Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003463

Physical Location & Seq

Genomic Coordinates Forward (+)

17760312 .. 17766583

Gene Structure 6272 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0201800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3033 bp

ATGTCCGGCCGTCACGAGAAGGAGAAAGGAGGCGTCAACGTCCAGGTCCTTCTTCGATGCAGGCCGTTTAGTGACGATGAGTTGCGGAGCAACGCGCCACAGGTGATAACATGTAATGAGTACCAGAGAGAAGTGGCTGTGTCTCAGAGCATTGCGGGGAAGCATATCGATAGGGTTTTCACTTTCGATAAGGTTTTTGGTCCTAATGCGCAGCAGAGAGATCTTTATGACCAAGCTGTGATTCCGATAGTAAATGAAGTCTTGGAAGGGTTCAACTGCACCATTTTTGCTTACGGGCAAACTGGTACAGGGAAGACTTACACAATGGAGGGTGAATGCAAAAAGGCAAAGAGTGGGCCAAATGGAGAATTGCCTCCTGGAGCTGGAGTTATTCCGAGGGCTGTCCAGCAGATTTTTGATACCCTTGAGGGCCAGTGCACAGAGTACAGTGTAAAAGTTACTTTTTTAGAGCTTTACAATGAGGAGATTACCGATCTGCTTGCCCCAGAAGAACTGTCTAGGGTTCCTGCAGAGGAGAAGCAGAAAAAGCAGTTGCCTCTAATGGAGGATGGGAAAGGTGGAGTCCTCGTAAGAGGTCTGGAGGAGGAAATTGTGACGAGTGCCAGTGAGATTTTCACTCTTCTTGAAAGAGGGTCTGCGAAACGTCGCACTGCTGAAACTTTATTGAACAAACAATCTAGTCGGTCACATTCTCTATTTTCCATCACGATACACATTAAGGAAGCAACTCCAGAAGGTGAGGAGCTGATCAAGTGCGGAAAGTTGAACTTGGTAGATTTGGCTGGCTCAGAAAACATATCTCGTTCGGGTGCTAGAGAGGGTCGTGCACGAGAAGCTGGAGAAATCAACAAAAGTTTACTGACTTTGGGGCGAGTAATCAATGCTTTGGTGGAGCATCTTGGACATATTCCATACAGGGATAGCAAGCTTACTAGGTTACTTCGCGATTCACTTGGGGGAAGAACCAAGACTTGCATAATTGCTACAGTCTCACCAGCTGTCCATTGTCTGGAAGAAACCCTGAGCACGTTGGATTATGCACACAGGGCCAAAAATATAAAAAATAAGCCTGAGGTGAATCAAAAGATGATGAAATCAACACTTATCAAGGATCTTTACGGTGAAATTGAACGACTTAAAGCAGAGGTGTATGCTGCACGTGAGAAGAATGGTGTTTATATCCCAAAGGAGCGGTACTATCAAGAAGAAAGTGAAAGGAAGGCTATGGCTGATCAGATTGAGCAAATGGGGCTTACCCTAGAAACCCATCAGAAGAAATTTGAGGAGTTGCAGGATAAATATGTCGTTCAGGTTCGACAGTGTCATGATTTGAGCAGCAAACTTGAATCCACTGAGAAAACGTTGGATCATACTGCTAAACTGCTTTCTAACACTGAAGAAGACTTGATGAAATGTCGCTATGCTCTGAAGGAGAAATATTTTATTATCTCTGAGCAGAAAAAAGCTGAAAATGCTTTGACTCTTCAAGCATGCACTTTGCAGTCTGACCTGGAGAAAGCACTCCAGGATAATGCTTCATTGTTTCAAAAAATTGGTAGAGAGGACAAGCTGAGTGCTGATAATAGGCTGGTAGTGAATAGTTACCAGGAAGATCTTGCCAAGCGAGTTGGTTCCCTTTGCCAGATGGTGGAAACTTCAATGTCTCGTCAGAATGAACACCTTCAGGGTGTTGAGAACCTCTGTCAGTCCTTTTTACTGGCCCATGAAAAGGCGGTTATGGAAATGAAGAAGAAAGTGGCATCATCGAGGGCTTTGTTTGTTTCTCATATTGAGGCAGTGCAAAATGTTGTGCGTTTGCACAAGGCGAGCTCTAATGCTGGTCTGGATGAAATTTCATCATTGGCTTCTGCCAATACACATTCTATTGAAGAATTTCTAGATTCGGAGGCTGGTGAATCAGCTTCGATATTTCAGAATCTTCTGAGTGGTCTCTCAACACAGCAGGGAGAGATGACAATTTTTGCGAAGGAATTGAAACAGAAATTCCATTCTAGTATTAATCAAACAAAGGAAATCTCTGAGTACTCTCAAGGATTTCTACACAAGCTTATGGAAGAATCAAAAAGGCTTGAAGATCATGTGACAAATGCTAACGATATTAAAATGAAGAGCATTTCTGAATTTCAGAAGGCTTATGAGGAGCAGTCAAAATCTGATGCAGAGAAGCTTATTGCCAATATCTCTAATTTGGTCACCGATCATATTTGTCGTCAAAAAGAGATGGTGGATGCCAAGCTTGTTGATTTCAGAGAAAGTGCAATTGCAGACAAGTCTTTCTTGGATGTGCACGTTTCTTCTATGGATGGTATTTCCACAGATGCAAAAAGAAAATGGATGGAATTTTCTATGCAAGCAGAGAATGATGCTAAGGATGGTGTTGATTACTCTGCTGCAAAACATTGCCGCATGGAGGTACTTCTGCAGCAATGTGTAAGTACTGCTGATTCAGCTTCGAAGCACTGGAAAAAGACGCAGGACTCTGTGAATGATATGGGAAATAAACATGTTTCAGCTATGGGGTCGCTCATCAGGAATGCTTATGATAGTAATGAGCAACATGATGATGAAATCAATTCAGTGAGGACTGCAGTTGAGCAAGATGTGGCAAAGGATAGTGAGGATGCCCTTCAGCATGTAGAAAGTATGGATGAGCAGGAGCGGGAATCTATATCTGGAATCTTGGAGGTTGTCAAGGCTCAATCAACCACCCTTGAGACTTTCCGGGAGGATCACTGTGGGCAAGCTGCATCTATTGAAGAGAGGGCGCGGGATACCTTTCAGAACCAGTATATGGATTATGAACCGTGTGGTTCTACACCAGAAAAGGCCGAACCAGAAGTTCCAACCAAGGGAACAATCGAGTCACTACGAGCCATGCCAATGGAAGCTCTTGTTGAGGAATTTCGGGAAAACAATTCATATGATTCATTTGATGTGAAGGAGCTGAAACCATCTCTTATACCACGCTCGCCACTTACACAACTCAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Patatin

Protein Analysis

1010

Amino Acids

113.44

Weight (kDa)

5.39

Isoelectric Point (pI)

50.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	13 - 167	2.6e-23	Microtubule binding
Kinesin	PF00225	19 - 360	2.8e-114	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003463)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g34810 FvH4_4g24290
malus_domestica	MD08G1100500.v1.1 MD08G1104500.v1.1 MD15G1085400.v1.1
prunus_persica	Prupe.1G439500_v2.0.a1 Prupe.1G439500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0482861 RchiOBHm_Chr6g0307251 RchiOBHm_Chr6g0307311 RchiOBHm_Chr6g0307331 RchiOBHm_Chr6g0307501 RchiOBHm_Chr6g0307671
rosa_laevigata	RLG00000010710 RLG00000010723
rosa_multiflora	Rmu_co8330847.1_g000001 Rmu_sc0000031.1_g000021 Rmu_ssc0000175.1_g000027
rosa_roxburghii	Rroxscaffold_6G00398860 Rroxscaffold_7G00160970
rosa_rugosa	Rorug03G0201800 Rorug06G0358100 Rorug06G0358700 Rorug06G0358900
rosa_samantha	Rh3AG250500 Rh3BG286900 Rh3BG287000 Rh6AG468600 Rh6AG468800 Rh6BG431100 Rh6BG432000 Rh6BG479100 Rh6BG479400 Rh6CG484800
rosa_wichuraiana	Rw3G022660 Rw6G040930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	210
AccB7I	CCANNNNNTGG	3 cut(s)	1030, 1669, 2833
AccBSI	CCGCTC	2 cut(s)	1213, 2701
AccII	CGCG	3 cut(s)	95, 966, 2809
AciI	CCGC	8 cut(s)	85, 155, 777, 1213, 1754, 2446, 2701, 2809
AclI	AACGTT	1 cut(s)	1382
AclWI	GGATC	3 cut(s)	1140, 1395, 2778
AcoI	YGGCCR	1 cut(s)	7
AcsI	RAATTY	7 cut(s)	1298, 1872, 1913, 2024, 2162, 2381, 2942
AcuI	CTGAAG	4 cut(s)	1437, 1469, 1688, 2654
AcvI	CACGTG	1 cut(s)	1181
AcyI	GRCGYC	1 cut(s)	33
AfaI	GTAC	7 cut(s)	122, 307, 446, 1217, 2066, 2457, 2479
AfiI	CCNNNNNNNGG	7 cut(s)	383, 1030, 1669, 1750, 2452, 2833, 2891
AflIII	ACRYGT	2 cut(s)	110, 2545
AjnI	CCWGG	5 cut(s)	42, 376, 1530, 1545, 1626
AjuI	GAANNNNNNNTTGG	2 cut(s)	225, 257
Alw21I	GWGCWC	5 cut(s)	440, 850, 1049, 1853, 2331
Alw26I	GTCTC	5 cut(s)	147, 1015, 1689, 1976, 2750
Alw44I	GTGCAC	3 cut(s)	436, 846, 2327
AlwI	GGATC	3 cut(s)	1140, 1395, 2778
AoxI	GGCC	7 cut(s)	7, 62, 356, 430, 1068, 1740, 2868
ApaLI	GTGCAC	3 cut(s)	436, 846, 2327
ApeKI	GCWGC	6 cut(s)	211, 1175, 1356, 2432, 2464, 2786
ApoI	RAATTY	7 cut(s)	1298, 1872, 1913, 2024, 2162, 2381, 2942
AseI	ATTAAT	1 cut(s)	2040
Asp700I	GAANNNNTTC	2 cut(s)	1701, 1914
AspLEI	GCGC	3 cut(s)	97, 211, 2809
AspS9I	GGNCC	6 cut(s)	46, 200, 356, 430, 1068, 1741
AsuC2I	CCSGG	1 cut(s)	2765
AsuHPI	GGTGA	8 cut(s)	115, 344, 770, 1005, 1108, 1154, 1946, 2227
AsuII	TTCGAA	1 cut(s)	2495
AvaII	GGWCC	2 cut(s)	46, 200
AxyI	CCTNAGG	1 cut(s)	1092
BaeGI	GKGCMC	3 cut(s)	440, 850, 2331
BanII	GRGCYC	1 cut(s)	1853
BauI	CACGAG	2 cut(s)	14, 849
BbrPI	CACGTG	1 cut(s)	1181
BbsI	GAAGAC	2 cut(s)	320, 1428
Bbv12I	GWGCWC	5 cut(s)	440, 850, 1049, 1853, 2331
BbvI	GCAGC	6 cut(s)	223, 1162, 1368, 2419, 2476, 2773
BccI	CCATC	9 cut(s)	563, 731, 1296, 1660, 2257, 2339, 2371, 2408, 3001
BceAI	ACGGC	1 cut(s)	49
BcgI	CGANNNNNNTGC	2 cut(s)	482, 516
BciT130I	CCWGG	5 cut(s)	44, 378, 1532, 1547, 1628
BciVI	GTATCC	1 cut(s)	2806
BclI	TGATCA	2 cut(s)	768, 1252
BcnI	CCSGG	1 cut(s)	2765
BcoDI	GTCTC	5 cut(s)	147, 1015, 1689, 1976, 2750
BfaI	CTAG	7 cut(s)	519, 699, 834, 954, 1280, 1919, 2034
BfmI	CTRYAG	4 cut(s)	528, 1005, 2462, 2628
BfuI	GTATCC	1 cut(s)	2806
BglII	AGATCT	2 cut(s)	220, 1633
BisI	GCNGC	7 cut(s)	212, 1176, 1357, 2433, 2446, 2465, 2787
BlsI	GCNGC	7 cut(s)	213, 1177, 1358, 2434, 2447, 2466, 2788
BmcAI	AGTACT	2 cut(s)	2066, 2479
Bme1390I	CCNGG	6 cut(s)	44, 378, 1532, 1547, 1628, 2765
Bme18I	GGWCC	2 cut(s)	46, 200
BmgT120I	GGNCC	6 cut(s)	46, 200, 356, 430, 1068, 1741
BmiI	GGNNCC	2 cut(s)	525, 1654
BmrFI	CCNGG	6 cut(s)	44, 378, 1532, 1547, 1628, 2765
BmsI	GCATC	9 cut(s)	47, 925, 1790, 2188, 2260, 2350, 2395, 2653, 2798
BpiI	GAAGAC	2 cut(s)	320, 1428
BpmI	CTGGAG	7 cut(s)	399, 405, 620, 735, 879, 1529, 1553
Bpu10I	CCTNAGC	2 cut(s)	1043, 2409
Bpu14I	TTCGAA	1 cut(s)	2495
BpuEI	CTTGAG	3 cut(s)	446, 2055, 2774
BpuMI	CCSGG	1 cut(s)	2765
Bsa29I	ATCGAT	1 cut(s)	168
BsaAI	YACGTR	1 cut(s)	1181
BsaHI	GRCGYC	1 cut(s)	33
BsaI	GGTCTC	1 cut(s)	1976
BsaJI	CCNNGG	2 cut(s)	395, 2889
BsaXI	ACNNNNNCTCC	4 cut(s)	372, 402, 573, 603
Bsc4I	CCNNNNNNNGG	7 cut(s)	383, 1030, 1669, 1750, 2452, 2833, 2891
Bse1I	ACTGG	6 cut(s)	307, 433, 624, 1743, 2507, 2827
Bse21I	CCTNAGG	1 cut(s)	1092
Bse3DI	GCAATG	3 cut(s)	150, 2440, 2474
BseBI	CCWGG	5 cut(s)	44, 378, 1532, 1547, 1628
BseCI	ATCGAT	1 cut(s)	168
BseDI	CCNNGG	2 cut(s)	395, 2889
BseGI	GGATG	9 cut(s)	574, 1873, 2275, 2329, 2350, 2382, 2419, 2668, 2695
BseLI	CCNNNNNNNGG	7 cut(s)	383, 1030, 1669, 1750, 2452, 2833, 2891
BseMI	GCAATG	3 cut(s)	150, 2440, 2474
BseMII	CTCAG	9 cut(s)	158, 822, 1034, 1083, 1365, 1464, 1583, 1955, 2052
BseNI	ACTGG	6 cut(s)	307, 433, 624, 1743, 2507, 2827
BseRI	GAGGAG	6 cut(s)	497, 548, 617, 776, 1319, 2195
BseSI	GKGCMC	3 cut(s)	440, 850, 2331
BseX3I	CGGCCG	1 cut(s)	7
BseXI	GCAGC	6 cut(s)	223, 1162, 1368, 2419, 2476, 2773
BsgI	GTGCAG	2 cut(s)	262, 1161
Bsh1236I	CGCG	3 cut(s)	95, 966, 2809
Bsh1285I	CGRYCG	1 cut(s)	10
BshFI	GGCC	7 cut(s)	9, 64, 358, 432, 1070, 1742, 2870
BshVI	ATCGAT	1 cut(s)	168
BsiEI	CGRYCG	1 cut(s)	10
BsiHKAI	GWGCWC	5 cut(s)	440, 850, 1049, 1853, 2331
BsiSI	CCGG	2 cut(s)	6, 2764
BslI	CCNNNNNNNGG	7 cut(s)	383, 1030, 1669, 1750, 2452, 2833, 2891
BsmAI	GTCTC	5 cut(s)	147, 1015, 1689, 1976, 2750
BsmI	GAATGC	2 cut(s)	341, 2581
BsnI	GGCC	7 cut(s)	9, 64, 358, 432, 1070, 1742, 2870
Bso31I	GGTCTC	1 cut(s)	1976
Bsp119I	TTCGAA	1 cut(s)	2495
Bsp1286I	GDGCHC	5 cut(s)	440, 850, 1049, 1853, 2331
Bsp68I	TCGCGA	1 cut(s)	966
BspACI	CCGC	8 cut(s)	85, 155, 777, 1213, 1754, 2446, 2701, 2809
BspANI	GGCC	7 cut(s)	9, 64, 358, 432, 1070, 1742, 2870
BspCNI	CTCAG	9 cut(s)	157, 821, 1035, 1084, 1366, 1465, 1584, 1956, 2053
BspDI	ATCGAT	1 cut(s)	168
BspFNI	CGCG	3 cut(s)	95, 966, 2809
BspHI	TCATGA	1 cut(s)	1345
BspLI	GGNNCC	2 cut(s)	525, 1654
BspMAI	CTGCAG	3 cut(s)	532, 2466, 2632
BspPI	GGATC	3 cut(s)	1140, 1395, 2778
BspQI	GCTCTTC	1 cut(s)	2144
BspT104I	TTCGAA	1 cut(s)	2495
BspTNI	GGTCTC	1 cut(s)	1976
BsrBI	CCGCTC	2 cut(s)	1213, 2701
BsrDI	GCAATG	3 cut(s)	150, 2440, 2474
BsrI	ACTGG	6 cut(s)	307, 433, 624, 1743, 2507, 2827
BssECI	CCNNGG	2 cut(s)	395, 2889
BssNI	GRCGYC	1 cut(s)	33
BssSI	CACGAG	2 cut(s)	14, 849
BssT1I	CCWWGG	1 cut(s)	2889
Bst2BI	CACGAG	2 cut(s)	14, 849
Bst2UI	CCWGG	5 cut(s)	44, 378, 1532, 1547, 1628
Bst4CI	ACNGT	7 cut(s)	449, 516, 1009, 1142, 1341, 2777, 2847
Bst6I	CTCTTC	4 cut(s)	645, 1509, 2144, 2793
BstACI	GRCGYC	1 cut(s)	33
BstBAI	YACGTR	1 cut(s)	1181
BstBI	TTCGAA	1 cut(s)	2495
BstC8I	GCNNGC	9 cut(s)	62, 501, 805, 947, 1513, 1849, 2394, 2784, 3011
BstEII	GGTNACC	1 cut(s)	2233
BstF5I	GGATG	9 cut(s)	574, 1873, 2275, 2329, 2350, 2382, 2419, 2668, 2695
BstFNI	CGCG	3 cut(s)	95, 966, 2809
BstHHI	GCGC	3 cut(s)	97, 211, 2809
BstMAI	GTCTC	5 cut(s)	147, 1015, 1689, 1976, 2750
BstMCI	CGRYCG	1 cut(s)	10
BstMWI	GCNNNNNNNGC	6 cut(s)	547, 854, 1067, 1270, 1493, 2489
BstNI	CCWGG	5 cut(s)	44, 378, 1532, 1547, 1628
BstNSI	RCATGY	4 cut(s)	114, 1515, 2549, 2678
BstPI	GGTNACC	1 cut(s)	2233
BstSCI	CCNGG	6 cut(s)	42, 376, 1530, 1545, 1626, 2763
BstSFI	CTRYAG	4 cut(s)	528, 1005, 2462, 2628
BstSLI	GKGCMC	3 cut(s)	440, 850, 2331
BstUI	CGCG	3 cut(s)	95, 966, 2809
BstV1I	GCAGC	6 cut(s)	223, 1162, 1368, 2419, 2476, 2773
BstV2I	GAAGAC	2 cut(s)	320, 1428
BstX2I	RGATCY	3 cut(s)	220, 1132, 1633
BstXI	CCANNNNNNTGG	1 cut(s)	2923
BstYI	RGATCY	3 cut(s)	220, 1132, 1633
BstZI	CGGCCG	1 cut(s)	7
Bsu15I	ATCGAT	1 cut(s)	168
Bsu36I	CCTNAGG	1 cut(s)	1092
BsuI	GTATCC	1 cut(s)	2806
BsuRI	GGCC	7 cut(s)	9, 64, 358, 432, 1070, 1742, 2870
BsuTUI	ATCGAT	1 cut(s)	168
BtsCI	GGATG	9 cut(s)	574, 1873, 2275, 2329, 2350, 2382, 2419, 2668, 2695
BtsI	GCAGTG	2 cut(s)	669, 1824
BtuMI	TCGCGA	1 cut(s)	966
Cac8I	GCNNGC	9 cut(s)	62, 501, 805, 947, 1513, 1849, 2394, 2784, 3011
CciI	TCATGA	1 cut(s)	1345
CfoI	GCGC	3 cut(s)	97, 211, 2809
Cfr13I	GGNCC	6 cut(s)	46, 200, 356, 430, 1068, 1741
ClaI	ATCGAT	1 cut(s)	168
CseI	GACGC	2 cut(s)	22, 2521
Csp6I	GTAC	7 cut(s)	121, 306, 445, 1216, 2065, 2456, 2478
CviQI	GTAC	7 cut(s)	121, 306, 445, 1216, 2065, 2456, 2478
EaeI	YGGCCR	1 cut(s)	7
EagI	CGGCCG	1 cut(s)	7
Eam1104I	CTCTTC	4 cut(s)	645, 1509, 2144, 2793
EarI	CTCTTC	4 cut(s)	645, 1509, 2144, 2793
Ecl136II	GAGCTC	1 cut(s)	1851
EclXI	CGGCCG	1 cut(s)	7
Eco130I	CCWWGG	1 cut(s)	2889
Eco24I	GRGCYC	1 cut(s)	1853
Eco31I	GGTCTC	1 cut(s)	1976
Eco47I	GGWCC	2 cut(s)	46, 200
Eco52I	CGGCCG	1 cut(s)	7
Eco53kI	GAGCTC	1 cut(s)	1851
Eco57I	CTGAAG	4 cut(s)	1437, 1469, 1688, 2654
Eco72I	CACGTG	1 cut(s)	1181
Eco81I	CCTNAGG	1 cut(s)	1092
Eco91I	GGTNACC	1 cut(s)	2233
EcoICRI	GAGCTC	1 cut(s)	1851
EcoO109I	RGGNCCY	1 cut(s)	46
EcoO65I	GGTNACC	1 cut(s)	2233
EcoRII	CCWGG	5 cut(s)	42, 376, 1530, 1545, 1626
EcoT14I	CCWWGG	1 cut(s)	2889
EcoT38I	GRGCYC	1 cut(s)	1853
ErhI	CCWWGG	1 cut(s)	2889
FalI	AAGNNNNNCTT	4 cut(s)	773, 805, 2303, 2335
FauI	CCCGC	3 cut(s)	148, 2694, 2802
FauNDI	CATATG	1 cut(s)	2962
FbaI	TGATCA	2 cut(s)	768, 1252
Fnu4HI	GCNGC	7 cut(s)	212, 1176, 1357, 2433, 2446, 2465, 2787
FokI	GGATG	9 cut(s)	581, 1880, 2282, 2336, 2357, 2389, 2426, 2675, 2702
FriOI	GRGCYC	1 cut(s)	1853
Fsp4HI	GCNGC	7 cut(s)	212, 1176, 1357, 2433, 2446, 2465, 2787
FspBI	CTAG	7 cut(s)	519, 699, 834, 954, 1280, 1919, 2034
FspI	TGCGCA	1 cut(s)	210
GlaI	GCGC	3 cut(s)	96, 210, 2808
GluI	GCNGC	7 cut(s)	212, 1176, 1357, 2433, 2446, 2465, 2787
GsuI	CTGGAG	7 cut(s)	399, 405, 620, 735, 879, 1529, 1553
HaeIII	GGCC	7 cut(s)	9, 64, 358, 432, 1070, 1742, 2870
HapII	CCGG	2 cut(s)	6, 2764
HgaI	GACGC	2 cut(s)	22, 2521
HhaI	GCGC	3 cut(s)	97, 211, 2809
Hin1I	GRCGYC	1 cut(s)	33
Hin6I	GCGC	3 cut(s)	95, 209, 2807
HinP1I	GCGC	3 cut(s)	95, 209, 2807
HincII	GTYRAC	1 cut(s)	37
HindII	GTYRAC	1 cut(s)	37
HindIII	AAGCTT	4 cut(s)	947, 2087, 2207, 2276
HpaII	CCGG	2 cut(s)	6, 2764
HphI	GGTGA	8 cut(s)	115, 344, 770, 1005, 1108, 1154, 1946, 2227
Hpy166II	GTNNAC	5 cut(s)	37, 438, 848, 878, 2329
Hpy8I	GTNNAC	5 cut(s)	37, 438, 848, 878, 2329
Hpy99I	CGWCG	1 cut(s)	669
HpyCH4III	ACNGT	7 cut(s)	449, 516, 1009, 1142, 1341, 2777, 2847
HpyCH4IV	ACGT	6 cut(s)	39, 664, 1049, 1180, 1382, 2331
HpyF10VI	GCNNNNNNNGC	6 cut(s)	547, 854, 1067, 1270, 1493, 2489
HpySE526I	ACGT	6 cut(s)	39, 664, 1049, 1180, 1382, 2331
Hsp92I	GRCGYC	1 cut(s)	33
HspAI	GCGC	3 cut(s)	95, 209, 2807
Ksp22I	TGATCA	2 cut(s)	768, 1252
LguI	GCTCTTC	1 cut(s)	2144
LmnI	GCTCC	8 cut(s)	87, 380, 763, 913, 1210, 2182, 2698, 2983
Lsp1109I	GCAGC	6 cut(s)	223, 1162, 1368, 2419, 2476, 2773
LweI	GCATC	9 cut(s)	47, 925, 1790, 2188, 2260, 2350, 2395, 2653, 2798
MaeI	CTAG	7 cut(s)	519, 699, 834, 954, 1280, 1919, 2034
MaeII	ACGT	6 cut(s)	39, 664, 1049, 1180, 1382, 2331
MbiI	CCGCTC	2 cut(s)	1213, 2701
MfeI	CAATTG	1 cut(s)	2301
MflI	RGATCY	3 cut(s)	220, 1132, 1633
MhlI	GDGCHC	5 cut(s)	440, 850, 1049, 1853, 2331
MlyI	GAGTC	4 cut(s)	591, 1495, 2513, 2912
MmeI	TCCRAC	3 cut(s)	1032, 1365, 2909
MroXI	GAANNNNTTC	2 cut(s)	1701, 1914
MseI	TTAA	4 cut(s)	738, 1158, 2040, 2142
MslI	CAYNNNNRTG	2 cut(s)	2604, 2921
MspA1I	CMGCKG	1 cut(s)	1019
MspI	CCGG	2 cut(s)	6, 2764
MspR9I	CCNGG	6 cut(s)	44, 378, 1532, 1547, 1628, 2765
MunI	CAATTG	1 cut(s)	2301
Mva1269I	GAATGC	2 cut(s)	341, 2581
MvaI	CCWGG	5 cut(s)	44, 378, 1532, 1547, 1628
MvnI	CGCG	3 cut(s)	95, 966, 2809
MwoI	GCNNNNNNNGC	6 cut(s)	547, 854, 1067, 1270, 1493, 2489
NciI	CCSGG	1 cut(s)	2765
NdeI	CATATG	1 cut(s)	2962
NlaIV	GGNNCC	2 cut(s)	525, 1654
NmuCI	GTSAC	7 cut(s)	11, 71, 613, 705, 2122, 2233, 2904
NruI	TCGCGA	1 cut(s)	966
NsbI	TGCGCA	1 cut(s)	210
NspI	RCATGY	4 cut(s)	114, 1515, 2549, 2678
NspV	TTCGAA	1 cut(s)	2495
PaeI	GCATGC	1 cut(s)	1515
PagI	TCATGA	1 cut(s)	1345
PciI	ACATGT	2 cut(s)	110, 2545
PciSI	GCTCTTC	1 cut(s)	2144
PctI	GAATGC	2 cut(s)	341, 2581
PdmI	GAANNNNTTC	2 cut(s)	1701, 1914
PflFI	GACNNNGTC	1 cut(s)	1341
PflMI	CCANNNNNTGG	3 cut(s)	1030, 1669, 2833
PfoI	TCCNGGA	3 cut(s)	376, 1545, 2763
PkrI	GCNGC	7 cut(s)	213, 1177, 1358, 2434, 2447, 2466, 2788
PleI	GAGTC	4 cut(s)	590, 1495, 2513, 2911
PmaCI	CACGTG	1 cut(s)	1181
PmlI	CACGTG	1 cut(s)	1181
PpsI	GAGTC	4 cut(s)	590, 1495, 2513, 2911
Ppu21I	YACGTR	1 cut(s)	1181
PpuMI	RGGWCCY	1 cut(s)	46
PscI	ACATGT	2 cut(s)	110, 2545
PshBI	ATTAAT	1 cut(s)	2040
Psp124BI	GAGCTC	1 cut(s)	1853
Psp1406I	AACGTT	1 cut(s)	1382
Psp5II	RGGWCCY	1 cut(s)	46
Psp6I	CCWGG	5 cut(s)	42, 376, 1530, 1545, 1626
PspCI	CACGTG	1 cut(s)	1181
PspEI	GGTNACC	1 cut(s)	2233
PspGI	CCWGG	5 cut(s)	42, 376, 1530, 1545, 1626
PspN4I	GGNNCC	2 cut(s)	525, 1654
PspPI	GGNCC	6 cut(s)	46, 200, 356, 430, 1068, 1741
PspPPI	RGGWCCY	1 cut(s)	46
PstI	CTGCAG	3 cut(s)	532, 2466, 2632
PsuI	RGATCY	3 cut(s)	220, 1132, 1633
PsyI	GACNNNGTC	1 cut(s)	1341
PvuII	CAGCTG	1 cut(s)	1019
RruI	TCGCGA	1 cut(s)	966
RsaI	GTAC	7 cut(s)	122, 307, 446, 1217, 2066, 2457, 2479
RsaNI	GTAC	7 cut(s)	121, 306, 445, 1216, 2065, 2456, 2478
RseI	CAYNNNNRTG	2 cut(s)	2604, 2921
SacI	GAGCTC	1 cut(s)	1853
SapI	GCTCTTC	1 cut(s)	2144
SaqAI	TTAA	4 cut(s)	738, 1158, 2040, 2142
SatI	GCNGC	7 cut(s)	212, 1176, 1357, 2433, 2446, 2465, 2787
Sau96I	GGNCC	6 cut(s)	46, 200, 356, 430, 1068, 1741
ScaI	AGTACT	2 cut(s)	2066, 2479
SchI	GAGTC	4 cut(s)	591, 1495, 2513, 2912
ScrFI	CCNGG	6 cut(s)	44, 378, 1532, 1547, 1628, 2765
SduI	GDGCHC	5 cut(s)	440, 850, 1049, 1853, 2331
SfaNI	GCATC	9 cut(s)	47, 925, 1790, 2188, 2260, 2350, 2395, 2653, 2798
SfcI	CTRYAG	4 cut(s)	528, 1005, 2462, 2628
SfuI	TTCGAA	1 cut(s)	2495
SinI	GGWCC	2 cut(s)	46, 200
SmiMI	CAYNNNNRTG	2 cut(s)	2604, 2921
SmlI	CTYRAG	3 cut(s)	425, 2070, 2753
SmoI	CTYRAG	3 cut(s)	425, 2070, 2753
SphI	GCATGC	1 cut(s)	1515
SsiI	CCGC	8 cut(s)	85, 155, 777, 1213, 1754, 2446, 2701, 2809
SspI	AATATT	1 cut(s)	1460
SspMI	CTAG	7 cut(s)	519, 699, 834, 954, 1280, 1919, 2034
SstI	GAGCTC	1 cut(s)	1853
StyD4I	CCNGG	6 cut(s)	42, 376, 1530, 1545, 1626, 2763
StyI	CCWWGG	1 cut(s)	2889
TaaI	ACNGT	7 cut(s)	449, 516, 1009, 1142, 1341, 2777, 2847
TaiI	ACGT	6 cut(s)	42, 667, 1052, 1183, 1385, 2334
TaqI	TCGA	8 cut(s)	55, 168, 186, 1336, 1787, 1946, 2495, 2901
TaqII	GACCGA	1 cut(s)	693
TatI	WGTACW	3 cut(s)	444, 2064, 2477
TauI	GCSGC	1 cut(s)	2448
Tru1I	TTAA	4 cut(s)	738, 1158, 2040, 2142
Tru9I	TTAA	4 cut(s)	738, 1158, 2040, 2142
TseFI	GTSAC	7 cut(s)	11, 71, 613, 705, 2122, 2233, 2904
TseI	GCWGC	6 cut(s)	211, 1175, 1356, 2432, 2464, 2786
Tsp45I	GTSAC	7 cut(s)	11, 71, 613, 705, 2122, 2233, 2904
Tth111I	GACNNNGTC	1 cut(s)	1341
Van91I	CCANNNNNTGG	3 cut(s)	1030, 1669, 2833
VneI	GTGCAC	3 cut(s)	436, 846, 2327
VpaK11BI	GGWCC	2 cut(s)	46, 200
VspI	ATTAAT	1 cut(s)	2040
XapI	RAATTY	7 cut(s)	1298, 1872, 1913, 2024, 2162, 2381, 2942
XbaI	TCTAGA	1 cut(s)	1918
XceI	RCATGY	4 cut(s)	114, 1515, 2549, 2678
XmnI	GAANNNNTTC	2 cut(s)	1701, 1914
XspI	CTAG	7 cut(s)	519, 699, 834, 954, 1280, 1919, 2034
ZrmI	AGTACT	2 cut(s)	2066, 2479

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.