Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003222

Physical Location & Seq

Genomic Coordinates Reverse (-)

8036612 .. 8039953

Gene Structure 3342 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29267

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGGAACAAGATACCCAACTCCCAATCCCAAGCAACCACCAAAACGTCGACGTTTTCTTCGACGCCCTCGACGATTTCCCTCCCTCCTCCGCCGACGACGACGACCAACCCGATCAATCCACGTCATCCTCCACCCTCGATGTCCCCGATTCCAAACCCTCTCCGACCTCCCACCTCCGTCTCCGGGCCTCCCGCCGAGAACTCTCCGGCGACGACTCCAAGACCTCCACTTTACAATCCTCCCAAACCGACCCAATCAACGACGCCAGGCTCAATTACCGATGCAGAAAGTTCAGACTTCGCCGGAATTTGAAGCCGCCGGAGTCGATTCAGGACCCGGTCGAACCGGTGCCAGCTCCGAGCGACCAGAAAGACGAGGGCTCGACTGTAACTACCGCCGCCGACGATGACCGAGGCGGTGACTCGGCCGACTCGGCCATGCAACTCGGTGACACTTCTTTTAACCCTCTTGTGTTCGTAGCTGGATTGATAATCAAAGCAATTGGGCTCCAAATTAATCTGATAATTAGCATTGTAACGTTCCCAGCTTGGATTTTGTATAATTCTTACATGCTTTTGGTTGACCCTTTACAAATTGTGGGTAGAGGGAGAGAGTTTTTGAGGGCAAAGTTGGTAAATTTATCGGCATTGGCTGCCGGAGCGGTTAGTCCTTTGGTTGGTGAGTGGGTGAAGGACAAGGACTCGGTTTGGAAGGTGGCATTGCGATTCGGGTGGGGTTTGGTTTGGGCGTTTTATGTAGGTTTTTTGTTGTGTGGTCTTTTGGTGTCGTCGCTTGTGTTTAGTGGGGTTTTTATGAGGTACATTGTGGTTGAGCCGCTGCAGATGAAGGAAATGTTGAACTTTGATTACACAAAGCATAGTCCAGTGGCCTATGTGCCGGTGGTGTTGTGTGCAGGGGTCGGTTGTGGTGTGGATTGTAAAGAGAAGGTTCGGGATGGGGGGATTTTCGGGTATAGGGTTATACCTCCTGGTCACAAATTGGCGGCTAGTGTTAAGTTTGTGTTGCCTGAATCGGAGTACAACAGGAATCTTGGGATCTTTCAGGTCAGGGTACAGTTCCTGTCTGCTGAAGGCAAAACCCTTGCCAGTTTGAGCCATCCATGCATGTTATATTTTAAAAGTGAGCCAATCCGCCTTCTATTGACATTCATAAAGATGGCTCCACTTATATCTGGCTACATTTCAGAGTCCCAAACTCTGAATCTGAAGTTCCGAGGGTTTGTGGAAGGTGATAGTCCTACTGCCTGCTTGAAAGTGACAATCGAACAACGTGCAGAATACAATCCTGGCGCTGGTATTCCCGAAATATACGATGCATCCATGACCCTTGAATCGGAACTTCCCCTGTTTAAAAGGATTATATGGAACTGGAGGAGAACTTTATTTGTTTGGATGAGTATGATGATGTTTATGATGGAGATGCTCTTTACTCTTGTCTGTTGTAGACCTCTAGTTATTCCGAGAGCAAGGCCAAGGGCTGCTTCTGCCAGCACCAGTCCCACTCAAACTCAAAGCAGCCCGCCAGTACGAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006996 GO:0007275 GO:0008150 GO:0009791 GO:0009846 GO:0009856 GO:0009987 GO:0010154 GO:0010162 GO:0010431 GO:0010876 GO:0012505 GO:0016043 GO:0019915 GO:0021700 GO:0022414 GO:0022607 GO:0022611 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0034389 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0051179 GO:0051235 GO:0051704 GO:0061458 GO:0065007 GO:0065008 GO:0070925 GO:0071695 GO:0071840 GO:0080154 GO:0080155 GO:0140042 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Seipin

Protein Analysis

518

Amino Acids

57.57

Weight (kDa)

6.28

Isoelectric Point (pI)

45.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Seipin	PF06775	259 - 477	8e-51	Putative adipose-regulatory protein (Seipin)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29760 AT2G34380
fragaria_vesca	FvH4_3g07070 FvH4_3g17950 FvH4_3g17960 FvH4_6g08010
malus_domestica	MD00G1007100.v1.1 MD03G1246800.v1.1 MD11G1267400.v1.1
prunus_persica	Prupe.4G068800_v2.0.a1 Prupe.4G068800_v2.0.a1 Prupe.4G158100_v2.0.a1 Prupe.4G158200_v2.0.a1
pyrus_communis	pycom03g19590 pycom05g27230 pycom10g22850
rosa_chinensis	RchiOBHm_Chr5g0012061
rosa_laevigata	RLG00000031882 RLG00000033207 RLG00000033208 RLG00000034416
rosa_multiflora	Rmu_sc0002519.1_g000007 Rmu_sc0003368.1_g000013 Rmu_sc0018966.1_g000004
rosa_roxburghii	Rroxscaffold_1G00050020 Rroxscaffold_1G00064530
rosa_rugosa	Rorug04G0460500 Rorug05G0116300
rosa_samantha	Rh5AG092700 Rh5AG209300 Rh5BG088700 Rh5BG208200 Rh5CG102400 Rh5CG232000 Rh5DG089100
rosa_wichuraiana	Rw5G008100 Rw5G019060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	349
AccBSI	CCGCTC	1 cut(s)	662
AccI	GTMKAC	2 cut(s)	48, 1465
AclI	AACGTT	1 cut(s)	539
AclWI	GGATC	1 cut(s)	1064
AcoI	YGGCCR	2 cut(s)	426, 435
AcsI	RAATTY	2 cut(s)	307, 637
AcuI	CTGAAG	2 cut(s)	1110, 1247
AcyI	GRCGYC	2 cut(s)	63, 264
AfaI	GTAC	4 cut(s)	821, 1040, 1074, 1548
AfiI	CCNNNNNNNGG	4 cut(s)	184, 677, 1313, 1354
AgeI	ACCGGT	1 cut(s)	346
AgsI	TTSAA	4 cut(s)	313, 859, 1273, 1352
AjiI	CACGTC	1 cut(s)	123
AjnI	CCWGG	3 cut(s)	266, 988, 1306
AjuI	GAANNNNNNNTTGG	2 cut(s)	1486, 1518
AluBI	AGCT	3 cut(s)	356, 482, 548
AluI	AGCT	3 cut(s)	356, 482, 548
Alw26I	GTCTC	1 cut(s)	185
AlwI	GGATC	1 cut(s)	1064
AlwNI	CAGNNNCTG	1 cut(s)	1081
AoxI	GGCC	5 cut(s)	186, 426, 435, 888, 1490
ApeKI	GCWGC	4 cut(s)	653, 838, 1499, 1536
ApoI	RAATTY	2 cut(s)	307, 637
ArsI	GACNNNNNNTTYG	2 cut(s)	41, 73
AseI	ATTAAT	1 cut(s)	516
AsiGI	ACCGGT	1 cut(s)	346
AspLEI	GCGC	1 cut(s)	1313
AspS9I	GGNCC	2 cut(s)	186, 334
AsuC2I	CCSGG	2 cut(s)	185, 338
AsuHPI	GGTGA	5 cut(s)	431, 461, 692, 700, 1262
AvaII	GGWCC	1 cut(s)	334
BanI	GGYRCC	1 cut(s)	349
BanII	GRGCYC	2 cut(s)	383, 510
BbvI	GCAGC	4 cut(s)	640, 825, 1486, 1548
BccI	CCATC	4 cut(s)	950, 1125, 1171, 1429
BcgI	CGANNNNNNTGC	2 cut(s)	1274, 1308
BciT130I	CCWGG	3 cut(s)	268, 990, 1308
BcnI	CCSGG	2 cut(s)	185, 338
BcoDI	GTCTC	1 cut(s)	185
BfaI	CTAG	3 cut(s)	1008, 1472, 1555
BfmI	CTRYAG	1 cut(s)	839
BfoI	RGCGCY	1 cut(s)	1314
BglI	GCCNNNNNGGC	1 cut(s)	434
BisI	GCNGC	8 cut(s)	317, 399, 654, 836, 839, 1005, 1500, 1537
BlsI	GCNGC	8 cut(s)	318, 400, 655, 837, 840, 1006, 1501, 1538
Bme1390I	CCNGG	5 cut(s)	185, 268, 338, 990, 1308
Bme18I	GGWCC	1 cut(s)	334
BmgBI	CACGTC	1 cut(s)	123
BmgT120I	GGNCC	2 cut(s)	186, 334
BmiI	GGNNCC	4 cut(s)	336, 351, 509, 1182
BmrFI	CCNGG	5 cut(s)	185, 268, 338, 990, 1308
BmsI	GCATC	4 cut(s)	272, 1324, 1346, 1431
BpmI	CTGGAG	1 cut(s)	1411
BpuMI	CCSGG	2 cut(s)	185, 338
BsaHI	GRCGYC	2 cut(s)	63, 264
BsaJI	CCNNGG	3 cut(s)	412, 1234, 1493
BsaWI	WCCGGW	1 cut(s)	346
Bsc4I	CCNNNNNNNGG	4 cut(s)	184, 677, 1313, 1354
Bse118I	RCCGGY	2 cut(s)	346, 898
Bse1I	ACTGG	5 cut(s)	884, 1107, 1394, 1515, 1544
Bse3DI	GCAATG	1 cut(s)	719
BseBI	CCWGG	3 cut(s)	268, 990, 1308
BseDI	CCNNGG	3 cut(s)	412, 1234, 1493
BseGI	GGATG	5 cut(s)	125, 961, 1117, 1337, 1419
BseLI	CCNNNNNNNGG	4 cut(s)	184, 677, 1313, 1354
BseMI	GCAATG	1 cut(s)	719
BseNI	ACTGG	5 cut(s)	884, 1107, 1394, 1515, 1544
BseRI	GAGGAG	2 cut(s)	76, 1408
BseX3I	CGGCCG	1 cut(s)	426
BseXI	GCAGC	4 cut(s)	640, 825, 1486, 1548
BseYI	CCCAGC	1 cut(s)	544
BsgI	GTGCAG	2 cut(s)	933, 1314
Bsh1285I	CGRYCG	2 cut(s)	342, 429
BshFI	GGCC	5 cut(s)	188, 428, 437, 890, 1492
BshNI	GGYRCC	1 cut(s)	349
BshTI	ACCGGT	1 cut(s)	346
BsiEI	CGRYCG	2 cut(s)	342, 429
BsiSI	CCGG	8 cut(s)	184, 207, 304, 320, 338, 347, 657, 899
BslFI	GGGAC	3 cut(s)	128, 1195, 1503
BslI	CCNNNNNNNGG	4 cut(s)	184, 677, 1313, 1354
BsmAI	GTCTC	1 cut(s)	185
BsmBI	CGTCTC	1 cut(s)	185
BsmFI	GGGAC	3 cut(s)	128, 1195, 1503
BsnI	GGCC	5 cut(s)	188, 428, 437, 890, 1492
Bsp1286I	GDGCHC	2 cut(s)	383, 510
Bsp143I	GATC	2 cut(s)	112, 1056
BspANI	GGCC	5 cut(s)	188, 428, 437, 890, 1492
BspLI	GGNNCC	4 cut(s)	336, 351, 509, 1182
BspMAI	CTGCAG	1 cut(s)	843
BspPI	GGATC	1 cut(s)	1064
BspT107I	GGYRCC	1 cut(s)	349
BsrBI	CCGCTC	1 cut(s)	662
BsrDI	GCAATG	1 cut(s)	719
BsrFI	RCCGGY	2 cut(s)	346, 898
BsrI	ACTGG	5 cut(s)	884, 1107, 1394, 1515, 1544
BssAI	RCCGGY	2 cut(s)	346, 898
BssECI	CCNNGG	3 cut(s)	412, 1234, 1493
BssMI	GATC	2 cut(s)	112, 1056
BssNI	GRCGYC	2 cut(s)	63, 264
BssT1I	CCWWGG	1 cut(s)	1493
Bst2UI	CCWGG	3 cut(s)	268, 990, 1308
Bst4CI	ACNGT	2 cut(s)	388, 1077
BstACI	GRCGYC	2 cut(s)	63, 264
BstAPI	GCANNNNNTGC	1 cut(s)	653
BstC8I	GCNNGC	4 cut(s)	354, 1267, 1510, 1541
BstF5I	GGATG	5 cut(s)	125, 961, 1117, 1337, 1419
BstH2I	RGCGCY	1 cut(s)	1314
BstHHI	GCGC	1 cut(s)	1313
BstKTI	GATC	2 cut(s)	115, 1059
BstMAI	GTCTC	1 cut(s)	185
BstMBI	GATC	2 cut(s)	112, 1056
BstMCI	CGRYCG	2 cut(s)	342, 429
BstMWI	GCNNNNNNNGC	5 cut(s)	434, 653, 659, 1122, 1505
BstNI	CCWGG	3 cut(s)	268, 990, 1308
BstNSI	RCATGY	2 cut(s)	574, 1129
BstSCI	CCNGG	5 cut(s)	183, 266, 336, 988, 1306
BstSFI	CTRYAG	1 cut(s)	839
BstV1I	GCAGC	4 cut(s)	640, 825, 1486, 1548
BstX2I	RGATCY	1 cut(s)	1056
BstYI	RGATCY	1 cut(s)	1056
BstZI	CGGCCG	1 cut(s)	426
BsuRI	GGCC	5 cut(s)	188, 428, 437, 890, 1492
BtrI	CACGTC	1 cut(s)	123
BtsCI	GGATG	5 cut(s)	125, 961, 1117, 1337, 1419
BtsIMutI	CAGTG	1 cut(s)	891
Cac8I	GCNNGC	4 cut(s)	354, 1267, 1510, 1541
CaiI	CAGNNNCTG	1 cut(s)	1081
CfoI	GCGC	1 cut(s)	1313
Cfr10I	RCCGGY	2 cut(s)	346, 898
Cfr13I	GGNCC	2 cut(s)	186, 334
CseI	GACGC	2 cut(s)	71, 272
Csp6I	GTAC	4 cut(s)	820, 1039, 1073, 1547
CspAI	ACCGGT	1 cut(s)	346
CviAII	CATG	5 cut(s)	439, 571, 1122, 1126, 1342
CviQI	GTAC	4 cut(s)	820, 1039, 1073, 1547
DpnI	GATC	2 cut(s)	114, 1058
DpnII	GATC	2 cut(s)	112, 1056
DraI	TTTAAA	2 cut(s)	1138, 1372
EaeI	YGGCCR	2 cut(s)	426, 435
EagI	CGGCCG	1 cut(s)	426
EciI	GGCGGA	2 cut(s)	79, 1142
EclXI	CGGCCG	1 cut(s)	426
Eco130I	CCWWGG	1 cut(s)	1493
Eco24I	GRGCYC	2 cut(s)	383, 510
Eco47I	GGWCC	1 cut(s)	334
Eco52I	CGGCCG	1 cut(s)	426
Eco57I	CTGAAG	2 cut(s)	1110, 1247
EcoO109I	RGGNCCY	1 cut(s)	334
EcoRII	CCWGG	3 cut(s)	266, 988, 1306
EcoT14I	CCWWGG	1 cut(s)	1493
EcoT22I	ATGCAT	2 cut(s)	1127, 1339
EcoT38I	GRGCYC	2 cut(s)	383, 510
ErhI	CCWWGG	1 cut(s)	1493
Esp3I	CGTCTC	1 cut(s)	185
FaeI	CATG	5 cut(s)	442, 574, 1125, 1129, 1345
FalI	AAGNNNNNCTT	2 cut(s)	1486, 1518
FaqI	GGGAC	3 cut(s)	128, 1195, 1503
FatI	CATG	5 cut(s)	438, 570, 1121, 1125, 1341
FauI	CCCGC	2 cut(s)	200, 1548
FblI	GTMKAC	2 cut(s)	48, 1465
Fnu4HI	GCNGC	8 cut(s)	317, 399, 654, 836, 839, 1005, 1500, 1537
FokI	GGATG	5 cut(s)	112, 968, 1104, 1324, 1426
FriOI	GRGCYC	2 cut(s)	383, 510
Fsp4HI	GCNGC	8 cut(s)	317, 399, 654, 836, 839, 1005, 1500, 1537
FspBI	CTAG	3 cut(s)	1008, 1472, 1555
GlaI	GCGC	1 cut(s)	1312
GluI	GCNGC	8 cut(s)	317, 399, 654, 836, 839, 1005, 1500, 1537
GsaI	CCCAGC	1 cut(s)	548
GsuI	CTGGAG	1 cut(s)	1411
HaeII	RGCGCY	1 cut(s)	1314
HaeIII	GGCC	5 cut(s)	188, 428, 437, 890, 1492
HapII	CCGG	8 cut(s)	184, 207, 304, 320, 338, 347, 657, 899
HgaI	GACGC	2 cut(s)	71, 272
HhaI	GCGC	1 cut(s)	1313
Hin1I	GRCGYC	2 cut(s)	63, 264
Hin1II	CATG	5 cut(s)	442, 574, 1125, 1129, 1345
Hin6I	GCGC	1 cut(s)	1311
HinP1I	GCGC	1 cut(s)	1311
HincII	GTYRAC	2 cut(s)	49, 583
HindII	GTYRAC	2 cut(s)	49, 583
HpaII	CCGG	8 cut(s)	184, 207, 304, 320, 338, 347, 657, 899
HphI	GGTGA	5 cut(s)	431, 461, 692, 700, 1262
Hpy166II	GTNNAC	3 cut(s)	49, 583, 1466
Hpy188III	TCNNGA	3 cut(s)	332, 953, 1322
Hpy8I	GTNNAC	3 cut(s)	49, 583, 1466
HpyAV	CCTTC	7 cut(s)	685, 706, 841, 940, 1085, 1166, 1241
HpyCH4III	ACNGT	2 cut(s)	388, 1077
HpyCH4IV	ACGT	5 cut(s)	45, 51, 122, 539, 1291
HpyCH4V	TGCA	7 cut(s)	285, 442, 841, 914, 1125, 1295, 1337
HpyF10VI	GCNNNNNNNGC	5 cut(s)	434, 653, 659, 1122, 1505
HpySE526I	ACGT	5 cut(s)	45, 51, 122, 539, 1291
Hsp92I	GRCGYC	2 cut(s)	63, 264
Hsp92II	CATG	5 cut(s)	442, 574, 1125, 1129, 1345
HspAI	GCGC	1 cut(s)	1311
Kzo9I	GATC	2 cut(s)	112, 1056
LmnI	GCTCC	4 cut(s)	361, 513, 659, 1186
Lsp1109I	GCAGC	4 cut(s)	640, 825, 1486, 1548
LweI	GCATC	4 cut(s)	272, 1324, 1346, 1431
MaeI	CTAG	3 cut(s)	1008, 1472, 1555
MaeII	ACGT	5 cut(s)	45, 51, 122, 539, 1291
MaeIII	GTNAC	6 cut(s)	388, 419, 449, 535, 992, 1276
MalI	GATC	2 cut(s)	114, 1058
MbiI	CCGCTC	1 cut(s)	662
MboI	GATC	2 cut(s)	112, 1056
MboII	GAAGA	1 cut(s)	49
MfeI	CAATTG	1 cut(s)	501
MflI	RGATCY	1 cut(s)	1056
MhlI	GDGCHC	2 cut(s)	383, 510
MluCI	AATT	9 cut(s)	274, 307, 501, 513, 525, 562, 594, 637, 998
MlyI	GAGTC	6 cut(s)	209, 332, 416, 425, 695, 1217
MmeI	TCCRAC	1 cut(s)	188
Mph1103I	ATGCAT	2 cut(s)	1127, 1339
MseI	TTAA	5 cut(s)	462, 516, 1014, 1137, 1371
MslI	CAYNNNNRTG	1 cut(s)	1175
MspA1I	CMGCKG	1 cut(s)	838
MspI	CCGG	8 cut(s)	184, 207, 304, 320, 338, 347, 657, 899
MspR9I	CCNGG	5 cut(s)	185, 268, 338, 990, 1308
MunI	CAATTG	1 cut(s)	501
MvaI	CCWGG	3 cut(s)	268, 990, 1308
MwoI	GCNNNNNNNGC	5 cut(s)	434, 653, 659, 1122, 1505
NciI	CCSGG	2 cut(s)	185, 338
NdeII	GATC	2 cut(s)	112, 1056
NlaIII	CATG	5 cut(s)	442, 574, 1125, 1129, 1345
NlaIV	GGNNCC	4 cut(s)	336, 351, 509, 1182
NmeAIII	GCCGAG	3 cut(s)	221, 404, 413
NmuCI	GTSAC	4 cut(s)	419, 449, 992, 1276
NsiI	ATGCAT	2 cut(s)	1127, 1339
NspI	RCATGY	2 cut(s)	574, 1129
PcsI	WCGNNNNNNNCGW	5 cut(s)	57, 66, 69, 108, 144
PfeI	GAWTC	7 cut(s)	149, 328, 726, 1031, 1048, 1222, 1352
PflFI	GACNNNGTC	1 cut(s)	338
PinAI	ACCGGT	1 cut(s)	346
PkrI	GCNGC	8 cut(s)	318, 400, 655, 837, 840, 1006, 1501, 1538
PleI	GAGTC	6 cut(s)	209, 331, 416, 425, 695, 1216
PpsI	GAGTC	6 cut(s)	209, 331, 416, 425, 695, 1216
PpuMI	RGGWCCY	1 cut(s)	334
PshBI	ATTAAT	1 cut(s)	516
Psp1406I	AACGTT	1 cut(s)	539
Psp5II	RGGWCCY	1 cut(s)	334
Psp6I	CCWGG	3 cut(s)	266, 988, 1306
PspFI	CCCAGC	1 cut(s)	544
PspGI	CCWGG	3 cut(s)	266, 988, 1306
PspN4I	GGNNCC	4 cut(s)	336, 351, 509, 1182
PspPI	GGNCC	2 cut(s)	186, 334
PspPPI	RGGWCCY	1 cut(s)	334
PsrI	GAACNNNNNNTAC	2 cut(s)	851, 883
PstI	CTGCAG	1 cut(s)	843
PstNI	CAGNNNCTG	1 cut(s)	1081
PsuI	RGATCY	1 cut(s)	1056
PsyI	GACNNNGTC	1 cut(s)	338
RsaI	GTAC	4 cut(s)	821, 1040, 1074, 1548
RsaNI	GTAC	4 cut(s)	820, 1039, 1073, 1547
RseI	CAYNNNNRTG	1 cut(s)	1175
SalI	GTCGAC	1 cut(s)	47
SaqAI	TTAA	5 cut(s)	462, 516, 1014, 1137, 1371
SatI	GCNGC	8 cut(s)	317, 399, 654, 836, 839, 1005, 1500, 1537
Sau3AI	GATC	2 cut(s)	112, 1056
Sau96I	GGNCC	2 cut(s)	186, 334
SchI	GAGTC	6 cut(s)	209, 332, 416, 425, 695, 1217
ScrFI	CCNGG	5 cut(s)	185, 268, 338, 990, 1308
SduI	GDGCHC	2 cut(s)	383, 510
SfaNI	GCATC	4 cut(s)	272, 1324, 1346, 1431
SfcI	CTRYAG	1 cut(s)	839
SfiI	GGCCNNNNNGGCC	1 cut(s)	434
SgrDI	CGTCGACG	1 cut(s)	47
SinI	GGWCC	1 cut(s)	334
SmiMI	CAYNNNNRTG	1 cut(s)	1175
Sse9I	AATT	9 cut(s)	274, 307, 501, 513, 525, 562, 594, 637, 998
SspMI	CTAG	3 cut(s)	1008, 1472, 1555
StyD4I	CCNGG	5 cut(s)	183, 266, 336, 988, 1306
StyI	CCWWGG	1 cut(s)	1493
TaaI	ACNGT	2 cut(s)	388, 1077
TaiI	ACGT	5 cut(s)	48, 54, 125, 542, 1294
TaqI	TCGA	8 cut(s)	48, 60, 69, 138, 326, 342, 383, 1284
TaqII	GACCGA	1 cut(s)	426
TasI	AATT	9 cut(s)	274, 307, 501, 513, 525, 562, 594, 637, 998
TatI	WGTACW	1 cut(s)	1038
TauI	GCSGC	4 cut(s)	319, 401, 838, 1007
TfiI	GAWTC	7 cut(s)	149, 328, 726, 1031, 1048, 1222, 1352
Tru1I	TTAA	5 cut(s)	462, 516, 1014, 1137, 1371
Tru9I	TTAA	5 cut(s)	462, 516, 1014, 1137, 1371
TscAI	CASTG	1 cut(s)	891
TseFI	GTSAC	4 cut(s)	419, 449, 992, 1276
TseI	GCWGC	4 cut(s)	653, 838, 1499, 1536
Tsp45I	GTSAC	4 cut(s)	419, 449, 992, 1276
TspDTI	ATGAA	2 cut(s)	860, 1159
TspGWI	ACGGA	1 cut(s)	167
TspRI	CASTG	1 cut(s)	891
Tth111I	GACNNNGTC	1 cut(s)	338
VpaK11BI	GGWCC	1 cut(s)	334
VspI	ATTAAT	1 cut(s)	516
XapI	RAATTY	2 cut(s)	307, 637
XceI	RCATGY	2 cut(s)	574, 1129
XmiI	GTMKAC	2 cut(s)	48, 1465
XspI	CTAG	3 cut(s)	1008, 1472, 1555
Zsp2I	ATGCAT	2 cut(s)	1127, 1339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.