RchiOBHm_Chr5g0059421

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0003955
Physical Location & Seq
Forward (+)
64333049 .. 64334675
1627 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33602

Sequence Viewer

Length: 330 bp
ATGAAAAAAAACTCAAACAATATAAGACGAACTGAACTCAACCTCGATGAAGCCGAACTGACCTCGACCTCAACTTCTGACTTCGAACTGACCTCAACCTTTCTTTATTCTCTACTAACCAAGGTGTTGGCTGATTTGCACAAGAAATATGGCTCTGTTGTGAAGTTGTGGTTGGGACCAACTCAGCTTTTAGTGTCAATAAAGGATCCAACTCTTATCAGAGACATGCTACTAAAGGCTGCAAATAATTTGCCTAAGACTGGGAGGGCATTCCATTTGGCCTCTGGAAGGTCAAGCCTTTGGAGAATTTCAAGGGCATTAGTACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04726 map04726
Pfam Domains
Protein Families
p450

Protein Analysis

109

Amino Acids

12.26

Weight (kDa)

10.07

Isoelectric Point (pI)

31.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 200, 213
AcsI RAATTY 1 cut(s) 306
AfaI GTAC 1 cut(s) 324
AfiI CCNNNNNNNGG 2 cut(s) 260, 288
AgsI TTSAA 1 cut(s) 312
AjuI GAANNNNNNNTTGG 2 cut(s) 155, 187
AluBI AGCT 1 cut(s) 187
AluI AGCT 1 cut(s) 187
Alw26I GTCTC 1 cut(s) 216
AlwI GGATC 2 cut(s) 200, 213
AoxI GGCC 1 cut(s) 279
ApeKI GCWGC 1 cut(s) 239
ApoI RAATTY 1 cut(s) 306
AspS9I GGNCC 1 cut(s) 176
AsuII TTCGAA 1 cut(s) 84
AvaII GGWCC 1 cut(s) 176
BamHI GGATCC 1 cut(s) 205
BbvI GCAGC 1 cut(s) 226
BcoDI GTCTC 1 cut(s) 216
BisI GCNGC 1 cut(s) 240
BlsI GCNGC 1 cut(s) 241
Bme18I GGWCC 1 cut(s) 176
BmgT120I GGNCC 1 cut(s) 176
BmiI GGNNCC 2 cut(s) 177, 207
BmrI ACTGGG 1 cut(s) 270
BmuI ACTGGG 1 cut(s) 270
Bpu14I TTCGAA 1 cut(s) 84
BsaJI CCNNGG 1 cut(s) 120
Bsc4I CCNNNNNNNGG 2 cut(s) 260, 288
Bse1I ACTGG 1 cut(s) 265
BseDI CCNNGG 1 cut(s) 120
BseLI CCNNNNNNNGG 2 cut(s) 260, 288
BseMII CTCAG 1 cut(s) 197
BseNI ACTGG 1 cut(s) 265
BseXI GCAGC 1 cut(s) 226
BshFI GGCC 1 cut(s) 281
BslFI GGGAC 1 cut(s) 189
BslI CCNNNNNNNGG 2 cut(s) 260, 288
BsmAI GTCTC 1 cut(s) 216
BsmFI GGGAC 1 cut(s) 189
BsmI GAATGC 1 cut(s) 269
BsnI GGCC 1 cut(s) 281
Bsp119I TTCGAA 1 cut(s) 84
Bsp143I GATC 1 cut(s) 205
BspANI GGCC 1 cut(s) 281
BspCNI CTCAG 1 cut(s) 196
BspLI GGNNCC 2 cut(s) 177, 207
BspPI GGATC 2 cut(s) 200, 213
BspT104I TTCGAA 1 cut(s) 84
BsrI ACTGG 1 cut(s) 265
BssECI CCNNGG 1 cut(s) 120
BssMI GATC 1 cut(s) 205
BssT1I CCWWGG 1 cut(s) 120
Bst4CI ACNGT 1 cut(s) 327
BstBI TTCGAA 1 cut(s) 84
BstDEI CTNAG 2 cut(s) 183, 255
BstENI CCTNNNNNAGG 1 cut(s) 286
BstKTI GATC 1 cut(s) 208
BstMAI GTCTC 1 cut(s) 216
BstMBI GATC 1 cut(s) 205
BstNSI RCATGY 1 cut(s) 229
BstV1I GCAGC 1 cut(s) 226
BstX2I RGATCY 1 cut(s) 205
BstXI CCANNNNNNTGG 1 cut(s) 127
BstYI RGATCY 1 cut(s) 205
BsuRI GGCC 1 cut(s) 281
Cfr13I GGNCC 1 cut(s) 176
Csp6I GTAC 1 cut(s) 323
CviAII CATG 1 cut(s) 226
CviJI RGCY 7 cut(s) 53, 131, 153, 187, 239, 281, 297
CviKI_1 RGCY 7 cut(s) 53, 131, 153, 187, 239, 281, 297
CviQI GTAC 1 cut(s) 323
DdeI CTNAG 2 cut(s) 183, 255
DpnI GATC 1 cut(s) 207
DpnII GATC 1 cut(s) 205
Eco130I CCWWGG 1 cut(s) 120
Eco47I GGWCC 1 cut(s) 176
EcoNI CCTNNNNNAGG 1 cut(s) 286
EcoT14I CCWWGG 1 cut(s) 120
ErhI CCWWGG 1 cut(s) 120
FaeI CATG 1 cut(s) 229
FaiI YATR 3 cut(s) 23, 150, 227
FaqI GGGAC 1 cut(s) 189
FatI CATG 1 cut(s) 225
Fnu4HI GCNGC 1 cut(s) 240
Fsp4HI GCNGC 1 cut(s) 240
GluI GCNGC 1 cut(s) 240
HaeIII GGCC 1 cut(s) 281
Hin1II CATG 1 cut(s) 229
Hpy188I TCNGA 2 cut(s) 79, 221
Hpy188III TCNNGA 1 cut(s) 285
HpyAV CCTTC 1 cut(s) 282
HpyCH4III ACNGT 1 cut(s) 327
HpyCH4V TGCA 2 cut(s) 139, 242
HpyF3I CTNAG 2 cut(s) 183, 255
Hsp92II CATG 1 cut(s) 229
Kzo9I GATC 1 cut(s) 205
LpnPI CCDG 2 cut(s) 246, 270
Lsp1109I GCAGC 1 cut(s) 226
MalI GATC 1 cut(s) 207
MboI GATC 1 cut(s) 205
MflI RGATCY 1 cut(s) 205
MluCI AATT 2 cut(s) 247, 306
MmeI TCCRAC 1 cut(s) 233
MnlI CCTC 6 cut(s) 53, 73, 79, 103, 258, 292
Mva1269I GAATGC 1 cut(s) 269
NdeII GATC 1 cut(s) 205
NlaIII CATG 1 cut(s) 229
NlaIV GGNNCC 2 cut(s) 177, 207
NspI RCATGY 1 cut(s) 229
NspV TTCGAA 1 cut(s) 84
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PctI GAATGC 1 cut(s) 269
PkrI GCNGC 1 cut(s) 241
PspN4I GGNNCC 2 cut(s) 177, 207
PspPI GGNCC 1 cut(s) 176
PsuI RGATCY 1 cut(s) 205
RsaI GTAC 1 cut(s) 324
RsaNI GTAC 1 cut(s) 323
SatI GCNGC 1 cut(s) 240
Sau3AI GATC 1 cut(s) 205
Sau96I GGNCC 1 cut(s) 176
SetI ASST 8 cut(s) 45, 65, 71, 95, 101, 126, 189, 293
SfuI TTCGAA 1 cut(s) 84
SgeI CNNG 9 cut(s) 56, 76, 133, 154, 238, 273, 297, 306, 324
SinI GGWCC 1 cut(s) 176
Sse9I AATT 2 cut(s) 247, 306
StyI CCWWGG 1 cut(s) 120
TaaI ACNGT 1 cut(s) 327
TaqI TCGA 3 cut(s) 45, 65, 84
TasI AATT 2 cut(s) 247, 306
TatI WGTACW 1 cut(s) 322
TseI GCWGC 1 cut(s) 239
TspDTI ATGAA 2 cut(s) 17, 63
VpaK11BI GGWCC 1 cut(s) 176
XagI CCTNNNNNAGG 1 cut(s) 286
XapI RAATTY 1 cut(s) 306
XceI RCATGY 1 cut(s) 229
XcmI CCANNNNNNNNNTGG 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.