Rh5DG413900

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
65826342 .. 65827091
750 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG413900.1

Sequence Viewer

Length: 357 bp
ATGTCCCTGGAAAGAGCAATACAAACTGAGGTGTTGGCTGATTTGCACAAGAAATATGGCTCTGTTGTGAAGTTGTGGTTGGGACCAACTCAGCTTTTAGTGTCAATAAAGGATCCAACTCTTATCAGAGACATGCTACTAAAGGCTGCAAATAATTTGCCTATGACTGGGAGGGCATTCCATTTGACCTCTGGAAGGTCAAGCCTTTGGAGGTATCAACTCCTTGTTTCACTTCTTGTGCTACTTGGGTATTTCTATTACTTTGCATCATTCTTAGGTTATTGTCCTTTTAAGTTTTTTTATGTTGTAATGATCAGTGTATTCCCCATCTGTCTTTCAGAATTTCAAGGGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

118

Amino Acids

13.54

Weight (kDa)

9.39

Isoelectric Point (pI)

34.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 107, 120
AcsI RAATTY 1 cut(s) 341
AfiI CCNNNNNNNGG 2 cut(s) 167, 195
AgsI TTSAA 1 cut(s) 347
AjnI CCWGG 1 cut(s) 6
AjuI GAANNNNNNNTTGG 2 cut(s) 62, 94
AluBI AGCT 1 cut(s) 94
AluI AGCT 1 cut(s) 94
Alw26I GTCTC 1 cut(s) 123
AlwI GGATC 2 cut(s) 107, 120
ApeKI GCWGC 1 cut(s) 146
ApoI RAATTY 1 cut(s) 341
AspS9I GGNCC 1 cut(s) 83
AvaII GGWCC 1 cut(s) 83
BamHI GGATCC 1 cut(s) 112
BbvI GCAGC 1 cut(s) 133
BccI CCATC 1 cut(s) 335
BciT130I CCWGG 1 cut(s) 8
BclI TGATCA 1 cut(s) 312
BcoDI GTCTC 1 cut(s) 123
BisI GCNGC 1 cut(s) 147
BlsI GCNGC 1 cut(s) 148
Bme1390I CCNGG 1 cut(s) 8
Bme18I GGWCC 1 cut(s) 83
BmgT120I GGNCC 1 cut(s) 83
BmiI GGNNCC 2 cut(s) 84, 114
BmrFI CCNGG 1 cut(s) 8
BmrI ACTGGG 1 cut(s) 177
BmsI GCATC 1 cut(s) 275
BmuI ACTGGG 1 cut(s) 177
BsaJI CCNNGG 1 cut(s) 6
Bsc4I CCNNNNNNNGG 2 cut(s) 167, 195
Bse1I ACTGG 1 cut(s) 172
BseBI CCWGG 1 cut(s) 8
BseDI CCNNGG 1 cut(s) 6
BseLI CCNNNNNNNGG 2 cut(s) 167, 195
BseMII CTCAG 2 cut(s) 18, 104
BseNI ACTGG 1 cut(s) 172
BseXI GCAGC 1 cut(s) 133
BslFI GGGAC 1 cut(s) 96
BslI CCNNNNNNNGG 2 cut(s) 167, 195
BsmAI GTCTC 1 cut(s) 123
BsmFI GGGAC 1 cut(s) 96
BsmI GAATGC 1 cut(s) 176
Bsp143I GATC 2 cut(s) 112, 312
BspCNI CTCAG 2 cut(s) 19, 103
BspLI GGNNCC 2 cut(s) 84, 114
BspPI GGATC 2 cut(s) 107, 120
BsrI ACTGG 1 cut(s) 172
BssECI CCNNGG 1 cut(s) 6
BssMI GATC 2 cut(s) 112, 312
Bst2UI CCWGG 1 cut(s) 8
BstDEI CTNAG 3 cut(s) 27, 90, 274
BstENI CCTNNNNNAGG 1 cut(s) 193
BstKTI GATC 2 cut(s) 115, 315
BstMAI GTCTC 1 cut(s) 123
BstMBI GATC 2 cut(s) 112, 312
BstNI CCWGG 1 cut(s) 8
BstNSI RCATGY 1 cut(s) 136
BstSCI CCNGG 1 cut(s) 6
BstV1I GCAGC 1 cut(s) 133
BstX2I RGATCY 1 cut(s) 112
BstYI RGATCY 1 cut(s) 112
BtsIMutI CAGTG 1 cut(s) 322
Cfr13I GGNCC 1 cut(s) 83
CviAII CATG 1 cut(s) 133
CviJI RGCY 5 cut(s) 38, 60, 94, 146, 204
CviKI_1 RGCY 5 cut(s) 38, 60, 94, 146, 204
DdeI CTNAG 3 cut(s) 27, 90, 274
DpnI GATC 2 cut(s) 114, 314
DpnII GATC 2 cut(s) 112, 312
Eco47I GGWCC 1 cut(s) 83
EcoNI CCTNNNNNAGG 1 cut(s) 193
EcoRII CCWGG 1 cut(s) 6
FaeI CATG 1 cut(s) 136
FaiI YATR 4 cut(s) 57, 134, 164, 303
FaqI GGGAC 1 cut(s) 96
FatI CATG 1 cut(s) 132
FbaI TGATCA 1 cut(s) 312
Fnu4HI GCNGC 1 cut(s) 147
Fsp4HI GCNGC 1 cut(s) 147
GluI GCNGC 1 cut(s) 147
Hin1II CATG 1 cut(s) 136
Hpy188I TCNGA 2 cut(s) 128, 340
Hpy188III TCNNGA 1 cut(s) 192
HpyAV CCTTC 1 cut(s) 189
HpyCH4V TGCA 3 cut(s) 46, 149, 266
HpyF3I CTNAG 3 cut(s) 27, 90, 274
Hsp92II CATG 1 cut(s) 136
Ksp22I TGATCA 1 cut(s) 312
Kzo9I GATC 2 cut(s) 112, 312
LpnPI CCDG 3 cut(s) 20, 153, 177
Lsp1109I GCAGC 1 cut(s) 133
LweI GCATC 1 cut(s) 275
MalI GATC 2 cut(s) 114, 314
MboI GATC 2 cut(s) 112, 312
MflI RGATCY 1 cut(s) 112
MluCI AATT 2 cut(s) 154, 341
MmeI TCCRAC 1 cut(s) 140
MnlI CCTC 4 cut(s) 22, 165, 199, 204
MseI TTAA 1 cut(s) 291
MspR9I CCNGG 1 cut(s) 8
Mva1269I GAATGC 1 cut(s) 176
MvaI CCWGG 1 cut(s) 8
NdeII GATC 2 cut(s) 112, 312
NlaIII CATG 1 cut(s) 136
NlaIV GGNNCC 2 cut(s) 84, 114
NspI RCATGY 1 cut(s) 136
PctI GAATGC 1 cut(s) 176
PkrI GCNGC 1 cut(s) 148
Psp6I CCWGG 1 cut(s) 6
PspGI CCWGG 1 cut(s) 6
PspN4I GGNNCC 2 cut(s) 84, 114
PspPI GGNCC 1 cut(s) 83
PsuI RGATCY 1 cut(s) 112
SaqAI TTAA 1 cut(s) 291
SatI GCNGC 1 cut(s) 147
Sau3AI GATC 2 cut(s) 112, 312
Sau96I GGNCC 1 cut(s) 83
ScrFI CCNGG 1 cut(s) 8
SetI ASST 6 cut(s) 33, 96, 191, 200, 215, 280
SfaNI GCATC 1 cut(s) 275
SinI GGWCC 1 cut(s) 83
Sse9I AATT 2 cut(s) 154, 341
StyD4I CCNGG 1 cut(s) 6
TasI AATT 2 cut(s) 154, 341
Tru1I TTAA 1 cut(s) 291
Tru9I TTAA 1 cut(s) 291
TscAI CASTG 1 cut(s) 322
TseI GCWGC 1 cut(s) 146
TspRI CASTG 1 cut(s) 322
VpaK11BI GGWCC 1 cut(s) 83
XagI CCTNNNNNAGG 1 cut(s) 193
XapI RAATTY 1 cut(s) 341
XceI RCATGY 1 cut(s) 136
XcmI CCANNNNNNNNNTGG 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.