Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003263

Physical Location & Seq

Genomic Coordinates Forward (+)

9616811 .. 9619721

Gene Structure 2911 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ47177

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGGGGGGGGCGGCTGTTCTCGTAGCCATTGCTGCTGCAATAGGAAACTTTCTACAAGGTTGGGACAATGCAACCATTGCAGGGGCTGTTCTTTATATTAAAAAGGAATTTAAATTGGAAACTCAACCAAAAATTGAAGGGTTGATTGTAGCAATGTCACTGATTGGAGCCACAGTGATCACAACATTTTCGGGGCCAGTATCGGACTCAATCGGAAGGCGTCCCATGCTGATAATCTCATCAGTTCTATATTTTCTCAGCAGTTTGGTAATGGTATGGTCACCCAATGTGTATGTGCTTCTCTTGGCACGGCTGTTAGATGGTTTTGGGATTGGCCTAGCTGTTACTCTTGTCCCGGTCTACATTTCCGAGACATCCCCGCCCGAGATCAGAGGACTACTGAACACTTTCCCACAGTTTACTGGCACTATTGGGATGTTCTTTTCATACTGTATGGTGTTTTCAATGTCATTGAAGGAAGCACCCAATTGGAGGTTAATGCTTGGAGTTCTTTCCATCCCATCTCTGCTTTACTTCGCATTCACTGTGCTTTATCTGCCTGAGTCTCCAAGGTGGCTGGTTAGTAAAGGGCGAATGGCCGAGGCGAAGAACGTTTTGCAAAAACTACGAAGCAGGGAAGATGTTTCAGGTGAGTTGGCTTTGCTGGTCGAGGGTCTTGGAGTTGGAGGGGATACATCATTAGAAGAGTACATAATTGGTCCGGCCAATGATCCGGATGGCCGTGAAGCAGCTCCAGAGAAGGATCAAATAAAGCTATATGGACCGGAGGAGGGACGAGCCTCATTGATTGCGAGATCAGTCACAGGACAGGCCAATTTCGGCTTGCCGTCACGCCAAGGAAGCATACTGAATCCAAACGGGCCTTATGTGGATCCTCTTGTAAACCTATTTGGTAGTGTCCATGAGAAGCTTTTACCTGAGGGCTCAGGAAGTATGCGTAGCCTTCTCAATTTGCCAAACATGGGGAGCCTGCTAAATGTGGCACCACCACATGAGCAGGACAAAACTGATCATTGGGATTTGGAGCACGGAGATGATTCTGAGGACAATGCACGAAAGCCATTGCTTGCGAGTAGACATACAGCCAGTATGGCAAATGACATGCTTCCTGGGAAATCTACCAGCTTCGTGGGAGGCATGAAGAGGCGAAATAGCCTCCTCATGCCGGGAGCTGGTGGCGAAGCAGTGAGTAGTATGGACATTGGTGGTGGCTGGCAGTTGGCTTATAAATACTCCGAGCGCGTTGACAAAGATGGGAAGAAGACAGAAGAGTGTCAAAGGGTTTATTTGCACCAGGAGGGTGCACTTGATCAATCTCGCCGTGGCTCAATGATTGGCTCAATGCGCGGCGGCTCTATGCTCTCAGTTGCTGGTGATGGTGATACACCTCTGGAATGTGAATATTTTCAGGCTTCTGCTCTTGTTAGCCAACCTTCTATAATTACCAAAAATCAAATGAGCCGGGATGGACCACCAAAGCTTGGCCCTCAAGAAACTGCTGTCCAAGGATCCAGTTGGTCTGATCTTTTGGAACCCGGAGTCAAGAGTGCATTGTTTGTTGGCGTAGCAATTCAAGTTCTTCAGCAGTTCTCTGGCATAAATGGGGTTCTTTACTACACTCCCCAAATTCTTGAGCAAGCAGGAGTTGCAGTTCTCTTATCAAATTTGGGTCTCAGTTCCACCTCAGCTTCTATTCTCATAAGTGCTCTCACAACCCTATTGATGCTTCCATCTGTAGGCGTTGCCATGAGACTAATGGATGTCGCGGGCAGAAGGTCACTCTTGCTGAGCACATTACCAGTCCTAACAGGAACACTCCTACTACTAATTTTCAGCCAACTTGTCAACATGGGTTCTGTTGTTAATGCCACAATTTCCACCATCAGTGTGGTGCTCTACTTTTGCACCTTTGTCATGGCTTTCGGACCAATTCCCAACATTCTCTGCTCTGAGATCTTCCCAACTCGAGTTCGAGGAGTCTGTATTGCAATATGTGCTCTCACGTTTTGGATAGGAGACATCATCGTCACTTACTCACTGCCTATTCTGCTCACCTCTATGGGTCTCGCCGGTGTCTTTGCCATCTATGCTGTTGTGTGCGCCCTTTCTTGGGTGTTTGTTTTCTTGAAGGTTCCAGAAACAAAGGGAATGCCCTTAGAAGTCATCTCTGAGTTCTTTGCAGTTGGTGCAAAGCAAGCTGAAATTGCAGAAAGAATTAGTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

748

Amino Acids

80.2

Weight (kDa)

5.46

Isoelectric Point (pI)

42.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	8 - 223	8.1e-53	Sugar (and other) transporter
MFS_1	PF07690	13 - 205	6.1e-23	Major Facilitator Superfamily
Sugar_tr	PF00083	510 - 733	1.1e-40	Sugar (and other) transporter
MFS_1	PF07690	558 - 722	8.3e-09	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003263)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g10110
malus_domestica	MD02G1109100.v1.1 MD02G1109500.v1.1 MD15G1228300.v1.1
prunus_persica	Prupe.7G186000_v2.0.a1
pyrus_communis	pycom15g20340
rosa_chinensis	RchiOBHm_Chr1g0348791 RchiOBHm_Chr2g0096881 RchiOBHm_Chr2g0147991 RchiOBHm_Chr4g0410581 RchiOBHm_Chr7g0216381
rosa_laevigata	RLG00000016678
rosa_multiflora	Rmu_sc0000692.1_g000002 Rmu_sc0003743.1_g000031 Rmu_sc0007264.1_g000009 Rmu_sc0007806.1_g000019 Rmu_ssc0000215.1_g000006 Rmu_ssc0000433.1_g000003
rosa_roxburghii	Rroxscaffold_2G00145190
rosa_rugosa	Rorug02G0061700
rosa_samantha	Rh1AG316900 Rh2AG109400 Rh2AG598500 Rh2BG111400 Rh2CG113500 Rh2DG112500 Rh4CG174300 Rh5BG370000 Rh5DG336900 Rh5DG401500 Rh5DG401600 Rh6DG244100 Rh7DG300200
rosa_wichuraiana	Rw1G028090 Rw2G008450 Rw7G025410 Rw7G025420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1248
AasI	GACNNNNNNGTC	1 cut(s)	2045
AccB1I	GGYRCC	1 cut(s)	1003
AccB7I	CCANNNNNTGG	1 cut(s)	1502
AccI	GTMKAC	2 cut(s)	360, 1096
AccII	CGCG	3 cut(s)	1263, 1368, 1787
AccIII	TCCGGA	1 cut(s)	733
AciI	CCGC	5 cut(s)	11, 380, 1368, 1371, 1787
AclI	AACGTT	1 cut(s)	612
AclWI	GGATC	6 cut(s)	725, 771, 887, 900, 1524, 1537
AcoI	YGGCCR	3 cut(s)	597, 723, 739
AcsI	RAATTY	3 cut(s)	107, 1647, 1684
AcuI	CTGAAG	1 cut(s)	1586
AcyI	GRCGYC	1 cut(s)	220
AfaI	GTAC	1 cut(s)	710
AgsI	TTSAA	5 cut(s)	137, 465, 475, 1595, 2149
AjnI	CCWGG	2 cut(s)	1129, 1314
AloI	GAACNNNNNNTCC	2 cut(s)	1656, 1688
AluBI	AGCT	9 cut(s)	341, 752, 775, 931, 1146, 1193, 1501, 1709, 2219
AluI	AGCT	9 cut(s)	341, 752, 775, 931, 1146, 1193, 1501, 1709, 2219
Alw21I	GWGCWC	6 cut(s)	1050, 1327, 1729, 1814, 1917, 2020
Alw26I	GTCTC	6 cut(s)	365, 570, 1697, 1765, 2031, 2090
Alw44I	GTGCAC	1 cut(s)	1323
AlwI	GGATC	6 cut(s)	725, 771, 887, 900, 1524, 1537
AlwNI	CAGNNNCTG	2 cut(s)	86, 1391
Ama87I	CYCGRG	2 cut(s)	383, 1986
Aor13HI	TCCGGA	1 cut(s)	733
AoxI	GGCC	8 cut(s)	194, 334, 597, 723, 739, 831, 881, 1504
ApaLI	GTGCAC	1 cut(s)	1323
ApeKI	GCWGC	3 cut(s)	32, 35, 749
ApoI	RAATTY	3 cut(s)	107, 1647, 1684
Asp700I	GAANNNNTTC	3 cut(s)	407, 1425, 2239
AspLEI	GCGC	3 cut(s)	1263, 1368, 2123
AspS9I	GGNCC	7 cut(s)	194, 719, 782, 881, 1490, 1505, 1946
AsuC2I	CCSGG	4 cut(s)	356, 1188, 1484, 1557
AsuHPI	GGTGA	5 cut(s)	273, 662, 1406, 1412, 2065
AvaI	CYCGRG	2 cut(s)	383, 1986
AvaII	GGWCC	4 cut(s)	719, 782, 1490, 1946
AxyI	CCTNAGG	1 cut(s)	939
BaeGI	GKGCMC	1 cut(s)	1327
BamHI	GGATCC	2 cut(s)	892, 1529
BanI	GGYRCC	1 cut(s)	1003
BanII	GRGCYC	1 cut(s)	947
BbsI	GAAGAC	1 cut(s)	1289
Bbv12I	GWGCWC	6 cut(s)	1050, 1327, 1729, 1814, 1917, 2020
BbvCI	CCTCAGC	1 cut(s)	1705
BbvI	GCAGC	3 cut(s)	19, 22, 761
BceAI	ACGGC	4 cut(s)	326, 726, 832, 1326
BciT130I	CCWGG	2 cut(s)	1131, 1316
BciVI	GTATCC	1 cut(s)	685
BclI	TGATCA	3 cut(s)	177, 1030, 1330
BcnI	CCSGG	4 cut(s)	356, 1188, 1484, 1557
BcoDI	GTCTC	6 cut(s)	365, 570, 1697, 1765, 2031, 2090
BfaI	CTAG	1 cut(s)	338
BfmI	CTRYAG	1 cut(s)	1755
BfuI	GTATCC	1 cut(s)	685
BglI	GCCNNNNNGGC	1 cut(s)	1112
BglII	AGATCT	1 cut(s)	1974
BisI	GCNGC	6 cut(s)	12, 33, 36, 750, 1369, 1372
BlpI	GCTNAGC	1 cut(s)	1808
BlsI	GCNGC	6 cut(s)	13, 34, 37, 751, 1370, 1373
Bme1390I	CCNGG	6 cut(s)	356, 1131, 1188, 1316, 1484, 1557
Bme18I	GGWCC	4 cut(s)	719, 782, 1490, 1946
BmeT110I	CYCGRG	2 cut(s)	383, 1986
BmgT120I	GGNCC	7 cut(s)	194, 719, 782, 881, 1490, 1505, 1946
BmiI	GGNNCC	8 cut(s)	169, 195, 894, 989, 1005, 1531, 1554, 2154
BmrFI	CCNGG	6 cut(s)	356, 1131, 1188, 1316, 1484, 1557
BmsI	GCATC	1 cut(s)	1734
BpiI	GAAGAC	1 cut(s)	1289
BpmI	CTGGAG	1 cut(s)	738
Bpu10I	CCTNAGC	2 cut(s)	946, 1705
Bpu1102I	GCTNAGC	1 cut(s)	1808
BpuEI	CTTGAG	2 cut(s)	1494, 1673
BpuMI	CCSGG	4 cut(s)	356, 1188, 1484, 1557
BsaHI	GRCGYC	1 cut(s)	220
BsaI	GGTCTC	2 cut(s)	1697, 2090
BsaJI	CCNNGG	6 cut(s)	569, 600, 856, 1130, 1342, 1525
BsaWI	WCCGGW	2 cut(s)	733, 784
BsaXI	ACNNNNNCTCC	4 cut(s)	159, 189, 1656, 1686
Bse118I	RCCGGY	1 cut(s)	2090
Bse1I	ACTGG	5 cut(s)	197, 427, 1107, 1533, 1820
Bse21I	CCTNAGG	1 cut(s)	939
Bse3DI	GCAATG	4 cut(s)	27, 75, 159, 1082
BseAI	TCCGGA	1 cut(s)	733
BseBI	CCWGG	2 cut(s)	1131, 1316
BseDI	CCNNGG	6 cut(s)	569, 600, 856, 1130, 1342, 1525
BseGI	GGATG	6 cut(s)	374, 441, 516, 742, 1492, 1786
BseMI	GCAATG	4 cut(s)	27, 75, 159, 1082
BseNI	ACTGG	5 cut(s)	197, 427, 1107, 1533, 1820
BseRI	GAGGAG	3 cut(s)	803, 1169, 2010
BseSI	GKGCMC	1 cut(s)	1327
BseXI	GCAGC	3 cut(s)	19, 22, 761
Bsh1236I	CGCG	3 cut(s)	1263, 1368, 1787
BshFI	GGCC	8 cut(s)	196, 336, 599, 725, 741, 833, 883, 1506
BshNI	GGYRCC	1 cut(s)	1003
BsiHKAI	GWGCWC	6 cut(s)	1050, 1327, 1729, 1814, 1917, 2020
BsiHKCI	CYCGRG	2 cut(s)	383, 1986
BsiSI	CCGG	8 cut(s)	356, 722, 734, 785, 1187, 1483, 1557, 2091
BslFI	GGGAC	4 cut(s)	77, 207, 338, 807
BsmAI	GTCTC	6 cut(s)	365, 570, 1697, 1765, 2031, 2090
BsmFI	GGGAC	4 cut(s)	77, 207, 338, 807
BsmI	GAATGC	2 cut(s)	539, 2175
BsnI	GGCC	8 cut(s)	196, 336, 599, 725, 741, 833, 883, 1506
Bso31I	GGTCTC	2 cut(s)	1697, 2090
BsoBI	CYCGRG	2 cut(s)	383, 1986
Bsp1286I	GDGCHC	7 cut(s)	947, 1050, 1327, 1729, 1814, 1917, 2020
Bsp13I	TCCGGA	1 cut(s)	733
Bsp1720I	GCTNAGC	1 cut(s)	1808
BspACI	CCGC	5 cut(s)	11, 380, 1368, 1371, 1787
BspANI	GGCC	8 cut(s)	196, 336, 599, 725, 741, 833, 883, 1506
BspEI	TCCGGA	1 cut(s)	733
BspFNI	CGCG	3 cut(s)	1263, 1368, 1787
BspLI	GGNNCC	8 cut(s)	169, 195, 894, 989, 1005, 1531, 1554, 2154
BspPI	GGATC	6 cut(s)	725, 771, 887, 900, 1524, 1537
BspT107I	GGYRCC	1 cut(s)	1003
BspTNI	GGTCTC	2 cut(s)	1697, 2090
BsrDI	GCAATG	4 cut(s)	27, 75, 159, 1082
BsrFI	RCCGGY	1 cut(s)	2090
BsrI	ACTGG	5 cut(s)	197, 427, 1107, 1533, 1820
BssAI	RCCGGY	1 cut(s)	2090
BssECI	CCNNGG	6 cut(s)	569, 600, 856, 1130, 1342, 1525
BssNI	GRCGYC	1 cut(s)	220
BssT1I	CCWWGG	3 cut(s)	569, 856, 1525
Bst2UI	CCWGG	2 cut(s)	1131, 1316
Bst4CI	ACNGT	4 cut(s)	175, 417, 452, 547
Bst6I	CTCTTC	3 cut(s)	699, 1157, 1284
BstACI	GRCGYC	1 cut(s)	220
BstAPI	GCANNNNNTGC	4 cut(s)	77, 1667, 2015, 2207
BstC8I	GCNNGC	7 cut(s)	845, 992, 1089, 1235, 1659, 1789, 2217
BstDSI	CCRYGG	1 cut(s)	1342
BstEII	GGTNACC	1 cut(s)	279
BstF5I	GGATG	6 cut(s)	374, 441, 516, 742, 1492, 1786
BstFNI	CGCG	3 cut(s)	1263, 1368, 1787
BstHHI	GCGC	3 cut(s)	1263, 1368, 2123
BstMAI	GTCTC	6 cut(s)	365, 570, 1697, 1765, 2031, 2090
BstNI	CCWGG	2 cut(s)	1131, 1316
BstNSI	RCATGY	1 cut(s)	1126
BstPI	GGTNACC	1 cut(s)	279
BstSCI	CCNGG	6 cut(s)	354, 1129, 1186, 1314, 1482, 1555
BstSFI	CTRYAG	1 cut(s)	1755
BstSLI	GKGCMC	1 cut(s)	1327
BstUI	CGCG	3 cut(s)	1263, 1368, 1787
BstV1I	GCAGC	3 cut(s)	19, 22, 761
BstV2I	GAAGAC	1 cut(s)	1289
BstX2I	RGATCY	3 cut(s)	892, 1529, 1974
BstXI	CCANNNNNNTGG	2 cut(s)	1150, 1909
BstYI	RGATCY	3 cut(s)	892, 1529, 1974
Bsu36I	CCTNAGG	1 cut(s)	939
BsuI	GTATCC	1 cut(s)	685
BsuRI	GGCC	8 cut(s)	196, 336, 599, 725, 741, 833, 883, 1506
BtgI	CCRYGG	1 cut(s)	1342
BtsCI	GGATG	6 cut(s)	374, 441, 516, 742, 1492, 1786
BtsI	GCAGTG	2 cut(s)	1212, 2057
BtsIMutI	CAGTG	6 cut(s)	158, 180, 543, 1212, 1912, 2057
Cac8I	GCNNGC	7 cut(s)	845, 992, 1089, 1235, 1659, 1789, 2217
CaiI	CAGNNNCTG	2 cut(s)	86, 1391
CfoI	GCGC	3 cut(s)	1263, 1368, 2123
Cfr10I	RCCGGY	1 cut(s)	2090
Cfr13I	GGNCC	7 cut(s)	194, 719, 782, 881, 1490, 1505, 1946
CseI	GACGC	1 cut(s)	209
Csp6I	GTAC	1 cut(s)	709
CviQI	GTAC	1 cut(s)	709
DraI	TTTAAA	1 cut(s)	112
DrdI	GACNNNNNNGTC	1 cut(s)	2045
DseDI	GACNNNNNNGTC	1 cut(s)	2045
EaeI	YGGCCR	3 cut(s)	597, 723, 739
Eam1104I	CTCTTC	3 cut(s)	699, 1157, 1284
EarI	CTCTTC	3 cut(s)	699, 1157, 1284
Eco130I	CCWWGG	3 cut(s)	569, 856, 1525
Eco24I	GRGCYC	1 cut(s)	947
Eco31I	GGTCTC	2 cut(s)	1697, 2090
Eco47I	GGWCC	4 cut(s)	719, 782, 1490, 1946
Eco57I	CTGAAG	1 cut(s)	1586
Eco81I	CCTNAGG	1 cut(s)	939
Eco88I	CYCGRG	2 cut(s)	383, 1986
Eco91I	GGTNACC	1 cut(s)	279
EcoO65I	GGTNACC	1 cut(s)	279
EcoRII	CCWGG	2 cut(s)	1129, 1314
EcoT14I	CCWWGG	3 cut(s)	569, 856, 1525
EcoT38I	GRGCYC	1 cut(s)	947
ErhI	CCWWGG	3 cut(s)	569, 856, 1525
FaqI	GGGAC	4 cut(s)	77, 207, 338, 807
FauI	CCCGC	2 cut(s)	387, 1780
FbaI	TGATCA	3 cut(s)	177, 1030, 1330
FblI	GTMKAC	2 cut(s)	360, 1096
Fnu4HI	GCNGC	6 cut(s)	12, 33, 36, 750, 1369, 1372
FokI	GGATG	6 cut(s)	361, 448, 503, 749, 1499, 1793
FriOI	GRGCYC	1 cut(s)	947
Fsp4HI	GCNGC	6 cut(s)	12, 33, 36, 750, 1369, 1372
FspBI	CTAG	1 cut(s)	338
GlaI	GCGC	3 cut(s)	1262, 1367, 2122
GluI	GCNGC	6 cut(s)	12, 33, 36, 750, 1369, 1372
GsuI	CTGGAG	1 cut(s)	738
HaeIII	GGCC	8 cut(s)	196, 336, 599, 725, 741, 833, 883, 1506
HapII	CCGG	8 cut(s)	356, 722, 734, 785, 1187, 1483, 1557, 2091
HgaI	GACGC	1 cut(s)	209
HhaI	GCGC	3 cut(s)	1263, 1368, 2123
Hin1I	GRCGYC	1 cut(s)	220
Hin6I	GCGC	3 cut(s)	1261, 1366, 2121
HinP1I	GCGC	3 cut(s)	1261, 1366, 2121
HincII	GTYRAC	2 cut(s)	1267, 1867
HindII	GTYRAC	2 cut(s)	1267, 1867
HindIII	AAGCTT	2 cut(s)	929, 1499
HinfI	GANTC	6 cut(s)	206, 563, 871, 1058, 1560, 1998
HpaII	CCGG	8 cut(s)	356, 722, 734, 785, 1187, 1483, 1557, 2091
HphI	GGTGA	5 cut(s)	273, 662, 1406, 1412, 2065
Hpy166II	GTNNAC	7 cut(s)	361, 420, 904, 1097, 1267, 1325, 1867
Hpy188III	TCNNGA	9 cut(s)	734, 755, 948, 1412, 1511, 1564, 1652, 2146, 2156
Hpy8I	GTNNAC	7 cut(s)	361, 420, 904, 1097, 1267, 1325, 1867
HpyAV	CCTTC	8 cut(s)	131, 210, 469, 754, 974, 1464, 1788, 2143
HpyCH4III	ACNGT	4 cut(s)	175, 417, 452, 547
HpyCH4IV	ACGT	2 cut(s)	612, 2024
HpySE526I	ACGT	2 cut(s)	612, 2024
Hsp92I	GRCGYC	1 cut(s)	220
HspAI	GCGC	3 cut(s)	1261, 1366, 2121
Kpn2I	TCCGGA	1 cut(s)	733
Ksp22I	TGATCA	3 cut(s)	177, 1030, 1330
LmnI	GCTCC	5 cut(s)	167, 757, 987, 1045, 1190
Lsp1109I	GCAGC	3 cut(s)	19, 22, 761
LweI	GCATC	1 cut(s)	1734
MaeI	CTAG	1 cut(s)	338
MaeII	ACGT	2 cut(s)	612, 2024
MaeIII	GTNAC	7 cut(s)	156, 279, 343, 820, 849, 1797, 2047
MboII	GAAGA	9 cut(s)	619, 650, 716, 1174, 1291, 1294, 1301, 1592, 1969
MfeI	CAATTG	1 cut(s)	487
MflI	RGATCY	3 cut(s)	892, 1529, 1974
MhlI	GDGCHC	7 cut(s)	947, 1050, 1327, 1729, 1814, 1917, 2020
MlyI	GAGTC	4 cut(s)	200, 572, 1569, 2007
MmeI	TCCRAC	1 cut(s)	664
MroI	TCCGGA	1 cut(s)	733
MroXI	GAANNNNTTC	3 cut(s)	407, 1425, 2239
MseI	TTAA	5 cut(s)	99, 111, 497, 1884, 2245
MslI	CAYNNNNRTG	3 cut(s)	1053, 1907, 2078
MspI	CCGG	8 cut(s)	356, 722, 734, 785, 1187, 1483, 1557, 2091
MspR9I	CCNGG	6 cut(s)	356, 1131, 1188, 1316, 1484, 1557
MunI	CAATTG	1 cut(s)	487
Mva1269I	GAATGC	2 cut(s)	539, 2175
MvaI	CCWGG	2 cut(s)	1131, 1316
MvnI	CGCG	3 cut(s)	1263, 1368, 1787
NciI	CCSGG	4 cut(s)	356, 1188, 1484, 1557
NlaIV	GGNNCC	8 cut(s)	169, 195, 894, 989, 1005, 1531, 1554, 2154
NmeAIII	GCCGAG	1 cut(s)	625
NmuCI	GTSAC	6 cut(s)	156, 279, 820, 849, 1797, 2047
NspI	RCATGY	1 cut(s)	1126
PaeR7I	CTCGAG	1 cut(s)	1986
PctI	GAATGC	2 cut(s)	539, 2175
PdmI	GAANNNNTTC	3 cut(s)	407, 1425, 2239
PfeI	GAWTC	2 cut(s)	871, 1058
PflMI	CCANNNNNTGG	1 cut(s)	1502
PkrI	GCNGC	6 cut(s)	13, 34, 37, 751, 1370, 1373
PleI	GAGTC	4 cut(s)	200, 571, 1568, 2006
PpsI	GAGTC	4 cut(s)	200, 571, 1568, 2006
PsiI	TTATAA	1 cut(s)	1248
Psp1406I	AACGTT	1 cut(s)	612
Psp6I	CCWGG	2 cut(s)	1129, 1314
PspEI	GGTNACC	1 cut(s)	279
PspGI	CCWGG	2 cut(s)	1129, 1314
PspN4I	GGNNCC	8 cut(s)	169, 195, 894, 989, 1005, 1531, 1554, 2154
PspPI	GGNCC	7 cut(s)	194, 719, 782, 881, 1490, 1505, 1946
PspXI	VCTCGAGB	1 cut(s)	1986
PstNI	CAGNNNCTG	2 cut(s)	86, 1391
PsuI	RGATCY	3 cut(s)	892, 1529, 1974
RsaI	GTAC	1 cut(s)	710
RsaNI	GTAC	1 cut(s)	709
RseI	CAYNNNNRTG	3 cut(s)	1053, 1907, 2078
SaqAI	TTAA	5 cut(s)	99, 111, 497, 1884, 2245
SatI	GCNGC	6 cut(s)	12, 33, 36, 750, 1369, 1372
Sau96I	GGNCC	7 cut(s)	194, 719, 782, 881, 1490, 1505, 1946
SchI	GAGTC	4 cut(s)	200, 572, 1569, 2007
ScrFI	CCNGG	6 cut(s)	356, 1131, 1188, 1316, 1484, 1557
SduI	GDGCHC	7 cut(s)	947, 1050, 1327, 1729, 1814, 1917, 2020
SfaNI	GCATC	1 cut(s)	1734
SfcI	CTRYAG	1 cut(s)	1755
Sfr274I	CTCGAG	1 cut(s)	1986
SgrAI	CRCCGGYG	1 cut(s)	2090
SinI	GGWCC	4 cut(s)	719, 782, 1490, 1946
SlaI	CTCGAG	1 cut(s)	1986
SmiI	ATTTAAAT	1 cut(s)	112
SmiMI	CAYNNNNRTG	3 cut(s)	1053, 1907, 2078
SmlI	CTYRAG	3 cut(s)	1509, 1652, 1986
SmoI	CTYRAG	3 cut(s)	1509, 1652, 1986
SsiI	CCGC	5 cut(s)	11, 380, 1368, 1371, 1787
SspI	AATATT	1 cut(s)	1424
SspMI	CTAG	1 cut(s)	338
StyD4I	CCNGG	6 cut(s)	354, 1129, 1186, 1314, 1482, 1555
StyI	CCWWGG	3 cut(s)	569, 856, 1525
SwaI	ATTTAAAT	1 cut(s)	112
TaaI	ACNGT	4 cut(s)	175, 417, 452, 547
TaiI	ACGT	2 cut(s)	615, 2027
TaqI	TCGA	3 cut(s)	669, 1987, 1993
TatI	WGTACW	1 cut(s)	708
TauI	GCSGC	3 cut(s)	14, 1371, 1374
TfiI	GAWTC	2 cut(s)	871, 1058
Tru1I	TTAA	5 cut(s)	99, 111, 497, 1884, 2245
Tru9I	TTAA	5 cut(s)	99, 111, 497, 1884, 2245
TscAI	CASTG	6 cut(s)	165, 180, 550, 1212, 1912, 2064
TseFI	GTSAC	6 cut(s)	156, 279, 820, 849, 1797, 2047
TseI	GCWGC	3 cut(s)	32, 35, 749
Tsp45I	GTSAC	6 cut(s)	156, 279, 820, 849, 1797, 2047
TspDTI	ATGAA	2 cut(s)	435, 1175
TspGWI	ACGGA	1 cut(s)	1065
TspRI	CASTG	6 cut(s)	165, 180, 550, 1212, 1912, 2064
Van91I	CCANNNNNTGG	1 cut(s)	1502
VneI	GTGCAC	1 cut(s)	1323
VpaK11BI	GGWCC	4 cut(s)	719, 782, 1490, 1946
XapI	RAATTY	3 cut(s)	107, 1647, 1684
XceI	RCATGY	1 cut(s)	1126
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1774, 1906
XhoI	CTCGAG	1 cut(s)	1986
XmiI	GTMKAC	2 cut(s)	360, 1096
XmnI	GAANNNNTTC	3 cut(s)	407, 1425, 2239
XspI	CTAG	1 cut(s)	338

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.