Rh5AG475100

Ferrous iron transport protein B

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0005204
Physical Location & Seq
Reverse (-)
81491578 .. 81537606
46029 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG475100.1

Sequence Viewer

Length: 363 bp
ATGCTCAGCCGAAGAGGAACGATTGTTGCGCCTGAGGATGTTGAGAAAGTGGAGGCAGAGGACTATGAGCAATTGGCTAAGGAGCTTGAGAGTGCTTCTCTTCTTGAGATCATGACAAGGCGCTTGAGAAATTCGGCAACAACATTGCTATTGCCTTCAGGAAGGTCAAATGTTGGGAAATCGTCACTACTTAATGCACTCACCAGAAATTGGGATGTTGCACGAACATCAGATAAGCCTCGTCTTACTCAGTTGGGTTCTGGTTTTAAAGGCTTCGTGCTTACGGTGGTCGCCGTTGAGGTTCAGAGGAGGAGTCCGGTGGGATTCAAGCATGAATTTCAATATCTTCAGCCCTGGCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MMR_HSR1

Protein Analysis

120

Amino Acids

13.5

Weight (kDa)

9.51

Isoelectric Point (pI)

49.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 54 - 84 3.7e-07 50S ribosome-binding GTPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 210
AcsI RAATTY 2 cut(s) 130, 335
AcuI CTGAAG 2 cut(s) 141, 332
AfiI CCNNNNNNNGG 1 cut(s) 210
AgsI TTSAA 2 cut(s) 328, 341
AjnI CCWGG 1 cut(s) 353
AluBI AGCT 1 cut(s) 85
AluI AGCT 1 cut(s) 85
ApoI RAATTY 2 cut(s) 130, 335
AspLEI GCGC 2 cut(s) 31, 123
AsuHPI GGTGA 1 cut(s) 193
AxyI CCTNAGG 1 cut(s) 33
BceAI ACGGC 1 cut(s) 278
BciT130I CCWGG 1 cut(s) 355
BfoI RGCGCY 1 cut(s) 124
BlpI GCTNAGC 1 cut(s) 5
Bme1390I CCNGG 1 cut(s) 355
BmrFI CCNGG 1 cut(s) 355
BplI GAGNNNNNCTC 2 cut(s) 82, 114
Bpu10I CCTNAGC 1 cut(s) 78
Bpu1102I GCTNAGC 1 cut(s) 5
BpuEI CTTGAG 3 cut(s) 107, 125, 145
BsaJI CCNNGG 1 cut(s) 353
BsaWI WCCGGW 1 cut(s) 316
Bsc4I CCNNNNNNNGG 1 cut(s) 210
Bse21I CCTNAGG 1 cut(s) 33
Bse3DI GCAATG 1 cut(s) 143
BseBI CCWGG 1 cut(s) 355
BseDI CCNNGG 1 cut(s) 353
BseGI GGATG 2 cut(s) 43, 220
BseLI CCNNNNNNNGG 1 cut(s) 210
BseMI GCAATG 1 cut(s) 143
BseMII CTCAG 3 cut(s) 19, 24, 263
BseRI GAGGAG 2 cut(s) 322, 325
BsiSI CCGG 1 cut(s) 317
BslI CCNNNNNNNGG 1 cut(s) 210
Bsp143I GATC 1 cut(s) 108
Bsp1720I GCTNAGC 1 cut(s) 5
BspCNI CTCAG 3 cut(s) 18, 25, 262
BspHI TCATGA 1 cut(s) 111
BsrDI GCAATG 1 cut(s) 143
BssECI CCNNGG 1 cut(s) 353
BssMI GATC 1 cut(s) 108
Bst2UI CCWGG 1 cut(s) 355
Bst4CI ACNGT 1 cut(s) 286
Bst6I CTCTTC 2 cut(s) 7, 105
BstDEI CTNAG 4 cut(s) 5, 33, 78, 249
BstF5I GGATG 2 cut(s) 43, 220
BstH2I RGCGCY 1 cut(s) 124
BstHHI GCGC 2 cut(s) 31, 123
BstKTI GATC 1 cut(s) 111
BstMBI GATC 1 cut(s) 108
BstNI CCWGG 1 cut(s) 355
BstSCI CCNGG 1 cut(s) 353
Bsu36I CCTNAGG 1 cut(s) 33
BtsCI GGATG 2 cut(s) 43, 220
CciI TCATGA 1 cut(s) 111
CfoI GCGC 2 cut(s) 31, 123
CviAII CATG 2 cut(s) 112, 332
CviJI RGCY 7 cut(s) 9, 77, 85, 238, 273, 352, 358
CviKI_1 RGCY 7 cut(s) 9, 77, 85, 238, 273, 352, 358
DdeI CTNAG 4 cut(s) 5, 33, 78, 249
DpnI GATC 1 cut(s) 110
DpnII GATC 1 cut(s) 108
DraI TTTAAA 1 cut(s) 268
Eam1104I CTCTTC 2 cut(s) 7, 105
EarI CTCTTC 2 cut(s) 7, 105
Eco57I CTGAAG 2 cut(s) 141, 332
Eco81I CCTNAGG 1 cut(s) 33
EcoRII CCWGG 1 cut(s) 353
FaeI CATG 2 cut(s) 115, 335
FaiI YATR 3 cut(s) 66, 113, 333
FatI CATG 2 cut(s) 111, 331
FokI GGATG 2 cut(s) 50, 227
GlaI GCGC 2 cut(s) 30, 122
HaeII RGCGCY 1 cut(s) 124
HapII CCGG 1 cut(s) 317
HhaI GCGC 2 cut(s) 31, 123
Hin1II CATG 2 cut(s) 115, 335
Hin6I GCGC 2 cut(s) 29, 121
HinP1I GCGC 2 cut(s) 29, 121
HinfI GANTC 2 cut(s) 313, 324
HpaII CCGG 1 cut(s) 317
HphI GGTGA 1 cut(s) 193
Hpy188I TCNGA 3 cut(s) 232, 306, 362
Hpy188III TCNNGA 3 cut(s) 104, 112, 159
HpyAV CCTTC 2 cut(s) 156, 165
HpyCH4III ACNGT 1 cut(s) 286
HpyCH4V TGCA 2 cut(s) 197, 221
HpyF3I CTNAG 4 cut(s) 5, 33, 78, 249
Hsp92II CATG 2 cut(s) 115, 335
HspAI GCGC 2 cut(s) 29, 121
Kzo9I GATC 1 cut(s) 108
LmnI GCTCC 1 cut(s) 82
LpnPI CCDG 6 cut(s) 45, 144, 217, 246, 330, 340
MaeIII GTNAC 1 cut(s) 183
MalI GATC 1 cut(s) 110
MboI GATC 1 cut(s) 108
MboII GAAGA 3 cut(s) 24, 92, 338
MfeI CAATTG 1 cut(s) 71
MluCI AATT 4 cut(s) 71, 130, 208, 335
MlyI GAGTC 1 cut(s) 322
MnlI CCTC 8 cut(s) 8, 28, 46, 52, 249, 292, 300, 303
MseI TTAA 2 cut(s) 192, 267
MspI CCGG 1 cut(s) 317
MspR9I CCNGG 1 cut(s) 355
MunI CAATTG 1 cut(s) 71
MvaI CCWGG 1 cut(s) 355
NdeII GATC 1 cut(s) 108
NlaIII CATG 2 cut(s) 115, 335
NmuCI GTSAC 1 cut(s) 183
PagI TCATGA 1 cut(s) 111
PfeI GAWTC 1 cut(s) 324
PflMI CCANNNNNTGG 1 cut(s) 210
PleI GAGTC 1 cut(s) 321
PpsI GAGTC 1 cut(s) 321
Psp6I CCWGG 1 cut(s) 353
PspGI CCWGG 1 cut(s) 353
SaqAI TTAA 2 cut(s) 192, 267
Sau3AI GATC 1 cut(s) 108
SchI GAGTC 1 cut(s) 322
ScrFI CCNGG 1 cut(s) 355
SetI ASST 3 cut(s) 87, 167, 303
SmlI CTYRAG 3 cut(s) 86, 104, 124
SmoI CTYRAG 3 cut(s) 86, 104, 124
Sse9I AATT 4 cut(s) 71, 130, 208, 335
StyD4I CCNGG 1 cut(s) 353
TaaI ACNGT 1 cut(s) 286
TasI AATT 4 cut(s) 71, 130, 208, 335
TfiI GAWTC 1 cut(s) 324
Tru1I TTAA 2 cut(s) 192, 267
Tru9I TTAA 2 cut(s) 192, 267
TseFI GTSAC 1 cut(s) 183
Tsp45I GTSAC 1 cut(s) 183
TspDTI ATGAA 1 cut(s) 348
Van91I CCANNNNNTGG 1 cut(s) 210
XapI RAATTY 2 cut(s) 130, 335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.