RchiOBHm_Chr4g0398231

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
14736624 .. 14737410
787 bp
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UTR
Exon/CDS
Intron
PRQ37041

Sequence Viewer

Length: 171 bp
ATGAGGATGAAAGTGATGAGCTCATCTCTTTCTTTTCTTTTTTTTTTTGACATTCCTGCTTGCAGATTGTTGCATGTTTCAATCAAAGCTTTGTGGCGCTGCTGGAACTTGAGAGCAGCGCTTGCTACTGGAACATGGGAGAGCCAGGGGGCTGCTACTGGGATTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

56

Amino Acids

6.3

Weight (kDa)

10.09

Isoelectric Point (pI)

47.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfeI AGCGCT 1 cut(s) 120
AgsI TTSAA 1 cut(s) 81
AjnI CCWGG 1 cut(s) 144
AluBI AGCT 2 cut(s) 21, 89
AluI AGCT 2 cut(s) 21, 89
Alw21I GWGCWC 1 cut(s) 23
Aor51HI AGCGCT 1 cut(s) 120
ApeKI GCWGC 3 cut(s) 99, 116, 152
AspLEI GCGC 2 cut(s) 99, 121
BanII GRGCYC 1 cut(s) 23
Bbv12I GWGCWC 1 cut(s) 23
BbvI GCAGC 3 cut(s) 86, 128, 139
BciT130I CCWGG 1 cut(s) 146
BfoI RGCGCY 2 cut(s) 100, 122
BisI GCNGC 3 cut(s) 100, 117, 153
BlsI GCNGC 3 cut(s) 101, 118, 154
Bme1390I CCNGG 1 cut(s) 146
BmrFI CCNGG 1 cut(s) 146
BmrI ACTGGG 1 cut(s) 168
BmuI ACTGGG 1 cut(s) 168
BplI GAGNNNNNCTC 2 cut(s) 10, 42
BpuEI CTTGAG 1 cut(s) 130
BsaJI CCNNGG 1 cut(s) 145
Bse1I ACTGG 2 cut(s) 133, 163
BseBI CCWGG 1 cut(s) 146
BseDI CCNNGG 1 cut(s) 145
BseGI GGATG 1 cut(s) 12
BseNI ACTGG 2 cut(s) 133, 163
BseXI GCAGC 3 cut(s) 86, 128, 139
BsiHKAI GWGCWC 1 cut(s) 23
Bsp1286I GDGCHC 1 cut(s) 23
BsrI ACTGG 2 cut(s) 133, 163
BssECI CCNNGG 1 cut(s) 145
Bst2UI CCWGG 1 cut(s) 146
BstAPI GCANNNNNTGC 1 cut(s) 122
BstC8I GCNNGC 2 cut(s) 61, 123
BstF5I GGATG 1 cut(s) 12
BstH2I RGCGCY 2 cut(s) 100, 122
BstHHI GCGC 2 cut(s) 99, 121
BstMWI GCNNNNNNNGC 1 cut(s) 122
BstNI CCWGG 1 cut(s) 146
BstNSI RCATGY 1 cut(s) 77
BstSCI CCNGG 1 cut(s) 144
BstV1I GCAGC 3 cut(s) 86, 128, 139
BtsCI GGATG 1 cut(s) 12
Cac8I GCNNGC 2 cut(s) 61, 123
CfoI GCGC 2 cut(s) 99, 121
CviAII CATG 2 cut(s) 74, 135
CviJI RGCY 4 cut(s) 21, 89, 144, 152
CviKI_1 RGCY 4 cut(s) 21, 89, 144, 152
Ecl136II GAGCTC 1 cut(s) 21
Eco24I GRGCYC 1 cut(s) 23
Eco47III AGCGCT 1 cut(s) 120
Eco53kI GAGCTC 1 cut(s) 21
EcoICRI GAGCTC 1 cut(s) 21
EcoRII CCWGG 1 cut(s) 144
EcoT38I GRGCYC 1 cut(s) 23
FaeI CATG 2 cut(s) 77, 138
FaiI YATR 3 cut(s) 75, 136, 169
FatI CATG 2 cut(s) 73, 134
Fnu4HI GCNGC 3 cut(s) 100, 117, 153
FokI GGATG 1 cut(s) 19
FriOI GRGCYC 1 cut(s) 23
Fsp4HI GCNGC 3 cut(s) 100, 117, 153
GlaI GCGC 2 cut(s) 98, 120
GluI GCNGC 3 cut(s) 100, 117, 153
HaeII RGCGCY 2 cut(s) 100, 122
HhaI GCGC 2 cut(s) 99, 121
Hin1II CATG 2 cut(s) 77, 138
Hin6I GCGC 2 cut(s) 97, 119
HinP1I GCGC 2 cut(s) 97, 119
HindIII AAGCTT 1 cut(s) 87
HpyCH4V TGCA 2 cut(s) 63, 73
HpyF10VI GCNNNNNNNGC 1 cut(s) 122
Hsp92II CATG 2 cut(s) 77, 138
HspAI GCGC 2 cut(s) 97, 119
LpnPI CCDG 6 cut(s) 69, 88, 114, 131, 144, 158
Lsp1109I GCAGC 3 cut(s) 86, 128, 139
MhlI GDGCHC 1 cut(s) 23
MspR9I CCNGG 1 cut(s) 146
MvaI CCWGG 1 cut(s) 146
MwoI GCNNNNNNNGC 1 cut(s) 122
NlaIII CATG 2 cut(s) 77, 138
NspI RCATGY 1 cut(s) 77
PkrI GCNGC 3 cut(s) 101, 118, 154
Psp124BI GAGCTC 1 cut(s) 23
Psp6I CCWGG 1 cut(s) 144
PspGI CCWGG 1 cut(s) 144
SacI GAGCTC 1 cut(s) 23
SatI GCNGC 3 cut(s) 100, 117, 153
ScrFI CCNGG 1 cut(s) 146
SduI GDGCHC 1 cut(s) 23
SetI ASST 2 cut(s) 23, 91
SmlI CTYRAG 1 cut(s) 109
SmoI CTYRAG 1 cut(s) 109
SstI GAGCTC 1 cut(s) 23
StyD4I CCNGG 1 cut(s) 144
TseI GCWGC 3 cut(s) 99, 116, 152
TspDTI ATGAA 1 cut(s) 23
XceI RCATGY 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.