Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003222

Physical Location & Seq

Genomic Coordinates Forward (+)

86388071 .. 86391041

Gene Structure 2971 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00064530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGCTCATGAGTCATATATTTGTCGCTCTTTCCTCTCATCCAATCCCAACTCCAAATGGAACAAGATACCCGACTCCCAATCCCAAGCAACCACCTAAACGTCGACGTTTTCTTCGACGCCCTCGACGATTTCCTCCCTCCTCCGCCGACGCCGACGACGACCAACCCGATCACTCCACGTCATCCTCCACCCTCGATGTCCCCGATTCCAAACCCTCTCCGACCTCCCACCTCCGTCTCCGGCCCTCCCGCCGAGAACTCTCCGGCGACGACTCCAAGACCTCCACTTTACACTCCTCCCAAACCGACCCAATCAACGACGCCAGGCCCAGTTACCGAGGCAGAAAGTTCAGGCTTCGCCGGAATTTGAAGCCGCCGGAGTCGATTCAGGACCCCGTCGGACCGGTGCCAGCTCCGAGCGACCAGAAAGACGAGGGTTCGACTGTGACTACCGCCGCCGACGATGACCGAGGCGGTGACTCGGCCGACTCGGCCATGCAACTCGGTGACACTTCTTTCGACCCTCTTGTGTTCATAGCTGGGTTGGTAATCAAAGCAATTGGGCTCCAAATTAATCTGATAATTAGCATTGTAACGTTCCCAGCTTGGATTTTGTATAATTCTTACATGCTTTTGGTTGACCCTTTACAAATTGTGGGTAGAGGGAGAGAGTTTTTGAGGGCAAAGTTGGTAAATTTATCGGCATTGGCTGCCGGAGCGGTTAGTCCTTTGGTTGGTGAGTGGGTGAAGGACAAGGACTCGGTTTGGAAGGTGGCATTGCGATTCGGGTGGGGTTTGGTTTGGGCGTTTTATGTAGGTTTCTTGTTGTGTGGTCTTTTGGTGTCGTCGCTTGTGTTTAGTGGGGTTTTTATGAGGTACATTGTGGTCGAGCCGCTGCAGATGAAGGAAATGTTGAACTTTGATTACACCAAGCATAGTCCGGTGGCCTATGTGCCGGTGGTGTCGTGTGCAGGGGTCGGTTGTGGTGTGGATTGTAAAGAGAAGGTTCGGGATGGGGGGATTTTCGGGTATAGGGTTGTACCTCCTGGTCACAAATTGGCGGCTAGTGTTAAGTTTGTGTTGCCTGAATCGGAGTACAACAGGAATCTTGGGATCTTTCAGGTCAGGGTACAGTTCCTGTCTGCTCAAGGCAAAACCCTTGCCAGTTTGAGCCATCCATGCATGTTATATTTTAAAAGTGAGCCAATCCGCCTTCTATTGACGTTCATAAAGATTGCTCCTCTTATATCTGGCTACATTTCAGAGTCCCAAACTCTGAATCTGAAGTTCCGAGGGTTTGTGGAAGGTGATATTCCTACTGCCTGCTTGAAAGTGACAATCGAACAACGTGCAGAATACAATCCTGGCGCTGGTATTCCCGAAATATACGATGCATCCATGACCCTTGAATCGGAACTTCCCCTGTTTAAAAGGATTATATGGAACTGGAGGAGAACTTTATTTGTATGGATGAGTATGATGATGTTCATGATGGAGATGCTCTTTACTCTTGTCTGTTGTAGACCTCTAGTTATTCCGAGAGCAAGGCCAAGGGCTGCTGCTGTCAGCACCAGTCCCACTCAAACTCAAAGCAGCCCGCCGGTAAGAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006996 GO:0007275 GO:0008150 GO:0009791 GO:0009846 GO:0009856 GO:0009987 GO:0010154 GO:0010162 GO:0010431 GO:0010876 GO:0012505 GO:0016043 GO:0019915 GO:0021700 GO:0022414 GO:0022607 GO:0022611 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0034389 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0051179 GO:0051235 GO:0051704 GO:0061458 GO:0065007 GO:0065008 GO:0070925 GO:0071695 GO:0071840 GO:0080154 GO:0080155 GO:0140042 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Seipin

Protein Analysis

537

Amino Acids

59.72

Weight (kDa)

9.43

Isoelectric Point (pI)

49.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Seipin	PF06775	278 - 496	1e-50	Putative adipose-regulatory protein (Seipin)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29760 AT2G34380
fragaria_vesca	FvH4_3g07070 FvH4_3g17950 FvH4_3g17960 FvH4_6g08010
malus_domestica	MD00G1007100.v1.1 MD03G1246800.v1.1 MD11G1267400.v1.1
prunus_persica	Prupe.4G068800_v2.0.a1 Prupe.4G068800_v2.0.a1 Prupe.4G158100_v2.0.a1 Prupe.4G158200_v2.0.a1
pyrus_communis	pycom03g19590 pycom05g27230 pycom10g22850
rosa_chinensis	RchiOBHm_Chr5g0012061
rosa_laevigata	RLG00000031882 RLG00000033207 RLG00000033208 RLG00000034416
rosa_multiflora	Rmu_sc0002519.1_g000007 Rmu_sc0003368.1_g000013 Rmu_sc0018966.1_g000004
rosa_roxburghii	Rroxscaffold_1G00050020 Rroxscaffold_1G00064530
rosa_rugosa	Rorug04G0460500 Rorug05G0116300
rosa_samantha	Rh5AG092700 Rh5AG209300 Rh5BG088700 Rh5BG208200 Rh5CG102400 Rh5CG232000 Rh5DG089100
rosa_wichuraiana	Rw5G008100 Rw5G019060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	406
AccBSI	CCGCTC	1 cut(s)	719
AccI	GTMKAC	2 cut(s)	103, 1522
AclI	AACGTT	1 cut(s)	596
AclWI	GGATC	1 cut(s)	1121
AcoI	YGGCCR	2 cut(s)	483, 492
AcsI	RAATTY	2 cut(s)	364, 694
AcuI	CTGAAG	1 cut(s)	1304
AcyI	GRCGYC	3 cut(s)	118, 150, 321
AfaI	GTAC	4 cut(s)	878, 1041, 1097, 1131
AfiI	CCNNNNNNNGG	3 cut(s)	734, 1370, 1411
AgeI	ACCGGT	1 cut(s)	403
AgsI	TTSAA	4 cut(s)	370, 916, 1330, 1409
AjiI	CACGTC	1 cut(s)	180
AjnI	CCWGG	3 cut(s)	323, 1045, 1363
AluBI	AGCT	3 cut(s)	413, 539, 605
AluI	AGCT	3 cut(s)	413, 539, 605
Alw26I	GTCTC	1 cut(s)	242
AlwI	GGATC	1 cut(s)	1121
AlwNI	CAGNNNCTG	1 cut(s)	1138
AoxI	GGCC	6 cut(s)	242, 326, 483, 492, 945, 1547
ApeKI	GCWGC	5 cut(s)	710, 895, 1556, 1559, 1593
ApoI	RAATTY	2 cut(s)	364, 694
ArsI	GACNNNNNNTTYG	4 cut(s)	96, 128, 500, 532
AseI	ATTAAT	1 cut(s)	573
AsiGI	ACCGGT	1 cut(s)	403
AspLEI	GCGC	1 cut(s)	1370
AspS9I	GGNCC	4 cut(s)	243, 327, 391, 401
AsuHPI	GGTGA	5 cut(s)	488, 518, 749, 757, 1319
AvaII	GGWCC	2 cut(s)	391, 401
BanI	GGYRCC	1 cut(s)	406
BanII	GRGCYC	1 cut(s)	567
BbvI	GCAGC	5 cut(s)	697, 882, 1543, 1546, 1605
BccI	CCATC	3 cut(s)	1007, 1182, 1486
BcgI	CGANNNNNNTGC	2 cut(s)	1331, 1365
BciT130I	CCWGG	3 cut(s)	325, 1047, 1365
BcoDI	GTCTC	1 cut(s)	242
BfaI	CTAG	3 cut(s)	1065, 1529, 1612
BfmI	CTRYAG	1 cut(s)	896
BfoI	RGCGCY	1 cut(s)	1371
BglI	GCCNNNNNGGC	1 cut(s)	491
BisI	GCNGC	9 cut(s)	374, 456, 711, 893, 896, 1062, 1557, 1560, 1594
BlsI	GCNGC	9 cut(s)	375, 457, 712, 894, 897, 1063, 1558, 1561, 1595
Bme1390I	CCNGG	3 cut(s)	325, 1047, 1365
Bme18I	GGWCC	2 cut(s)	391, 401
BmgBI	CACGTC	1 cut(s)	180
BmgT120I	GGNCC	4 cut(s)	243, 327, 391, 401
BmiI	GGNNCC	3 cut(s)	393, 408, 566
BmrFI	CCNGG	3 cut(s)	325, 1047, 1365
BmrI	ACTGGG	1 cut(s)	324
BmsI	GCATC	3 cut(s)	1381, 1403, 1488
BmuI	ACTGGG	1 cut(s)	324
BpmI	CTGGAG	1 cut(s)	1468
BpuEI	CTTGAG	1 cut(s)	1131
BsaHI	GRCGYC	3 cut(s)	118, 150, 321
BsaJI	CCNNGG	4 cut(s)	337, 469, 1291, 1550
BsaWI	WCCGGW	2 cut(s)	403, 940
Bsc4I	CCNNNNNNNGG	3 cut(s)	734, 1370, 1411
Bse118I	RCCGGY	3 cut(s)	403, 955, 1600
Bse1I	ACTGG	4 cut(s)	330, 1164, 1451, 1572
Bse3DI	GCAATG	1 cut(s)	776
BseBI	CCWGG	3 cut(s)	325, 1047, 1365
BseDI	CCNNGG	4 cut(s)	337, 469, 1291, 1550
BseGI	GGATG	6 cut(s)	37, 182, 1018, 1174, 1394, 1476
BseLI	CCNNNNNNNGG	3 cut(s)	734, 1370, 1411
BseMI	GCAATG	1 cut(s)	776
BseNI	ACTGG	4 cut(s)	330, 1164, 1451, 1572
BseRI	GAGGAG	4 cut(s)	130, 286, 1230, 1465
BseX3I	CGGCCG	1 cut(s)	483
BseXI	GCAGC	5 cut(s)	697, 882, 1543, 1546, 1605
BseYI	CCCAGC	2 cut(s)	539, 601
BsgI	GTGCAG	2 cut(s)	990, 1371
Bsh1285I	CGRYCG	1 cut(s)	486
BshFI	GGCC	6 cut(s)	244, 328, 485, 494, 947, 1549
BshNI	GGYRCC	1 cut(s)	406
BshTI	ACCGGT	1 cut(s)	403
BsiEI	CGRYCG	1 cut(s)	486
BsiSI	CCGG	9 cut(s)	241, 264, 361, 377, 404, 714, 941, 956, 1601
BslFI	GGGAC	3 cut(s)	185, 1252, 1560
BslI	CCNNNNNNNGG	3 cut(s)	734, 1370, 1411
BsmAI	GTCTC	1 cut(s)	242
BsmBI	CGTCTC	1 cut(s)	242
BsmFI	GGGAC	3 cut(s)	185, 1252, 1560
BsnI	GGCC	6 cut(s)	244, 328, 485, 494, 947, 1549
Bsp1286I	GDGCHC	1 cut(s)	567
Bsp143I	GATC	2 cut(s)	169, 1113
BspANI	GGCC	6 cut(s)	244, 328, 485, 494, 947, 1549
BspHI	TCATGA	2 cut(s)	6, 1488
BspLI	GGNNCC	3 cut(s)	393, 408, 566
BspMAI	CTGCAG	1 cut(s)	900
BspPI	GGATC	1 cut(s)	1121
BspT107I	GGYRCC	1 cut(s)	406
BsrBI	CCGCTC	1 cut(s)	719
BsrDI	GCAATG	1 cut(s)	776
BsrFI	RCCGGY	3 cut(s)	403, 955, 1600
BsrI	ACTGG	4 cut(s)	330, 1164, 1451, 1572
BssAI	RCCGGY	3 cut(s)	403, 955, 1600
BssECI	CCNNGG	4 cut(s)	337, 469, 1291, 1550
BssMI	GATC	2 cut(s)	169, 1113
BssNI	GRCGYC	3 cut(s)	118, 150, 321
BssT1I	CCWWGG	1 cut(s)	1550
Bst2UI	CCWGG	3 cut(s)	325, 1047, 1365
Bst4CI	ACNGT	2 cut(s)	445, 1134
BstACI	GRCGYC	3 cut(s)	118, 150, 321
BstAPI	GCANNNNNTGC	1 cut(s)	710
BstC8I	GCNNGC	3 cut(s)	411, 1324, 1598
BstF5I	GGATG	6 cut(s)	37, 182, 1018, 1174, 1394, 1476
BstH2I	RGCGCY	1 cut(s)	1371
BstHHI	GCGC	1 cut(s)	1370
BstKTI	GATC	2 cut(s)	172, 1116
BstMAI	GTCTC	1 cut(s)	242
BstMBI	GATC	2 cut(s)	169, 1113
BstMCI	CGRYCG	1 cut(s)	486
BstMWI	GCNNNNNNNGC	4 cut(s)	491, 710, 716, 1179
BstNI	CCWGG	3 cut(s)	325, 1047, 1365
BstNSI	RCATGY	2 cut(s)	631, 1186
BstSCI	CCNGG	3 cut(s)	323, 1045, 1363
BstSFI	CTRYAG	1 cut(s)	896
BstV1I	GCAGC	5 cut(s)	697, 882, 1543, 1546, 1605
BstX2I	RGATCY	1 cut(s)	1113
BstYI	RGATCY	1 cut(s)	1113
BstZI	CGGCCG	1 cut(s)	483
BsuRI	GGCC	6 cut(s)	244, 328, 485, 494, 947, 1549
BtrI	CACGTC	1 cut(s)	180
BtsCI	GGATG	6 cut(s)	37, 182, 1018, 1174, 1394, 1476
Cac8I	GCNNGC	3 cut(s)	411, 1324, 1598
CaiI	CAGNNNCTG	1 cut(s)	1138
CciI	TCATGA	2 cut(s)	6, 1488
CfoI	GCGC	1 cut(s)	1370
Cfr10I	RCCGGY	3 cut(s)	403, 955, 1600
Cfr13I	GGNCC	4 cut(s)	243, 327, 391, 401
CpoI	CGGWCCG	1 cut(s)	401
CseI	GACGC	3 cut(s)	126, 158, 329
Csp6I	GTAC	4 cut(s)	877, 1040, 1096, 1130
CspAI	ACCGGT	1 cut(s)	403
CspI	CGGWCCG	1 cut(s)	401
CviAII	CATG	7 cut(s)	7, 496, 628, 1179, 1183, 1399, 1489
CviQI	GTAC	4 cut(s)	877, 1040, 1096, 1130
DpnI	GATC	2 cut(s)	171, 1115
DpnII	GATC	2 cut(s)	169, 1113
DraI	TTTAAA	2 cut(s)	1195, 1429
EaeI	YGGCCR	2 cut(s)	483, 492
EagI	CGGCCG	1 cut(s)	483
EciI	GGCGGA	2 cut(s)	133, 1199
EclXI	CGGCCG	1 cut(s)	483
Eco130I	CCWWGG	1 cut(s)	1550
Eco24I	GRGCYC	1 cut(s)	567
Eco47I	GGWCC	2 cut(s)	391, 401
Eco52I	CGGCCG	1 cut(s)	483
Eco57I	CTGAAG	1 cut(s)	1304
EcoO109I	RGGNCCY	1 cut(s)	391
EcoRII	CCWGG	3 cut(s)	323, 1045, 1363
EcoT14I	CCWWGG	1 cut(s)	1550
EcoT22I	ATGCAT	2 cut(s)	1184, 1396
EcoT38I	GRGCYC	1 cut(s)	567
ErhI	CCWWGG	1 cut(s)	1550
Esp3I	CGTCTC	1 cut(s)	242
FaeI	CATG	7 cut(s)	10, 499, 631, 1182, 1186, 1402, 1492
FaqI	GGGAC	3 cut(s)	185, 1252, 1560
FatI	CATG	7 cut(s)	6, 495, 627, 1178, 1182, 1398, 1488
FauI	CCCGC	2 cut(s)	257, 1605
FblI	GTMKAC	2 cut(s)	103, 1522
Fnu4HI	GCNGC	9 cut(s)	374, 456, 711, 893, 896, 1062, 1557, 1560, 1594
FokI	GGATG	6 cut(s)	24, 169, 1025, 1161, 1381, 1483
FriOI	GRGCYC	1 cut(s)	567
Fsp4HI	GCNGC	9 cut(s)	374, 456, 711, 893, 896, 1062, 1557, 1560, 1594
FspBI	CTAG	3 cut(s)	1065, 1529, 1612
GlaI	GCGC	1 cut(s)	1369
GluI	GCNGC	9 cut(s)	374, 456, 711, 893, 896, 1062, 1557, 1560, 1594
GsaI	CCCAGC	2 cut(s)	543, 605
GsuI	CTGGAG	1 cut(s)	1468
HaeII	RGCGCY	1 cut(s)	1371
HaeIII	GGCC	6 cut(s)	244, 328, 485, 494, 947, 1549
HapII	CCGG	9 cut(s)	241, 264, 361, 377, 404, 714, 941, 956, 1601
HgaI	GACGC	3 cut(s)	126, 158, 329
HhaI	GCGC	1 cut(s)	1370
Hin1I	GRCGYC	3 cut(s)	118, 150, 321
Hin1II	CATG	7 cut(s)	10, 499, 631, 1182, 1186, 1402, 1492
Hin6I	GCGC	1 cut(s)	1368
HinP1I	GCGC	1 cut(s)	1368
HincII	GTYRAC	2 cut(s)	104, 640
HindII	GTYRAC	2 cut(s)	104, 640
HpaII	CCGG	9 cut(s)	241, 264, 361, 377, 404, 714, 941, 956, 1601
HphI	GGTGA	5 cut(s)	488, 518, 749, 757, 1319
Hpy166II	GTNNAC	3 cut(s)	104, 640, 1523
Hpy188III	TCNNGA	5 cut(s)	7, 389, 1010, 1379, 1489
Hpy8I	GTNNAC	3 cut(s)	104, 640, 1523
HpyAV	CCTTC	6 cut(s)	742, 763, 898, 997, 1223, 1298
HpyCH4III	ACNGT	2 cut(s)	445, 1134
HpyCH4IV	ACGT	6 cut(s)	100, 106, 179, 596, 1223, 1348
HpyCH4V	TGCA	6 cut(s)	499, 898, 971, 1182, 1352, 1394
HpyF10VI	GCNNNNNNNGC	4 cut(s)	491, 710, 716, 1179
HpySE526I	ACGT	6 cut(s)	100, 106, 179, 596, 1223, 1348
Hsp92I	GRCGYC	3 cut(s)	118, 150, 321
Hsp92II	CATG	7 cut(s)	10, 499, 631, 1182, 1186, 1402, 1492
HspAI	GCGC	1 cut(s)	1368
Kzo9I	GATC	2 cut(s)	169, 1113
LmnI	GCTCC	4 cut(s)	418, 570, 716, 1243
Lsp1109I	GCAGC	5 cut(s)	697, 882, 1543, 1546, 1605
LweI	GCATC	3 cut(s)	1381, 1403, 1488
MaeI	CTAG	3 cut(s)	1065, 1529, 1612
MaeII	ACGT	6 cut(s)	100, 106, 179, 596, 1223, 1348
MaeIII	GTNAC	7 cut(s)	332, 445, 476, 506, 592, 1049, 1333
MalI	GATC	2 cut(s)	171, 1115
MbiI	CCGCTC	1 cut(s)	719
MboI	GATC	2 cut(s)	169, 1113
MboII	GAAGA	1 cut(s)	104
MfeI	CAATTG	1 cut(s)	558
MflI	RGATCY	1 cut(s)	1113
MhlI	GDGCHC	1 cut(s)	567
MluCI	AATT	8 cut(s)	364, 558, 570, 582, 619, 651, 694, 1055
MlyI	GAGTC	8 cut(s)	19, 67, 266, 389, 473, 482, 752, 1274
MmeI	TCCRAC	2 cut(s)	245, 379
Mph1103I	ATGCAT	2 cut(s)	1184, 1396
MseI	TTAA	4 cut(s)	573, 1071, 1194, 1428
MspA1I	CMGCKG	1 cut(s)	895
MspI	CCGG	9 cut(s)	241, 264, 361, 377, 404, 714, 941, 956, 1601
MspR9I	CCNGG	3 cut(s)	325, 1047, 1365
MunI	CAATTG	1 cut(s)	558
MvaI	CCWGG	3 cut(s)	325, 1047, 1365
MwoI	GCNNNNNNNGC	4 cut(s)	491, 710, 716, 1179
NdeII	GATC	2 cut(s)	169, 1113
NlaIII	CATG	7 cut(s)	10, 499, 631, 1182, 1186, 1402, 1492
NlaIV	GGNNCC	3 cut(s)	393, 408, 566
NmeAIII	GCCGAG	3 cut(s)	278, 461, 470
NmuCI	GTSAC	5 cut(s)	445, 476, 506, 1049, 1333
NsiI	ATGCAT	2 cut(s)	1184, 1396
NspI	RCATGY	2 cut(s)	631, 1186
PagI	TCATGA	2 cut(s)	6, 1488
PcsI	WCGNNNNNNNCGW	6 cut(s)	112, 121, 124, 156, 165, 201
PfeI	GAWTC	7 cut(s)	206, 385, 783, 1088, 1105, 1279, 1409
PflFI	GACNNNGTC	1 cut(s)	395
PinAI	ACCGGT	1 cut(s)	403
PkrI	GCNGC	9 cut(s)	375, 457, 712, 894, 897, 1063, 1558, 1561, 1595
PleI	GAGTC	8 cut(s)	18, 67, 266, 388, 473, 482, 752, 1273
PpsI	GAGTC	8 cut(s)	18, 67, 266, 388, 473, 482, 752, 1273
PpuMI	RGGWCCY	1 cut(s)	391
PshBI	ATTAAT	1 cut(s)	573
Psp1406I	AACGTT	1 cut(s)	596
Psp5II	RGGWCCY	1 cut(s)	391
Psp6I	CCWGG	3 cut(s)	323, 1045, 1363
PspFI	CCCAGC	2 cut(s)	539, 601
PspGI	CCWGG	3 cut(s)	323, 1045, 1363
PspN4I	GGNNCC	3 cut(s)	393, 408, 566
PspPI	GGNCC	4 cut(s)	243, 327, 391, 401
PspPPI	RGGWCCY	1 cut(s)	391
PsrI	GAACNNNNNNTAC	2 cut(s)	908, 940
PstI	CTGCAG	1 cut(s)	900
PstNI	CAGNNNCTG	1 cut(s)	1138
PsuI	RGATCY	1 cut(s)	1113
PsyI	GACNNNGTC	1 cut(s)	395
RsaI	GTAC	4 cut(s)	878, 1041, 1097, 1131
RsaNI	GTAC	4 cut(s)	877, 1040, 1096, 1130
Rsr2I	CGGWCCG	1 cut(s)	401
RsrII	CGGWCCG	1 cut(s)	401
SalI	GTCGAC	1 cut(s)	102
SaqAI	TTAA	4 cut(s)	573, 1071, 1194, 1428
SatI	GCNGC	9 cut(s)	374, 456, 711, 893, 896, 1062, 1557, 1560, 1594
Sau3AI	GATC	2 cut(s)	169, 1113
Sau96I	GGNCC	4 cut(s)	243, 327, 391, 401
SchI	GAGTC	8 cut(s)	19, 67, 266, 389, 473, 482, 752, 1274
ScrFI	CCNGG	3 cut(s)	325, 1047, 1365
SduI	GDGCHC	1 cut(s)	567
SfaNI	GCATC	3 cut(s)	1381, 1403, 1488
SfcI	CTRYAG	1 cut(s)	896
SfiI	GGCCNNNNNGGCC	1 cut(s)	491
SgrDI	CGTCGACG	1 cut(s)	102
SinI	GGWCC	2 cut(s)	391, 401
SmlI	CTYRAG	1 cut(s)	1146
SmoI	CTYRAG	1 cut(s)	1146
Sse9I	AATT	8 cut(s)	364, 558, 570, 582, 619, 651, 694, 1055
SspMI	CTAG	3 cut(s)	1065, 1529, 1612
StyD4I	CCNGG	3 cut(s)	323, 1045, 1363
StyI	CCWWGG	1 cut(s)	1550
TaaI	ACNGT	2 cut(s)	445, 1134
TaiI	ACGT	6 cut(s)	103, 109, 182, 599, 1226, 1351
TaqI	TCGA	9 cut(s)	103, 115, 124, 195, 383, 440, 519, 888, 1341
TaqII	GACCGA	1 cut(s)	483
TasI	AATT	8 cut(s)	364, 558, 570, 582, 619, 651, 694, 1055
TatI	WGTACW	1 cut(s)	1095
TauI	GCSGC	4 cut(s)	376, 458, 895, 1064
TfiI	GAWTC	7 cut(s)	206, 385, 783, 1088, 1105, 1279, 1409
Tru1I	TTAA	4 cut(s)	573, 1071, 1194, 1428
Tru9I	TTAA	4 cut(s)	573, 1071, 1194, 1428
TseFI	GTSAC	5 cut(s)	445, 476, 506, 1049, 1333
TseI	GCWGC	5 cut(s)	710, 895, 1556, 1559, 1593
Tsp45I	GTSAC	5 cut(s)	445, 476, 506, 1049, 1333
TspDTI	ATGAA	4 cut(s)	523, 917, 1216, 1477
TspGWI	ACGGA	1 cut(s)	224
Tth111I	GACNNNGTC	1 cut(s)	395
VpaK11BI	GGWCC	2 cut(s)	391, 401
VspI	ATTAAT	1 cut(s)	573
XapI	RAATTY	2 cut(s)	364, 694
XceI	RCATGY	2 cut(s)	631, 1186
XmiI	GTMKAC	2 cut(s)	103, 1522
XspI	CTAG	3 cut(s)	1065, 1529, 1612
Zsp2I	ATGCAT	2 cut(s)	1184, 1396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.