Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28050 |
| malus_domestica | MD03G1124300.v1.1 MD04G1147300.v1.1 |
| prunus_persica | Prupe.6G107000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0398231 RchiOBHm_Chr5g0057911 RchiOBHm_Chr5g0057961 RchiOBHm_Chr5g0058011 RchiOBHm_Chr5g0058021 RchiOBHm_Chr5g0058061 RchiOBHm_Chr5g0058071 |
| rosa_laevigata | RLG00000019928 RLG00000035191 RLG00000035192 |
| rosa_multiflora | Rmu_sc0000367.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00022520 Rroxscaffold_1G00022530 |
| rosa_rugosa | Rorug05G0310700 |
| rosa_samantha | Rh4DG434800 Rh5AG379300 Rh5AG379400 Rh5BG390500 Rh5CG414300 Rh5CG414400 Rh5DG405100 |
| rosa_wichuraiana | Rw5G035710 Rw5G035720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 297 |
| AcsI | RAATTY | 2 cut(s) | 362, 378 |
| AfaI | GTAC | 1 cut(s) | 390 |
| AgsI | TTSAA | 1 cut(s) | 241 |
| AluBI | AGCT | 2 cut(s) | 174, 350 |
| AluI | AGCT | 2 cut(s) | 174, 350 |
| AlwI | GGATC | 1 cut(s) | 297 |
| AoxI | GGCC | 1 cut(s) | 333 |
| ApeKI | GCWGC | 2 cut(s) | 103, 174 |
| ApoI | RAATTY | 2 cut(s) | 362, 378 |
| AsuHPI | GGTGA | 1 cut(s) | 32 |
| BbvI | GCAGC | 2 cut(s) | 115, 161 |
| BccI | CCATC | 1 cut(s) | 264 |
| BclI | TGATCA | 1 cut(s) | 37 |
| BfmI | CTRYAG | 1 cut(s) | 132 |
| BisI | GCNGC | 2 cut(s) | 104, 175 |
| BlpI | GCTNAGC | 1 cut(s) | 170 |
| BlsI | GCNGC | 2 cut(s) | 105, 176 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 170 |
| BpuEI | CTTGAG | 1 cut(s) | 369 |
| BseMII | CTCAG | 2 cut(s) | 161, 411 |
| BseRI | GAGGAG | 1 cut(s) | 232 |
| BseXI | GCAGC | 2 cut(s) | 115, 161 |
| BshFI | GGCC | 1 cut(s) | 335 |
| BsnI | GGCC | 1 cut(s) | 335 |
| Bsp143I | GATC | 3 cut(s) | 37, 221, 289 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 170 |
| BspANI | GGCC | 1 cut(s) | 335 |
| BspCNI | CTCAG | 2 cut(s) | 162, 410 |
| BspHI | TCATGA | 1 cut(s) | 94 |
| BspPI | GGATC | 1 cut(s) | 297 |
| BssMI | GATC | 3 cut(s) | 37, 221, 289 |
| BstDEI | CTNAG | 3 cut(s) | 170, 264, 397 |
| BstKTI | GATC | 3 cut(s) | 40, 224, 292 |
| BstMBI | GATC | 3 cut(s) | 37, 221, 289 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 332 |
| BstSFI | CTRYAG | 1 cut(s) | 132 |
| BstV1I | GCAGC | 2 cut(s) | 115, 161 |
| BstX2I | RGATCY | 1 cut(s) | 289 |
| BstYI | RGATCY | 1 cut(s) | 289 |
| BsuRI | GGCC | 1 cut(s) | 335 |
| CciI | TCATGA | 1 cut(s) | 94 |
| CseI | GACGC | 1 cut(s) | 263 |
| Csp6I | GTAC | 1 cut(s) | 389 |
| CviAII | CATG | 1 cut(s) | 95 |
| CviJI | RGCY | 4 cut(s) | 69, 174, 335, 350 |
| CviKI_1 | RGCY | 4 cut(s) | 69, 174, 335, 350 |
| CviQI | GTAC | 1 cut(s) | 389 |
| DdeI | CTNAG | 3 cut(s) | 170, 264, 397 |
| DpnI | GATC | 3 cut(s) | 39, 223, 291 |
| DpnII | GATC | 3 cut(s) | 37, 221, 289 |
| Eco32I | GATATC | 2 cut(s) | 120, 229 |
| EcoRV | GATATC | 2 cut(s) | 120, 229 |
| FaeI | CATG | 1 cut(s) | 98 |
| FaiI | YATR | 3 cut(s) | 96, 112, 296 |
| FatI | CATG | 1 cut(s) | 94 |
| FbaI | TGATCA | 1 cut(s) | 37 |
| Fnu4HI | GCNGC | 2 cut(s) | 104, 175 |
| Fsp4HI | GCNGC | 2 cut(s) | 104, 175 |
| GluI | GCNGC | 2 cut(s) | 104, 175 |
| HaeIII | GGCC | 1 cut(s) | 335 |
| HgaI | GACGC | 1 cut(s) | 263 |
| Hin1II | CATG | 1 cut(s) | 98 |
| HinfI | GANTC | 1 cut(s) | 208 |
| HphI | GGTGA | 1 cut(s) | 32 |
| Hpy166II | GTNNAC | 2 cut(s) | 253, 391 |
| Hpy188I | TCNGA | 4 cut(s) | 37, 54, 226, 374 |
| Hpy188III | TCNNGA | 1 cut(s) | 95 |
| Hpy8I | GTNNAC | 2 cut(s) | 253, 391 |
| HpyAV | CCTTC | 4 cut(s) | 42, 191, 247, 311 |
| HpyCH4V | TGCA | 1 cut(s) | 103 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 332 |
| HpyF3I | CTNAG | 3 cut(s) | 170, 264, 397 |
| Hsp92II | CATG | 1 cut(s) | 98 |
| Ksp22I | TGATCA | 1 cut(s) | 37 |
| Kzo9I | GATC | 3 cut(s) | 37, 221, 289 |
| LpnPI | CCDG | 2 cut(s) | 58, 138 |
| Lsp1109I | GCAGC | 2 cut(s) | 115, 161 |
| MalI | GATC | 3 cut(s) | 39, 223, 291 |
| MboI | GATC | 3 cut(s) | 37, 221, 289 |
| MfeI | CAATTG | 1 cut(s) | 72 |
| MflI | RGATCY | 1 cut(s) | 289 |
| MluCI | AATT | 5 cut(s) | 18, 72, 107, 362, 378 |
| MlyI | GAGTC | 1 cut(s) | 217 |
| MmeI | TCCRAC | 2 cut(s) | 160, 267 |
| MnlI | CCTC | 3 cut(s) | 108, 210, 325 |
| MseI | TTAA | 3 cut(s) | 17, 24, 356 |
| MunI | CAATTG | 1 cut(s) | 72 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 332 |
| NdeII | GATC | 3 cut(s) | 37, 221, 289 |
| NlaIII | CATG | 1 cut(s) | 98 |
| PagI | TCATGA | 1 cut(s) | 94 |
| PkrI | GCNGC | 2 cut(s) | 105, 176 |
| PleI | GAGTC | 1 cut(s) | 216 |
| PpsI | GAGTC | 1 cut(s) | 216 |
| PsuI | RGATCY | 1 cut(s) | 289 |
| RsaI | GTAC | 1 cut(s) | 390 |
| RsaNI | GTAC | 1 cut(s) | 389 |
| SaqAI | TTAA | 3 cut(s) | 17, 24, 356 |
| SatI | GCNGC | 2 cut(s) | 104, 175 |
| Sau3AI | GATC | 3 cut(s) | 37, 221, 289 |
| SchI | GAGTC | 1 cut(s) | 217 |
| SetI | ASST | 3 cut(s) | 176, 239, 352 |
| SfcI | CTRYAG | 1 cut(s) | 132 |
| SmlI | CTYRAG | 1 cut(s) | 384 |
| SmoI | CTYRAG | 1 cut(s) | 384 |
| Sse9I | AATT | 5 cut(s) | 18, 72, 107, 362, 378 |
| TasI | AATT | 5 cut(s) | 18, 72, 107, 362, 378 |
| TatI | WGTACW | 1 cut(s) | 388 |
| Tru1I | TTAA | 3 cut(s) | 17, 24, 356 |
| Tru9I | TTAA | 3 cut(s) | 17, 24, 356 |
| TseI | GCWGC | 2 cut(s) | 103, 174 |
| TspDTI | ATGAA | 2 cut(s) | 83, 111 |
| XapI | RAATTY | 2 cut(s) | 362, 378 |