Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0002643

Physical Location & Seq

Genomic Coordinates Forward (+)

53838480 .. 53843538

Gene Structure 5059 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030043

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2178 bp

ATGGGCTGCATTTTCATTTCAAAGGTTGACAGGTTGATAACAGAACTTAAATTGCCCCCAAGGGATGCGTACTTCAAGCTTAGGCATACTCTGGAAGTGATTAATAACCACATAACGGCTGCCTCTTCAACTGCTGGTCATGTACAAGTTATTGATCCTGTTGCTGGAAACGTATGCTTTGCAAGTGCTACTGCAGGATGGTCGTTCACGTTGCAATCATTTGCAAAGCTATATGTTAAGCTTCATGGGATCGCTTTTGACGCGGATCAGTTTGCTTCTCGTCTATGGGGAGATATGTACTATCATCCTGAGGACAGGGCTTTCAGGAGAAAACCCCCTGCAAGTGGAGGAGAAAGGTCGTTTGTCCAGTTTGTGCTTGAACCCCTGTATAAAATTTATAGCCAGGTGATTGGAGAACATAAAAAGAGTGTTGAGGCAACTCTTGCTGAACTTGGTGTCACCCTTAGCAATGCAGCTTACAAATTGAATGTTAGGCCTCTACTGAGGTTGGCTTGTAGCTCGGTTTTTGGATCTGCCTCGGGCTTCACTGATATGCTTGTGCAACATATTCCTTCTCCTAAAGATGCTGCAACAAGGAAAGTCGACCACACATATACTGGACCAAAAGACTCTTTGATTTACAAAGCCATGAAAACTTGTGATCCCAATGGCCCGTTGATGGTAAATGTTACCAAGCTGTATCCCAAGTCCGATTGTAGCGTGTTTGATGCATTTGGTAGGGTATACAGTGGCAAGATTCAGACAGGACAGTCAGTGCGAGTATTGGGAGAAGGGTATTCACCTGACGATGAGGAGGACATGACAGTCAAAGAAGTAACGAAGCTGTGGCTTTACCAAGCACGAGATAGGATACCTATAGCTGAAGCTCCTCCTGGTACTTGGGTTCTCATTGAAGGTGTGGATGCTTCCATAATGAAAACTGCCACTCTGTGTAATGAGAGTTATGACGAGGATGTATACATATTCCGTCCTCTTCAGTTCAATACACTGCCAGTGGTGAAAACGGCAACTGAGCCTCTAAATCCCAGTGAGTTGCCAAAAATGGTGGAGGGTCTTAGAAAGATCAGCAAGAGTTATCCTCTTGCCATCACCAAAGTTGAGGAGTCTGGGGAGCACACAATCTTAGGTACAGGAGAACTGTACTTGGATTCCATCATGAAGGACCTCAGAGAGCTCTACTCCGAAGTAGAAGTCAAGGTTGCAGATCCTGTTGTTTCATTCTGCGAAACAGTTGTGGAATCTTCATCTATGAAGTGCTTTGCTGAAACACCAAACAAGAAGAATAAAATTACTATGATTGCAGAGCCATTAGAGAGAGGACTTGCGGAGGACATTGAGAAAGGTGTTGTAAGCATTGATTGGTCTAGGAGAGATATAGGTAATTTCTTCCAGACTAGGTATGAGTGGGATGTTCTTGCTGCACGGTCCATATGGGCATTCGGTCCTGATAAGCAGGGACCCAACATACTACTTGATGACACACTTTCAAGCGAAGTTGACAAGAGCTTGCTGAATGCTGTGAAAGACTCCATTGTGCAAGGGTTTCAGTGGGGTGCTCGAGAAGGACCTCTGTGCGATGAACCCATCAGAAATGTTAAGTTCAAGATAGTTGATGCAAGGATTGCACCTGAGCCATTGCATCGTGGATCTGGTCAAATCATTCCCACATCTCGACGTGTGGCCTATTCATCTTTCCTAATGGCAACCCCACGGCTCATGGAGCCAGTATATTATGTGGAGATACAAACGCCAATCGACTGTATATCTGCAATCTACACTGTTTTATCTCGCAGGCGTGGACATGTTACAGCCGATGTTCCTCAACCTGGGACCCCAGCTTACATCGTTAAGGCATTTTTACCCGTCATAGAATCGTTTGGTTTTGAGACGGACTTGAGGTACCATACTCAAGGACAGGCTTTTTGCCTCTCAGTCTTTGATCATTGGGCTATAGTTCCTGGGGATCCTCTTGACAAGAGTATTGTTCTGCGACCACTTGAACCCGCACCGATTCAGCACCTGGCTCGTGAATTTATGGTCAAGACAAGGCGTAGAAAGGGAATGAGCGAGGATGTGAGCATCAGCAAATTTTTTGATGAGGCCATGATGGTGGAACTGGCTCAGCAGGAAGCTGATATTCACCAGCAAATGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005730 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0007275 GO:0008150 GO:0009506 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0010154 GO:0015030 GO:0016020 GO:0016604 GO:0016607 GO:0022414 GO:0030054 GO:0030312 GO:0030532 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043900 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045694 GO:0046540 GO:0048316 GO:0048367 GO:0048437 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0070013 GO:0071007 GO:0071013 GO:0071944 GO:0090567 GO:0097525 GO:0097526 GO:0099402 GO:0120114 GO:1902494 GO:1990904 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

EFG_C EFG_IV EFTUD2 GTP_EFTU GTP_EFTU_D2

Protein Analysis

726

Amino Acids

81.09

Weight (kDa)

5.93

Isoelectric Point (pI)

39.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU_D2	PF03144	244 - 318	1.8e-10	Elongation factor Tu domain 2
EFG_IV	PF03764	464 - 575	7e-19	Elongation factor G, domain IV
EFG_C	PF00679	578 - 666	2.4e-22	Elongation factor G C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06220 AT1G06220 AT1G06220 AT5G25230 AT5G25230
fragaria_vesca	FvH4_2g24581 FvH4_7g03790 FvH4_7g03790 FvH4_7g03790
malus_domestica	MD02G1013600.v1.1 MD15G1160400.v1.1
prunus_persica	Prupe.3G036300_v2.0.a1
pyrus_communis	pycom02g01260 pycom15g14420
rosa_chinensis	RchiOBHm_Chr1g0327101 RchiOBHm_Chr1g0327121 RchiOBHm_Chr2g0127751
rosa_laevigata	RLG00000012029 RLG00000012030 RLG00000030043
rosa_multiflora	Rmu_sc0000795.1_g000050 Rmu_sc0004240.1_g000007
rosa_roxburghii	Rroxscaffold_4G00323330 Rroxscaffold_6G00399840 Rroxscaffold_6G00400180
rosa_rugosa	Rorug01G0063500
rosa_samantha	Rh1AG080100 Rh1AG080300 Rh1AG080700 Rh1AG080900 Rh1BG064100 Rh1CG078700 Rh1CG078800 Rh1DG085100 Rh1DG085200 Rh2AG323400 Rh2BG332600 Rh2DG350900
rosa_wichuraiana	Rw1G006400 Rw2G026250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	769, 824
Acc65I	GGTACC	1 cut(s)	1920
AccB1I	GGYRCC	1 cut(s)	1920
AccI	GTMKAC	3 cut(s)	603, 744, 978
AccII	CGCG	1 cut(s)	263
AciI	CCGC	3 cut(s)	263, 1346, 2025
AclWI	GGATC	9 cut(s)	149, 257, 273, 538, 656, 1220, 1675, 1979, 1992
AcsI	RAATTY	3 cut(s)	393, 2051, 2108
AcuI	CTGAAG	2 cut(s)	903, 980
AdeI	CACNNNGTG	1 cut(s)	951
AfaI	GTAC	7 cut(s)	71, 144, 299, 898, 1150, 1163, 1922
AfiI	CCNNNNNNNGG	5 cut(s)	115, 164, 344, 679, 1847
AflIII	ACRYGT	2 cut(s)	1696, 1822
AjiI	CACGTC	1 cut(s)	1697
AjnI	CCWGG	5 cut(s)	402, 892, 1846, 1978, 2040
Alw21I	GWGCWC	3 cut(s)	1137, 1197, 1579
Alw26I	GTCTC	1 cut(s)	1901
AlwI	GGATC	9 cut(s)	149, 257, 273, 538, 656, 1220, 1675, 1979, 1992
AlwNI	CAGNNNCTG	2 cut(s)	1229, 2041
Ama87I	CYCGRG	2 cut(s)	538, 1578
AoxI	GGCC	4 cut(s)	494, 670, 1701, 2121
ApeKI	GCWGC	5 cut(s)	6, 119, 473, 587, 1439
ApoI	RAATTY	3 cut(s)	393, 2051, 2108
ArsI	GACNNNNNNTTYG	4 cut(s)	1197, 1229, 1926, 1958
AseI	ATTAAT	1 cut(s)	102
Asp718I	GGTACC	1 cut(s)	1920
AspS9I	GGNCC	8 cut(s)	620, 671, 1183, 1446, 1463, 1478, 1586, 1851
AsuHPI	GGTGA	6 cut(s)	418, 451, 792, 1030, 1102, 2153
AvaI	CYCGRG	2 cut(s)	538, 1578
AvaII	GGWCC	7 cut(s)	620, 1183, 1446, 1463, 1478, 1586, 1851
AxyI	CCTNAGG	1 cut(s)	309
BaeI	ACNNNNGTAYC	2 cut(s)	888, 921
BamHI	GGATCC	1 cut(s)	1984
BanI	GGYRCC	1 cut(s)	1920
BanII	GRGCYC	1 cut(s)	1197
BauI	CACGAG	2 cut(s)	861, 2046
Bbv12I	GWGCWC	3 cut(s)	1137, 1197, 1579
BbvI	GCAGC	4 cut(s)	106, 485, 574, 1426
BccI	CCATC	6 cut(s)	192, 673, 1115, 1181, 1613, 2122
BceAI	ACGGC	3 cut(s)	132, 1041, 1748
BcgI	CGANNNNNNTGC	4 cut(s)	183, 217, 2027, 2061
BciT130I	CCWGG	5 cut(s)	404, 894, 1848, 1980, 2042
BciVI	GTATCC	2 cut(s)	711, 864
BclI	TGATCA	1 cut(s)	1960
BcoDI	GTCTC	1 cut(s)	1901
BfaI	CTAG	2 cut(s)	1386, 1416
BfmI	CTRYAG	3 cut(s)	192, 876, 1971
BfuI	GTATCC	2 cut(s)	711, 864
BisI	GCNGC	5 cut(s)	7, 120, 474, 588, 1440
BlpI	GCTNAGC	1 cut(s)	2142
BlsI	GCNGC	5 cut(s)	8, 121, 475, 589, 1441
Bme1390I	CCNGG	5 cut(s)	404, 894, 1848, 1980, 2042
Bme18I	GGWCC	7 cut(s)	620, 1183, 1446, 1463, 1478, 1586, 1851
BmeT110I	CYCGRG	2 cut(s)	538, 1578
BmgBI	CACGTC	1 cut(s)	1697
BmgT120I	GGNCC	8 cut(s)	620, 671, 1183, 1446, 1463, 1478, 1586, 1851
BmiI	GGNNCC	7 cut(s)	1479, 1480, 1743, 1852, 1853, 1922, 1986
BmrFI	CCNGG	5 cut(s)	404, 894, 1848, 1980, 2042
BmrI	ACTGGG	1 cut(s)	1041
BmsI	GCATC	7 cut(s)	55, 574, 718, 913, 1624, 1669, 2109
BmuI	ACTGGG	1 cut(s)	1041
BplI	GAGNNNNNCTC	4 cut(s)	1084, 1116, 1184, 1216
Bpu10I	CCTNAGC	3 cut(s)	80, 464, 1650
Bpu1102I	GCTNAGC	1 cut(s)	2142
BpuEI	CTTGAG	2 cut(s)	1914, 1936
BsaJI	CCNNGG	5 cut(s)	59, 537, 1730, 1847, 1979
Bsc4I	CCNNNNNNNGG	5 cut(s)	115, 164, 344, 679, 1847
Bse1I	ACTGG	6 cut(s)	367, 622, 1013, 1047, 1745, 2142
Bse21I	CCTNAGG	1 cut(s)	309
Bse3DI	GCAATG	2 cut(s)	475, 1655
BseBI	CCWGG	5 cut(s)	404, 894, 1848, 1980, 2042
BseDI	CCNNGG	5 cut(s)	59, 537, 1730, 1847, 1979
BseGI	GGATG	7 cut(s)	70, 203, 304, 928, 979, 1435, 2098
BseLI	CCNNNNNNNGG	5 cut(s)	115, 164, 344, 679, 1847
BseMI	GCAATG	2 cut(s)	475, 1655
BseMII	CTCAG	7 cut(s)	300, 494, 1023, 1201, 1641, 1965, 2156
BseNI	ACTGG	6 cut(s)	367, 622, 1013, 1047, 1745, 2142
BseRI	GAGGAG	4 cut(s)	363, 827, 879, 1136
BseXI	GCAGC	4 cut(s)	106, 485, 574, 1426
BseYI	CCCAGC	1 cut(s)	1855
BsgI	GTGCAG	1 cut(s)	1425
Bsh1236I	CGCG	1 cut(s)	263
BshFI	GGCC	4 cut(s)	496, 672, 1703, 2123
BshNI	GGYRCC	1 cut(s)	1920
BsiHKAI	GWGCWC	3 cut(s)	1137, 1197, 1579
BsiHKCI	CYCGRG	2 cut(s)	538, 1578
BslFI	GGGAC	2 cut(s)	1491, 1864
BslI	CCNNNNNNNGG	5 cut(s)	115, 164, 344, 679, 1847
BsmAI	GTCTC	1 cut(s)	1901
BsmBI	CGTCTC	1 cut(s)	1901
BsmFI	GGGAC	2 cut(s)	1491, 1864
BsmI	GAATGC	2 cut(s)	1457, 1540
BsnI	GGCC	4 cut(s)	496, 672, 1703, 2123
BsoBI	CYCGRG	2 cut(s)	538, 1578
Bsp1286I	GDGCHC	3 cut(s)	1137, 1197, 1579
Bsp1407I	TGTACA	1 cut(s)	142
Bsp1720I	GCTNAGC	1 cut(s)	2142
BspACI	CCGC	3 cut(s)	263, 1346, 2025
BspANI	GGCC	4 cut(s)	496, 672, 1703, 2123
BspCNI	CTCAG	7 cut(s)	301, 495, 1024, 1200, 1642, 1964, 2155
BspFNI	CGCG	1 cut(s)	263
BspHI	TCATGA	1 cut(s)	1176
BspLI	GGNNCC	7 cut(s)	1479, 1480, 1743, 1852, 1853, 1922, 1986
BspMAI	CTGCAG	1 cut(s)	196
BspPI	GGATC	9 cut(s)	149, 257, 273, 538, 656, 1220, 1675, 1979, 1992
BspT107I	GGYRCC	1 cut(s)	1920
BsrDI	GCAATG	2 cut(s)	475, 1655
BsrGI	TGTACA	1 cut(s)	142
BsrI	ACTGG	6 cut(s)	367, 622, 1013, 1047, 1745, 2142
BssECI	CCNNGG	5 cut(s)	59, 537, 1730, 1847, 1979
BssNAI	GTATAC	2 cut(s)	745, 979
BssSI	CACGAG	2 cut(s)	861, 2046
BssT1I	CCWWGG	1 cut(s)	59
Bst1107I	GTATAC	2 cut(s)	745, 979
Bst2BI	CACGAG	2 cut(s)	861, 2046
Bst2UI	CCWGG	5 cut(s)	404, 894, 1848, 1980, 2042
Bst4CI	ACNGT	8 cut(s)	749, 771, 826, 1161, 1252, 1446, 1781, 1801
Bst6I	CTCTTC	2 cut(s)	130, 999
BstAPI	GCANNNNNTGC	2 cut(s)	443, 1643
BstAUI	TGTACA	1 cut(s)	142
BstC8I	GCNNGC	2 cut(s)	1529, 1814
BstDSI	CCRYGG	1 cut(s)	1730
BstF5I	GGATG	7 cut(s)	70, 203, 304, 928, 979, 1435, 2098
BstFNI	CGCG	1 cut(s)	263
BstMAI	GTCTC	1 cut(s)	1901
BstMWI	GCNNNNNNNGC	4 cut(s)	260, 443, 1643, 1741
BstNI	CCWGG	5 cut(s)	404, 894, 1848, 1980, 2042
BstNSI	RCATGY	1 cut(s)	1826
BstSCI	CCNGG	5 cut(s)	402, 892, 1846, 1978, 2040
BstSFI	CTRYAG	3 cut(s)	192, 876, 1971
BstUI	CGCG	1 cut(s)	263
BstV1I	GCAGC	4 cut(s)	106, 485, 574, 1426
BstX2I	RGATCY	4 cut(s)	530, 1225, 1667, 1984
BstXI	CCANNNNNNTGG	2 cut(s)	410, 2131
BstYI	RGATCY	4 cut(s)	530, 1225, 1667, 1984
BstZ17I	GTATAC	2 cut(s)	745, 979
Bsu36I	CCTNAGG	1 cut(s)	309
BsuI	GTATCC	2 cut(s)	711, 864
BsuRI	GGCC	4 cut(s)	496, 672, 1703, 2123
BtgI	CCRYGG	1 cut(s)	1730
BtgZI	GCGATG	1 cut(s)	1611
BtrI	CACGTC	1 cut(s)	1697
BtsCI	GGATG	7 cut(s)	70, 203, 304, 928, 979, 1435, 2098
BtsI	GCAGTG	1 cut(s)	1007
BtsIMutI	CAGTG	8 cut(s)	546, 754, 780, 1007, 1020, 1054, 1574, 1797
Cac8I	GCNNGC	2 cut(s)	1529, 1814
CaiI	CAGNNNCTG	2 cut(s)	1229, 2041
CciI	TCATGA	1 cut(s)	1176
Cfr13I	GGNCC	8 cut(s)	620, 671, 1183, 1446, 1463, 1478, 1586, 1851
CseI	GACGC	1 cut(s)	269
Csp6I	GTAC	7 cut(s)	70, 143, 298, 897, 1149, 1162, 1921
CspCI	CAANNNNNGTGG	2 cut(s)	1047, 1082
CviAII	CATG	8 cut(s)	140, 245, 649, 820, 1177, 1738, 1823, 2125
CviQI	GTAC	7 cut(s)	70, 143, 298, 897, 1149, 1162, 1921
DraIII	CACNNNGTG	1 cut(s)	951
DrdI	GACNNNNNNGTC	2 cut(s)	769, 824
DseDI	GACNNNNNNGTC	2 cut(s)	769, 824
Eam1104I	CTCTTC	2 cut(s)	130, 999
EarI	CTCTTC	2 cut(s)	130, 999
Ecl136II	GAGCTC	1 cut(s)	1195
Eco130I	CCWWGG	1 cut(s)	59
Eco147I	AGGCCT	1 cut(s)	496
Eco24I	GRGCYC	1 cut(s)	1197
Eco47I	GGWCC	7 cut(s)	620, 1183, 1446, 1463, 1478, 1586, 1851
Eco53kI	GAGCTC	1 cut(s)	1195
Eco57I	CTGAAG	2 cut(s)	903, 980
Eco81I	CCTNAGG	1 cut(s)	309
Eco88I	CYCGRG	2 cut(s)	538, 1578
EcoICRI	GAGCTC	1 cut(s)	1195
EcoO109I	RGGNCCY	4 cut(s)	1183, 1478, 1586, 1851
EcoRII	CCWGG	5 cut(s)	402, 892, 1846, 1978, 2040
EcoT14I	CCWWGG	1 cut(s)	59
EcoT22I	ATGCAT	1 cut(s)	733
EcoT38I	GRGCYC	1 cut(s)	1197
ErhI	CCWWGG	1 cut(s)	59
Esp3I	CGTCTC	1 cut(s)	1901
FaeI	CATG	8 cut(s)	143, 248, 652, 823, 1180, 1741, 1826, 2128
FaqI	GGGAC	2 cut(s)	1491, 1864
FatI	CATG	8 cut(s)	139, 244, 648, 819, 1176, 1737, 1822, 2124
FauI	CCCGC	1 cut(s)	2032
FauNDI	CATATG	1 cut(s)	1451
FbaI	TGATCA	1 cut(s)	1960
FblI	GTMKAC	3 cut(s)	603, 744, 978
Fnu4HI	GCNGC	5 cut(s)	7, 120, 474, 588, 1440
FokI	GGATG	7 cut(s)	77, 210, 291, 935, 986, 1442, 2105
FriOI	GRGCYC	1 cut(s)	1197
Fsp4HI	GCNGC	5 cut(s)	7, 120, 474, 588, 1440
FspBI	CTAG	2 cut(s)	1386, 1416
GluI	GCNGC	5 cut(s)	7, 120, 474, 588, 1440
GsaI	CCCAGC	1 cut(s)	1859
HaeIII	GGCC	4 cut(s)	496, 672, 1703, 2123
HgaI	GACGC	1 cut(s)	269
Hin1II	CATG	8 cut(s)	143, 248, 652, 823, 1180, 1741, 1826, 2128
HincII	GTYRAC	3 cut(s)	28, 604, 1519
HindII	GTYRAC	3 cut(s)	28, 604, 1519
HindIII	AAGCTT	2 cut(s)	77, 239
HinfI	GANTC	8 cut(s)	629, 757, 1124, 1169, 1259, 1547, 1892, 2032
HphI	GGTGA	6 cut(s)	418, 451, 792, 1030, 1102, 2153
Hpy166II	GTNNAC	7 cut(s)	28, 207, 604, 745, 979, 1519, 1820
Hpy188I	TCNGA	5 cut(s)	712, 762, 1190, 1204, 1610
Hpy8I	GTNNAC	7 cut(s)	28, 207, 604, 745, 979, 1519, 1820
Hpy99I	CGWCG	1 cut(s)	1698
HpyAV	CCTTC	5 cut(s)	582, 785, 908, 1174, 1577
HpyCH4III	ACNGT	8 cut(s)	749, 771, 826, 1161, 1252, 1446, 1781, 1801
HpyCH4IV	ACGT	3 cut(s)	171, 209, 1696
HpyF10VI	GCNNNNNNNGC	4 cut(s)	260, 443, 1643, 1741
HpySE526I	ACGT	3 cut(s)	171, 209, 1696
Hsp92II	CATG	8 cut(s)	143, 248, 652, 823, 1180, 1741, 1826, 2128
KflI	GGGWCCC	2 cut(s)	1478, 1851
KpnI	GGTACC	1 cut(s)	1924
Ksp22I	TGATCA	1 cut(s)	1960
LmnI	GCTCC	3 cut(s)	892, 1132, 1741
Lsp1109I	GCAGC	4 cut(s)	106, 485, 574, 1426
LweI	GCATC	7 cut(s)	55, 574, 718, 913, 1624, 1669, 2109
MaeI	CTAG	2 cut(s)	1386, 1416
MaeII	ACGT	3 cut(s)	171, 209, 1696
MaeIII	GTNAC	4 cut(s)	457, 688, 835, 1825
MboII	GAAGA	5 cut(s)	117, 986, 1254, 1312, 1399
MflI	RGATCY	4 cut(s)	530, 1225, 1667, 1984
MhlI	GDGCHC	3 cut(s)	1137, 1197, 1579
MluCI	AATT	7 cut(s)	50, 393, 482, 1308, 1402, 2051, 2108
MlyI	GAGTC	3 cut(s)	623, 1133, 1541
Mph1103I	ATGCAT	1 cut(s)	733
MseI	TTAA	5 cut(s)	48, 102, 237, 1617, 1869
MslI	CAYNNNNRTG	2 cut(s)	551, 2129
MspR9I	CCNGG	5 cut(s)	404, 894, 1848, 1980, 2042
Mva1269I	GAATGC	2 cut(s)	1457, 1540
MvaI	CCWGG	5 cut(s)	404, 894, 1848, 1980, 2042
MvnI	CGCG	1 cut(s)	263
MwoI	GCNNNNNNNGC	4 cut(s)	260, 443, 1643, 1741
NdeI	CATATG	1 cut(s)	1451
NlaIII	CATG	8 cut(s)	143, 248, 652, 823, 1180, 1741, 1826, 2128
NlaIV	GGNNCC	7 cut(s)	1479, 1480, 1743, 1852, 1853, 1922, 1986
NmuCI	GTSAC	1 cut(s)	457
NsiI	ATGCAT	1 cut(s)	733
NspI	RCATGY	1 cut(s)	1826
PaeR7I	CTCGAG	1 cut(s)	1578
PagI	TCATGA	1 cut(s)	1176
PceI	AGGCCT	1 cut(s)	496
PciI	ACATGT	1 cut(s)	1822
PctI	GAATGC	2 cut(s)	1457, 1540
PfeI	GAWTC	5 cut(s)	757, 1169, 1259, 1892, 2032
PkrI	GCNGC	5 cut(s)	8, 121, 475, 589, 1441
PleI	GAGTC	3 cut(s)	623, 1132, 1541
PpsI	GAGTC	3 cut(s)	623, 1132, 1541
PpuMI	RGGWCCY	4 cut(s)	1183, 1478, 1586, 1851
PscI	ACATGT	1 cut(s)	1822
PshBI	ATTAAT	1 cut(s)	102
Psp124BI	GAGCTC	1 cut(s)	1197
Psp5II	RGGWCCY	4 cut(s)	1183, 1478, 1586, 1851
Psp6I	CCWGG	5 cut(s)	402, 892, 1846, 1978, 2040
PspFI	CCCAGC	1 cut(s)	1855
PspGI	CCWGG	5 cut(s)	402, 892, 1846, 1978, 2040
PspN4I	GGNNCC	7 cut(s)	1479, 1480, 1743, 1852, 1853, 1922, 1986
PspPI	GGNCC	8 cut(s)	620, 671, 1183, 1446, 1463, 1478, 1586, 1851
PspPPI	RGGWCCY	4 cut(s)	1183, 1478, 1586, 1851
PstI	CTGCAG	1 cut(s)	196
PstNI	CAGNNNCTG	2 cut(s)	1229, 2041
PsuI	RGATCY	4 cut(s)	530, 1225, 1667, 1984
RsaI	GTAC	7 cut(s)	71, 144, 299, 898, 1150, 1163, 1922
RsaNI	GTAC	7 cut(s)	70, 143, 298, 897, 1149, 1162, 1921
RseI	CAYNNNNRTG	2 cut(s)	551, 2129
SacI	GAGCTC	1 cut(s)	1197
SalI	GTCGAC	1 cut(s)	602
SaqAI	TTAA	5 cut(s)	48, 102, 237, 1617, 1869
SatI	GCNGC	5 cut(s)	7, 120, 474, 588, 1440
Sau96I	GGNCC	8 cut(s)	620, 671, 1183, 1446, 1463, 1478, 1586, 1851
SchI	GAGTC	3 cut(s)	623, 1133, 1541
ScrFI	CCNGG	5 cut(s)	404, 894, 1848, 1980, 2042
SduI	GDGCHC	3 cut(s)	1137, 1197, 1579
SfaNI	GCATC	7 cut(s)	55, 574, 718, 913, 1624, 1669, 2109
SfcI	CTRYAG	3 cut(s)	192, 876, 1971
Sfr274I	CTCGAG	1 cut(s)	1578
SinI	GGWCC	7 cut(s)	620, 1183, 1446, 1463, 1478, 1586, 1851
SlaI	CTCGAG	1 cut(s)	1578
SmiMI	CAYNNNNRTG	2 cut(s)	551, 2129
SmlI	CTYRAG	3 cut(s)	1578, 1915, 1929
SmoI	CTYRAG	3 cut(s)	1578, 1915, 1929
Sse9I	AATT	7 cut(s)	50, 393, 482, 1308, 1402, 2051, 2108
SseBI	AGGCCT	1 cut(s)	496
SsiI	CCGC	3 cut(s)	263, 1346, 2025
SspMI	CTAG	2 cut(s)	1386, 1416
SstI	GAGCTC	1 cut(s)	1197
StuI	AGGCCT	1 cut(s)	496
StyD4I	CCNGG	5 cut(s)	402, 892, 1846, 1978, 2040
StyI	CCWWGG	1 cut(s)	59
TaaI	ACNGT	8 cut(s)	749, 771, 826, 1161, 1252, 1446, 1781, 1801
TaiI	ACGT	3 cut(s)	174, 212, 1699
TaqI	TCGA	4 cut(s)	603, 1579, 1693, 1776
TaqII	GACCGA	1 cut(s)	1451
TasI	AATT	7 cut(s)	50, 393, 482, 1308, 1402, 2051, 2108
TatI	WGTACW	3 cut(s)	142, 297, 1161
TfiI	GAWTC	5 cut(s)	757, 1169, 1259, 1892, 2032
Tru1I	TTAA	5 cut(s)	48, 102, 237, 1617, 1869
Tru9I	TTAA	5 cut(s)	48, 102, 237, 1617, 1869
TscAI	CASTG	8 cut(s)	553, 754, 780, 1014, 1020, 1054, 1574, 1804
TseFI	GTSAC	1 cut(s)	457
TseI	GCWGC	5 cut(s)	6, 119, 473, 587, 1439
Tsp45I	GTSAC	1 cut(s)	457
TspGWI	ACGGA	2 cut(s)	977, 1925
TspRI	CASTG	8 cut(s)	553, 754, 780, 1014, 1020, 1054, 1574, 1804
VpaK11BI	GGWCC	7 cut(s)	620, 1183, 1446, 1463, 1478, 1586, 1851
VspI	ATTAAT	1 cut(s)	102
XapI	RAATTY	3 cut(s)	393, 2051, 2108
XceI	RCATGY	1 cut(s)	1826
XcmI	CCANNNNNNNNNTGG	1 cut(s)	614
XhoI	CTCGAG	1 cut(s)	1578
XmiI	GTMKAC	3 cut(s)	603, 744, 978
XspI	CTAG	2 cut(s)	1386, 1416
Zsp2I	ATGCAT	1 cut(s)	733

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.