Rh5BG561100

thiosulfate transmembrane transporter activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0006401
Physical Location & Seq
Forward (+)
88987327 .. 88994105
6779 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG561100.1

Sequence Viewer

Length: 843 bp
ATGAAGATCATGGAAGAGAAGAAAGACAGAGCAGAGTTTGAGGGCTTGAAACCTTTTTGGGGTCTTCCTCCTCCTCCTTCAGTGCTCAAGCCCTTTGTGCATGGCGGAGTCGCTGGGCTTCTCACAGGCGCTATGAATGGGGCAATAGAGTACTCAGGATTCCACATCCTAAAGAACGTTCCTCTCTTTCGAAACCATCCCACATATGTGCCGCGTTGGATCTTTGTCAAGATAATCCCTGGTCTGGTTTTGATTGATGCTTTGGCTTATAGTCAGCTACTTGGAATTTACGAGATTCCGAGACAAAGAGCAACTACAAATGAGGGTATGCAGCCAAGGCTTTATCAGGAAGCTGCTTGTGGGTTGATTGCAGGAGCAGCTGGAACATGTGTCAGCTTTCCATTGTATCTAGCGCTTTACCGGAAGCGGTTTGAATCTATGGGGGATGCTGCAGGGCGATGGAGACTAAGAAGCAATTTGTCACTGTTAGCATATGGAAGTGTTTCATGGAAGAGAAGAGTTGGGTTACGCATGGGTATGGTTGCTTCCTATAAGCCAAGTCTCCCTTATCTCGTGGAATCTCGAGGTTTTAGTGAAGAGGATGCAAAATCTGGTGCAGGGGCTATTTCAGCATTGTCTGCTGCTGCATGCGCTGTATTGGCACCATATGCTTGCTCCCTCGTTCTTGCACGTGAAACTCTAAGATCAAGAGGACCCCTTGGATTCTTAACAGGACTTTCTGGTCTCTGTTTTCACGAAGCGCCTAAGGTCATGGTATTCTGGGCTGTTTTTGAAGAACTCCAGAAATATTCCAAACCATCAATAGAATCCGAGCAATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04964 map04964
Pfam Domains
Protein Families
Mito_carr

Protein Analysis

280

Amino Acids

30.73

Weight (kDa)

9.41

Isoelectric Point (pI)

49.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 741
AccB1I GGYRCC 1 cut(s) 661
AccII CGCG 1 cut(s) 214
AciI CCGC 3 cut(s) 105, 212, 427
AclI AACGTT 1 cut(s) 177
AclWI GGATC 1 cut(s) 227
AcsI RAATTY 1 cut(s) 285
AcuI CTGAAG 1 cut(s) 63
AcvI CACGTG 1 cut(s) 692
AfaI GTAC 1 cut(s) 152
AfeI AGCGCT 1 cut(s) 414
AfiI CCNNNNNNNGG 2 cut(s) 59, 244
AflIII ACRYGT 1 cut(s) 386
AgsI TTSAA 3 cut(s) 49, 434, 794
AjnI CCWGG 1 cut(s) 238
AleI CACNNNNGTG 1 cut(s) 206
AluBI AGCT 4 cut(s) 277, 353, 380, 396
AluI AGCT 4 cut(s) 277, 353, 380, 396
Alw21I GWGCWC 1 cut(s) 87
Alw26I GTCTC 4 cut(s) 295, 457, 566, 749
AlwI GGATC 1 cut(s) 227
Ama87I CYCGRG 1 cut(s) 582
Aor51HI AGCGCT 1 cut(s) 414
ApeKI GCWGC 6 cut(s) 331, 353, 377, 449, 641, 644
ApoI RAATTY 1 cut(s) 285
Asp700I GAANNNNTTC 1 cut(s) 502
AspLEI GCGC 4 cut(s) 131, 415, 653, 763
AspS9I GGNCC 1 cut(s) 713
AsuII TTCGAA 1 cut(s) 190
AvaI CYCGRG 1 cut(s) 582
AvaII GGWCC 1 cut(s) 713
AxyI CCTNAGG 1 cut(s) 765
BanI GGYRCC 1 cut(s) 661
BarI GAAGNNNNNNTAC 2 cut(s) 529, 561
BauI CACGAG 1 cut(s) 572
BbrPI CACGTG 1 cut(s) 692
BbsI GAAGAC 1 cut(s) 56
Bbv12I GWGCWC 1 cut(s) 87
BbvI GCAGC 6 cut(s) 340, 343, 389, 436, 628, 631
BccI CCATC 3 cut(s) 204, 453, 826
BciT130I CCWGG 1 cut(s) 240
BcoDI GTCTC 4 cut(s) 295, 457, 566, 749
BfaI CTAG 1 cut(s) 410
BfmI CTRYAG 1 cut(s) 450
BfoI RGCGCY 3 cut(s) 132, 416, 764
BisI GCNGC 7 cut(s) 212, 332, 354, 378, 450, 642, 645
BlsI GCNGC 7 cut(s) 213, 333, 355, 379, 451, 643, 646
BmcAI AGTACT 1 cut(s) 152
Bme1390I CCNGG 1 cut(s) 240
Bme18I GGWCC 1 cut(s) 713
BmeT110I CYCGRG 1 cut(s) 582
BmgT120I GGNCC 1 cut(s) 713
BmiI GGNNCC 2 cut(s) 663, 715
BmrFI CCNGG 1 cut(s) 240
BmsI GCATC 3 cut(s) 247, 436, 592
BpiI GAAGAC 1 cut(s) 56
BpmI CTGGAG 1 cut(s) 785
Bpu14I TTCGAA 1 cut(s) 190
BpuEI CTTGAG 1 cut(s) 71
BsaAI YACGTR 1 cut(s) 692
BsaI GGTCTC 1 cut(s) 749
BsaJI CCNNGG 3 cut(s) 238, 335, 718
BsaWI WCCGGW 1 cut(s) 420
Bsc4I CCNNNNNNNGG 2 cut(s) 59, 244
Bse21I CCTNAGG 1 cut(s) 765
BseBI CCWGG 1 cut(s) 240
BseDI CCNNGG 3 cut(s) 238, 335, 718
BseGI GGATG 4 cut(s) 165, 196, 451, 607
BseLI CCNNNNNNNGG 2 cut(s) 59, 244
BseMII CTCAG 1 cut(s) 168
BseRI GAGGAG 2 cut(s) 60, 63
BseXI GCAGC 6 cut(s) 340, 343, 389, 436, 628, 631
BseYI CCCAGC 1 cut(s) 113
BsgI GTGCAG 1 cut(s) 636
Bsh1236I CGCG 1 cut(s) 214
BshNI GGYRCC 1 cut(s) 661
BsiHKAI GWGCWC 1 cut(s) 87
BsiHKCI CYCGRG 1 cut(s) 582
BsiSI CCGG 1 cut(s) 421
BslI CCNNNNNNNGG 2 cut(s) 59, 244
BsmAI GTCTC 4 cut(s) 295, 457, 566, 749
Bso31I GGTCTC 1 cut(s) 749
BsoBI CYCGRG 1 cut(s) 582
Bsp119I TTCGAA 1 cut(s) 190
Bsp1286I GDGCHC 1 cut(s) 87
Bsp143I GATC 3 cut(s) 6, 219, 704
BspACI CCGC 3 cut(s) 105, 212, 427
BspCNI CTCAG 1 cut(s) 167
BspFNI CGCG 1 cut(s) 214
BspLI GGNNCC 2 cut(s) 663, 715
BspMAI CTGCAG 1 cut(s) 454
BspPI GGATC 1 cut(s) 227
BspT104I TTCGAA 1 cut(s) 190
BspT107I GGYRCC 1 cut(s) 661
BspTNI GGTCTC 1 cut(s) 749
BssECI CCNNGG 3 cut(s) 238, 335, 718
BssMI GATC 3 cut(s) 6, 219, 704
BssSI CACGAG 1 cut(s) 572
BssT1I CCWWGG 2 cut(s) 335, 718
Bst2BI CACGAG 1 cut(s) 572
Bst2UI CCWGG 1 cut(s) 240
Bst4CI ACNGT 1 cut(s) 486
Bst6I CTCTTC 4 cut(s) 9, 506, 511, 591
BstAPI GCANNNNNTGC 2 cut(s) 638, 668
BstBAI YACGTR 1 cut(s) 692
BstBI TTCGAA 1 cut(s) 190
BstC8I GCNNGC 2 cut(s) 649, 673
BstDEI CTNAG 4 cut(s) 154, 467, 701, 765
BstF5I GGATG 4 cut(s) 165, 196, 451, 607
BstFNI CGCG 1 cut(s) 214
BstH2I RGCGCY 3 cut(s) 132, 416, 764
BstHHI GCGC 4 cut(s) 131, 415, 653, 763
BstKTI GATC 3 cut(s) 9, 222, 707
BstMAI GTCTC 4 cut(s) 295, 457, 566, 749
BstMBI GATC 3 cut(s) 6, 219, 704
BstMWI GCNNNNNNNGC 8 cut(s) 97, 337, 377, 629, 638, 650, 659, 668
BstNI CCWGG 1 cut(s) 240
BstNSI RCATGY 2 cut(s) 390, 651
BstSCI CCNGG 1 cut(s) 238
BstSFI CTRYAG 1 cut(s) 450
BstUI CGCG 1 cut(s) 214
BstV1I GCAGC 6 cut(s) 340, 343, 389, 436, 628, 631
BstV2I GAAGAC 1 cut(s) 56
BstX2I RGATCY 1 cut(s) 219
BstYI RGATCY 1 cut(s) 219
Bsu36I CCTNAGG 1 cut(s) 765
BtgZI GCGATG 1 cut(s) 472
BtsCI GGATG 4 cut(s) 165, 196, 451, 607
BtsIMutI CAGTG 2 cut(s) 87, 482
Cac8I GCNNGC 2 cut(s) 649, 673
CfoI GCGC 4 cut(s) 131, 415, 653, 763
Cfr13I GGNCC 1 cut(s) 713
Csp6I GTAC 1 cut(s) 151
CviAII CATG 7 cut(s) 10, 101, 387, 507, 532, 648, 772
CviQI GTAC 1 cut(s) 151
DdeI CTNAG 4 cut(s) 154, 467, 701, 765
DpnI GATC 3 cut(s) 8, 221, 706
DpnII GATC 3 cut(s) 6, 219, 704
DrdI GACNNNNNNGTC 1 cut(s) 741
DseDI GACNNNNNNGTC 1 cut(s) 741
Eam1104I CTCTTC 4 cut(s) 9, 506, 511, 591
EarI CTCTTC 4 cut(s) 9, 506, 511, 591
EciI GGCGGA 1 cut(s) 120
Eco130I CCWWGG 2 cut(s) 335, 718
Eco31I GGTCTC 1 cut(s) 749
Eco47I GGWCC 1 cut(s) 713
Eco47III AGCGCT 1 cut(s) 414
Eco57I CTGAAG 1 cut(s) 63
Eco72I CACGTG 1 cut(s) 692
Eco81I CCTNAGG 1 cut(s) 765
Eco88I CYCGRG 1 cut(s) 582
EcoO109I RGGNCCY 1 cut(s) 713
EcoRII CCWGG 1 cut(s) 238
EcoT14I CCWWGG 2 cut(s) 335, 718
ErhI CCWWGG 2 cut(s) 335, 718
FaeI CATG 7 cut(s) 13, 104, 390, 510, 535, 651, 775
FalI AAGNNNNNCTT 2 cut(s) 550, 582
FatI CATG 7 cut(s) 9, 100, 386, 506, 531, 647, 771
FauNDI CATATG 3 cut(s) 205, 493, 667
Fnu4HI GCNGC 7 cut(s) 212, 332, 354, 378, 450, 642, 645
FokI GGATG 4 cut(s) 152, 183, 458, 614
Fsp4HI GCNGC 7 cut(s) 212, 332, 354, 378, 450, 642, 645
FspBI CTAG 1 cut(s) 410
GlaI GCGC 4 cut(s) 130, 414, 652, 762
GluI GCNGC 7 cut(s) 212, 332, 354, 378, 450, 642, 645
GsaI CCCAGC 1 cut(s) 117
GsuI CTGGAG 1 cut(s) 785
HaeII RGCGCY 3 cut(s) 132, 416, 764
HapII CCGG 1 cut(s) 421
HhaI GCGC 4 cut(s) 131, 415, 653, 763
Hin1II CATG 7 cut(s) 13, 104, 390, 510, 535, 651, 775
Hin6I GCGC 4 cut(s) 129, 413, 651, 761
HinP1I GCGC 4 cut(s) 129, 413, 651, 761
HinfI GANTC 7 cut(s) 108, 159, 295, 434, 578, 723, 827
HpaII CCGG 1 cut(s) 421
Hpy188I TCNGA 2 cut(s) 300, 832
Hpy188III TCNNGA 7 cut(s) 156, 229, 347, 582, 708, 755, 802
HpyAV CCTTC 1 cut(s) 87
HpyCH4III ACNGT 1 cut(s) 486
HpyCH4IV ACGT 2 cut(s) 177, 691
HpyCH4V TGCA 8 cut(s) 100, 331, 371, 452, 605, 617, 647, 689
HpyF10VI GCNNNNNNNGC 8 cut(s) 97, 337, 377, 629, 638, 650, 659, 668
HpyF3I CTNAG 4 cut(s) 154, 467, 701, 765
HpySE526I ACGT 2 cut(s) 177, 691
Hsp92II CATG 7 cut(s) 13, 104, 390, 510, 535, 651, 775
HspAI GCGC 4 cut(s) 129, 413, 651, 761
Kzo9I GATC 3 cut(s) 6, 219, 704
LmnI GCTCC 2 cut(s) 374, 680
Lsp1109I GCAGC 6 cut(s) 340, 343, 389, 436, 628, 631
LweI GCATC 3 cut(s) 247, 436, 592
MaeI CTAG 1 cut(s) 410
MaeII ACGT 2 cut(s) 177, 691
MaeIII GTNAC 2 cut(s) 480, 525
MalI GATC 3 cut(s) 8, 221, 706
MboI GATC 3 cut(s) 6, 219, 704
MboII GAAGA 8 cut(s) 16, 26, 31, 56, 523, 528, 608, 806
MflI RGATCY 1 cut(s) 219
MhlI GDGCHC 1 cut(s) 87
MluCI AATT 2 cut(s) 285, 475
MlyI GAGTC 1 cut(s) 117
MmeI TCCRAC 1 cut(s) 197
MroXI GAANNNNTTC 1 cut(s) 502
MseI TTAA 2 cut(s) 728, 841
MslI CAYNNNNRTG 2 cut(s) 206, 536
MspA1I CMGCKG 1 cut(s) 380
MspI CCGG 1 cut(s) 421
MspR9I CCNGG 1 cut(s) 240
MvaI CCWGG 1 cut(s) 240
MvnI CGCG 1 cut(s) 214
MwoI GCNNNNNNNGC 8 cut(s) 97, 337, 377, 629, 638, 650, 659, 668
NdeI CATATG 3 cut(s) 205, 493, 667
NdeII GATC 3 cut(s) 6, 219, 704
NlaIII CATG 7 cut(s) 13, 104, 390, 510, 535, 651, 775
NlaIV GGNNCC 2 cut(s) 663, 715
NmuCI GTSAC 1 cut(s) 480
NspI RCATGY 2 cut(s) 390, 651
NspV TTCGAA 1 cut(s) 190
OliI CACNNNNGTG 1 cut(s) 206
PaeI GCATGC 1 cut(s) 651
PaeR7I CTCGAG 1 cut(s) 582
PciI ACATGT 1 cut(s) 386
PdmI GAANNNNTTC 1 cut(s) 502
PfeI GAWTC 6 cut(s) 159, 295, 434, 578, 723, 827
PkrI GCNGC 7 cut(s) 213, 333, 355, 379, 451, 643, 646
PleI GAGTC 1 cut(s) 116
PmaCI CACGTG 1 cut(s) 692
PmlI CACGTG 1 cut(s) 692
PpsI GAGTC 1 cut(s) 116
Ppu21I YACGTR 1 cut(s) 692
PpuMI RGGWCCY 1 cut(s) 713
PscI ACATGT 1 cut(s) 386
Psp1406I AACGTT 1 cut(s) 177
Psp5II RGGWCCY 1 cut(s) 713
Psp6I CCWGG 1 cut(s) 238
PspCI CACGTG 1 cut(s) 692
PspFI CCCAGC 1 cut(s) 113
PspGI CCWGG 1 cut(s) 238
PspN4I GGNNCC 2 cut(s) 663, 715
PspPI GGNCC 1 cut(s) 713
PspPPI RGGWCCY 1 cut(s) 713
PstI CTGCAG 1 cut(s) 454
PsuI RGATCY 1 cut(s) 219
PvuII CAGCTG 1 cut(s) 380
RsaI GTAC 1 cut(s) 152
RsaNI GTAC 1 cut(s) 151
RseI CAYNNNNRTG 2 cut(s) 206, 536
SaqAI TTAA 2 cut(s) 728, 841
SatI GCNGC 7 cut(s) 212, 332, 354, 378, 450, 642, 645
Sau3AI GATC 3 cut(s) 6, 219, 704
Sau96I GGNCC 1 cut(s) 713
ScaI AGTACT 1 cut(s) 152
SchI GAGTC 1 cut(s) 117
ScrFI CCNGG 1 cut(s) 240
SduI GDGCHC 1 cut(s) 87
SetI ASST 9 cut(s) 55, 180, 279, 355, 382, 398, 589, 694, 771
SfaNI GCATC 3 cut(s) 247, 436, 592
SfcI CTRYAG 1 cut(s) 450
Sfr274I CTCGAG 1 cut(s) 582
SfuI TTCGAA 1 cut(s) 190
SinI GGWCC 1 cut(s) 713
SlaI CTCGAG 1 cut(s) 582
SmiMI CAYNNNNRTG 2 cut(s) 206, 536
SmlI CTYRAG 2 cut(s) 86, 582
SmoI CTYRAG 2 cut(s) 86, 582
SphI GCATGC 1 cut(s) 651
Sse9I AATT 2 cut(s) 285, 475
SsiI CCGC 3 cut(s) 105, 212, 427
SspI AATATT 1 cut(s) 809
SspMI CTAG 1 cut(s) 410
StyD4I CCNGG 1 cut(s) 238
StyI CCWWGG 2 cut(s) 335, 718
TaaI ACNGT 1 cut(s) 486
TaiI ACGT 2 cut(s) 180, 694
TaqI TCGA 2 cut(s) 190, 583
TasI AATT 2 cut(s) 285, 475
TatI WGTACW 1 cut(s) 150
TauI GCSGC 1 cut(s) 214
TfiI GAWTC 6 cut(s) 159, 295, 434, 578, 723, 827
Tru1I TTAA 2 cut(s) 728, 841
Tru9I TTAA 2 cut(s) 728, 841
TscAI CASTG 2 cut(s) 87, 489
TseFI GTSAC 1 cut(s) 480
TseI GCWGC 6 cut(s) 331, 353, 377, 449, 641, 644
Tsp45I GTSAC 1 cut(s) 480
TspDTI ATGAA 3 cut(s) 17, 149, 495
TspRI CASTG 2 cut(s) 87, 489
VpaK11BI GGWCC 1 cut(s) 713
XapI RAATTY 1 cut(s) 285
XceI RCATGY 2 cut(s) 390, 651
XhoI CTCGAG 1 cut(s) 582
XmnI GAANNNNTTC 1 cut(s) 502
XspI CTAG 1 cut(s) 410
ZrmI AGTACT 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.