Rmu_sc0004646.1_g000039

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004646.1
Physical Location & Seq
Forward (+)
135778 .. 141343
5566 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004646.1_g000039.1.cds

Sequence Viewer

Length: 1623 bp
atggtcgcaaacgacaagtcgttcaaaaaagtccatatcgcaaaaagccgttgtcttcagagcagagtcttattcagcgtcactgcagcaataaacaaagaatctccgaactgttattattgggatatgaaaccctccacctcctcttcttcgtcttcttcttcttcttcttcgccatgcggatcaaacacgctcttaacgattctgttccagtcgagatccgaagcctgcagcaacgattctattctcagagacttggccgccagagaattcaacgccttcctctggatctctctcatcgccgtcaccgctctgttgctcaggaagctcttcgacctgcttcgcttatgggccaaagccaaggccatccctgggcctccttgcccctctttctacggccactccaacctcctttcccgccaaaatattactgaggtgttgggtgatttgcacaagaaatatggatctgttgtgaagttgtggttgggaccgactcggcttttagtgtcaataaaggatccaattcttatcaaagagatgctactaaaggctgcagataagttacctatgactgggagggcattccatttggcctttggaaggtcgagtctctttgcttcttctttcgacgaggtgcaaaagagaagggaaacattattaacagaattaaatggaaaagttcgtgagaacaaaaatgtgttccccaccaaggctgtggactgtgtcttggagaggataaacaatgtaatgggtaaagatagtgttgacagtagagtattttctcaacacatggcttttaccatgttaggagccaccctctttggagatgcatttttagcttggtctaaggcagctgtttacgaggagctccttatgatgattgctaaggatgctggtttttgggcttcttattgtgttactcccttttggaagcctggattttggaaatatcagtctgtatgcacaaagttgaaatgcttaacgcaagatattgttcaacaatgctgcaacctatactcttgggaaactggaaacttaggaaaggaggttgcatctggtggaccatcttgctctgaagttaggatagtagacaatctattctatgaggagcttaatggccattttaatgttagtgaggaaccatatgggaatcttatgggcataatgtttcacggatgcctcagcacagctagtttgattaataacattatgatgaaccttgctacgcatccacaaatacaggataagatctactcggaggtaactatggcacaaaaagatgcaatgaaggaagaccagattagggctgctcagaagtttgtgaatctgggagagagctccttcactttgaatgatccaaataaaagtacagcgtttcttccctttggctctggtatacgtgcctgcgttgggcagaaatttgtaactgaaggagttgcaatgttgttcgcgtcattgctcaaacagtatgagataaagctccatccagaagctcaggatacctcaaaaccaaataactttggaatagccctggtttctggttttataagcactcctgggctattggtgaagcggagccgtctggttttcttccccatcctgcaatgttatcttctatggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

540

Amino Acids

60.2

Weight (kDa)

8.99

Isoelectric Point (pI)

43.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1547
Acc36I ACCTGC 1 cut(s) 345
AccBSI CCGCTC 1 cut(s) 311
AccI GTMKAC 2 cut(s) 1089, 1396
AccII CGCG 1 cut(s) 1451
AciI CCGC 5 cut(s) 180, 261, 309, 418, 1573
AclWI GGATC 7 cut(s) 190, 213, 296, 472, 512, 525, 1349
AcoI YGGCCR 3 cut(s) 258, 397, 1117
AcsI RAATTY 2 cut(s) 269, 1418
AcuI CTGAAG 3 cut(s) 41, 1095, 1449
AfaI GTAC 1 cut(s) 1369
AfiI CCNNNNNNNGG 7 cut(s) 285, 372, 572, 600, 709, 1303, 1410
AgsI TTSAA 5 cut(s) 25, 274, 973, 998, 1351
AjnI CCWGG 4 cut(s) 370, 934, 1530, 1555
AjuI GAANNNNNNNTTGG 2 cut(s) 467, 499
AluBI AGCT 9 cut(s) 328, 839, 854, 868, 1111, 1190, 1338, 1480, 1493
AluI AGCT 9 cut(s) 328, 839, 854, 868, 1111, 1190, 1338, 1480, 1493
Alw21I GWGCWC 2 cut(s) 870, 1340
Alw26I GTCTC 2 cut(s) 246, 614
AlwI GGATC 7 cut(s) 190, 213, 296, 472, 512, 525, 1349
AoxI GGCC 7 cut(s) 258, 351, 363, 374, 397, 591, 1117
ApeKI GCWGC 6 cut(s) 86, 231, 551, 851, 1005, 1307
ApoI RAATTY 2 cut(s) 269, 1418
ArsI GACNNNNNNTTYG 1 cut(s) 34
AseI ATTAAT 1 cut(s) 1200
Asp700I GAANNNNTTC 1 cut(s) 329
AspS9I GGNCC 4 cut(s) 351, 374, 488, 1061
AsuHPI GGTGA 3 cut(s) 298, 455, 1579
AvaII GGWCC 2 cut(s) 488, 1061
BalI TGGCCA 1 cut(s) 1119
BamHI GGATCC 1 cut(s) 517
BanII GRGCYC 2 cut(s) 870, 1340
BbsI GAAGAC 3 cut(s) 47, 147, 1299
Bbv12I GWGCWC 2 cut(s) 870, 1340
BbvCI CCTCAGC 1 cut(s) 1181
BbvI GCAGC 6 cut(s) 98, 243, 538, 863, 992, 1294
BccI CCATC 4 cut(s) 374, 1072, 1491, 1604
BceAI ACGGC 4 cut(s) 33, 287, 412, 1563
BciT130I CCWGG 4 cut(s) 372, 936, 1532, 1557
BciVI GTATCC 1 cut(s) 1492
BcoDI GTCTC 2 cut(s) 246, 614
BfaI CTAG 1 cut(s) 1191
BfmI CTRYAG 3 cut(s) 84, 229, 552
BfuAI ACCTGC 1 cut(s) 345
BfuI GTATCC 1 cut(s) 1492
BglII AGATCT 1 cut(s) 1248
BisI GCNGC 7 cut(s) 87, 232, 261, 552, 852, 1006, 1308
BlsI GCNGC 7 cut(s) 88, 233, 262, 553, 853, 1007, 1309
Bme1390I CCNGG 4 cut(s) 372, 936, 1532, 1557
Bme18I GGWCC 2 cut(s) 488, 1061
BmgT120I GGNCC 4 cut(s) 351, 374, 488, 1061
BmiI GGNNCC 5 cut(s) 489, 519, 811, 1140, 1577
BmrFI CCNGG 4 cut(s) 372, 936, 1532, 1557
BmrI ACTGGG 1 cut(s) 582
BmsI GCATC 7 cut(s) 528, 817, 880, 1061, 1166, 1237, 1270
BmuI ACTGGG 1 cut(s) 582
BpiI GAAGAC 3 cut(s) 47, 147, 1299
BplI GAGNNNNNCTC 2 cut(s) 801, 833
Bpu10I CCTNAGC 4 cut(s) 320, 885, 1181, 1494
BsaAI YACGTR 1 cut(s) 1400
BsaJI CCNNGG 6 cut(s) 360, 370, 371, 708, 1530, 1556
BsaXI ACNNNNNCTCC 2 cut(s) 386, 416
Bsc4I CCNNNNNNNGG 7 cut(s) 285, 372, 572, 600, 709, 1303, 1410
Bse1I ACTGG 3 cut(s) 211, 577, 1033
Bse3DI GCAATG 4 cut(s) 1290, 1446, 1454, 1610
BseBI CCWGG 4 cut(s) 372, 936, 1532, 1557
BseDI CCNNGG 6 cut(s) 360, 370, 371, 708, 1530, 1556
BseGI GGATG 6 cut(s) 366, 895, 1181, 1228, 1483, 1596
BseLI CCNNNNNNNGG 7 cut(s) 285, 372, 572, 600, 709, 1303, 1410
BseMI GCAATG 4 cut(s) 1290, 1446, 1454, 1610
BseMII CTCAG 6 cut(s) 262, 334, 423, 1195, 1325, 1508
BseNI ACTGG 3 cut(s) 211, 577, 1033
BseRI GAGGAG 3 cut(s) 133, 878, 1121
BseXI GCAGC 6 cut(s) 98, 243, 538, 863, 992, 1294
Bsh1236I CGCG 1 cut(s) 1451
BshFI GGCC 7 cut(s) 260, 353, 365, 376, 399, 593, 1119
BsiHKAI GWGCWC 2 cut(s) 870, 1340
BslFI GGGAC 1 cut(s) 501
BslI CCNNNNNNNGG 7 cut(s) 285, 372, 572, 600, 709, 1303, 1410
BsmAI GTCTC 2 cut(s) 246, 614
BsmFI GGGAC 1 cut(s) 501
BsmI GAATGC 1 cut(s) 581
BsnI GGCC 7 cut(s) 260, 353, 365, 376, 399, 593, 1119
Bsp1286I GDGCHC 2 cut(s) 870, 1340
Bsp143I GATC 7 cut(s) 182, 218, 288, 464, 517, 1248, 1354
BspACI CCGC 5 cut(s) 180, 261, 309, 418, 1573
BspANI GGCC 7 cut(s) 260, 353, 365, 376, 399, 593, 1119
BspCNI CTCAG 6 cut(s) 261, 333, 424, 1194, 1324, 1507
BspFNI CGCG 1 cut(s) 1451
BspLI GGNNCC 5 cut(s) 489, 519, 811, 1140, 1577
BspMAI CTGCAG 3 cut(s) 88, 233, 556
BspMI ACCTGC 1 cut(s) 345
BspPI GGATC 7 cut(s) 190, 213, 296, 472, 512, 525, 1349
BspQI GCTCTTC 1 cut(s) 335
BsrBI CCGCTC 1 cut(s) 311
BsrDI GCAATG 4 cut(s) 1290, 1446, 1454, 1610
BsrI ACTGG 3 cut(s) 211, 577, 1033
BssECI CCNNGG 6 cut(s) 360, 370, 371, 708, 1530, 1556
BssMI GATC 7 cut(s) 182, 218, 288, 464, 517, 1248, 1354
BssNAI GTATAC 1 cut(s) 1397
BssT1I CCWWGG 2 cut(s) 360, 708
Bst1107I GTATAC 1 cut(s) 1397
Bst2UI CCWGG 4 cut(s) 372, 936, 1532, 1557
Bst4CI ACNGT 4 cut(s) 113, 722, 770, 1467
Bst6I CTCTTC 2 cut(s) 151, 335
BstBAI YACGTR 1 cut(s) 1400
BstC8I GCNNGC 2 cut(s) 229, 1405
BstDEI CTNAG 9 cut(s) 248, 320, 432, 846, 885, 1036, 1181, 1311, 1494
BstENI CCTNNNNNAGG 1 cut(s) 598
BstF5I GGATG 6 cut(s) 366, 895, 1181, 1228, 1483, 1596
BstFNI CGCG 1 cut(s) 1451
BstKTI GATC 7 cut(s) 185, 221, 291, 467, 520, 1251, 1357
BstMAI GTCTC 2 cut(s) 246, 614
BstMBI GATC 7 cut(s) 182, 218, 288, 464, 517, 1248, 1354
BstMWI GCNNNNNNNGC 4 cut(s) 308, 325, 836, 890
BstNI CCWGG 4 cut(s) 372, 936, 1532, 1557
BstSCI CCNGG 4 cut(s) 370, 934, 1530, 1555
BstSFI CTRYAG 3 cut(s) 84, 229, 552
BstUI CGCG 1 cut(s) 1451
BstV1I GCAGC 6 cut(s) 98, 243, 538, 863, 992, 1294
BstV2I GAAGAC 3 cut(s) 47, 147, 1299
BstX2I RGATCY 5 cut(s) 218, 288, 464, 517, 1248
BstXI CCANNNNNNTGG 1 cut(s) 715
BstYI RGATCY 5 cut(s) 218, 288, 464, 517, 1248
BstZ17I GTATAC 1 cut(s) 1397
BsuI GTATCC 1 cut(s) 1492
BsuRI GGCC 7 cut(s) 260, 353, 365, 376, 399, 593, 1119
BtgZI GCGATG 1 cut(s) 283
BtsCI GGATG 6 cut(s) 366, 895, 1181, 1228, 1483, 1596
BtsI GCAGTG 1 cut(s) 81
BtsIMutI CAGTG 1 cut(s) 81
BveI ACCTGC 1 cut(s) 345
Cac8I GCNNGC 2 cut(s) 229, 1405
Cfr13I GGNCC 4 cut(s) 351, 374, 488, 1061
CseI GACGC 2 cut(s) 67, 1440
Csp6I GTAC 1 cut(s) 1368
CspCI CAANNNNNGTGG 2 cut(s) 802, 837
CviAII CATG 3 cut(s) 177, 790, 802
CviQI GTAC 1 cut(s) 1368
DdeI CTNAG 9 cut(s) 248, 320, 432, 846, 885, 1036, 1181, 1311, 1494
DpnI GATC 7 cut(s) 184, 220, 290, 466, 519, 1250, 1356
DpnII GATC 7 cut(s) 182, 218, 288, 464, 517, 1248, 1354
EaeI YGGCCR 3 cut(s) 258, 397, 1117
Eam1104I CTCTTC 2 cut(s) 151, 335
EarI CTCTTC 2 cut(s) 151, 335
Ecl136II GAGCTC 2 cut(s) 868, 1338
Eco130I CCWWGG 2 cut(s) 360, 708
Eco24I GRGCYC 2 cut(s) 870, 1340
Eco47I GGWCC 2 cut(s) 488, 1061
Eco53kI GAGCTC 2 cut(s) 868, 1338
Eco57I CTGAAG 3 cut(s) 41, 1095, 1449
EcoICRI GAGCTC 2 cut(s) 868, 1338
EcoNI CCTNNNNNAGG 1 cut(s) 598
EcoRI GAATTC 1 cut(s) 269
EcoRII CCWGG 4 cut(s) 370, 934, 1530, 1555
EcoT14I CCWWGG 2 cut(s) 360, 708
EcoT22I ATGCAT 1 cut(s) 832
EcoT38I GRGCYC 2 cut(s) 870, 1340
ErhI CCWWGG 2 cut(s) 360, 708
FaeI CATG 3 cut(s) 180, 793, 805
FaqI GGGAC 1 cut(s) 501
FatI CATG 3 cut(s) 176, 789, 801
FauI CCCGC 1 cut(s) 425
FauNDI CATATG 1 cut(s) 1144
FblI GTMKAC 2 cut(s) 1089, 1396
Fnu4HI GCNGC 7 cut(s) 87, 232, 261, 552, 852, 1006, 1308
FokI GGATG 6 cut(s) 353, 902, 1188, 1215, 1470, 1583
FriOI GRGCYC 2 cut(s) 870, 1340
Fsp4HI GCNGC 7 cut(s) 87, 232, 261, 552, 852, 1006, 1308
FspBI CTAG 1 cut(s) 1191
GluI GCNGC 7 cut(s) 87, 232, 261, 552, 852, 1006, 1308
HaeIII GGCC 7 cut(s) 260, 353, 365, 376, 399, 593, 1119
HgaI GACGC 2 cut(s) 67, 1440
Hin1II CATG 3 cut(s) 180, 793, 805
HincII GTYRAC 1 cut(s) 766
HindII GTYRAC 1 cut(s) 766
HinfI GANTC 8 cut(s) 66, 101, 202, 239, 493, 607, 1150, 1324
HphI GGTGA 3 cut(s) 298, 455, 1579
Hpy166II GTNNAC 6 cut(s) 718, 766, 859, 1061, 1090, 1397
Hpy188I TCNGA 7 cut(s) 60, 108, 223, 251, 1075, 1258, 1314
Hpy188III TCNNGA 6 cut(s) 216, 286, 322, 683, 1487, 1496
Hpy8I GTNNAC 6 cut(s) 718, 766, 859, 1061, 1090, 1397
Hpy99I CGWCG 1 cut(s) 632
HpyAV CCTTC 6 cut(s) 289, 594, 639, 1282, 1351, 1424
HpyCH4III ACNGT 4 cut(s) 113, 722, 770, 1467
HpyCH4IV ACGT 1 cut(s) 1399
HpyF10VI GCNNNNNNNGC 4 cut(s) 308, 325, 836, 890
HpyF3I CTNAG 9 cut(s) 248, 320, 432, 846, 885, 1036, 1181, 1311, 1494
HpySE526I ACGT 1 cut(s) 1399
Hsp92II CATG 3 cut(s) 180, 793, 805
Kzo9I GATC 7 cut(s) 182, 218, 288, 464, 517, 1248, 1354
LguI GCTCTTC 1 cut(s) 335
LmnI GCTCC 7 cut(s) 809, 865, 873, 1108, 1343, 1485, 1575
Lsp1109I GCAGC 6 cut(s) 98, 243, 538, 863, 992, 1294
LweI GCATC 7 cut(s) 528, 817, 880, 1061, 1166, 1237, 1270
MaeI CTAG 1 cut(s) 1191
MaeII ACGT 1 cut(s) 1399
MaeIII GTNAC 6 cut(s) 79, 304, 561, 916, 1261, 1423
MalI GATC 7 cut(s) 184, 220, 290, 466, 519, 1250, 1356
MbiI CCGCTC 1 cut(s) 311
MboI GATC 7 cut(s) 182, 218, 288, 464, 517, 1248, 1354
MflI RGATCY 5 cut(s) 218, 288, 464, 517, 1248
MhlI GDGCHC 2 cut(s) 870, 1340
MlsI TGGCCA 1 cut(s) 1119
MluCI AATT 4 cut(s) 269, 522, 665, 1418
MluNI TGGCCA 1 cut(s) 1119
MlyI GAGTC 3 cut(s) 75, 487, 616
MmeI TCCRAC 1 cut(s) 429
Mox20I TGGCCA 1 cut(s) 1119
Mph1103I ATGCAT 1 cut(s) 832
MroXI GAANNNNTTC 1 cut(s) 329
MscI TGGCCA 1 cut(s) 1119
MseI TTAA 7 cut(s) 197, 659, 668, 980, 1113, 1125, 1200
MslI CAYNNNNRTG 2 cut(s) 1125, 1211
Msp20I TGGCCA 1 cut(s) 1119
MspA1I CMGCKG 1 cut(s) 854
MspR9I CCNGG 4 cut(s) 372, 936, 1532, 1557
Mva1269I GAATGC 1 cut(s) 581
MvaI CCWGG 4 cut(s) 372, 936, 1532, 1557
MvnI CGCG 1 cut(s) 1451
MwoI GCNNNNNNNGC 4 cut(s) 308, 325, 836, 890
NdeI CATATG 1 cut(s) 1144
NdeII GATC 7 cut(s) 182, 218, 288, 464, 517, 1248, 1354
NlaIII CATG 3 cut(s) 180, 793, 805
NlaIV GGNNCC 5 cut(s) 489, 519, 811, 1140, 1577
NmeAIII GCCGAG 1 cut(s) 475
NmuCI GTSAC 2 cut(s) 79, 304
NsiI ATGCAT 1 cut(s) 832
PasI CCCWGGG 1 cut(s) 371
PciSI GCTCTTC 1 cut(s) 335
PcsI WCGNNNNNNNCGW 1 cut(s) 197
PctI GAATGC 1 cut(s) 581
PdmI GAANNNNTTC 1 cut(s) 329
PfeI GAWTC 5 cut(s) 101, 202, 239, 1150, 1324
PflFI GACNNNGTC 1 cut(s) 722
PkrI GCNGC 7 cut(s) 88, 233, 262, 553, 853, 1007, 1309
PleI GAGTC 3 cut(s) 74, 487, 615
PpsI GAGTC 3 cut(s) 74, 487, 615
Ppu21I YACGTR 1 cut(s) 1400
PshBI ATTAAT 1 cut(s) 1200
PsiI TTATAA 1 cut(s) 1547
Psp124BI GAGCTC 2 cut(s) 870, 1340
Psp6I CCWGG 4 cut(s) 370, 934, 1530, 1555
PspGI CCWGG 4 cut(s) 370, 934, 1530, 1555
PspN4I GGNNCC 5 cut(s) 489, 519, 811, 1140, 1577
PspPI GGNCC 4 cut(s) 351, 374, 488, 1061
PstI CTGCAG 3 cut(s) 88, 233, 556
PsuI RGATCY 5 cut(s) 218, 288, 464, 517, 1248
PsyI GACNNNGTC 1 cut(s) 722
PvuII CAGCTG 1 cut(s) 854
RsaI GTAC 1 cut(s) 1369
RsaNI GTAC 1 cut(s) 1368
RseI CAYNNNNRTG 2 cut(s) 1125, 1211
SacI GAGCTC 2 cut(s) 870, 1340
SapI GCTCTTC 1 cut(s) 335
SaqAI TTAA 7 cut(s) 197, 659, 668, 980, 1113, 1125, 1200
SatI GCNGC 7 cut(s) 87, 232, 261, 552, 852, 1006, 1308
Sau3AI GATC 7 cut(s) 182, 218, 288, 464, 517, 1248, 1354
Sau96I GGNCC 4 cut(s) 351, 374, 488, 1061
SchI GAGTC 3 cut(s) 75, 487, 616
ScrFI CCNGG 4 cut(s) 372, 936, 1532, 1557
SduI GDGCHC 2 cut(s) 870, 1340
SfaNI GCATC 7 cut(s) 528, 817, 880, 1061, 1166, 1237, 1270
SfcI CTRYAG 3 cut(s) 84, 229, 552
SinI GGWCC 2 cut(s) 488, 1061
SmiMI CAYNNNNRTG 2 cut(s) 1125, 1211
Sse9I AATT 4 cut(s) 269, 522, 665, 1418
SsiI CCGC 5 cut(s) 180, 261, 309, 418, 1573
SspI AATATT 1 cut(s) 427
SspMI CTAG 1 cut(s) 1191
SstI GAGCTC 2 cut(s) 870, 1340
StyD4I CCNGG 4 cut(s) 370, 934, 1530, 1555
StyI CCWWGG 2 cut(s) 360, 708
TaaI ACNGT 4 cut(s) 113, 722, 770, 1467
TaiI ACGT 1 cut(s) 1402
TaqI TCGA 4 cut(s) 215, 333, 605, 627
TaqII GACCGA 1 cut(s) 505
TasI AATT 4 cut(s) 269, 522, 665, 1418
TatI WGTACW 1 cut(s) 1367
TauI GCSGC 1 cut(s) 263
TfiI GAWTC 5 cut(s) 101, 202, 239, 1150, 1324
Tru1I TTAA 7 cut(s) 197, 659, 668, 980, 1113, 1125, 1200
Tru9I TTAA 7 cut(s) 197, 659, 668, 980, 1113, 1125, 1200
TscAI CASTG 1 cut(s) 88
TseFI GTSAC 2 cut(s) 79, 304
TseI GCWGC 6 cut(s) 86, 231, 551, 851, 1005, 1307
Tsp45I GTSAC 2 cut(s) 79, 304
TspDTI ATGAA 3 cut(s) 143, 1229, 1301
TspGWI ACGGA 1 cut(s) 1188
TspRI CASTG 1 cut(s) 88
Tth111I GACNNNGTC 1 cut(s) 722
VpaK11BI GGWCC 2 cut(s) 488, 1061
VspI ATTAAT 1 cut(s) 1200
XagI CCTNNNNNAGG 1 cut(s) 598
XapI RAATTY 2 cut(s) 269, 1418
XcmI CCANNNNNNNNNTGG 2 cut(s) 593, 712
XmiI GTMKAC 2 cut(s) 1089, 1396
XmnI GAANNNNTTC 1 cut(s) 329
XspI CTAG 1 cut(s) 1191
Zsp2I ATGCAT 1 cut(s) 832
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.