116 kDa U5 small nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06220 AT1G06220 AT1G06220 AT5G25230 AT5G25230 |
| fragaria_vesca | FvH4_2g24581 FvH4_7g03790 FvH4_7g03790 FvH4_7g03790 |
| malus_domestica | MD02G1013600.v1.1 MD15G1160400.v1.1 |
| prunus_persica | Prupe.3G036300_v2.0.a1 |
| pyrus_communis | pycom02g01260 pycom15g14420 |
| rosa_chinensis | RchiOBHm_Chr1g0327101 RchiOBHm_Chr1g0327121 RchiOBHm_Chr2g0127751 |
| rosa_laevigata | RLG00000012029 RLG00000012030 RLG00000030043 |
| rosa_multiflora | Rmu_sc0000795.1_g000050 Rmu_sc0004240.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00323330 Rroxscaffold_6G00399840 Rroxscaffold_6G00400180 |
| rosa_rugosa | Rorug01G0063500 |
| rosa_samantha | Rh1AG080100 Rh1AG080300 Rh1AG080700 Rh1AG080900 Rh1BG064100 Rh1CG078700 Rh1CG078800 Rh1DG085100 Rh1DG085200 Rh2AG323400 Rh2BG332600 Rh2DG350900 |
| rosa_wichuraiana | Rw1G006400 Rw2G026250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 200 |
| AccII | CGCG | 1 cut(s) | 51 |
| AciI | CCGC | 2 cut(s) | 5, 51 |
| AcsI | RAATTY | 1 cut(s) | 91 |
| AcuI | CTGAAG | 1 cut(s) | 58 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 17, 128 |
| AgsI | TTSAA | 3 cut(s) | 26, 227, 264 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 320, 352 |
| AluBI | AGCT | 3 cut(s) | 39, 134, 183 |
| AluI | AGCT | 3 cut(s) | 39, 134, 183 |
| AoxI | GGCC | 1 cut(s) | 141 |
| ApoI | RAATTY | 1 cut(s) | 91 |
| AspLEI | GCGC | 1 cut(s) | 51 |
| AspS9I | GGNCC | 1 cut(s) | 141 |
| AsuC2I | CCSGG | 1 cut(s) | 123 |
| AsuNHI | GCTAGC | 1 cut(s) | 290 |
| BccI | CCATC | 1 cut(s) | 94 |
| BceAI | ACGGC | 1 cut(s) | 176 |
| BcnI | CCSGG | 1 cut(s) | 123 |
| BfaI | CTAG | 1 cut(s) | 291 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 1 cut(s) | 123 |
| BmgT120I | GGNCC | 1 cut(s) | 141 |
| BmrFI | CCNGG | 1 cut(s) | 123 |
| BmtI | GCTAGC | 1 cut(s) | 294 |
| BpmI | CTGGAG | 1 cut(s) | 150 |
| BpuMI | CCSGG | 1 cut(s) | 123 |
| BsaJI | CCNNGG | 1 cut(s) | 270 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 17, 128 |
| Bse1I | ACTGG | 1 cut(s) | 151 |
| BseDI | CCNNGG | 1 cut(s) | 270 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 17, 128 |
| BseNI | ACTGG | 1 cut(s) | 151 |
| Bsh1236I | CGCG | 1 cut(s) | 51 |
| BshFI | GGCC | 1 cut(s) | 143 |
| BsiSI | CCGG | 2 cut(s) | 122, 312 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 17, 128 |
| BsnI | GGCC | 1 cut(s) | 143 |
| BspACI | CCGC | 2 cut(s) | 5, 51 |
| BspANI | GGCC | 1 cut(s) | 143 |
| BspFNI | CGCG | 1 cut(s) | 51 |
| BspOI | GCTAGC | 1 cut(s) | 294 |
| BsrI | ACTGG | 1 cut(s) | 151 |
| BssECI | CCNNGG | 1 cut(s) | 270 |
| Bst4CI | ACNGT | 1 cut(s) | 260 |
| BstC8I | GCNNGC | 2 cut(s) | 70, 292 |
| BstDEI | CTNAG | 1 cut(s) | 187 |
| BstFNI | CGCG | 1 cut(s) | 51 |
| BstHHI | GCGC | 1 cut(s) | 51 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 140 |
| BstSCI | CCNGG | 1 cut(s) | 121 |
| BstUI | CGCG | 1 cut(s) | 51 |
| BsuRI | GGCC | 1 cut(s) | 143 |
| BtsIMutI | CAGTG | 1 cut(s) | 144 |
| Cac8I | GCNNGC | 2 cut(s) | 70, 292 |
| CfoI | GCGC | 1 cut(s) | 51 |
| Cfr13I | GGNCC | 1 cut(s) | 141 |
| CviAII | CATG | 2 cut(s) | 170, 287 |
| CviJI | RGCY | 9 cut(s) | 39, 72, 134, 143, 183, 191, 239, 269, 341 |
| CviKI_1 | RGCY | 9 cut(s) | 39, 72, 134, 143, 183, 191, 239, 269, 341 |
| DdeI | CTNAG | 1 cut(s) | 187 |
| Eco57I | CTGAAG | 1 cut(s) | 58 |
| FaeI | CATG | 2 cut(s) | 173, 290 |
| FaiI | YATR | 7 cut(s) | 113, 171, 200, 251, 288, 296, 351 |
| FatI | CATG | 2 cut(s) | 169, 286 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| FspBI | CTAG | 1 cut(s) | 291 |
| GlaI | GCGC | 1 cut(s) | 50 |
| GluI | GCNGC | 1 cut(s) | 5 |
| GsuI | CTGGAG | 1 cut(s) | 150 |
| HaeIII | GGCC | 1 cut(s) | 143 |
| HapII | CCGG | 2 cut(s) | 122, 312 |
| HhaI | GCGC | 1 cut(s) | 51 |
| Hin1II | CATG | 2 cut(s) | 173, 290 |
| Hin6I | GCGC | 1 cut(s) | 49 |
| HinP1I | GCGC | 1 cut(s) | 49 |
| HpaII | CCGG | 2 cut(s) | 122, 312 |
| Hpy188I | TCNGA | 1 cut(s) | 77 |
| Hpy188III | TCNNGA | 1 cut(s) | 264 |
| HpyCH4III | ACNGT | 1 cut(s) | 260 |
| HpyCH4V | TGCA | 2 cut(s) | 111, 255 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 140 |
| HpyF3I | CTNAG | 1 cut(s) | 187 |
| Hsp92II | CATG | 2 cut(s) | 173, 290 |
| HspAI | GCGC | 1 cut(s) | 49 |
| LmnI | GCTCC | 2 cut(s) | 86, 131 |
| MaeI | CTAG | 1 cut(s) | 291 |
| MboII | GAAGA | 2 cut(s) | 34, 254 |
| MluCI | AATT | 2 cut(s) | 91, 201 |
| MnlI | CCTC | 2 cut(s) | 265, 274 |
| MseI | TTAA | 1 cut(s) | 156 |
| MspI | CCGG | 2 cut(s) | 122, 312 |
| MspR9I | CCNGG | 1 cut(s) | 123 |
| MvnI | CGCG | 1 cut(s) | 51 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 140 |
| NciI | CCSGG | 1 cut(s) | 123 |
| NheI | GCTAGC | 1 cut(s) | 290 |
| NlaIII | CATG | 2 cut(s) | 173, 290 |
| NmeAIII | GCCGAG | 1 cut(s) | 295 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| PsiI | TTATAA | 1 cut(s) | 200 |
| PspPI | GGNCC | 1 cut(s) | 141 |
| SaqAI | TTAA | 1 cut(s) | 156 |
| SatI | GCNGC | 1 cut(s) | 5 |
| Sau96I | GGNCC | 1 cut(s) | 141 |
| ScrFI | CCNGG | 1 cut(s) | 123 |
| SetI | ASST | 3 cut(s) | 41, 136, 185 |
| Sse9I | AATT | 2 cut(s) | 91, 201 |
| SsiI | CCGC | 2 cut(s) | 5, 51 |
| SspMI | CTAG | 1 cut(s) | 291 |
| StyD4I | CCNGG | 1 cut(s) | 121 |
| TaaI | ACNGT | 1 cut(s) | 260 |
| TaqI | TCGA | 2 cut(s) | 45, 305 |
| TaqII | GACCGA | 1 cut(s) | 198 |
| TasI | AATT | 2 cut(s) | 91, 201 |
| TauI | GCSGC | 1 cut(s) | 7 |
| Tru1I | TTAA | 1 cut(s) | 156 |
| Tru9I | TTAA | 1 cut(s) | 156 |
| TscAI | CASTG | 1 cut(s) | 151 |
| TspRI | CASTG | 1 cut(s) | 151 |
| XapI | RAATTY | 1 cut(s) | 91 |
| XspI | CTAG | 1 cut(s) | 291 |