Rh6AG099200

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0003955
Physical Location & Seq
Forward (+)
14800368 .. 14805114
4747 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG099200.1

Sequence Viewer

Length: 288 bp
ATGGCTCTGTGGTTGGGACCAACTCAGCTTTTAGTGTCAATAAAGGATCCAACTCTTATCAGAGTCATGCTACTAAAGGCTGCAAATAAGTTGCCTATGATTGGGAGGGCATTCCATTTGGCCTTTGGAAGGTCAAGTCTCTTTGCTTATTCTTTGGATGAGCCGAATCTTGTATACTTGCCAGGAGAGCAGCTTGAAAATGATGAAGTTGGTTCTCTTGCCTGGAGAGTAGCTTTAAGATATCTAAATATGCTTATGAGAAGATTCAATGAGAGCAAAGAAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04726 map04726
Pfam Domains
Protein Families
p450

Protein Analysis

95

Amino Acids

10.85

Weight (kDa)

9.22

Isoelectric Point (pI)

33.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 174
AclWI GGATC 2 cut(s) 41, 54
AfiI CCNNNNNNNGG 2 cut(s) 101, 129
AgsI TTSAA 2 cut(s) 197, 268
AjnI CCWGG 2 cut(s) 181, 221
AluBI AGCT 3 cut(s) 28, 193, 233
AluI AGCT 3 cut(s) 28, 193, 233
Alw26I GTCTC 1 cut(s) 143
AlwI GGATC 2 cut(s) 41, 54
AoxI GGCC 1 cut(s) 120
ApeKI GCWGC 2 cut(s) 80, 190
AspS9I GGNCC 1 cut(s) 17
AvaII GGWCC 1 cut(s) 17
BamHI GGATCC 1 cut(s) 46
BbvI GCAGC 2 cut(s) 67, 202
BciT130I CCWGG 2 cut(s) 183, 223
BcoDI GTCTC 1 cut(s) 143
BisI GCNGC 2 cut(s) 81, 191
BlsI GCNGC 2 cut(s) 82, 192
Bme1390I CCNGG 2 cut(s) 183, 223
Bme18I GGWCC 1 cut(s) 17
BmgT120I GGNCC 1 cut(s) 17
BmiI GGNNCC 2 cut(s) 18, 48
BmrFI CCNGG 2 cut(s) 183, 223
BpmI CTGGAG 1 cut(s) 244
Bsc4I CCNNNNNNNGG 2 cut(s) 101, 129
BseBI CCWGG 2 cut(s) 183, 223
BseGI GGATG 1 cut(s) 163
BseLI CCNNNNNNNGG 2 cut(s) 101, 129
BseMII CTCAG 1 cut(s) 38
BseXI GCAGC 2 cut(s) 67, 202
BshFI GGCC 1 cut(s) 122
BslFI GGGAC 1 cut(s) 30
BslI CCNNNNNNNGG 2 cut(s) 101, 129
BsmAI GTCTC 1 cut(s) 143
BsmFI GGGAC 1 cut(s) 30
BsmI GAATGC 1 cut(s) 110
BsnI GGCC 1 cut(s) 122
Bsp143I GATC 1 cut(s) 46
BspANI GGCC 1 cut(s) 122
BspCNI CTCAG 1 cut(s) 37
BspLI GGNNCC 2 cut(s) 18, 48
BspPI GGATC 2 cut(s) 41, 54
BssMI GATC 1 cut(s) 46
BssNAI GTATAC 1 cut(s) 175
Bst1107I GTATAC 1 cut(s) 175
Bst2UI CCWGG 2 cut(s) 183, 223
BstDEI CTNAG 1 cut(s) 24
BstENI CCTNNNNNAGG 1 cut(s) 127
BstF5I GGATG 1 cut(s) 163
BstKTI GATC 1 cut(s) 49
BstMAI GTCTC 1 cut(s) 143
BstMBI GATC 1 cut(s) 46
BstMWI GCNNNNNNNGC 1 cut(s) 187
BstNI CCWGG 2 cut(s) 183, 223
BstSCI CCNGG 2 cut(s) 181, 221
BstV1I GCAGC 2 cut(s) 67, 202
BstX2I RGATCY 1 cut(s) 46
BstYI RGATCY 1 cut(s) 46
BstZ17I GTATAC 1 cut(s) 175
BsuRI GGCC 1 cut(s) 122
BtsCI GGATG 1 cut(s) 163
Cfr13I GGNCC 1 cut(s) 17
CviAII CATG 1 cut(s) 67
CviJI RGCY 7 cut(s) 5, 28, 80, 122, 163, 193, 233
CviKI_1 RGCY 7 cut(s) 5, 28, 80, 122, 163, 193, 233
DdeI CTNAG 1 cut(s) 24
DpnI GATC 1 cut(s) 48
DpnII GATC 1 cut(s) 46
Eco32I GATATC 1 cut(s) 242
Eco47I GGWCC 1 cut(s) 17
EcoNI CCTNNNNNAGG 1 cut(s) 127
EcoRII CCWGG 2 cut(s) 181, 221
EcoRV GATATC 1 cut(s) 242
FaeI CATG 1 cut(s) 70
FaiI YATR 5 cut(s) 68, 98, 175, 251, 257
FaqI GGGAC 1 cut(s) 30
FatI CATG 1 cut(s) 66
FblI GTMKAC 1 cut(s) 174
Fnu4HI GCNGC 2 cut(s) 81, 191
FokI GGATG 1 cut(s) 170
Fsp4HI GCNGC 2 cut(s) 81, 191
GluI GCNGC 2 cut(s) 81, 191
GsuI CTGGAG 1 cut(s) 244
HaeIII GGCC 1 cut(s) 122
Hin1II CATG 1 cut(s) 70
HinfI GANTC 3 cut(s) 63, 166, 264
Hpy166II GTNNAC 1 cut(s) 175
Hpy188I TCNGA 1 cut(s) 62
Hpy8I GTNNAC 1 cut(s) 175
HpyAV CCTTC 1 cut(s) 123
HpyCH4V TGCA 1 cut(s) 83
HpyF10VI GCNNNNNNNGC 1 cut(s) 187
HpyF3I CTNAG 1 cut(s) 24
Hsp92II CATG 1 cut(s) 70
Kzo9I GATC 1 cut(s) 46
LpnPI CCDG 4 cut(s) 168, 195, 208, 235
Lsp1109I GCAGC 2 cut(s) 67, 202
MalI GATC 1 cut(s) 48
MboI GATC 1 cut(s) 46
MboII GAAGA 1 cut(s) 273
MflI RGATCY 1 cut(s) 46
MlyI GAGTC 1 cut(s) 72
MmeI TCCRAC 1 cut(s) 74
MnlI CCTC 1 cut(s) 99
MseI TTAA 2 cut(s) 236, 286
MspR9I CCNGG 2 cut(s) 183, 223
Mva1269I GAATGC 1 cut(s) 110
MvaI CCWGG 2 cut(s) 183, 223
MwoI GCNNNNNNNGC 1 cut(s) 187
NdeII GATC 1 cut(s) 46
NlaIII CATG 1 cut(s) 70
NlaIV GGNNCC 2 cut(s) 18, 48
PctI GAATGC 1 cut(s) 110
PfeI GAWTC 2 cut(s) 166, 264
PkrI GCNGC 2 cut(s) 82, 192
PleI GAGTC 1 cut(s) 71
PpsI GAGTC 1 cut(s) 71
Psp6I CCWGG 2 cut(s) 181, 221
PspGI CCWGG 2 cut(s) 181, 221
PspN4I GGNNCC 2 cut(s) 18, 48
PspPI GGNCC 1 cut(s) 17
PsuI RGATCY 1 cut(s) 46
SaqAI TTAA 2 cut(s) 236, 286
SatI GCNGC 2 cut(s) 81, 191
Sau3AI GATC 1 cut(s) 46
Sau96I GGNCC 1 cut(s) 17
SchI GAGTC 1 cut(s) 72
ScrFI CCNGG 2 cut(s) 183, 223
SetI ASST 4 cut(s) 30, 134, 195, 235
SinI GGWCC 1 cut(s) 17
StyD4I CCNGG 2 cut(s) 181, 221
TfiI GAWTC 2 cut(s) 166, 264
Tru1I TTAA 2 cut(s) 236, 286
Tru9I TTAA 2 cut(s) 236, 286
TseI GCWGC 2 cut(s) 80, 190
TspDTI ATGAA 1 cut(s) 219
VpaK11BI GGWCC 1 cut(s) 17
XagI CCTNNNNNAGG 1 cut(s) 127
XcmI CCANNNNNNNNNTGG 1 cut(s) 122
XmiI GTMKAC 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.