Rorug05G0484200

thiosulfate transmembrane transporter activity

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
66734397 .. 66735467
1071 bp
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UTR
Exon/CDS
Intron
Rorug05G0484200.1

Sequence Viewer

Length: 366 bp
ATGAACACTAGGAAGGCCAGAAATGAAGGTTCTGGGAATGGAAATGCTGAATCAAGATCATTCCTTGAAAAGAAGCTCGTATTTTGTTTTCGTTCACACATTGCAGCACAAATGCTACTCCCTTTCAGAGAGGAGTACTTGCTTTCTTCTTCAGAGTTAACGCAAGCACAGGAGATAGCTACACGAATGGTTATTCAGGATGGGTGGGGACCTGATGATTGTCCTGCAATATATTATCACAGCAATGCGTCTACTACTTTAAGCATGGGGAATAACCATGAGTATGATATGGCAGTTAAAGTTGAAAAGATCCATGATTTAGCATATTATAAAGCTAAAGAAATGCTCCATCGAAATGAGTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

121

Amino Acids

13.93

Weight (kDa)

6.19

Isoelectric Point (pI)

42.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 330
AccI GTMKAC 1 cut(s) 251
AclWI GGATC 1 cut(s) 304
AcuI CTGAAG 1 cut(s) 135
AfaI GTAC 1 cut(s) 137
AgsI TTSAA 2 cut(s) 68, 305
AluBI AGCT 3 cut(s) 76, 179, 335
AluI AGCT 3 cut(s) 76, 179, 335
AlwI GGATC 1 cut(s) 304
AoxI GGCC 1 cut(s) 15
ApeKI GCWGC 1 cut(s) 104
AspS9I GGNCC 1 cut(s) 209
AvaII GGWCC 1 cut(s) 209
BbvI GCAGC 1 cut(s) 116
BccI CCATC 2 cut(s) 194, 357
BfaI CTAG 1 cut(s) 9
BisI GCNGC 1 cut(s) 105
BlsI GCNGC 1 cut(s) 106
BmcAI AGTACT 1 cut(s) 137
Bme18I GGWCC 1 cut(s) 209
BmgT120I GGNCC 1 cut(s) 209
BmiI GGNNCC 1 cut(s) 210
Bse3DI GCAATG 2 cut(s) 99, 250
BseGI GGATG 1 cut(s) 205
BseMI GCAATG 2 cut(s) 99, 250
BseRI GAGGAG 1 cut(s) 146
BseXI GCAGC 1 cut(s) 116
BshFI GGCC 1 cut(s) 17
BslFI GGGAC 1 cut(s) 222
BsmFI GGGAC 1 cut(s) 222
BsnI GGCC 1 cut(s) 17
Bsp143I GATC 2 cut(s) 56, 309
BspANI GGCC 1 cut(s) 17
BspLI GGNNCC 1 cut(s) 210
BspPI GGATC 1 cut(s) 304
BsrDI GCAATG 2 cut(s) 99, 250
BssMI GATC 2 cut(s) 56, 309
BstC8I GCNNGC 1 cut(s) 165
BstF5I GGATG 1 cut(s) 205
BstKTI GATC 2 cut(s) 59, 312
BstMBI GATC 2 cut(s) 56, 309
BstV1I GCAGC 1 cut(s) 116
BstX2I RGATCY 1 cut(s) 309
BstYI RGATCY 1 cut(s) 309
BsuRI GGCC 1 cut(s) 17
BtsCI GGATG 1 cut(s) 205
Cac8I GCNNGC 1 cut(s) 165
Cfr13I GGNCC 1 cut(s) 209
CseI GACGC 1 cut(s) 237
Csp6I GTAC 1 cut(s) 136
CviAII CATG 3 cut(s) 265, 278, 314
CviJI RGCY 4 cut(s) 17, 76, 179, 335
CviKI_1 RGCY 4 cut(s) 17, 76, 179, 335
CviQI GTAC 1 cut(s) 136
DpnI GATC 2 cut(s) 58, 311
DpnII GATC 2 cut(s) 56, 309
Eco47I GGWCC 1 cut(s) 209
Eco57I CTGAAG 1 cut(s) 135
EcoO109I RGGNCCY 1 cut(s) 209
FaeI CATG 3 cut(s) 268, 281, 317
FaiI YATR 8 cut(s) 232, 266, 279, 285, 290, 315, 325, 330
FaqI GGGAC 1 cut(s) 222
FatI CATG 3 cut(s) 264, 277, 313
FblI GTMKAC 1 cut(s) 251
Fnu4HI GCNGC 1 cut(s) 105
FokI GGATG 1 cut(s) 212
Fsp4HI GCNGC 1 cut(s) 105
FspBI CTAG 1 cut(s) 9
GluI GCNGC 1 cut(s) 105
HaeIII GGCC 1 cut(s) 17
HgaI GACGC 1 cut(s) 237
Hin1II CATG 3 cut(s) 268, 281, 317
HincII GTYRAC 1 cut(s) 159
HindII GTYRAC 1 cut(s) 159
HinfI GANTC 1 cut(s) 50
HpaI GTTAAC 1 cut(s) 159
Hpy166II GTNNAC 3 cut(s) 95, 159, 252
Hpy188I TCNGA 2 cut(s) 128, 154
Hpy188III TCNNGA 2 cut(s) 54, 197
Hpy8I GTNNAC 3 cut(s) 95, 159, 252
HpyAV CCTTC 2 cut(s) 7, 20
HpyCH4V TGCA 2 cut(s) 104, 227
Hsp92II CATG 3 cut(s) 268, 281, 317
KspAI GTTAAC 1 cut(s) 159
Kzo9I GATC 2 cut(s) 56, 309
LmnI GCTCC 1 cut(s) 351
LpnPI CCDG 6 cut(s) 18, 31, 155, 182, 225, 237
Lsp1109I GCAGC 1 cut(s) 116
MaeI CTAG 1 cut(s) 9
MalI GATC 2 cut(s) 58, 311
MboI GATC 2 cut(s) 56, 309
MboII GAAGA 2 cut(s) 138, 141
MflI RGATCY 1 cut(s) 309
MnlI CCTC 1 cut(s) 124
MseI TTAA 3 cut(s) 158, 260, 297
MslI CAYNNNNRTG 3 cut(s) 243, 282, 354
NdeII GATC 2 cut(s) 56, 309
NlaIII CATG 3 cut(s) 268, 281, 317
NlaIV GGNNCC 1 cut(s) 210
PfeI GAWTC 1 cut(s) 50
PkrI GCNGC 1 cut(s) 106
PpuMI RGGWCCY 1 cut(s) 209
PsiI TTATAA 1 cut(s) 330
Psp5II RGGWCCY 1 cut(s) 209
PspN4I GGNNCC 1 cut(s) 210
PspPI GGNCC 1 cut(s) 209
PspPPI RGGWCCY 1 cut(s) 209
PsuI RGATCY 1 cut(s) 309
RsaI GTAC 1 cut(s) 137
RsaNI GTAC 1 cut(s) 136
RseI CAYNNNNRTG 3 cut(s) 243, 282, 354
SaqAI TTAA 3 cut(s) 158, 260, 297
SatI GCNGC 1 cut(s) 105
Sau3AI GATC 2 cut(s) 56, 309
Sau96I GGNCC 1 cut(s) 209
ScaI AGTACT 1 cut(s) 137
SetI ASST 5 cut(s) 31, 78, 181, 214, 337
SinI GGWCC 1 cut(s) 209
SmiMI CAYNNNNRTG 3 cut(s) 243, 282, 354
SspMI CTAG 1 cut(s) 9
TaqI TCGA 1 cut(s) 352
TatI WGTACW 1 cut(s) 135
TfiI GAWTC 1 cut(s) 50
Tru1I TTAA 3 cut(s) 158, 260, 297
Tru9I TTAA 3 cut(s) 158, 260, 297
TseI GCWGC 1 cut(s) 104
TspDTI ATGAA 2 cut(s) 17, 39
VpaK11BI GGWCC 1 cut(s) 209
XmiI GTMKAC 1 cut(s) 251
XspI CTAG 1 cut(s) 9
ZrmI AGTACT 1 cut(s) 137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.