Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0002643

Physical Location & Seq

Genomic Coordinates Reverse (-)

16512339 .. 16516082

Gene Structure 3744 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG078700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGCTTTGCAAGTGCTACTGCAGGATGGTCGTTCACGTTGCAATCATTTGCAAAGCTATATATGTTAAGCTTCATGGGATCGCTTTTGACGCGGATCAGTTTACTTCTCATCTATGGGGAGATATGTGCTATCATCCTGACGACAGGGCTTTCAGGAGAAAACCCCCTGCAAGTGGAGGAGAAAGGTCGTTTGTCCAGTTTGTGCTTGAACCCCTGTATAAAATTTATAGCCAGGTGATTGGAGAACATAAAAAGAGTGTTGAGGCAACTCTTGCTGAACTTGGTGTCACCCTTAGCAATGCAGCTTACAAATTGAATGTTAGGCCTCTACTGAGGTTGGCTTGTAGCTCGGTTTTTGGATCTGCCTCGGGCTTCACTGATATGCTTGTGCAACATATTCCTTCTCCTAAAGATGCTGCAACAAGGAAAGTCGACCACACATATACTGGACCAAAAGACTCTTTGATTTACAAAACCATGAAAACTTGTGATCCCAATGGCCCGTTGATGGTAAATGTTACCAAGCTGTATCCCAAGTCCGATTGTAGCGTGTTCGATGCATTTGGTAGGGTATACAGTGGCAAGATTCAGACAGGACAGTCAGTGCGAGTATTGGGAGAAGGGTATTCACCTGACGATGAGGAGGACATGACAGTCAAAGAAGTAATGAAGCTATGGCTTTACCAAGCGCGAGATAGGATACCTATAGCTGAAGCTCCTCCTGGTACTTGGGTTCTCATCGAAGGGGTGGATGCTTCCATAATGAAAACTGCCACTCTGTGTAATGAGAGTTATGACGAGGATGTATACAGATTCTGTCCTCTTCAGTTCAATACACTGCCAGTGGTGAAAACGGCAACTGAGCCTCTAAATCCCAGTGAGTTGCCAAAAATGGTGGAGGGTCTTAGAAAGATCTGCAAGAGTTATCCTCTTGCCATAACCAAAGTTGAGGAGTCTGGGGAGCACACAATCTTAGGTACAGGAGAACTGTATTTGGATTCCATCATGAAGGACCTCAGAGAGCTCTACTCTGAAGTAGAAGTCAAGGTTGCAGATCCTGTTGTTTCATTCTGCGAAACAGTTGTGGAATCTTCATCAATGAAGTGTTTTGCTGAAACACCAAACAAGAAGAATAAAATTACTATGATTGCAGAGCCATTAGAGAGAGGACTTGCGGAGGACATTGAGAAAGGTGTTGTAAGCATTGATTGGTCTAGGAGAGATATAGGTAATTTCTTCCAGACTAGGTATGAGTGGGATGTTCTTGCTGCACGGTCCATATGGGCATTCGGTCCTGATAAGCAGGGACCCAACATACTACTTGGTGACACGCATTCAAGCGAAGTTGACAAGAGCTTGCTGAATGCTGTGAAAGGCTCCATTGTGCAAGGGTTTCAGTGGGGTGCTCGAGAAGGACCTCTGTGTGATGAACCCATCAGAAATGTTAAGTTCAAGATTGTTGATGCAAGGATTGCACCTGAGCCGTTGCATCGTGGATCTGGTCAAATCATTCCCACATCTCGACGTGTGGCCTATTCATCTTTCCTAATGGCAACCCCACGGCTCATGGAGCCAGTATATTATGTGGAGATACAAACGCCAATCGACTGTGTATCTGCAATCTACACTGTTTTATCTCGCAGGCGTGGACATGTTACAGCCGATGTTCCTCAACCCGGGACCCCAGCTTACATCGTTAAGGCATTTTTACCCGTCATAGAATCGTTTGGTTTTGAGACGGACTTGAGGTACCATACTCAAGGACAGGCTTTTTGTCTCTCAGTCTTTGATCATTGGGCTATAGTTCCTGGGGATCCTCTTGACAAGAGTATTGTTCTGCGACCACTTGAACCCGCACCGATTGAGCACTGGCTCGTGAATTTATGGTCAAGACAAGGCGTAGAAAGGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005730 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0007275 GO:0008150 GO:0009506 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0010154 GO:0015030 GO:0016020 GO:0016604 GO:0016607 GO:0022414 GO:0030054 GO:0030312 GO:0030532 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043900 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045694 GO:0046540 GO:0048316 GO:0048367 GO:0048437 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0070013 GO:0071007 GO:0071013 GO:0071944 GO:0090567 GO:0097525 GO:0097526 GO:0099402 GO:0120114 GO:1902494 GO:1990904 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

EFG_C EFG_IV EFTUD2 GTP_EFTU GTP_EFTU_D2

Protein Analysis

637

Amino Acids

71.34

Weight (kDa)

6.03

Isoelectric Point (pI)

36.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU_D2	PF03144	187 - 261	2.4e-09	Elongation factor Tu domain 2
EFG_IV	PF03764	407 - 518	9.5e-18	Elongation factor G, domain IV
EFG_C	PF00679	521 - 609	1.8e-22	Elongation factor G C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06220 AT1G06220 AT1G06220 AT5G25230 AT5G25230
fragaria_vesca	FvH4_2g24581 FvH4_7g03790 FvH4_7g03790 FvH4_7g03790
malus_domestica	MD02G1013600.v1.1 MD15G1160400.v1.1
prunus_persica	Prupe.3G036300_v2.0.a1
pyrus_communis	pycom02g01260 pycom15g14420
rosa_chinensis	RchiOBHm_Chr1g0327101 RchiOBHm_Chr1g0327121 RchiOBHm_Chr2g0127751
rosa_laevigata	RLG00000012029 RLG00000012030 RLG00000030043
rosa_multiflora	Rmu_sc0000795.1_g000050 Rmu_sc0004240.1_g000007
rosa_roxburghii	Rroxscaffold_4G00323330 Rroxscaffold_6G00399840 Rroxscaffold_6G00400180
rosa_rugosa	Rorug01G0063500
rosa_samantha	Rh1AG080100 Rh1AG080300 Rh1AG080700 Rh1AG080900 Rh1BG064100 Rh1CG078700 Rh1CG078800 Rh1DG085100 Rh1DG085200 Rh2AG323400 Rh2BG332600 Rh2DG350900
rosa_wichuraiana	Rw1G006400 Rw2G026250

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	598, 653
Acc65I	GGTACC	1 cut(s)	1749
AccB1I	GGYRCC	1 cut(s)	1749
AccI	GTMKAC	3 cut(s)	432, 573, 807
AccII	CGCG	2 cut(s)	92, 691
AciI	CCGC	3 cut(s)	92, 1175, 1854
AclWI	GGATC	8 cut(s)	86, 102, 367, 485, 1049, 1504, 1808, 1821
AcsI	RAATTY	2 cut(s)	222, 1879
AcuI	CTGAAG	3 cut(s)	732, 809, 1053
AdeI	CACNNNGTG	1 cut(s)	780
AfaI	GTAC	3 cut(s)	727, 979, 1751
AfiI	CCNNNNNNNGG	3 cut(s)	173, 508, 1676
AflIII	ACRYGT	2 cut(s)	1525, 1651
AgsI	TTSAA	6 cut(s)	209, 316, 832, 1338, 1453, 1850
AjiI	CACGTC	1 cut(s)	1526
AjnI	CCWGG	3 cut(s)	231, 721, 1807
Alw21I	GWGCWC	4 cut(s)	966, 1026, 1408, 1869
Alw26I	GTCTC	2 cut(s)	1730, 1781
AlwI	GGATC	8 cut(s)	86, 102, 367, 485, 1049, 1504, 1808, 1821
AlwNI	CAGNNNCTG	2 cut(s)	816, 1058
Ama87I	CYCGRG	3 cut(s)	367, 1407, 1676
AoxI	GGCC	3 cut(s)	323, 499, 1530
ApeKI	GCWGC	3 cut(s)	302, 416, 1268
ApoI	RAATTY	2 cut(s)	222, 1879
ArsI	GACNNNNNNTTYG	2 cut(s)	1755, 1787
Asp718I	GGTACC	1 cut(s)	1749
AspLEI	GCGC	1 cut(s)	691
AspS9I	GGNCC	8 cut(s)	449, 500, 1012, 1275, 1292, 1307, 1415, 1680
AsuC2I	CCSGG	2 cut(s)	1677, 1678
AsuHPI	GGTGA	5 cut(s)	247, 280, 621, 859, 1337
AvaI	CYCGRG	3 cut(s)	367, 1407, 1676
AvaII	GGWCC	7 cut(s)	449, 1012, 1275, 1292, 1307, 1415, 1680
BaeI	ACNNNNGTAYC	2 cut(s)	717, 750
BamHI	GGATCC	1 cut(s)	1813
BanI	GGYRCC	1 cut(s)	1749
BanII	GRGCYC	1 cut(s)	1026
BauI	CACGAG	1 cut(s)	1874
Bbv12I	GWGCWC	4 cut(s)	966, 1026, 1408, 1869
BbvI	GCAGC	3 cut(s)	314, 403, 1255
BccI	CCATC	4 cut(s)	19, 502, 1010, 1442
BceAI	ACGGC	3 cut(s)	870, 1468, 1577
BcgI	CGANNNNNNTGC	2 cut(s)	10, 44
BciT130I	CCWGG	3 cut(s)	233, 723, 1809
BciVI	GTATCC	2 cut(s)	540, 693
BclI	TGATCA	1 cut(s)	1789
BcnI	CCSGG	2 cut(s)	1677, 1678
BcoDI	GTCTC	2 cut(s)	1730, 1781
BfaI	CTAG	2 cut(s)	1215, 1245
BfmI	CTRYAG	3 cut(s)	19, 705, 1800
BfuI	GTATCC	2 cut(s)	540, 693
BglII	AGATCT	1 cut(s)	912
BisI	GCNGC	3 cut(s)	303, 417, 1269
BlsI	GCNGC	3 cut(s)	304, 418, 1270
Bme1390I	CCNGG	5 cut(s)	233, 723, 1677, 1678, 1809
Bme18I	GGWCC	7 cut(s)	449, 1012, 1275, 1292, 1307, 1415, 1680
BmeT110I	CYCGRG	3 cut(s)	367, 1407, 1676
BmgBI	CACGTC	1 cut(s)	1526
BmgT120I	GGNCC	8 cut(s)	449, 500, 1012, 1275, 1292, 1307, 1415, 1680
BmiI	GGNNCC	8 cut(s)	1308, 1309, 1378, 1572, 1681, 1682, 1751, 1815
BmrFI	CCNGG	5 cut(s)	233, 723, 1677, 1678, 1809
BmrI	ACTGGG	1 cut(s)	870
BmsI	GCATC	5 cut(s)	403, 547, 742, 1453, 1498
BmuI	ACTGGG	1 cut(s)	870
BplI	GAGNNNNNCTC	4 cut(s)	913, 945, 1013, 1045
Bpu10I	CCTNAGC	2 cut(s)	293, 1479
BpuEI	CTTGAG	2 cut(s)	1743, 1765
BpuMI	CCSGG	2 cut(s)	1677, 1678
BsaJI	CCNNGG	4 cut(s)	366, 1559, 1676, 1808
Bsc4I	CCNNNNNNNGG	3 cut(s)	173, 508, 1676
Bse1I	ACTGG	6 cut(s)	196, 451, 842, 876, 1574, 1874
Bse3DI	GCAATG	1 cut(s)	304
BseBI	CCWGG	3 cut(s)	233, 723, 1809
BseDI	CCNNGG	4 cut(s)	366, 1559, 1676, 1808
BseGI	GGATG	5 cut(s)	30, 133, 757, 808, 1264
BseLI	CCNNNNNNNGG	3 cut(s)	173, 508, 1676
BseMI	GCAATG	1 cut(s)	304
BseMII	CTCAG	5 cut(s)	323, 852, 1030, 1470, 1794
BseNI	ACTGG	6 cut(s)	196, 451, 842, 876, 1574, 1874
BseRI	GAGGAG	4 cut(s)	192, 656, 708, 965
BseXI	GCAGC	3 cut(s)	314, 403, 1255
BseYI	CCCAGC	1 cut(s)	1684
BsgI	GTGCAG	1 cut(s)	1254
Bsh1236I	CGCG	2 cut(s)	92, 691
BshFI	GGCC	3 cut(s)	325, 501, 1532
BshNI	GGYRCC	1 cut(s)	1749
BsiHKAI	GWGCWC	4 cut(s)	966, 1026, 1408, 1869
BsiHKCI	CYCGRG	3 cut(s)	367, 1407, 1676
BsiSI	CCGG	1 cut(s)	1677
BslFI	GGGAC	2 cut(s)	1320, 1693
BslI	CCNNNNNNNGG	3 cut(s)	173, 508, 1676
BsmAI	GTCTC	2 cut(s)	1730, 1781
BsmBI	CGTCTC	1 cut(s)	1730
BsmFI	GGGAC	2 cut(s)	1320, 1693
BsmI	GAATGC	3 cut(s)	1286, 1333, 1369
BsnI	GGCC	3 cut(s)	325, 501, 1532
BsoBI	CYCGRG	3 cut(s)	367, 1407, 1676
Bsp1286I	GDGCHC	4 cut(s)	966, 1026, 1408, 1869
Bsp143I	GATC	9 cut(s)	78, 94, 359, 490, 912, 1054, 1496, 1789, 1813
BspACI	CCGC	3 cut(s)	92, 1175, 1854
BspANI	GGCC	3 cut(s)	325, 501, 1532
BspCNI	CTCAG	5 cut(s)	324, 853, 1029, 1471, 1793
BspFNI	CGCG	2 cut(s)	92, 691
BspHI	TCATGA	1 cut(s)	1005
BspLI	GGNNCC	8 cut(s)	1308, 1309, 1378, 1572, 1681, 1682, 1751, 1815
BspMAI	CTGCAG	1 cut(s)	23
BspPI	GGATC	8 cut(s)	86, 102, 367, 485, 1049, 1504, 1808, 1821
BspT107I	GGYRCC	1 cut(s)	1749
BsrDI	GCAATG	1 cut(s)	304
BsrI	ACTGG	6 cut(s)	196, 451, 842, 876, 1574, 1874
BssECI	CCNNGG	4 cut(s)	366, 1559, 1676, 1808
BssMI	GATC	9 cut(s)	78, 94, 359, 490, 912, 1054, 1496, 1789, 1813
BssNAI	GTATAC	2 cut(s)	574, 808
BssSI	CACGAG	1 cut(s)	1874
Bst1107I	GTATAC	2 cut(s)	574, 808
Bst2BI	CACGAG	1 cut(s)	1874
Bst2UI	CCWGG	3 cut(s)	233, 723, 1809
Bst4CI	ACNGT	8 cut(s)	578, 600, 655, 990, 1081, 1275, 1610, 1630
Bst6I	CTCTTC	1 cut(s)	828
BstAPI	GCANNNNNTGC	2 cut(s)	272, 1472
BstC8I	GCNNGC	2 cut(s)	1358, 1643
BstDEI	CTNAG	8 cut(s)	293, 332, 861, 905, 973, 1016, 1479, 1780
BstDSI	CCRYGG	1 cut(s)	1559
BstF5I	GGATG	5 cut(s)	30, 133, 757, 808, 1264
BstFNI	CGCG	2 cut(s)	92, 691
BstHHI	GCGC	1 cut(s)	691
BstKTI	GATC	9 cut(s)	81, 97, 362, 493, 915, 1057, 1499, 1792, 1816
BstMAI	GTCTC	2 cut(s)	1730, 1781
BstMBI	GATC	9 cut(s)	78, 94, 359, 490, 912, 1054, 1496, 1789, 1813
BstMWI	GCNNNNNNNGC	4 cut(s)	89, 272, 1472, 1570
BstNI	CCWGG	3 cut(s)	233, 723, 1809
BstNSI	RCATGY	1 cut(s)	1655
BstSCI	CCNGG	5 cut(s)	231, 721, 1675, 1676, 1807
BstSFI	CTRYAG	3 cut(s)	19, 705, 1800
BstUI	CGCG	2 cut(s)	92, 691
BstV1I	GCAGC	3 cut(s)	314, 403, 1255
BstX2I	RGATCY	5 cut(s)	359, 912, 1054, 1496, 1813
BstXI	CCANNNNNNTGG	1 cut(s)	239
BstYI	RGATCY	5 cut(s)	359, 912, 1054, 1496, 1813
BstZ17I	GTATAC	2 cut(s)	574, 808
BsuI	GTATCC	2 cut(s)	540, 693
BsuRI	GGCC	3 cut(s)	325, 501, 1532
BtgI	CCRYGG	1 cut(s)	1559
BtrI	CACGTC	1 cut(s)	1526
BtsCI	GGATG	5 cut(s)	30, 133, 757, 808, 1264
BtsI	GCAGTG	1 cut(s)	836
BtsIMutI	CAGTG	9 cut(s)	375, 583, 609, 836, 849, 883, 1403, 1626, 1867
Cac8I	GCNNGC	2 cut(s)	1358, 1643
CaiI	CAGNNNCTG	2 cut(s)	816, 1058
CciI	TCATGA	1 cut(s)	1005
CfoI	GCGC	1 cut(s)	691
Cfr13I	GGNCC	8 cut(s)	449, 500, 1012, 1275, 1292, 1307, 1415, 1680
Cfr9I	CCCGGG	1 cut(s)	1676
CseI	GACGC	1 cut(s)	98
Csp6I	GTAC	3 cut(s)	726, 978, 1750
CspCI	CAANNNNNGTGG	2 cut(s)	876, 911
CviAII	CATG	6 cut(s)	74, 478, 649, 1006, 1567, 1652
CviQI	GTAC	3 cut(s)	726, 978, 1750
DdeI	CTNAG	8 cut(s)	293, 332, 861, 905, 973, 1016, 1479, 1780
DpnI	GATC	9 cut(s)	80, 96, 361, 492, 914, 1056, 1498, 1791, 1815
DpnII	GATC	9 cut(s)	78, 94, 359, 490, 912, 1054, 1496, 1789, 1813
DraIII	CACNNNGTG	1 cut(s)	780
DrdI	GACNNNNNNGTC	2 cut(s)	598, 653
DseDI	GACNNNNNNGTC	2 cut(s)	598, 653
Eam1104I	CTCTTC	1 cut(s)	828
EarI	CTCTTC	1 cut(s)	828
Ecl136II	GAGCTC	1 cut(s)	1024
Eco147I	AGGCCT	1 cut(s)	325
Eco24I	GRGCYC	1 cut(s)	1026
Eco47I	GGWCC	7 cut(s)	449, 1012, 1275, 1292, 1307, 1415, 1680
Eco53kI	GAGCTC	1 cut(s)	1024
Eco57I	CTGAAG	3 cut(s)	732, 809, 1053
Eco88I	CYCGRG	3 cut(s)	367, 1407, 1676
EcoICRI	GAGCTC	1 cut(s)	1024
EcoO109I	RGGNCCY	4 cut(s)	1012, 1307, 1415, 1680
EcoRII	CCWGG	3 cut(s)	231, 721, 1807
EcoT22I	ATGCAT	1 cut(s)	562
EcoT38I	GRGCYC	1 cut(s)	1026
Esp3I	CGTCTC	1 cut(s)	1730
FaeI	CATG	6 cut(s)	77, 481, 652, 1009, 1570, 1655
FaqI	GGGAC	2 cut(s)	1320, 1693
FatI	CATG	6 cut(s)	73, 477, 648, 1005, 1566, 1651
FauI	CCCGC	1 cut(s)	1861
FauNDI	CATATG	1 cut(s)	1280
FbaI	TGATCA	1 cut(s)	1789
FblI	GTMKAC	3 cut(s)	432, 573, 807
Fnu4HI	GCNGC	3 cut(s)	303, 417, 1269
FokI	GGATG	5 cut(s)	37, 120, 764, 815, 1271
FriOI	GRGCYC	1 cut(s)	1026
Fsp4HI	GCNGC	3 cut(s)	303, 417, 1269
FspBI	CTAG	2 cut(s)	1215, 1245
GlaI	GCGC	1 cut(s)	690
GluI	GCNGC	3 cut(s)	303, 417, 1269
GsaI	CCCAGC	1 cut(s)	1688
HaeIII	GGCC	3 cut(s)	325, 501, 1532
HapII	CCGG	1 cut(s)	1677
HgaI	GACGC	1 cut(s)	98
HhaI	GCGC	1 cut(s)	691
Hin1II	CATG	6 cut(s)	77, 481, 652, 1009, 1570, 1655
Hin6I	GCGC	1 cut(s)	689
HinP1I	GCGC	1 cut(s)	689
HincII	GTYRAC	2 cut(s)	433, 1348
HindII	GTYRAC	2 cut(s)	433, 1348
HindIII	AAGCTT	1 cut(s)	68
HinfI	GANTC	7 cut(s)	458, 586, 813, 953, 998, 1088, 1721
HpaII	CCGG	1 cut(s)	1677
HphI	GGTGA	5 cut(s)	247, 280, 621, 859, 1337
Hpy166II	GTNNAC	7 cut(s)	34, 102, 433, 574, 808, 1348, 1649
Hpy188I	TCNGA	5 cut(s)	541, 591, 1019, 1033, 1439
Hpy8I	GTNNAC	7 cut(s)	34, 102, 433, 574, 808, 1348, 1649
Hpy99I	CGWCG	1 cut(s)	1527
HpyAV	CCTTC	5 cut(s)	411, 614, 737, 1003, 1406
HpyCH4III	ACNGT	8 cut(s)	578, 600, 655, 990, 1081, 1275, 1610, 1630
HpyCH4IV	ACGT	2 cut(s)	36, 1525
HpyF10VI	GCNNNNNNNGC	4 cut(s)	89, 272, 1472, 1570
HpyF3I	CTNAG	8 cut(s)	293, 332, 861, 905, 973, 1016, 1479, 1780
HpySE526I	ACGT	2 cut(s)	36, 1525
Hsp92II	CATG	6 cut(s)	77, 481, 652, 1009, 1570, 1655
HspAI	GCGC	1 cut(s)	689
KflI	GGGWCCC	2 cut(s)	1307, 1680
KpnI	GGTACC	1 cut(s)	1753
Ksp22I	TGATCA	1 cut(s)	1789
Kzo9I	GATC	9 cut(s)	78, 94, 359, 490, 912, 1054, 1496, 1789, 1813
LmnI	GCTCC	4 cut(s)	721, 961, 1382, 1570
Lsp1109I	GCAGC	3 cut(s)	314, 403, 1255
LweI	GCATC	5 cut(s)	403, 547, 742, 1453, 1498
MaeI	CTAG	2 cut(s)	1215, 1245
MaeII	ACGT	2 cut(s)	36, 1525
MaeIII	GTNAC	4 cut(s)	286, 517, 1325, 1654
MalI	GATC	9 cut(s)	80, 96, 361, 492, 914, 1056, 1498, 1791, 1815
MboI	GATC	9 cut(s)	78, 94, 359, 490, 912, 1054, 1496, 1789, 1813
MboII	GAAGA	4 cut(s)	815, 1083, 1141, 1228
MflI	RGATCY	5 cut(s)	359, 912, 1054, 1496, 1813
MhlI	GDGCHC	4 cut(s)	966, 1026, 1408, 1869
MluCI	AATT	5 cut(s)	222, 311, 1137, 1231, 1879
MlyI	GAGTC	2 cut(s)	452, 962
Mph1103I	ATGCAT	1 cut(s)	562
MseI	TTAA	3 cut(s)	66, 1446, 1698
MslI	CAYNNNNRTG	1 cut(s)	380
MspI	CCGG	1 cut(s)	1677
MspR9I	CCNGG	5 cut(s)	233, 723, 1677, 1678, 1809
Mva1269I	GAATGC	3 cut(s)	1286, 1333, 1369
MvaI	CCWGG	3 cut(s)	233, 723, 1809
MvnI	CGCG	2 cut(s)	92, 691
MwoI	GCNNNNNNNGC	4 cut(s)	89, 272, 1472, 1570
NciI	CCSGG	2 cut(s)	1677, 1678
NdeI	CATATG	1 cut(s)	1280
NdeII	GATC	9 cut(s)	78, 94, 359, 490, 912, 1054, 1496, 1789, 1813
NlaIII	CATG	6 cut(s)	77, 481, 652, 1009, 1570, 1655
NlaIV	GGNNCC	8 cut(s)	1308, 1309, 1378, 1572, 1681, 1682, 1751, 1815
NmuCI	GTSAC	2 cut(s)	286, 1325
NsiI	ATGCAT	1 cut(s)	562
NspI	RCATGY	1 cut(s)	1655
PaeR7I	CTCGAG	1 cut(s)	1407
PagI	TCATGA	1 cut(s)	1005
PceI	AGGCCT	1 cut(s)	325
PciI	ACATGT	1 cut(s)	1651
PctI	GAATGC	3 cut(s)	1286, 1333, 1369
PfeI	GAWTC	5 cut(s)	586, 813, 998, 1088, 1721
PkrI	GCNGC	3 cut(s)	304, 418, 1270
PleI	GAGTC	2 cut(s)	452, 961
PpsI	GAGTC	2 cut(s)	452, 961
PpuMI	RGGWCCY	4 cut(s)	1012, 1307, 1415, 1680
PscI	ACATGT	1 cut(s)	1651
Psp124BI	GAGCTC	1 cut(s)	1026
Psp5II	RGGWCCY	4 cut(s)	1012, 1307, 1415, 1680
Psp6I	CCWGG	3 cut(s)	231, 721, 1807
PspFI	CCCAGC	1 cut(s)	1684
PspGI	CCWGG	3 cut(s)	231, 721, 1807
PspN4I	GGNNCC	8 cut(s)	1308, 1309, 1378, 1572, 1681, 1682, 1751, 1815
PspPI	GGNCC	8 cut(s)	449, 500, 1012, 1275, 1292, 1307, 1415, 1680
PspPPI	RGGWCCY	4 cut(s)	1012, 1307, 1415, 1680
PstI	CTGCAG	1 cut(s)	23
PstNI	CAGNNNCTG	2 cut(s)	816, 1058
PsuI	RGATCY	5 cut(s)	359, 912, 1054, 1496, 1813
RsaI	GTAC	3 cut(s)	727, 979, 1751
RsaNI	GTAC	3 cut(s)	726, 978, 1750
RseI	CAYNNNNRTG	1 cut(s)	380
SacI	GAGCTC	1 cut(s)	1026
SalI	GTCGAC	1 cut(s)	431
SaqAI	TTAA	3 cut(s)	66, 1446, 1698
SatI	GCNGC	3 cut(s)	303, 417, 1269
Sau3AI	GATC	9 cut(s)	78, 94, 359, 490, 912, 1054, 1496, 1789, 1813
Sau96I	GGNCC	8 cut(s)	449, 500, 1012, 1275, 1292, 1307, 1415, 1680
SchI	GAGTC	2 cut(s)	452, 962
ScrFI	CCNGG	5 cut(s)	233, 723, 1677, 1678, 1809
SduI	GDGCHC	4 cut(s)	966, 1026, 1408, 1869
SfaNI	GCATC	5 cut(s)	403, 547, 742, 1453, 1498
SfcI	CTRYAG	3 cut(s)	19, 705, 1800
Sfr274I	CTCGAG	1 cut(s)	1407
SinI	GGWCC	7 cut(s)	449, 1012, 1275, 1292, 1307, 1415, 1680
SlaI	CTCGAG	1 cut(s)	1407
SmaI	CCCGGG	1 cut(s)	1678
SmiMI	CAYNNNNRTG	1 cut(s)	380
SmlI	CTYRAG	3 cut(s)	1407, 1744, 1758
SmoI	CTYRAG	3 cut(s)	1407, 1744, 1758
Sse9I	AATT	5 cut(s)	222, 311, 1137, 1231, 1879
SseBI	AGGCCT	1 cut(s)	325
SsiI	CCGC	3 cut(s)	92, 1175, 1854
SspMI	CTAG	2 cut(s)	1215, 1245
SstI	GAGCTC	1 cut(s)	1026
StuI	AGGCCT	1 cut(s)	325
StyD4I	CCNGG	5 cut(s)	231, 721, 1675, 1676, 1807
TaaI	ACNGT	8 cut(s)	578, 600, 655, 990, 1081, 1275, 1610, 1630
TaiI	ACGT	2 cut(s)	39, 1528
TaqI	TCGA	6 cut(s)	432, 555, 741, 1408, 1522, 1605
TaqII	GACCGA	1 cut(s)	1280
TasI	AATT	5 cut(s)	222, 311, 1137, 1231, 1879
TfiI	GAWTC	5 cut(s)	586, 813, 998, 1088, 1721
Tru1I	TTAA	3 cut(s)	66, 1446, 1698
Tru9I	TTAA	3 cut(s)	66, 1446, 1698
TscAI	CASTG	9 cut(s)	382, 583, 609, 843, 849, 883, 1403, 1633, 1874
TseFI	GTSAC	2 cut(s)	286, 1325
TseI	GCWGC	3 cut(s)	302, 416, 1268
Tsp45I	GTSAC	2 cut(s)	286, 1325
TspGWI	ACGGA	1 cut(s)	1754
TspMI	CCCGGG	1 cut(s)	1676
TspRI	CASTG	9 cut(s)	382, 583, 609, 843, 849, 883, 1403, 1633, 1874
VpaK11BI	GGWCC	7 cut(s)	449, 1012, 1275, 1292, 1307, 1415, 1680
XapI	RAATTY	2 cut(s)	222, 1879
XceI	RCATGY	1 cut(s)	1655
XcmI	CCANNNNNNNNNTGG	1 cut(s)	443
XhoI	CTCGAG	1 cut(s)	1407
XmaI	CCCGGG	1 cut(s)	1676
XmiI	GTMKAC	3 cut(s)	432, 573, 807
XspI	CTAG	2 cut(s)	1215, 1245
Zsp2I	ATGCAT	1 cut(s)	562

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.