RchiOBHm_Chr6g0307251

Lipolytic acyl hydrolase (LAH)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
65745468 .. 65745825
358 bp
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UTR
Exon/CDS
Intron
PRQ27625

Sequence Viewer

Length: 231 bp
ATGGATAATGCTACGCCCGAAAACTTGAAAAAACTTGTAAAAGTGGGAGAGGCACTGTTAAAGAAACAAGCTTCAAAGTTGAATATAGCTACCGGCCTCCATGAGCCTGATGAACGTCATATTACTAATGAAGAGGCTCTCAGAAGGGTAGCGGCAGTTCTCTCCAAAGAGAAGAAGGAACGTGCAATCAGATCAGCAGCACCACAAGCAAACCCAGCATCTGCCAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

76

Amino Acids

8.25

Weight (kDa)

9.69

Isoelectric Point (pI)

47.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 152
AgsI TTSAA 3 cut(s) 28, 75, 82
AluBI AGCT 3 cut(s) 71, 89, 228
AluI AGCT 3 cut(s) 71, 89, 228
AlwNI CAGNNNCTG 1 cut(s) 221
AoxI GGCC 1 cut(s) 94
ApeKI GCWGC 1 cut(s) 197
BbvI GCAGC 1 cut(s) 209
BisI GCNGC 2 cut(s) 153, 198
BlsI GCNGC 2 cut(s) 154, 199
BmsI GCATC 1 cut(s) 227
Bse118I RCCGGY 1 cut(s) 92
BseMII CTCAG 1 cut(s) 154
BseXI GCAGC 1 cut(s) 209
BseYI CCCAGC 1 cut(s) 214
BshFI GGCC 1 cut(s) 96
BsiSI CCGG 1 cut(s) 93
BsnI GGCC 1 cut(s) 96
Bsp143I GATC 1 cut(s) 191
BspACI CCGC 1 cut(s) 152
BspANI GGCC 1 cut(s) 96
BspCNI CTCAG 1 cut(s) 153
BsrFI RCCGGY 1 cut(s) 92
BssAI RCCGGY 1 cut(s) 92
BssMI GATC 1 cut(s) 191
Bst4CI ACNGT 1 cut(s) 57
Bst6I CTCTTC 1 cut(s) 126
BstC8I GCNNGC 1 cut(s) 226
BstDEI CTNAG 1 cut(s) 140
BstKTI GATC 1 cut(s) 194
BstMBI GATC 1 cut(s) 191
BstMWI GCNNNNNNNGC 2 cut(s) 206, 215
BstV1I GCAGC 1 cut(s) 209
BsuRI GGCC 1 cut(s) 96
BtsIMutI CAGTG 1 cut(s) 53
Cac8I GCNNGC 1 cut(s) 226
CaiI CAGNNNCTG 1 cut(s) 221
Cfr10I RCCGGY 1 cut(s) 92
CviAII CATG 1 cut(s) 101
CviJI RGCY 6 cut(s) 71, 89, 96, 106, 137, 228
CviKI_1 RGCY 6 cut(s) 71, 89, 96, 106, 137, 228
DdeI CTNAG 1 cut(s) 140
DpnI GATC 1 cut(s) 193
DpnII GATC 1 cut(s) 191
Eam1104I CTCTTC 1 cut(s) 126
EarI CTCTTC 1 cut(s) 126
FaeI CATG 1 cut(s) 104
FaiI YATR 3 cut(s) 86, 102, 120
FatI CATG 1 cut(s) 100
Fnu4HI GCNGC 2 cut(s) 153, 198
Fsp4HI GCNGC 2 cut(s) 153, 198
GluI GCNGC 2 cut(s) 153, 198
GsaI CCCAGC 1 cut(s) 218
HaeIII GGCC 1 cut(s) 96
HapII CCGG 1 cut(s) 93
Hin1II CATG 1 cut(s) 104
HindIII AAGCTT 1 cut(s) 69
HpaII CCGG 1 cut(s) 93
Hpy188I TCNGA 2 cut(s) 143, 191
HpyAV CCTTC 2 cut(s) 138, 169
HpyCH4III ACNGT 1 cut(s) 57
HpyCH4IV ACGT 2 cut(s) 115, 181
HpyCH4V TGCA 1 cut(s) 185
HpyF10VI GCNNNNNNNGC 2 cut(s) 206, 215
HpyF3I CTNAG 1 cut(s) 140
HpySE526I ACGT 2 cut(s) 115, 181
Hsp92II CATG 1 cut(s) 104
Kzo9I GATC 1 cut(s) 191
LpnPI CCDG 2 cut(s) 106, 120
Lsp1109I GCAGC 1 cut(s) 209
LweI GCATC 1 cut(s) 227
MaeII ACGT 2 cut(s) 115, 181
MalI GATC 1 cut(s) 193
MboI GATC 1 cut(s) 191
MboII GAAGA 2 cut(s) 143, 184
MnlI CCTC 3 cut(s) 43, 107, 127
MseI TTAA 1 cut(s) 59
MspA1I CMGCKG 1 cut(s) 228
MspI CCGG 1 cut(s) 93
MwoI GCNNNNNNNGC 2 cut(s) 206, 215
NdeII GATC 1 cut(s) 191
NlaIII CATG 1 cut(s) 104
PkrI GCNGC 2 cut(s) 154, 199
PspFI CCCAGC 1 cut(s) 214
PsrI GAACNNNNNNTAC 2 cut(s) 141, 173
PstNI CAGNNNCTG 1 cut(s) 221
PvuII CAGCTG 1 cut(s) 228
SaqAI TTAA 1 cut(s) 59
SatI GCNGC 2 cut(s) 153, 198
Sau3AI GATC 1 cut(s) 191
SetI ASST 5 cut(s) 73, 91, 118, 184, 230
SfaNI GCATC 1 cut(s) 227
SsiI CCGC 1 cut(s) 152
TaaI ACNGT 1 cut(s) 57
TaiI ACGT 2 cut(s) 118, 184
TauI GCSGC 1 cut(s) 155
Tru1I TTAA 1 cut(s) 59
Tru9I TTAA 1 cut(s) 59
TscAI CASTG 1 cut(s) 60
TseI GCWGC 1 cut(s) 197
TspDTI ATGAA 2 cut(s) 126, 144
TspRI CASTG 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.