Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0003222

Physical Location & Seq

Genomic Coordinates Reverse (-)

8375960 .. 8379245

Gene Structure 3286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG092700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGGAACAAGATACCCAACTCCCAATCCCAAGCAACCACCAAAACGTCGACGTTTTCTTCGACGCCCTCGACGATTTCCCTCCCTCCTCCGCCGACGACGACCAACCCGATCAATCCACGTCATCCTCCACCCTCGATGGCCCCGATTCCAAACCCTCTCCGACCTCCCACCTCCGTCTCCGGCCCTCCCGCCGAGAACTCTCCGGCGACGACTCCAAGACCTCCACTTTACAATCCTCCCAAACCGACCCAATCAACGACGCCAGGCTCAATTACCGAGGCAGAAAGTTCAGACTTCGCCGGAATTTGAAGCCGCCGGAGTCGATTCAGGACCCGGTCGAACCGGTGCCGGCTCCGAGCGACCAGAAAGACGAGGGCTCGACTGTAACTACCGCCGCCGACGATGACCGAGGCGGTGACTCGGCCGACTCGGCCATGCAACTCGGTGACACTTCTTTTAACCCTCTTGTGTTCGTAGCTGGATTGATAATCAAAGCAATTGGGCTCCAAATTAATCTGATAATTAGCATTGTAACGTTCCCAGCTTGGATTTTGTATAATTCTTACATGCTTTTGGTTGACCCTTTACAAATTGTGGGTAGAGGGAGAGAGTTTTTTAGCGCAAAGTTGGTAAATTTATCGGCATTGGCTGCCGGAGCGGTTAGTCCTTTGGTTGGTGAGTGGGTGAAGGACAAGGACTCGGTTTGGAAGGTGGCATTGCGATTCGGGTGGGGTTTGGTTTGGGCGTTTTATGTAGGTTTTTTGTTGTGTGGTCTTTTGGTGTCGTCGCTTGTGTTTAGTGGGGTTTTTATGAGGTACATTGTGGTCGAGCCGCTGCAGATGAAGGAAATGTTGAACCTTGATTACACAAAGTATAGTCCAGTGGCCTATGTGCCGGTGGTGTCGTGTGCAGGGGTCGGTTGTGGTGTGGATTGTAAAGAGAAGGTTCGGGATGGGGGGATTTTCGGGTATAGGGTTATACCTCCTGGTCACAAATTGGCTGCTATTGTTAAGTTTGTGTTGCCTGAATCGGAGTACAACAGGAATCTTGGGATCTTTCAGGTCAGGGTACAGTTCCTGTCTGCTGAAGGCAAAACCCTTGCCAGTTTGAGCCATCCATGCATGTTATATTTTAAAAGTGAGCCAATCCGCCTTCTATTGACGTTCATAAAGATTGCTCCTCTTATATCTGGCTACATTTCAGAGTCCCAAACTCTGAATCTGAAGTTCCGAGGGTTTGTGGAAGGTGATATTCCTACTGCCTGCTTGAAAGTGACAATCGAACAACGTGCAGAATACAATCCTGGCGCTGGTATTCCCGAAATATACGATGCATCCATGACCCTTGAATCGGAACTTCCCCTGTTTAAAAGGATTATATGGAACTGGAGGAGAACTTTATTTGTTTGGATGAGTATGATGATGTTTATGATGGAGATGCTCTTTACTCTTGTCTGTTGTAGACCTCTAGTTATTCCGAGAGCAAGGCCAAGGGCTGCTTCTGCCAGCACCAGTCCCACTCAAACTCAAAGCAGCCCGCCGGTACAAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006996 GO:0007275 GO:0008150 GO:0009791 GO:0009846 GO:0009856 GO:0009987 GO:0010154 GO:0010162 GO:0010431 GO:0010876 GO:0012505 GO:0016043 GO:0019915 GO:0021700 GO:0022414 GO:0022607 GO:0022611 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0034389 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0051179 GO:0051235 GO:0051704 GO:0061458 GO:0065007 GO:0065008 GO:0070925 GO:0071695 GO:0071840 GO:0080154 GO:0080155 GO:0140042 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Seipin

Protein Analysis

517

Amino Acids

57.33

Weight (kDa)

5.96

Isoelectric Point (pI)

43.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Seipin	PF06775	258 - 476	1.1e-49	Putative adipose-regulatory protein (Seipin)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29760 AT2G34380
fragaria_vesca	FvH4_3g07070 FvH4_3g17950 FvH4_3g17960 FvH4_6g08010
malus_domestica	MD00G1007100.v1.1 MD03G1246800.v1.1 MD11G1267400.v1.1
prunus_persica	Prupe.4G068800_v2.0.a1 Prupe.4G068800_v2.0.a1 Prupe.4G158100_v2.0.a1 Prupe.4G158200_v2.0.a1
pyrus_communis	pycom03g19590 pycom05g27230 pycom10g22850
rosa_chinensis	RchiOBHm_Chr5g0012061
rosa_laevigata	RLG00000031882 RLG00000033207 RLG00000033208 RLG00000034416
rosa_multiflora	Rmu_sc0002519.1_g000007 Rmu_sc0003368.1_g000013 Rmu_sc0018966.1_g000004
rosa_roxburghii	Rroxscaffold_1G00050020 Rroxscaffold_1G00064530
rosa_rugosa	Rorug04G0460500 Rorug05G0116300
rosa_samantha	Rh5AG092700 Rh5AG209300 Rh5BG088700 Rh5BG208200 Rh5CG102400 Rh5CG232000 Rh5DG089100
rosa_wichuraiana	Rw5G008100 Rw5G019060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	346
AccBSI	CCGCTC	1 cut(s)	659
AccI	GTMKAC	2 cut(s)	48, 1462
AclI	AACGTT	1 cut(s)	536
AclWI	GGATC	1 cut(s)	1061
AcoI	YGGCCR	2 cut(s)	423, 432
AcsI	RAATTY	2 cut(s)	304, 634
AcuI	CTGAAG	2 cut(s)	1107, 1244
AcyI	GRCGYC	2 cut(s)	63, 261
AfaI	GTAC	4 cut(s)	818, 1037, 1071, 1545
AfiI	CCNNNNNNNGG	3 cut(s)	674, 1310, 1351
AgeI	ACCGGT	1 cut(s)	343
AgsI	TTSAA	4 cut(s)	310, 856, 1270, 1349
AjiI	CACGTC	1 cut(s)	120
AjnI	CCWGG	3 cut(s)	263, 985, 1303
AjuI	GAANNNNNNNTTGG	2 cut(s)	1483, 1515
AluBI	AGCT	2 cut(s)	479, 545
AluI	AGCT	2 cut(s)	479, 545
Alw26I	GTCTC	1 cut(s)	182
AlwI	GGATC	1 cut(s)	1061
AlwNI	CAGNNNCTG	1 cut(s)	1078
AoxI	GGCC	6 cut(s)	139, 182, 423, 432, 885, 1487
ApeKI	GCWGC	5 cut(s)	650, 835, 1001, 1496, 1533
ApoI	RAATTY	2 cut(s)	304, 634
ArsI	GACNNNNNNTTYG	2 cut(s)	41, 73
AseI	ATTAAT	1 cut(s)	513
AsiGI	ACCGGT	1 cut(s)	343
AspLEI	GCGC	2 cut(s)	623, 1310
AspS9I	GGNCC	3 cut(s)	140, 183, 331
AsuC2I	CCSGG	1 cut(s)	335
AsuHPI	GGTGA	5 cut(s)	428, 458, 689, 697, 1259
AvaII	GGWCC	1 cut(s)	331
BanI	GGYRCC	1 cut(s)	346
BanII	GRGCYC	2 cut(s)	380, 507
BbvI	GCAGC	5 cut(s)	637, 822, 988, 1483, 1545
BccI	CCATC	4 cut(s)	131, 947, 1122, 1426
BcgI	CGANNNNNNTGC	2 cut(s)	1271, 1305
BciT130I	CCWGG	3 cut(s)	265, 987, 1305
BcnI	CCSGG	1 cut(s)	335
BcoDI	GTCTC	1 cut(s)	182
BfaI	CTAG	2 cut(s)	1469, 1552
BfmI	CTRYAG	1 cut(s)	836
BfoI	RGCGCY	1 cut(s)	1311
BglI	GCCNNNNNGGC	1 cut(s)	431
BisI	GCNGC	8 cut(s)	314, 396, 651, 833, 836, 1002, 1497, 1534
BlsI	GCNGC	8 cut(s)	315, 397, 652, 834, 837, 1003, 1498, 1535
Bme1390I	CCNGG	4 cut(s)	265, 335, 987, 1305
Bme18I	GGWCC	1 cut(s)	331
BmgBI	CACGTC	1 cut(s)	120
BmgT120I	GGNCC	3 cut(s)	140, 183, 331
BmiI	GGNNCC	5 cut(s)	142, 333, 348, 354, 506
BmrFI	CCNGG	4 cut(s)	265, 335, 987, 1305
BmsI	GCATC	3 cut(s)	1321, 1343, 1428
BpmI	CTGGAG	1 cut(s)	1408
BpuMI	CCSGG	1 cut(s)	335
BsaHI	GRCGYC	2 cut(s)	63, 261
BsaJI	CCNNGG	4 cut(s)	277, 409, 1231, 1490
BsaWI	WCCGGW	1 cut(s)	343
Bsc4I	CCNNNNNNNGG	3 cut(s)	674, 1310, 1351
Bse118I	RCCGGY	4 cut(s)	343, 349, 895, 1540
Bse1I	ACTGG	4 cut(s)	881, 1104, 1391, 1512
Bse3DI	GCAATG	1 cut(s)	716
BseBI	CCWGG	3 cut(s)	265, 987, 1305
BseDI	CCNNGG	4 cut(s)	277, 409, 1231, 1490
BseGI	GGATG	5 cut(s)	122, 958, 1114, 1334, 1416
BseLI	CCNNNNNNNGG	3 cut(s)	674, 1310, 1351
BseMI	GCAATG	1 cut(s)	716
BseNI	ACTGG	4 cut(s)	881, 1104, 1391, 1512
BseRI	GAGGAG	3 cut(s)	76, 1170, 1405
BseX3I	CGGCCG	1 cut(s)	423
BseXI	GCAGC	5 cut(s)	637, 822, 988, 1483, 1545
BseYI	CCCAGC	1 cut(s)	541
BsgI	GTGCAG	2 cut(s)	930, 1311
Bsh1285I	CGRYCG	2 cut(s)	339, 426
BshFI	GGCC	6 cut(s)	141, 184, 425, 434, 887, 1489
BshNI	GGYRCC	1 cut(s)	346
BshTI	ACCGGT	1 cut(s)	343
BsiEI	CGRYCG	2 cut(s)	339, 426
BslFI	GGGAC	2 cut(s)	1192, 1500
BslI	CCNNNNNNNGG	3 cut(s)	674, 1310, 1351
BsmAI	GTCTC	1 cut(s)	182
BsmBI	CGTCTC	1 cut(s)	182
BsmFI	GGGAC	2 cut(s)	1192, 1500
BsnI	GGCC	6 cut(s)	141, 184, 425, 434, 887, 1489
Bsp1286I	GDGCHC	2 cut(s)	380, 507
Bsp143I	GATC	2 cut(s)	109, 1053
BspANI	GGCC	6 cut(s)	141, 184, 425, 434, 887, 1489
BspLI	GGNNCC	5 cut(s)	142, 333, 348, 354, 506
BspMAI	CTGCAG	1 cut(s)	840
BspPI	GGATC	1 cut(s)	1061
BspT107I	GGYRCC	1 cut(s)	346
BsrBI	CCGCTC	1 cut(s)	659
BsrDI	GCAATG	1 cut(s)	716
BsrFI	RCCGGY	4 cut(s)	343, 349, 895, 1540
BsrI	ACTGG	4 cut(s)	881, 1104, 1391, 1512
BssAI	RCCGGY	4 cut(s)	343, 349, 895, 1540
BssECI	CCNNGG	4 cut(s)	277, 409, 1231, 1490
BssMI	GATC	2 cut(s)	109, 1053
BssNI	GRCGYC	2 cut(s)	63, 261
BssT1I	CCWWGG	1 cut(s)	1490
Bst2UI	CCWGG	3 cut(s)	265, 987, 1305
Bst4CI	ACNGT	2 cut(s)	385, 1074
BstACI	GRCGYC	2 cut(s)	63, 261
BstAPI	GCANNNNNTGC	1 cut(s)	650
BstC8I	GCNNGC	4 cut(s)	351, 1264, 1507, 1538
BstF5I	GGATG	5 cut(s)	122, 958, 1114, 1334, 1416
BstH2I	RGCGCY	1 cut(s)	1311
BstHHI	GCGC	2 cut(s)	623, 1310
BstKTI	GATC	2 cut(s)	112, 1056
BstMAI	GTCTC	1 cut(s)	182
BstMBI	GATC	2 cut(s)	109, 1053
BstMCI	CGRYCG	2 cut(s)	339, 426
BstMWI	GCNNNNNNNGC	5 cut(s)	431, 650, 656, 1119, 1502
BstNI	CCWGG	3 cut(s)	265, 987, 1305
BstNSI	RCATGY	2 cut(s)	571, 1126
BstSCI	CCNGG	4 cut(s)	263, 333, 985, 1303
BstSFI	CTRYAG	1 cut(s)	836
BstV1I	GCAGC	5 cut(s)	637, 822, 988, 1483, 1545
BstX2I	RGATCY	1 cut(s)	1053
BstYI	RGATCY	1 cut(s)	1053
BstZI	CGGCCG	1 cut(s)	423
BsuRI	GGCC	6 cut(s)	141, 184, 425, 434, 887, 1489
BtrI	CACGTC	1 cut(s)	120
BtsCI	GGATG	5 cut(s)	122, 958, 1114, 1334, 1416
BtsIMutI	CAGTG	1 cut(s)	888
Cac8I	GCNNGC	4 cut(s)	351, 1264, 1507, 1538
CaiI	CAGNNNCTG	1 cut(s)	1078
CfoI	GCGC	2 cut(s)	623, 1310
Cfr10I	RCCGGY	4 cut(s)	343, 349, 895, 1540
Cfr13I	GGNCC	3 cut(s)	140, 183, 331
CseI	GACGC	2 cut(s)	71, 269
Csp6I	GTAC	4 cut(s)	817, 1036, 1070, 1544
CspAI	ACCGGT	1 cut(s)	343
CviAII	CATG	5 cut(s)	436, 568, 1119, 1123, 1339
CviQI	GTAC	4 cut(s)	817, 1036, 1070, 1544
DpnI	GATC	2 cut(s)	111, 1055
DpnII	GATC	2 cut(s)	109, 1053
DraI	TTTAAA	2 cut(s)	1135, 1369
EaeI	YGGCCR	2 cut(s)	423, 432
EagI	CGGCCG	1 cut(s)	423
EciI	GGCGGA	2 cut(s)	79, 1139
EclXI	CGGCCG	1 cut(s)	423
Eco130I	CCWWGG	1 cut(s)	1490
Eco24I	GRGCYC	2 cut(s)	380, 507
Eco47I	GGWCC	1 cut(s)	331
Eco52I	CGGCCG	1 cut(s)	423
Eco57I	CTGAAG	2 cut(s)	1107, 1244
EcoO109I	RGGNCCY	1 cut(s)	331
EcoRII	CCWGG	3 cut(s)	263, 985, 1303
EcoT14I	CCWWGG	1 cut(s)	1490
EcoT22I	ATGCAT	2 cut(s)	1124, 1336
EcoT38I	GRGCYC	2 cut(s)	380, 507
ErhI	CCWWGG	1 cut(s)	1490
Esp3I	CGTCTC	1 cut(s)	182
FaeI	CATG	5 cut(s)	439, 571, 1122, 1126, 1342
FalI	AAGNNNNNCTT	2 cut(s)	1483, 1515
FaqI	GGGAC	2 cut(s)	1192, 1500
FatI	CATG	5 cut(s)	435, 567, 1118, 1122, 1338
FauI	CCCGC	2 cut(s)	197, 1545
FblI	GTMKAC	2 cut(s)	48, 1462
Fnu4HI	GCNGC	8 cut(s)	314, 396, 651, 833, 836, 1002, 1497, 1534
FokI	GGATG	5 cut(s)	109, 965, 1101, 1321, 1423
FriOI	GRGCYC	2 cut(s)	380, 507
Fsp4HI	GCNGC	8 cut(s)	314, 396, 651, 833, 836, 1002, 1497, 1534
FspBI	CTAG	2 cut(s)	1469, 1552
GlaI	GCGC	2 cut(s)	622, 1309
GluI	GCNGC	8 cut(s)	314, 396, 651, 833, 836, 1002, 1497, 1534
GsaI	CCCAGC	1 cut(s)	545
GsuI	CTGGAG	1 cut(s)	1408
HaeII	RGCGCY	1 cut(s)	1311
HaeIII	GGCC	6 cut(s)	141, 184, 425, 434, 887, 1489
HgaI	GACGC	2 cut(s)	71, 269
HhaI	GCGC	2 cut(s)	623, 1310
Hin1I	GRCGYC	2 cut(s)	63, 261
Hin1II	CATG	5 cut(s)	439, 571, 1122, 1126, 1342
Hin6I	GCGC	2 cut(s)	621, 1308
HinP1I	GCGC	2 cut(s)	621, 1308
HincII	GTYRAC	2 cut(s)	49, 580
HindII	GTYRAC	2 cut(s)	49, 580
HphI	GGTGA	5 cut(s)	428, 458, 689, 697, 1259
Hpy166II	GTNNAC	3 cut(s)	49, 580, 1463
Hpy188III	TCNNGA	3 cut(s)	329, 950, 1319
Hpy8I	GTNNAC	3 cut(s)	49, 580, 1463
HpyAV	CCTTC	7 cut(s)	682, 703, 838, 937, 1082, 1163, 1238
HpyCH4III	ACNGT	2 cut(s)	385, 1074
HpyCH4IV	ACGT	6 cut(s)	45, 51, 119, 536, 1163, 1288
HpyCH4V	TGCA	6 cut(s)	439, 838, 911, 1122, 1292, 1334
HpyF10VI	GCNNNNNNNGC	5 cut(s)	431, 650, 656, 1119, 1502
HpySE526I	ACGT	6 cut(s)	45, 51, 119, 536, 1163, 1288
Hsp92I	GRCGYC	2 cut(s)	63, 261
Hsp92II	CATG	5 cut(s)	439, 571, 1122, 1126, 1342
HspAI	GCGC	2 cut(s)	621, 1308
KroI	GCCGGC	1 cut(s)	349
KroNI	GCCGGC	1 cut(s)	351
Kzo9I	GATC	2 cut(s)	109, 1053
LmnI	GCTCC	4 cut(s)	358, 510, 656, 1183
Lsp1109I	GCAGC	5 cut(s)	637, 822, 988, 1483, 1545
LweI	GCATC	3 cut(s)	1321, 1343, 1428
MaeI	CTAG	2 cut(s)	1469, 1552
MaeII	ACGT	6 cut(s)	45, 51, 119, 536, 1163, 1288
MaeIII	GTNAC	6 cut(s)	385, 416, 446, 532, 989, 1273
MalI	GATC	2 cut(s)	111, 1055
MbiI	CCGCTC	1 cut(s)	659
MboI	GATC	2 cut(s)	109, 1053
MboII	GAAGA	1 cut(s)	49
MfeI	CAATTG	1 cut(s)	498
MflI	RGATCY	1 cut(s)	1053
MhlI	GDGCHC	2 cut(s)	380, 507
MluCI	AATT	9 cut(s)	271, 304, 498, 510, 522, 559, 591, 634, 995
MlyI	GAGTC	6 cut(s)	206, 329, 413, 422, 692, 1214
MmeI	TCCRAC	1 cut(s)	185
Mph1103I	ATGCAT	2 cut(s)	1124, 1336
MroNI	GCCGGC	1 cut(s)	349
MseI	TTAA	5 cut(s)	459, 513, 1011, 1134, 1368
MspA1I	CMGCKG	1 cut(s)	835
MspR9I	CCNGG	4 cut(s)	265, 335, 987, 1305
MunI	CAATTG	1 cut(s)	498
MvaI	CCWGG	3 cut(s)	265, 987, 1305
MwoI	GCNNNNNNNGC	5 cut(s)	431, 650, 656, 1119, 1502
NaeI	GCCGGC	1 cut(s)	351
NciI	CCSGG	1 cut(s)	335
NdeII	GATC	2 cut(s)	109, 1053
NgoMIV	GCCGGC	1 cut(s)	349
NlaIII	CATG	5 cut(s)	439, 571, 1122, 1126, 1342
NlaIV	GGNNCC	5 cut(s)	142, 333, 348, 354, 506
NmeAIII	GCCGAG	3 cut(s)	218, 401, 410
NmuCI	GTSAC	4 cut(s)	416, 446, 989, 1273
NsiI	ATGCAT	2 cut(s)	1124, 1336
NspI	RCATGY	2 cut(s)	571, 1126
PcsI	WCGNNNNNNNCGW	5 cut(s)	57, 66, 69, 105, 141
PdiI	GCCGGC	1 cut(s)	351
PfeI	GAWTC	7 cut(s)	146, 325, 723, 1028, 1045, 1219, 1349
PflFI	GACNNNGTC	1 cut(s)	335
PinAI	ACCGGT	1 cut(s)	343
PkrI	GCNGC	8 cut(s)	315, 397, 652, 834, 837, 1003, 1498, 1535
PleI	GAGTC	6 cut(s)	206, 328, 413, 422, 692, 1213
PpsI	GAGTC	6 cut(s)	206, 328, 413, 422, 692, 1213
PpuMI	RGGWCCY	1 cut(s)	331
PshBI	ATTAAT	1 cut(s)	513
Psp1406I	AACGTT	1 cut(s)	536
Psp5II	RGGWCCY	1 cut(s)	331
Psp6I	CCWGG	3 cut(s)	263, 985, 1303
PspFI	CCCAGC	1 cut(s)	541
PspGI	CCWGG	3 cut(s)	263, 985, 1303
PspN4I	GGNNCC	5 cut(s)	142, 333, 348, 354, 506
PspPI	GGNCC	3 cut(s)	140, 183, 331
PspPPI	RGGWCCY	1 cut(s)	331
PsrI	GAACNNNNNNTAC	2 cut(s)	848, 880
PstI	CTGCAG	1 cut(s)	840
PstNI	CAGNNNCTG	1 cut(s)	1078
PsuI	RGATCY	1 cut(s)	1053
PsyI	GACNNNGTC	1 cut(s)	335
RsaI	GTAC	4 cut(s)	818, 1037, 1071, 1545
RsaNI	GTAC	4 cut(s)	817, 1036, 1070, 1544
SalI	GTCGAC	1 cut(s)	47
SaqAI	TTAA	5 cut(s)	459, 513, 1011, 1134, 1368
SatI	GCNGC	8 cut(s)	314, 396, 651, 833, 836, 1002, 1497, 1534
Sau3AI	GATC	2 cut(s)	109, 1053
Sau96I	GGNCC	3 cut(s)	140, 183, 331
SchI	GAGTC	6 cut(s)	206, 329, 413, 422, 692, 1214
ScrFI	CCNGG	4 cut(s)	265, 335, 987, 1305
SduI	GDGCHC	2 cut(s)	380, 507
SfaNI	GCATC	3 cut(s)	1321, 1343, 1428
SfcI	CTRYAG	1 cut(s)	836
SfiI	GGCCNNNNNGGCC	1 cut(s)	431
SgrDI	CGTCGACG	1 cut(s)	47
SinI	GGWCC	1 cut(s)	331
Sse9I	AATT	9 cut(s)	271, 304, 498, 510, 522, 559, 591, 634, 995
SspMI	CTAG	2 cut(s)	1469, 1552
StyD4I	CCNGG	4 cut(s)	263, 333, 985, 1303
StyI	CCWWGG	1 cut(s)	1490
TaaI	ACNGT	2 cut(s)	385, 1074
TaiI	ACGT	6 cut(s)	48, 54, 122, 539, 1166, 1291
TaqI	TCGA	9 cut(s)	48, 60, 69, 135, 323, 339, 380, 828, 1281
TaqII	GACCGA	1 cut(s)	423
TasI	AATT	9 cut(s)	271, 304, 498, 510, 522, 559, 591, 634, 995
TatI	WGTACW	1 cut(s)	1035
TauI	GCSGC	3 cut(s)	316, 398, 835
TfiI	GAWTC	7 cut(s)	146, 325, 723, 1028, 1045, 1219, 1349
Tru1I	TTAA	5 cut(s)	459, 513, 1011, 1134, 1368
Tru9I	TTAA	5 cut(s)	459, 513, 1011, 1134, 1368
TscAI	CASTG	1 cut(s)	888
TseFI	GTSAC	4 cut(s)	416, 446, 989, 1273
TseI	GCWGC	5 cut(s)	650, 835, 1001, 1496, 1533
Tsp45I	GTSAC	4 cut(s)	416, 446, 989, 1273
TspDTI	ATGAA	2 cut(s)	857, 1156
TspGWI	ACGGA	1 cut(s)	164
TspRI	CASTG	1 cut(s)	888
Tth111I	GACNNNGTC	1 cut(s)	335
VpaK11BI	GGWCC	1 cut(s)	331
VspI	ATTAAT	1 cut(s)	513
XapI	RAATTY	2 cut(s)	304, 634
XceI	RCATGY	2 cut(s)	571, 1126
XmiI	GTMKAC	2 cut(s)	48, 1462
XspI	CTAG	2 cut(s)	1469, 1552
Zsp2I	ATGCAT	2 cut(s)	1124, 1336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.