RchiOBHm_Chr5g0072941

Belongs to the peptidase M16 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0005204
Physical Location & Seq
Reverse (-)
78994026 .. 78999916
5891 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34786

Sequence Viewer

Length: 1419 bp
ATGCAAGCCTGTCTCCCAATTTTAATAGAAAATGACCAAAATGCTCAGTTTGATATAAAATTTACGCGTATGCCACTGACCAAAATCTCTCTGTTTGCTCTCCGCCGTTTTACCCATTCGATCCTAATCCAAGTCAGACCCACCGAATCCCCGACCCGACTCGCCTTTGCAAAATGGACGGAACCGCGGCTGCAGCACGTGTTCTCGTTTCTGCAGTCAGACGGCGATCGGAACTCGATCTCGCTGGTGTGCAAGTCGTGGTACGAGATCGAGCGGTGGTGCAGGAGGAGGATATTCGTCGGGAACTGCTACGCTGCGTGCCCTAGGATTTTGATCAGTCGGTTCCCAGACGTTAGATTCATCACGCTCAAAGGGAAGCCGCACTTCGCCTGCTTCAATCTGGTGTCGGAGGGCTGGGGTGGCTACGTGTATCCCTGGATCGCCGCCATGGCCGGTGCTTATCCTTGGCTCGAGGAGATCAGGCTCAAGAGGATGGTCGTCACCGACGAGAGCTTGGAGCTGATTGCCAACCAAAGAGGAGAGATTCGATTGTGCCGCTTGCGGCCAAGATTGTTGCGCCTGGATGTTGAGAAAGTGGAGGCAGAGGACTATGAGCAATTGGCTAAGGAGCTTGAGAGTGCTTCTCTTCTTGAGATCATGACAAGGTGCTTGAGAAATTCGGCAACGACATTGCTATTGCCTTCAGGATATAGATCAAAGAATAGGACTTGGATTTGTAGAACCTTTGATGTTCTGTATTTTCAAATTGAGTGGGCAGTGGGGATTGAGTCCACCAGATTGAGAGCATTGATAGATCTCTTTTGTGAAATTGTAAACGAACCACTTTACAATCAGCTAAGGACGAAGGAGCAGCTGGGATATGTTGTTCAATGTAACTGGAATGTAACACTCGGTGTTTTTGACTTTTATTTTAAAGTTCAGTCGTCTGATTATAATCCAATCTACTTACAAAGAAGAGTTGACAACTTTATCAATGGTGTGGAAGAGCTTTTGCTAGGATTGGATGATGAATCCTTTGAGAATTACCAAGGTGGGTTAATAGCGAAGCTATTGGAGAAAGATTCAACCCTTATGGATGAAACTGCTCGATATTGGGATCATATTATCTGCAAAAGGTATAAGTTTGACAAATGGGAAAAGATAGCAGAAGAACTCAGATGTCTACAGAAGGGGGATGTTATCAACTTTTACAAGACTTACTTGCAACTATCATCTCCCAAGCGTCGGAGACTTGTAACTCGTGTTTGGGGTTGCAACACTGACATGAAAGAAGCTGAAGAAGTGCGAACGGAGTCTGAGCAAATCATTGAAGACCTTGCAGCCTTTAAGAGGTCATCTCAGTTCTATGGTCATGGAAGTTGTCAGACAGTTGCTCCTCCTATTATGTGTAAGCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005102 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005777 GO:0005782 GO:0005829 GO:0006508 GO:0006518 GO:0006605 GO:0006625 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007275 GO:0007568 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0008286 GO:0008340 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009893 GO:0009894 GO:0009896 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010259 GO:0010604 GO:0010815 GO:0010992 GO:0015031 GO:0015833 GO:0016043 GO:0016787 GO:0017046 GO:0017076 GO:0017144 GO:0019222 GO:0019538 GO:0019725 GO:0022607 GO:0023052 GO:0030163 GO:0030554 GO:0031334 GO:0031907 GO:0031974 GO:0032459 GO:0032461 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0034641 GO:0035639 GO:0036094 GO:0042176 GO:0042221 GO:0042277 GO:0042562 GO:0042579 GO:0042592 GO:0042737 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043434 GO:0043559 GO:0043574 GO:0043603 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045732 GO:0046872 GO:0046907 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0050435 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051259 GO:0051260 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0070011 GO:0070013 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0097159 GO:0097242 GO:0097367 GO:0140030 GO:0140035 GO:0140036 GO:0140096 GO:1901142 GO:1901143 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_M16 Peptidase_M16_C Peptidase_M16_M

Protein Analysis

472

Amino Acids

55.43

Weight (kDa)

8.37

Isoelectric Point (pI)

56.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box_5 PF18511 64 - 96 3.2e-14 F-box
Transp_inhibit PF18791 116 - 162 9.4e-23 Transport inhibitor response 1 protein domain
Peptidase_M16_C PF05193 266 - 350 5.1e-08 Peptidase M16 inactive domain
PqqF-like_C_4 PF22456 273 - 372 1.8e-23 PQQ synthase PqqF-like, C-terminal lobe domain 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 954
AccBSI CCGCTC 1 cut(s) 274
AccI GTMKAC 1 cut(s) 1183
AccII CGCG 2 cut(s) 67, 187
AciI CCGC 8 cut(s) 103, 185, 187, 274, 380, 444, 556, 562
AclWI GGATC 3 cut(s) 115, 446, 1125
AcoI YGGCCR 2 cut(s) 450, 563
AcsI RAATTY 2 cut(s) 59, 676
AcuI CTGAAG 2 cut(s) 687, 1317
AcvI CACGTG 1 cut(s) 199
AdeI CACNNNGTG 1 cut(s) 914
AfaI GTAC 1 cut(s) 263
AfiI CCNNNNNNNGG 2 cut(s) 1245, 1350
AflIII ACRYGT 3 cut(s) 65, 198, 426
AgsI TTSAA 5 cut(s) 397, 764, 890, 1086, 1331
AjnI CCWGG 2 cut(s) 434, 579
AloI GAACNNNNNNTCC 2 cut(s) 870, 902
AluBI AGCT 9 cut(s) 513, 520, 631, 856, 874, 1009, 1069, 1295, 1414
AluI AGCT 9 cut(s) 513, 520, 631, 856, 874, 1009, 1069, 1295, 1414
Alw26I GTCTC 2 cut(s) 17, 1243
AlwI GGATC 3 cut(s) 115, 446, 1125
Ama87I CYCGRG 1 cut(s) 470
AoxI GGCC 2 cut(s) 450, 563
ApeKI GCWGC 5 cut(s) 190, 193, 314, 871, 1340
ApoI RAATTY 2 cut(s) 59, 676
AspA2I CCTAGG 1 cut(s) 323
AspLEI GCGC 1 cut(s) 579
AsuHPI GGTGA 1 cut(s) 493
AvaI CYCGRG 1 cut(s) 470
AvrII CCTAGG 1 cut(s) 323
BaeGI GKGCMC 1 cut(s) 323
BauI CACGAG 1 cut(s) 1260
BbrPI CACGTG 1 cut(s) 199
BbsI GAAGAC 1 cut(s) 1338
BbvI GCAGC 5 cut(s) 177, 205, 301, 883, 1352
BccI CCATC 1 cut(s) 487
BceAI ACGGC 2 cut(s) 90, 238
BciT130I CCWGG 2 cut(s) 436, 581
BciVI GTATCC 1 cut(s) 441
BclI TGATCA 1 cut(s) 333
BcoDI GTCTC 2 cut(s) 17, 1243
BfaI CTAG 2 cut(s) 324, 1016
BfmI CTRYAG 3 cut(s) 191, 212, 1184
BfuI GTATCC 1 cut(s) 441
BglI GCCNNNNNGGC 1 cut(s) 449
BglII AGATCT 1 cut(s) 814
BlnI CCTAGG 1 cut(s) 323
Bme1390I CCNGG 2 cut(s) 436, 581
BmeT110I CYCGRG 1 cut(s) 470
BmiI GGNNCC 2 cut(s) 183, 344
BmrFI CCNGG 2 cut(s) 436, 581
BpiI GAAGAC 1 cut(s) 1338
BplI GAGNNNNNCTC 4 cut(s) 628, 660, 1342, 1374
Bpu10I CCTNAGC 2 cut(s) 624, 857
BpuEI CTTGAG 4 cut(s) 470, 653, 671, 691
BsaAI YACGTR 2 cut(s) 199, 427
BsaBI GATNNNNATC 4 cut(s) 125, 332, 712, 954
BsaJI CCNNGG 6 cut(s) 185, 323, 434, 447, 464, 1048
BsaXI ACNNNNNCTCC 2 cut(s) 1378, 1408
Bsc4I CCNNNNNNNGG 2 cut(s) 1245, 1350
Bse118I RCCGGY 1 cut(s) 452
Bse1I ACTGG 1 cut(s) 902
Bse3DI GCAATG 1 cut(s) 689
Bse8I GATNNNNATC 4 cut(s) 125, 332, 712, 954
BseBI CCWGG 2 cut(s) 436, 581
BseDI CCNNGG 6 cut(s) 185, 323, 434, 447, 464, 1048
BseGI GGATG 5 cut(s) 498, 589, 1030, 1102, 1201
BseJI GATNNNNATC 4 cut(s) 125, 332, 712, 954
BseLI CCNNNNNNNGG 2 cut(s) 1245, 1350
BseMI GCAATG 1 cut(s) 689
BseMII CTCAG 4 cut(s) 59, 1189, 1308, 1373
BseNI ACTGG 1 cut(s) 902
BseRI GAGGAG 4 cut(s) 301, 488, 552, 1386
BseSI GKGCMC 1 cut(s) 323
BseXI GCAGC 5 cut(s) 177, 205, 301, 883, 1352
BseYI CCCAGC 2 cut(s) 414, 874
BsgI GTGCAG 1 cut(s) 301
Bsh1236I CGCG 2 cut(s) 67, 187
Bsh1285I CGRYCG 1 cut(s) 229
BshFI GGCC 2 cut(s) 452, 565
BsiEI CGRYCG 1 cut(s) 229
BsiHKCI CYCGRG 1 cut(s) 470
BsiSI CCGG 1 cut(s) 453
BslI CCNNNNNNNGG 2 cut(s) 1245, 1350
BsmAI GTCTC 2 cut(s) 17, 1243
BsnI GGCC 2 cut(s) 452, 565
BsoBI CYCGRG 1 cut(s) 470
Bsp1286I GDGCHC 1 cut(s) 323
Bsp19I CCATGG 1 cut(s) 447
BspACI CCGC 8 cut(s) 103, 185, 187, 274, 380, 444, 556, 562
BspANI GGCC 2 cut(s) 452, 565
BspCNI CTCAG 4 cut(s) 58, 1188, 1309, 1372
BspFNI CGCG 2 cut(s) 67, 187
BspHI TCATGA 1 cut(s) 657
BspLI GGNNCC 2 cut(s) 183, 344
BspMAI CTGCAG 2 cut(s) 195, 216
BspPI GGATC 3 cut(s) 115, 446, 1125
BspQI GCTCTTC 1 cut(s) 999
BsrBI CCGCTC 1 cut(s) 274
BsrDI GCAATG 1 cut(s) 689
BsrFI RCCGGY 1 cut(s) 452
BsrI ACTGG 1 cut(s) 902
BssAI RCCGGY 1 cut(s) 452
BssECI CCNNGG 6 cut(s) 185, 323, 434, 447, 464, 1048
BssSI CACGAG 1 cut(s) 1260
BssT1I CCWWGG 4 cut(s) 323, 447, 464, 1048
Bst2BI CACGAG 1 cut(s) 1260
Bst2UI CCWGG 2 cut(s) 436, 581
Bst4CI ACNGT 1 cut(s) 1390
Bst6I CTCTTC 3 cut(s) 651, 970, 999
BstBAI YACGTR 2 cut(s) 199, 427
BstC8I GCNNGC 4 cut(s) 6, 319, 391, 560
BstDEI CTNAG 6 cut(s) 45, 624, 857, 1175, 1317, 1359
BstDSI CCRYGG 2 cut(s) 185, 447
BstENI CCTNNNNNAGG 1 cut(s) 1348
BstF5I GGATG 5 cut(s) 498, 589, 1030, 1102, 1201
BstFNI CGCG 2 cut(s) 67, 187
BstHHI GCGC 1 cut(s) 579
BstMAI GTCTC 2 cut(s) 17, 1243
BstMCI CGRYCG 1 cut(s) 229
BstMWI GCNNNNNNNGC 3 cut(s) 193, 420, 449
BstNI CCWGG 2 cut(s) 436, 581
BstSCI CCNGG 2 cut(s) 434, 579
BstSFI CTRYAG 3 cut(s) 191, 212, 1184
BstSLI GKGCMC 1 cut(s) 323
BstUI CGCG 2 cut(s) 67, 187
BstV1I GCAGC 5 cut(s) 177, 205, 301, 883, 1352
BstV2I GAAGAC 1 cut(s) 1338
BstX2I RGATCY 1 cut(s) 814
BstYI RGATCY 1 cut(s) 814
BsuI GTATCC 1 cut(s) 441
BsuRI GGCC 2 cut(s) 452, 565
BtgI CCRYGG 2 cut(s) 185, 447
BtsCI GGATG 5 cut(s) 498, 589, 1030, 1102, 1201
BtsI GCAGTG 1 cut(s) 783
BtsIMutI CAGTG 3 cut(s) 74, 783, 1278
Cac8I GCNNGC 4 cut(s) 6, 319, 391, 560
CciI TCATGA 1 cut(s) 657
CfoI GCGC 1 cut(s) 579
Cfr10I RCCGGY 1 cut(s) 452
Cfr42I CCGCGG 1 cut(s) 188
CseI GACGC 1 cut(s) 1232
Csp6I GTAC 1 cut(s) 262
CspCI CAANNNNNGTGG 2 cut(s) 752, 787
CviAII CATG 4 cut(s) 448, 658, 1285, 1373
CviQI GTAC 1 cut(s) 262
DdeI CTNAG 6 cut(s) 45, 624, 857, 1175, 1317, 1359
DraI TTTAAA 1 cut(s) 934
DraIII CACNNNGTG 1 cut(s) 914
EaeI YGGCCR 2 cut(s) 450, 563
Eam1104I CTCTTC 3 cut(s) 651, 970, 999
EarI CTCTTC 3 cut(s) 651, 970, 999
EciI GGCGGA 1 cut(s) 92
Eco130I CCWWGG 4 cut(s) 323, 447, 464, 1048
Eco57I CTGAAG 2 cut(s) 687, 1317
Eco72I CACGTG 1 cut(s) 199
Eco88I CYCGRG 1 cut(s) 470
EcoNI CCTNNNNNAGG 1 cut(s) 1348
EcoRII CCWGG 2 cut(s) 434, 579
EcoT14I CCWWGG 4 cut(s) 323, 447, 464, 1048
ErhI CCWWGG 4 cut(s) 323, 447, 464, 1048
FaeI CATG 4 cut(s) 451, 661, 1288, 1376
FalI AAGNNNNNCTT 4 cut(s) 368, 400, 1205, 1237
FatI CATG 4 cut(s) 447, 657, 1284, 1372
FbaI TGATCA 1 cut(s) 333
FblI GTMKAC 1 cut(s) 1183
FokI GGATG 5 cut(s) 505, 596, 1037, 1109, 1208
FspBI CTAG 2 cut(s) 324, 1016
GlaI GCGC 1 cut(s) 578
GsaI CCCAGC 2 cut(s) 418, 878
HaeIII GGCC 2 cut(s) 452, 565
HapII CCGG 1 cut(s) 453
HgaI GACGC 1 cut(s) 1232
HhaI GCGC 1 cut(s) 579
Hin1II CATG 4 cut(s) 451, 661, 1288, 1376
Hin6I GCGC 1 cut(s) 577
HinP1I GCGC 1 cut(s) 577
HincII GTYRAC 1 cut(s) 982
HindII GTYRAC 1 cut(s) 982
HindIII AAGCTT 1 cut(s) 1412
HinfI GANTC 8 cut(s) 146, 159, 357, 544, 788, 1031, 1082, 1313
HpaII CCGG 1 cut(s) 453
HphI GGTGA 1 cut(s) 493
Hpy166II GTNNAC 4 cut(s) 792, 835, 982, 1184
Hpy188I TCNGA 9 cut(s) 137, 220, 231, 409, 949, 1178, 1248, 1318, 1386
Hpy188III TCNNGA 5 cut(s) 301, 487, 650, 658, 705
Hpy8I GTNNAC 4 cut(s) 792, 835, 982, 1184
Hpy99I CGWCG 3 cut(s) 302, 509, 1248
HpyAV CCTTC 3 cut(s) 711, 859, 1183
HpyCH4III ACNGT 1 cut(s) 1390
HpyCH4IV ACGT 3 cut(s) 198, 351, 426
HpyF10VI GCNNNNNNNGC 3 cut(s) 193, 420, 449
HpyF3I CTNAG 6 cut(s) 45, 624, 857, 1175, 1317, 1359
HpySE526I ACGT 3 cut(s) 198, 351, 426
Hsp92II CATG 4 cut(s) 451, 661, 1288, 1376
HspAI GCGC 1 cut(s) 577
Ksp22I TGATCA 1 cut(s) 333
KspI CCGCGG 1 cut(s) 188
LguI GCTCTTC 1 cut(s) 999
LmnI GCTCC 4 cut(s) 517, 628, 868, 1399
Lsp1109I GCAGC 5 cut(s) 177, 205, 301, 883, 1352
MaeI CTAG 2 cut(s) 324, 1016
MaeII ACGT 3 cut(s) 198, 351, 426
MaeIII GTNAC 4 cut(s) 499, 893, 904, 1255
MbiI CCGCTC 1 cut(s) 274
MboII GAAGA 6 cut(s) 638, 987, 1016, 1181, 1310, 1343
MfeI CAATTG 1 cut(s) 617
MflI RGATCY 1 cut(s) 814
MhlI GDGCHC 1 cut(s) 323
MluCI AATT 7 cut(s) 18, 59, 617, 676, 765, 828, 1042
MluI ACGCGT 1 cut(s) 65
MlyI GAGTC 3 cut(s) 153, 797, 1322
MmeI TCCRAC 2 cut(s) 387, 1226
MseI TTAA 4 cut(s) 23, 933, 1058, 1347
MslI CAYNNNNRTG 1 cut(s) 1283
MspA1I CMGCKG 2 cut(s) 187, 874
MspI CCGG 1 cut(s) 453
MspR9I CCNGG 2 cut(s) 436, 581
MunI CAATTG 1 cut(s) 617
MvaI CCWGG 2 cut(s) 436, 581
MvnI CGCG 2 cut(s) 67, 187
MwoI GCNNNNNNNGC 3 cut(s) 193, 420, 449
NcoI CCATGG 1 cut(s) 447
NlaIII CATG 4 cut(s) 451, 661, 1288, 1376
NlaIV GGNNCC 2 cut(s) 183, 344
NmuCI GTSAC 1 cut(s) 499
PaeR7I CTCGAG 1 cut(s) 470
PagI TCATGA 1 cut(s) 657
PciSI GCTCTTC 1 cut(s) 999
PcsI WCGNNNNNNNCGW 1 cut(s) 504
PfeI GAWTC 5 cut(s) 146, 357, 544, 1031, 1082
Ple19I CGATCG 1 cut(s) 229
PleI GAGTC 3 cut(s) 153, 796, 1321
PmaCI CACGTG 1 cut(s) 199
PmlI CACGTG 1 cut(s) 199
PpsI GAGTC 3 cut(s) 153, 796, 1321
Ppu21I YACGTR 2 cut(s) 199, 427
PsiI TTATAA 1 cut(s) 954
Psp6I CCWGG 2 cut(s) 434, 579
PspCI CACGTG 1 cut(s) 199
PspFI CCCAGC 2 cut(s) 414, 874
PspGI CCWGG 2 cut(s) 434, 579
PspN4I GGNNCC 2 cut(s) 183, 344
PspXI VCTCGAGB 1 cut(s) 470
PstI CTGCAG 2 cut(s) 195, 216
PsuI RGATCY 1 cut(s) 814
PvuI CGATCG 1 cut(s) 229
PvuII CAGCTG 1 cut(s) 874
RsaI GTAC 1 cut(s) 263
RsaNI GTAC 1 cut(s) 262
RseI CAYNNNNRTG 1 cut(s) 1283
SacII CCGCGG 1 cut(s) 188
SapI GCTCTTC 1 cut(s) 999
SaqAI TTAA 4 cut(s) 23, 933, 1058, 1347
SchI GAGTC 3 cut(s) 153, 797, 1322
ScrFI CCNGG 2 cut(s) 436, 581
SduI GDGCHC 1 cut(s) 323
SfcI CTRYAG 3 cut(s) 191, 212, 1184
Sfr274I CTCGAG 1 cut(s) 470
Sfr303I CCGCGG 1 cut(s) 188
SgrBI CCGCGG 1 cut(s) 188
SlaI CTCGAG 1 cut(s) 470
SmiMI CAYNNNNRTG 1 cut(s) 1283
SmlI CTYRAG 5 cut(s) 470, 485, 632, 650, 670
SmoI CTYRAG 5 cut(s) 470, 485, 632, 650, 670
Sse9I AATT 7 cut(s) 18, 59, 617, 676, 765, 828, 1042
SsiI CCGC 8 cut(s) 103, 185, 187, 274, 380, 444, 556, 562
SspMI CTAG 2 cut(s) 324, 1016
StyD4I CCNGG 2 cut(s) 434, 579
StyI CCWWGG 4 cut(s) 323, 447, 464, 1048
TaaI ACNGT 1 cut(s) 1390
TaiI ACGT 3 cut(s) 201, 354, 429
TaqI TCGA 6 cut(s) 119, 236, 270, 471, 547, 1108
TasI AATT 7 cut(s) 18, 59, 617, 676, 765, 828, 1042
TauI GCSGC 5 cut(s) 190, 382, 446, 558, 565
TfiI GAWTC 5 cut(s) 146, 357, 544, 1031, 1082
Tru1I TTAA 4 cut(s) 23, 933, 1058, 1347
Tru9I TTAA 4 cut(s) 23, 933, 1058, 1347
TscAI CASTG 3 cut(s) 81, 783, 1285
TseFI GTSAC 1 cut(s) 499
TseI GCWGC 5 cut(s) 190, 193, 314, 871, 1340
Tsp45I GTSAC 1 cut(s) 499
TspDTI ATGAA 4 cut(s) 349, 1044, 1113, 1301
TspGWI ACGGA 2 cut(s) 194, 1325
TspRI CASTG 3 cut(s) 81, 783, 1285
XagI CCTNNNNNAGG 1 cut(s) 1348
XapI RAATTY 2 cut(s) 59, 676
XhoI CTCGAG 1 cut(s) 470
XmaJI CCTAGG 1 cut(s) 323
XmiI GTMKAC 1 cut(s) 1183
XspI CTAG 2 cut(s) 324, 1016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.