, 1486, 1510, 1685
Bsp1720I	GCTNAGC	1 cut(s)	1668
Bsp19I	CCATGG	1 cut(s)	1650
BspACI	CCGC	2 cut(s)	848, 947
BspANI	GGCC	5 cut(s)	269, 295, 1226, 1540, 1649
BspCNI	CTCAG	5 cut(s)	204, 260, 499, 964, 1681
BspDI	ATCGAT	1 cut(s)	500
BspEI	TCCGGA	1 cut(s)	13
BspLI	GGNNCC	8 cut(s)	612, 852, 951, 1266, 1448, 1512, 1539, 1548
BspMI	ACCTGC	1 cut(s)	1326
BspOI	GCTAGC	1 cut(s)	845
BspPI	GGATC	7 cut(s)	605, 618, 845, 858, 1198, 1505, 1518
BspT107I	GGYRCC	1 cut(s)	1446
BsrDI	GCAATG	1 cut(s)	1178
BsrFI	RCCGGY	1 cut(s)	1267
BsrGI	TGTACA	1 cut(s)	93
BsrI	ACTGG	4 cut(s)	48, 595, 656, 1548
BssAI	RCCGGY	1 cut(s)	1267
BssECI	CCNNGG	3 cut(s)	1186, 1505, 1650
BssMI	GATC	8 cut(s)	598, 610, 775, 850, 1190, 1486, 1510, 1685
BssNI	GRCGYC	1 cut(s)	1597
BssSI	CACGAG	2 cut(s)	125, 1572
BssT1I	CCWWGG	1 cut(s)	1650
Bst2BI	CACGAG	2 cut(s)	125, 1572
Bst2UI	CCWGG	1 cut(s)	1506
Bst4CI	ACNGT	6 cut(s)	338, 652, 877, 1187, 1322, 1523
Bst6I	CTCTTC	2 cut(s)	125, 642
BstACI	GRCGYC	1 cut(s)	1597
BstAPI	GCANNNNNTGC	2 cut(s)	149, 1166
BstAUI	TGTACA	1 cut(s)	93
BstC8I	GCNNGC	9 cut(s)	141, 187, 267, 393, 843, 1100, 1551, 1665, 1674
BstDEI	CTNAG	8 cut(s)	212, 247, 327, 507, 719, 833, 972, 1668
BstDSI	CCRYGG	2 cut(s)	1186, 1650
BstENI	CCTNNNNNAGG	1 cut(s)	892
BstF5I	GGATG	6 cut(s)	10, 22, 433, 439, 718, 1039
BstKTI	GATC	8 cut(s)	601, 613, 778, 853, 1193, 1489, 1513, 1688
BstMAI	GTCTC	2 cut(s)	581, 1427
BstMBI	GATC	8 cut(s)	598, 610, 775, 850, 1190, 1486, 1510, 1685
BstMWI	GCNNNNNNNGC	9 cut(s)	149, 182, 350, 512, 1166, 1264, 1546, 1669, 1673
BstNI	CCWGG	1 cut(s)	1506
BstSCI	CCNGG	3 cut(s)	20, 1407, 1504
BstSFI	CTRYAG	3 cut(s)	337, 1318, 1368
BstV1I	GCAGC	5 cut(s)	194, 499, 502, 832, 1663
BstX2I	RGATCY	3 cut(s)	610, 850, 1510
BstXI	CCANNNNNNTGG	2 cut(s)	826, 1657
BstYI	RGATCY	3 cut(s)	610, 850, 1510
Bsu15I	ATCGAT	1 cut(s)	500
Bsu36I	CCTNAGG	1 cut(s)	247
BsuRI	GGCC	5 cut(s)	269, 295, 1226, 1540, 1649
BsuTUI	ATCGAT	1 cut(s)	500
BtgI	CCRYGG	2 cut(s)	1186, 1650
BtsCI	GGATG	6 cut(s)	10, 22, 433, 439, 718, 1039
BtsI	GCAGTG	1 cut(s)	1116
BtsIMutI	CAGTG	4 cut(s)	55, 882, 1116, 1541
BveI	ACCTGC	1 cut(s)	1326
Cac8I	GCNNGC	9 cut(s)	141, 187, 267, 393, 843, 1100, 1551, 1665, 1674
Cfr10I	RCCGGY	1 cut(s)	1267
Cfr13I	GGNCC	4 cut(s)	293, 829, 1049, 1538
ClaI	ATCGAT	1 cut(s)	500
CseI	GACGC	1 cut(s)	1586
Csp6I	GTAC	8 cut(s)	4, 94, 398, 522, 795, 1300, 1377, 1447
CviAII	CATG	5 cut(s)	271, 445, 1172, 1277, 1651
CviQI	GTAC	8 cut(s)	4, 94, 398, 522, 795, 1300, 1377, 1447
DdeI	CTNAG	8 cut(s)	212, 247, 327, 507, 719, 833, 972, 1668
DpnI	GATC	8 cut(s)	600, 612, 777, 852, 1192, 1488, 1512, 1687
DpnII	GATC	8 cut(s)	598, 610, 775, 850, 1190, 1486, 1510, 1685
DriI	GACNNNNNGTC	1 cut(s)	1596
EaeI	YGGCCR	1 cut(s)	267
Eam1104I	CTCTTC	2 cut(s)	125, 642
Eam1105I	GACNNNNNGTC	1 cut(s)	1596
EarI	CTCTTC	2 cut(s)	125, 642
EciI	GGCGGA	1 cut(s)	962
Ecl136II	GAGCTC	1 cut(s)	206
Eco130I	CCWWGG	1 cut(s)	1650
Eco24I	GRGCYC	1 cut(s)	208
Eco47I	GGWCC	2 cut(s)	829, 1049
Eco53kI	GAGCTC	1 cut(s)	206
Eco57I	CTGAAG	2 cut(s)	623, 1104
Eco81I	CCTNAGG	1 cut(s)	247
Eco88I	CYCGRG	1 cut(s)	486
EcoICRI	GAGCTC	1 cut(s)	206
EcoNI	CCTNNNNNAGG	1 cut(s)	892
EcoRII	CCWGG	1 cut(s)	1504
EcoT14I	CCWWGG	1 cut(s)	1650
EcoT22I	ATGCAT	1 cut(s)	355
EcoT38I	GRGCYC	1 cut(s)	208
ErhI	CCWWGG	1 cut(s)	1650
FaeI	CATG	5 cut(s)	274, 448, 1175, 1280, 1654
FaqI	GGGAC	3 cut(s)	638, 978, 1391
FatI	CATG	5 cut(s)	270, 444, 1171, 1276, 1650
FbaI	TGATCA	2 cut(s)	598, 1486
Fnu4HI	GCNGC	5 cut(s)	183, 513, 516, 846, 1677
FokI	GGATG	5 cut(s)	29, 440, 446, 725, 1046
FriOI	GRGCYC	1 cut(s)	208
Fsp4HI	GCNGC	5 cut(s)	183, 513, 516, 846, 1677
FspBI	CTAG	3 cut(s)	842, 1020, 1517
GluI	GCNGC	5 cut(s)	183, 513, 516, 846, 1677
GsaI	CCCAGC	1 cut(s)	47
GsuI	CTGGAG	2 cut(s)	792, 1565
HaeIII	GGCC	5 cut(s)	269, 295, 1226, 1540, 1649
HapII	CCGG	5 cut(s)	14, 21, 425, 1268, 1409
HgaI	GACGC	1 cut(s)	1586
Hin1I	GRCGYC	1 cut(s)	1597
Hin1II	CATG	5 cut(s)	274, 448, 1175, 1280, 1654
HincII	GTYRAC	1 cut(s)	1090
HindII	GTYRAC	1 cut(s)	1090
HindIII	AAGCTT	1 cut(s)	1096
HinfI	GANTC	7 cut(s)	379, 548, 767, 815, 884, 1118, 1418
HpaII	CCGG	5 cut(s)	14, 21, 425, 1268, 1409
HphI	GGTGA	4 cut(s)	124, 247, 414, 1666
Hpy166II	GTNNAC	3 cut(s)	1090, 1343, 1379
Hpy188I	TCNGA	3 cut(s)	384, 598, 993
Hpy188III	TCNNGA	6 cut(s)	14, 488, 771, 823, 1574, 1588
Hpy8I	GTNNAC	3 cut(s)	1090, 1343, 1379
Hpy99I	CGWCG	2 cut(s)	1602, 1686
HpyAV	CCTTC	2 cut(s)	533, 1108
HpyCH4III	ACNGT	6 cut(s)	338, 652, 877, 1187, 1322, 1523
HpyCH4IV	ACGT	1 cut(s)	1137
HpyF10VI	GCNNNNNNNGC	9 cut(s)	149, 182, 350, 512, 1166, 1264, 1546, 1669, 1673
HpyF3I	CTNAG	8 cut(s)	212, 247, 327, 507, 719, 833, 972, 1668
HpySE526I	ACGT	1 cut(s)	1137
Hsp92I	GRCGYC	1 cut(s)	1597
Hsp92II	CATG	5 cut(s)	274, 448, 1175, 1280, 1654
Kpn2I	TCCGGA	1 cut(s)	13
KpnI	GGTACC	1 cut(s)	1450
Ksp22I	TGATCA	2 cut(s)	598, 1486
Kzo9I	GATC	8 cut(s)	598, 610, 775, 850, 1190, 1486, 1510, 1685
LmnI	GCTCC	5 cut(s)	949, 1264, 1363, 1546, 1660
Lsp1109I	GCAGC	5 cut(s)	194, 499, 502, 832, 1663
LweI	GCATC	5 cut(s)	7, 274, 340, 1345, 1635
MaeI	CTAG	3 cut(s)	842, 1020, 1517
MaeII	ACGT	1 cut(s)	1137
MaeIII	GTNAC	3 cut(s)	310, 460, 578
MalI	GATC	8 cut(s)	600, 612, 777, 852, 1192, 1488, 1512, 1687
MboI	GATC	8 cut(s)	598, 610, 775, 850, 1190, 1486, 1510, 1685
MboII	GAAGA	4 cut(s)	142, 543, 629, 937
MfeI	CAATTG	1 cut(s)	672
MflI	RGATCY	3 cut(s)	610, 850, 1510
MhlI	GDGCHC	1 cut(s)	208
MlsI	TGGCCA	1 cut(s)	269
MluCI	AATT	9 cut(s)	191, 231, 467, 672, 695, 898, 1006, 1164, 1438
MluNI	TGGCCA	1 cut(s)	269
MlyI	GAGTC	2 cut(s)	776, 893
Mox20I	TGGCCA	1 cut(s)	269
Mph1103I	ATGCAT	1 cut(s)	355
MroI	TCCGGA	1 cut(s)	13
MscI	TGGCCA	1 cut(s)	269
MseI	TTAA	1 cut(s)	194
MslI	CAYNNNNRTG	5 cut(s)	15, 260, 824, 1336, 1655
Msp20I	TGGCCA	1 cut(s)	269
MspA1I	CMGCKG	1 cut(s)	1082
MspI	CCGG	5 cut(s)	14, 21, 425, 1268, 1409
MspR9I	CCNGG	3 cut(s)	22, 1409, 1506
MunI	CAATTG	1 cut(s)	672
MvaI	CCWGG	1 cut(s)	1506
MwoI	GCNNNNNNNGC	9 cut(s)	149, 182, 350, 512, 1166, 1264, 1546, 1669, 1673
NciI	CCSGG	2 cut(s)	22, 1409
NcoI	CCATGG	1 cut(s)	1650
NdeII	GATC	8 cut(s)	598, 610, 775, 850, 1190, 1486, 1510, 1685
NheI	GCTAGC	1 cut(s)	841
NlaIII	CATG	5 cut(s)	274, 448, 1175, 1280, 1654
NlaIV	GGNNCC	8 cut(s)	612, 852, 951, 1266, 1448, 1512, 1539, 1548
NmeAIII	GCCGAG	1 cut(s)	1195
NmuCI	GTSAC	2 cut(s)	310, 460
NsiI	ATGCAT	1 cut(s)	355
OliI	CACNNNNGTG	1 cut(s)	1336
PaqCI	CACCTGC	1 cut(s)	1326
PfeI	GAWTC	5 cut(s)	379, 548, 815, 1118, 1418
PflMI	CCANNNNNTGG	1 cut(s)	50
PkrI	GCNGC	5 cut(s)	184, 514, 517, 847, 1678
PleI	GAGTC	2 cut(s)	775, 892
PpsI	GAGTC	2 cut(s)	775, 892
Psp124BI	GAGCTC	1 cut(s)	208
Psp6I	CCWGG	1 cut(s)	1504
PspFI	CCCAGC	1 cut(s)	43
PspGI	CCWGG	1 cut(s)	1504
PspN4I	GGNNCC	8 cut(s)	612, 852, 951, 1266, 1448, 1512, 1539, 1548
PspPI	GGNCC	4 cut(s)	293, 829, 1049, 1538
PsuI	RGATCY	3 cut(s)	610, 850, 1510
PvuII	CAGCTG	1 cut(s)	1082
RsaI	GTAC	8 cut(s)	5, 95, 399, 523, 796, 1301, 1378, 1448
RsaNI	GTAC	8 cut(s)	4, 94, 398, 522, 795, 1300, 1377, 1447
RseI	CAYNNNNRTG	5 cut(s)	15, 260, 824, 1336, 1655
SacI	GAGCTC	1 cut(s)	208
SaqAI	TTAA	1 cut(s)	194
SatI	GCNGC	5 cut(s)	183, 513, 516, 846, 1677
Sau3AI	GATC	8 cut(s)	598, 610, 775, 850, 1190, 1486, 1510, 1685
Sau96I	GGNCC	4 cut(s)	293, 829, 1049, 1538
SchI	GAGTC	2 cut(s)	776, 893
ScrFI	CCNGG	3 cut(s)	22, 1409, 1506
SduI	GDGCHC	1 cut(s)	208
SfaNI	GCATC	5 cut(s)	7, 274, 340, 1345, 1635
SfcI	CTRYAG	3 cut(s)	337, 1318, 1368
SinI	GGWCC	2 cut(s)	829, 1049
SmiMI	CAYNNNNRTG	5 cut(s)	15, 260, 824, 1336, 1655
SmlI	CTYRAG	1 cut(s)	1455
SmoI	CTYRAG	1 cut(s)	1455
Sse9I	AATT	9 cut(s)	191, 231, 467, 672, 695, 898, 1006, 1164, 1438
SsiI	CCGC	2 cut(s)	848, 947
SspMI	CTAG	3 cut(s)	842, 1020, 1517
SstI	GAGCTC	1 cut(s)	208
StyD4I	CCNGG	3 cut(s)	20, 1407, 1504
StyI	CCWWGG	1 cut(s)	1650
TaaI	ACNGT	6 cut(s)	338, 652, 877, 1187, 1322, 1523
TaiI	ACGT	1 cut(s)	1140
TaqI	TCGA	4 cut(s)	348, 500, 1600, 1684
TasI	AATT	9 cut(s)	191, 231, 467, 672, 695, 898, 1006, 1164, 1438
TatI	WGTACW	4 cut(s)	3, 93, 397, 1299
TfiI	GAWTC	5 cut(s)	379, 548, 815, 1118, 1418
Tru1I	TTAA	1 cut(s)	194
Tru9I	TTAA	1 cut(s)	194
TscAI	CASTG	4 cut(s)	55, 882, 1116, 1548
TseFI	GTSAC	2 cut(s)	310, 460
TseI	GCWGC	5 cut(s)	182, 512, 515, 845, 1676
Tsp45I	GTSAC	2 cut(s)	310, 460
TspDTI	ATGAA	4 cut(s)	287, 677, 852, 1221
TspRI	CASTG	4 cut(s)	55, 882, 1116, 1548
Van91I	CCANNNNNTGG	1 cut(s)	50
VpaK11BI	GGWCC	2 cut(s)	829, 1049
XagI	CCTNNNNNAGG	1 cut(s)	892
XapI	RAATTY	1 cut(s)	1438
XspI	CTAG	3 cut(s)	842, 1020, 1517
Zsp2I	ATGCAT	1 cut(s)	355

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.