No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g45501 |
| malus_domestica | MD11G1004000.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0108941 RchiOBHm_Chr3g0481731 RchiOBHm_Chr5g0034121 RchiOBHm_Chr5g0080081 RchiOBHm_Chr5g0083321 |
| rosa_laevigata | RLG00000037028 |
| rosa_multiflora | Rmu_co8166610.1_g000001 Rmu_sc0001444.1_g000019 Rmu_sc0002245.1_g000052 Rmu_sc0004031.1_g000008 Rmu_sc0008014.1_g000008 |
| rosa_roxburghii | Rroxscaffold_175G00431920 Rroxscaffold_1G00001190 Rroxscaffold_1G00015050 Rroxscaffold_1G00053210 Rroxscaffold_3G00246580 |
| rosa_rugosa | Rorug05G0484200 |
| rosa_samantha | Rh5AG128000 Rh5AG521900 Rh5AG533500 Rh5BG561100 Rh5CG583700 |
| rosa_wichuraiana | Rw1G036530 Rw5G048410 Rw5G049930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 111 |
| AccI | GTMKAC | 1 cut(s) | 181 |
| AclWI | GGATC | 1 cut(s) | 164 |
| AgsI | TTSAA | 1 cut(s) | 53 |
| AlwI | GGATC | 1 cut(s) | 164 |
| ApeKI | GCWGC | 1 cut(s) | 162 |
| BanI | GGYRCC | 1 cut(s) | 111 |
| BbvI | GCAGC | 1 cut(s) | 174 |
| BccI | CCATC | 1 cut(s) | 123 |
| BclI | TGATCA | 1 cut(s) | 27 |
| BfmI | CTRYAG | 1 cut(s) | 42 |
| BisI | GCNGC | 1 cut(s) | 163 |
| BlsI | GCNGC | 1 cut(s) | 164 |
| BmiI | GGNNCC | 2 cut(s) | 113, 141 |
| BpuEI | CTTGAG | 1 cut(s) | 40 |
| BseXI | GCAGC | 1 cut(s) | 174 |
| BshNI | GGYRCC | 1 cut(s) | 111 |
| BsiSI | CCGG | 1 cut(s) | 170 |
| BsmI | GAATGC | 1 cut(s) | 165 |
| Bsp143I | GATC | 2 cut(s) | 27, 156 |
| BspLI | GGNNCC | 2 cut(s) | 113, 141 |
| BspPI | GGATC | 1 cut(s) | 164 |
| BspT107I | GGYRCC | 1 cut(s) | 111 |
| BssMI | GATC | 2 cut(s) | 27, 156 |
| Bst4CI | ACNGT | 4 cut(s) | 34, 75, 98, 144 |
| BstKTI | GATC | 2 cut(s) | 30, 159 |
| BstMBI | GATC | 2 cut(s) | 27, 156 |
| BstSFI | CTRYAG | 1 cut(s) | 42 |
| BstV1I | GCAGC | 1 cut(s) | 174 |
| CviJI | RGCY | 1 cut(s) | 92 |
| CviKI_1 | RGCY | 1 cut(s) | 92 |
| DpnI | GATC | 2 cut(s) | 29, 158 |
| DpnII | GATC | 2 cut(s) | 27, 156 |
| FaiI | YATR | 5 cut(s) | 9, 86, 104, 148, 150 |
| FauNDI | CATATG | 1 cut(s) | 148 |
| FbaI | TGATCA | 1 cut(s) | 27 |
| FblI | GTMKAC | 1 cut(s) | 181 |
| Fnu4HI | GCNGC | 1 cut(s) | 163 |
| Fsp4HI | GCNGC | 1 cut(s) | 163 |
| GluI | GCNGC | 1 cut(s) | 163 |
| HapII | CCGG | 1 cut(s) | 170 |
| HincII | GTYRAC | 1 cut(s) | 182 |
| HindII | GTYRAC | 1 cut(s) | 182 |
| HpaII | CCGG | 1 cut(s) | 170 |
| Hpy166II | GTNNAC | 1 cut(s) | 182 |
| Hpy188I | TCNGA | 2 cut(s) | 82, 120 |
| Hpy188III | TCNNGA | 1 cut(s) | 19 |
| Hpy8I | GTNNAC | 1 cut(s) | 182 |
| Hpy99I | CGWCG | 1 cut(s) | 102 |
| HpyAV | CCTTC | 2 cut(s) | 118, 146 |
| HpyCH4III | ACNGT | 4 cut(s) | 34, 75, 98, 144 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| Ksp22I | TGATCA | 1 cut(s) | 27 |
| Kzo9I | GATC | 2 cut(s) | 27, 156 |
| LpnPI | CCDG | 2 cut(s) | 49, 183 |
| Lsp1109I | GCAGC | 1 cut(s) | 174 |
| MaeIII | GTNAC | 1 cut(s) | 34 |
| MalI | GATC | 2 cut(s) | 29, 158 |
| MboI | GATC | 2 cut(s) | 27, 156 |
| MluCI | AATT | 1 cut(s) | 48 |
| MnlI | CCTC | 2 cut(s) | 82, 102 |
| MspI | CCGG | 1 cut(s) | 170 |
| Mva1269I | GAATGC | 1 cut(s) | 165 |
| NdeI | CATATG | 1 cut(s) | 148 |
| NdeII | GATC | 2 cut(s) | 27, 156 |
| NlaIV | GGNNCC | 2 cut(s) | 113, 141 |
| NmuCI | GTSAC | 1 cut(s) | 34 |
| PctI | GAATGC | 1 cut(s) | 165 |
| PkrI | GCNGC | 1 cut(s) | 164 |
| PspN4I | GGNNCC | 2 cut(s) | 113, 141 |
| SalI | GTCGAC | 1 cut(s) | 180 |
| SatI | GCNGC | 1 cut(s) | 163 |
| Sau3AI | GATC | 2 cut(s) | 27, 156 |
| SetI | ASST | 3 cut(s) | 113, 129, 179 |
| SfcI | CTRYAG | 1 cut(s) | 42 |
| SgeI | CNNG | 3 cut(s) | 31, 76, 182 |
| SmlI | CTYRAG | 1 cut(s) | 19 |
| SmoI | CTYRAG | 1 cut(s) | 19 |
| Sse9I | AATT | 1 cut(s) | 48 |
| TaaI | ACNGT | 4 cut(s) | 34, 75, 98, 144 |
| TaqI | TCGA | 2 cut(s) | 129, 181 |
| TasI | AATT | 1 cut(s) | 48 |
| TseFI | GTSAC | 1 cut(s) | 34 |
| TseI | GCWGC | 1 cut(s) | 162 |
| Tsp45I | GTSAC | 1 cut(s) | 34 |
| TspDTI | ATGAA | 2 cut(s) | 137, 165 |
| XmiI | GTMKAC | 1 cut(s) | 181 |