Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004915

Physical Location & Seq

Genomic Coordinates Reverse (-)

9946794 .. 9948872

Gene Structure 2079 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17074

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGATGATGATAGGTTCCATCTTACCCTTACCAGCTCCTCCTGCAAAATCAGTTGCCACGCATACCAAGGCTATTGGTATCATACCTCCTCCTCCAGGAATCAAAGTCGTCATTGATAAAACTGCTCAGTTCGTGGCAAAGAACGGACCCCAATTTGAACAGGTCATAGCTAAGAATCTAGACATAGCAAAATCAAATCTAAGCTTTTTGATTTCCTCAAATCCCTACAATGCATATTATAAGCTCCGGGTGTCTGAATTCCTTGCCCAGCCTGATCAGTCTTATGAAAAGCTAGCGAGAGTTGTAGATGTTGAAGATGGAGCACCAAAACCTGATTCTCCCTCCCAGCTTAGACCTGAATGCAAAGTGCCTGAACCATCAGAACCCGAAGAGTTTACTGTTCGGCTTCCTGAAGGAATTTGTGGAGAAGAACTAGATGTTATTAAACTCACAGCCCAGTTTGTAGCTCGGAATGGGAAATCGTTTTTGACAGGATTGAGAAGCAGAGAGATGAACAACCCCCTGTTCTATTTTCTCAGGCCTAATCATAGCATGTTCAACTTTTTCACTTCTCTGGCAGATGCATATTCAAAGGTGTTGATGCCACCAGAAGGATTGACAGGGAAGCTCAAGAAGAGCGTGGCAGACATGTCTACTGTGCTAGAACGGTGTGTGCATCGGCTGGAGTGGGAGGCTTATCAAAAGAAGGCAAAGCAGAAGGCCGAAGATGAGATTGAGCAGGAAAGGTTACAAATGGCTGCAATTGATTGGCACGATAATGTCTTGGTCGAAGTCATAGACTTTGATGATGTTGAGGATGACTGTTTACCTCCTCCACTGAGCATCGAAGAGGTTATAAGGGGAAGCAAAGTTGTTATGGAAGCAGATGATAATGTCGAAATGGATATGGATGAAGAAGAGATGCAACTTGTTGAAGATGGAAAGAGGGTAACAGAGGTGGCCGATCCAGAACAACCACCAATGAGAATTGTGAAGAACTGGAAGAGACCTGAGGAGAGGATGATCCAATCCAGTGTTGAAAGGGACATGACGATTTCCCCTATTACTGGGGAGCTTGTCCCTAAGAATGAGATGTCTGAGCACATGAAGATTTCCCTCATTGATCCAAGATACAGAGAACAGAAAGAAAGGATGTTTGCTAAGATTCGGGAGACTAGTCTTGTTCTTGCACAGGAAGATGAGATCTCAAGAAACATAGTGAACCTTGCGCGAACTCGTCCTGATATTTTTGGTTCCACTGAGGAGGAAGTTTCTAATGCTGTCAAGGCTGAGATTCAAAATCAAGCGATATCACAGAGTATCAATGGAGAGGATAAGAATGATGCTGTGAACAATGAGCGAAGGAACTTTCCTGGTCCAGCAAGGCCTGACATGCCTTCAGTTCGACCTCAACCTCCACCAACTGGCTTTCTTCCTCGTGTTCCTCTAAGCACGGTTCATTGTTCAGCTCCTAATAGCATTGGCCTCCCAATACCTCCTCTAGTTGTCCAATTTCCATCGGTTGGAGCTCCTCTGCTACCTCCATCAATATTTACGACTGCAACTAATATTCCTACACCATCTCCACCTGTAGCTCAGTTTACACCTATGCAAGTTCCCCAAAGGCATTATATTCCTCCACCTTCAGTGCATATGATGCCCCTGCCTCCACCACCACCTTTACCTCAAGAAATGCATCTACCACCACCACCACCACCTCCAGTTGCAGAGGAGGAACCCAAGCCAAAGCGACAGAAGCTCGATGATTCAATGCTTATTCCAGAAGATAAATTTATGGCACAGCATCCGGGACCAGTTGACATGAATGTATCTGTTCCTATTGTTGATGAAGGTAACCTCAAAGGCCAACTTCTACAGATCACGGTGCAGTCTTTATCTGAAACTGTTGGCAGTCTGAAAGAGAAAATTTCTGCAGAAATCCAACTTCCGGCAAACAAACAGAAATTGAGTGGAAAATCAGGCTTTCTCAAGGACAATTTTTCACTTGCATATTACAATGTTGGCGCAGGACAAACACTCGCTCTTTCAATAAGAGAGCGCGGTGGAAGGAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

692

Amino Acids

77.1

Weight (kDa)

5.28

Isoelectric Point (pI)

56.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	37 - 87	2.4e-14	Surp module
Surp	PF01805	145 - 196	4.8e-17	Surp module
PRP21_like_P	PF12230	215 - 411	1.7e-46	Pre-mRNA splicing factor PRP21 like protein
ubiquitin	PF00240	631 - 687	3.9e-08	Ubiquitin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06890
malus_domestica	MD10G1329400.v1.1
pyrus_communis	pycom05g32220 pycom10g27920
rosa_chinensis	RchiOBHm_Chr7g0191091
rosa_laevigata	RLG00000004475
rosa_multiflora	Rmu_sc0005151.1_g000002 Rmu_sc0005657.1_g000002 Rmu_sc0005903.1_g000003 Rmu_sc0005903.1_g000004 Rmu_sc0005903.1_g000005 Rmu_sc0013941.1_g000002 Rmu_sc0034959.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264050 Rroxscaffold_5G00351920
rosa_rugosa	Rorug01G0317000 Rorug01G0317100
rosa_samantha	Rh1AG145900 Rh1AG325300 Rh3BG312100 Rh4AG053700 Rh4BG051600 Rh4DG247700 Rh7AG116000 Rh7BG117500 Rh7CG120900 Rh7DG298100
rosa_wichuraiana	Rw1G028860 Rw7G010070 Rw7G010160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	240, 857
AccB7I	CCANNNNNTGG	2 cut(s)	1424, 1523
AccI	GTMKAC	1 cut(s)	653
AccII	CGCG	2 cut(s)	1231, 2061
AciI	CCGC	1 cut(s)	2061
AclWI	GGATC	3 cut(s)	959, 1018, 1118
AcoI	YGGCCR	1 cut(s)	960
AcsI	RAATTY	4 cut(s)	257, 417, 1790, 1926
AcuI	CTGAAG	3 cut(s)	432, 1383, 1629
AfiI	CCNNNNNNNGG	6 cut(s)	95, 611, 1067, 1424, 1523, 1948
AflIII	ACRYGT	1 cut(s)	648
AgsI	TTSAA	9 cut(s)	158, 314, 559, 591, 935, 1040, 1298, 1770, 2049
AhlI	ACTAGT	1 cut(s)	1175
AjnI	CCWGG	2 cut(s)	94, 1372
AjuI	GAANNNNNNNTTGG	2 cut(s)	319, 351
Alw21I	GWGCWC	3 cut(s)	325, 1104, 1531
Alw26I	GTCTC	2 cut(s)	1000, 1166
AlwI	GGATC	3 cut(s)	959, 1018, 1118
AoxI	GGCC	6 cut(s)	539, 720, 960, 1385, 1483, 1864
ApeKI	GCWGC	1 cut(s)	758
ApoI	RAATTY	4 cut(s)	257, 417, 1790, 1926
AspLEI	GCGC	3 cut(s)	1231, 2027, 2061
AspS9I	GGNCC	3 cut(s)	146, 1376, 1811
AsuC2I	CCSGG	2 cut(s)	248, 1809
AsuNHI	GCTAGC	1 cut(s)	292
AvaII	GGWCC	3 cut(s)	146, 1376, 1811
AxyI	CCTNAGG	1 cut(s)	1011
BanII	GRGCYC	1 cut(s)	1531
BauI	CACGAG	1 cut(s)	1437
Bbv12I	GWGCWC	3 cut(s)	325, 1104, 1531
BbvI	GCAGC	1 cut(s)	745
BccI	CCATC	7 cut(s)	26, 311, 385, 932, 1525, 1552, 1588
BciT130I	CCWGG	2 cut(s)	96, 1374
BclI	TGATCA	1 cut(s)	274
BcnI	CCSGG	2 cut(s)	248, 1809
BcoDI	GTCTC	2 cut(s)	1000, 1166
BcuI	ACTAGT	1 cut(s)	1175
BfaI	CTAG	6 cut(s)	179, 293, 434, 662, 1176, 1502
BfmI	CTRYAG	3 cut(s)	1590, 1874, 1932
BglII	AGATCT	1 cut(s)	1203
BisI	GCNGC	1 cut(s)	759
BlsI	GCNGC	1 cut(s)	760
Bme1390I	CCNGG	4 cut(s)	96, 248, 1374, 1809
Bme18I	GGWCC	3 cut(s)	146, 1376, 1811
BmgT120I	GGNCC	3 cut(s)	146, 1376, 1811
BmiI	GGNNCC	5 cut(s)	16, 148, 1255, 1737, 1812
BmrFI	CCNGG	4 cut(s)	96, 248, 1374, 1809
BmrI	ACTGGG	2 cut(s)	451, 1077
BmsI	GCATC	9 cut(s)	571, 591, 685, 852, 912, 1333, 1647, 1705, 1813
BmtI	GCTAGC	1 cut(s)	296
BmuI	ACTGGG	2 cut(s)	451, 1077
BpmI	CTGGAG	3 cut(s)	78, 704, 1704
BpuEI	CTTGAG	4 cut(s)	614, 1192, 1671, 1973
BpuMI	CCSGG	2 cut(s)	248, 1809
BsaI	GGTCTC	1 cut(s)	1000
BsaJI	CCNNGG	1 cut(s)	66
BsaXI	ACNNNNNCTCC	2 cut(s)	1567, 1597
Bsc4I	CCNNNNNNNGG	6 cut(s)	95, 611, 1067, 1424, 1523, 1948
Bse1I	ACTGG	7 cut(s)	457, 1004, 1032, 1072, 1429, 1721, 1814
Bse21I	CCTNAGG	1 cut(s)	1011
BseBI	CCWGG	2 cut(s)	96, 1374
BseDI	CCNNGG	1 cut(s)	66
BseGI	GGATG	5 cut(s)	823, 916, 1026, 1158, 1804
BseLI	CCNNNNNNNGG	6 cut(s)	95, 611, 1067, 1424, 1523, 1948
BseMII	CTCAG	8 cut(s)	140, 550, 830, 1002, 1089, 1251, 1281, 1610
BseNI	ACTGG	7 cut(s)	457, 1004, 1032, 1072, 1429, 1721, 1814
BseRI	GAGGAG	9 cut(s)	27, 78, 81, 822, 1028, 1277, 1488, 1521, 1745
BseXI	GCAGC	1 cut(s)	745
BseYI	CCCAGC	2 cut(s)	267, 345
BsgI	GTGCAG	1 cut(s)	1907
Bsh1236I	CGCG	2 cut(s)	1231, 2061
BshFI	GGCC	6 cut(s)	541, 722, 962, 1387, 1485, 1866
BsiHKAI	GWGCWC	3 cut(s)	325, 1104, 1531
BsiSI	CCGG	3 cut(s)	247, 1808, 1949
BslFI	GGGAC	3 cut(s)	1058, 1064, 1824
BslI	CCNNNNNNNGG	6 cut(s)	95, 611, 1067, 1424, 1523, 1948
BsmAI	GTCTC	2 cut(s)	1000, 1166
BsmFI	GGGAC	3 cut(s)	1058, 1064, 1824
BsmI	GAATGC	1 cut(s)	365
BsnI	GGCC	6 cut(s)	541, 722, 962, 1387, 1485, 1866
Bso31I	GGTCTC	1 cut(s)	1000
Bsp1286I	GDGCHC	3 cut(s)	325, 1104, 1531
Bsp143I	GATC	6 cut(s)	274, 964, 1023, 1123, 1203, 1878
BspACI	CCGC	1 cut(s)	2061
BspANI	GGCC	6 cut(s)	541, 722, 962, 1387, 1485, 1866
BspCNI	CTCAG	8 cut(s)	139, 549, 831, 1003, 1090, 1252, 1282, 1609
BspFNI	CGCG	2 cut(s)	1231, 2061
BspLI	GGNNCC	5 cut(s)	16, 148, 1255, 1737, 1812
BspMAI	CTGCAG	1 cut(s)	1936
BspOI	GCTAGC	1 cut(s)	296
BspPI	GGATC	3 cut(s)	959, 1018, 1118
BspQI	GCTCTTC	1 cut(s)	629
BspTNI	GGTCTC	1 cut(s)	1000
BsrI	ACTGG	7 cut(s)	457, 1004, 1032, 1072, 1429, 1721, 1814
BssECI	CCNNGG	1 cut(s)	66
BssMI	GATC	6 cut(s)	274, 964, 1023, 1123, 1203, 1878
BssSI	CACGAG	1 cut(s)	1437
BssT1I	CCWWGG	1 cut(s)	66
Bst2BI	CACGAG	1 cut(s)	1437
Bst2UI	CCWGG	2 cut(s)	96, 1374
Bst4CI	ACNGT	7 cut(s)	400, 658, 669, 824, 1456, 1885, 1906
Bst6I	CTCTTC	6 cut(s)	384, 629, 843, 912, 998, 2066
BstAPI	GCANNNNNTGC	1 cut(s)	1657
BstC8I	GCNNGC	1 cut(s)	294
BstEII	GGTNACC	1 cut(s)	1853
BstENI	CCTNNNNNAGG	1 cut(s)	93
BstF5I	GGATG	5 cut(s)	823, 916, 1026, 1158, 1804
BstFNI	CGCG	2 cut(s)	1231, 2061
BstHHI	GCGC	3 cut(s)	1231, 2027, 2061
BstKTI	GATC	6 cut(s)	277, 967, 1026, 1126, 1206, 1881
BstMAI	GTCTC	2 cut(s)	1000, 1166
BstMBI	GATC	6 cut(s)	274, 964, 1023, 1123, 1203, 1878
BstMWI	GCNNNNNNNGC	5 cut(s)	41, 1286, 1393, 1657, 1756
BstNI	CCWGG	2 cut(s)	96, 1374
BstNSI	RCATGY	3 cut(s)	556, 652, 1396
BstPI	GGTNACC	1 cut(s)	1853
BstSCI	CCNGG	4 cut(s)	94, 246, 1372, 1807
BstSFI	CTRYAG	3 cut(s)	1590, 1874, 1932
BstUI	CGCG	2 cut(s)	1231, 2061
BstV1I	GCAGC	1 cut(s)	745
BstX2I	RGATCY	1 cut(s)	1203
BstYI	RGATCY	1 cut(s)	1203
Bsu36I	CCTNAGG	1 cut(s)	1011
BsuRI	GGCC	6 cut(s)	541, 722, 962, 1387, 1485, 1866
BtsCI	GGATG	5 cut(s)	823, 916, 1026, 1158, 1804
BtsIMutI	CAGTG	4 cut(s)	836, 1039, 1257, 1653
Cac8I	GCNNGC	1 cut(s)	294
CfoI	GCGC	3 cut(s)	1231, 2027, 2061
Cfr13I	GGNCC	3 cut(s)	146, 1376, 1811
CviAII	CATG	6 cut(s)	553, 649, 1048, 1105, 1393, 1822
DpnI	GATC	6 cut(s)	276, 966, 1025, 1125, 1205, 1880
DpnII	GATC	6 cut(s)	274, 964, 1023, 1123, 1203, 1878
EaeI	YGGCCR	1 cut(s)	960
Eam1104I	CTCTTC	6 cut(s)	384, 629, 843, 912, 998, 2066
EarI	CTCTTC	6 cut(s)	384, 629, 843, 912, 998, 2066
Ecl136II	GAGCTC	1 cut(s)	1529
Eco130I	CCWWGG	1 cut(s)	66
Eco147I	AGGCCT	2 cut(s)	541, 1387
Eco24I	GRGCYC	1 cut(s)	1531
Eco31I	GGTCTC	1 cut(s)	1000
Eco32I	GATATC	1 cut(s)	1311
Eco47I	GGWCC	3 cut(s)	146, 1376, 1811
Eco53kI	GAGCTC	1 cut(s)	1529
Eco57I	CTGAAG	3 cut(s)	432, 1383, 1629
Eco81I	CCTNAGG	1 cut(s)	1011
Eco91I	GGTNACC	1 cut(s)	1853
EcoICRI	GAGCTC	1 cut(s)	1529
EcoNI	CCTNNNNNAGG	1 cut(s)	93
EcoO65I	GGTNACC	1 cut(s)	1853
EcoRI	GAATTC	1 cut(s)	257
EcoRII	CCWGG	2 cut(s)	94, 1372
EcoRV	GATATC	1 cut(s)	1311
EcoT14I	CCWWGG	1 cut(s)	66
EcoT22I	ATGCAT	3 cut(s)	235, 586, 1698
EcoT38I	GRGCYC	1 cut(s)	1531
ErhI	CCWWGG	1 cut(s)	66
FaeI	CATG	6 cut(s)	556, 652, 1051, 1108, 1396, 1825
FalI	AAGNNNNNCTT	2 cut(s)	1854, 1886
FaqI	GGGAC	3 cut(s)	1058, 1064, 1824
FatI	CATG	6 cut(s)	552, 648, 1047, 1104, 1392, 1821
FauNDI	CATATG	1 cut(s)	1653
FbaI	TGATCA	1 cut(s)	274
FblI	GTMKAC	1 cut(s)	653
Fnu4HI	GCNGC	1 cut(s)	759
FokI	GGATG	5 cut(s)	830, 923, 1033, 1165, 1791
FriOI	GRGCYC	1 cut(s)	1531
Fsp4HI	GCNGC	1 cut(s)	759
FspBI	CTAG	6 cut(s)	179, 293, 434, 662, 1176, 1502
GlaI	GCGC	3 cut(s)	1230, 2026, 2060
GluI	GCNGC	1 cut(s)	759
GsaI	CCCAGC	2 cut(s)	271, 349
GsuI	CTGGAG	3 cut(s)	78, 704, 1704
HaeIII	GGCC	6 cut(s)	541, 722, 962, 1387, 1485, 1866
HapII	CCGG	3 cut(s)	247, 1808, 1949
HhaI	GCGC	3 cut(s)	1231, 2027, 2061
Hin1II	CATG	6 cut(s)	556, 652, 1051, 1108, 1396, 1825
Hin6I	GCGC	3 cut(s)	1229, 2025, 2059
HinP1I	GCGC	3 cut(s)	1229, 2025, 2059
HincII	GTYRAC	1 cut(s)	1819
HindII	GTYRAC	1 cut(s)	1819
HindIII	AAGCTT	1 cut(s)	202
HinfI	GANTC	6 cut(s)	99, 175, 335, 1165, 1294, 1766
HpaII	CCGG	3 cut(s)	247, 1808, 1949
Hpy166II	GTNNAC	7 cut(s)	396, 654, 827, 1222, 1351, 1602, 1819
Hpy188I	TCNGA	6 cut(s)	256, 382, 471, 1099, 1900, 1917
Hpy188III	TCNNGA	9 cut(s)	179, 410, 631, 968, 1169, 1209, 1241, 1688, 1781
Hpy8I	GTNNAC	7 cut(s)	396, 654, 827, 1222, 1351, 1602, 1819
HpyAV	CCTTC	9 cut(s)	407, 605, 700, 712, 1356, 1407, 1653, 1844, 2061
HpyCH4III	ACNGT	7 cut(s)	400, 658, 669, 824, 1456, 1885, 1906
HpyF10VI	GCNNNNNNNGC	5 cut(s)	41, 1286, 1393, 1657, 1756
Hsp92II	CATG	6 cut(s)	556, 652, 1051, 1108, 1396, 1825
HspAI	GCGC	3 cut(s)	1229, 2025, 2059
Ksp22I	TGATCA	1 cut(s)	274
Kzo9I	GATC	6 cut(s)	274, 964, 1023, 1123, 1203, 1878
LguI	GCTCTTC	1 cut(s)	629
LmnI	GCTCC	7 cut(s)	40, 249, 320, 1072, 1474, 1526, 1534
Lsp1109I	GCAGC	1 cut(s)	745
LweI	GCATC	9 cut(s)	571, 591, 685, 852, 912, 1333, 1647, 1705, 1813
MaeI	CTAG	6 cut(s)	179, 293, 434, 662, 1176, 1502
MaeIII	GTNAC	3 cut(s)	747, 949, 1853
MalI	GATC	6 cut(s)	276, 966, 1025, 1125, 1205, 1880
MboI	GATC	6 cut(s)	274, 964, 1023, 1123, 1203, 1878
MfeI	CAATTG	1 cut(s)	762
MflI	RGATCY	1 cut(s)	1203
MhlI	GDGCHC	3 cut(s)	325, 1104, 1531
MmeI	TCCRAC	2 cut(s)	1504, 1966
Mph1103I	ATGCAT	3 cut(s)	235, 586, 1698
MseI	TTAA	1 cut(s)	444
MslI	CAYNNNNRTG	1 cut(s)	777
MspI	CCGG	3 cut(s)	247, 1808, 1949
MspR9I	CCNGG	4 cut(s)	96, 248, 1374, 1809
MunI	CAATTG	1 cut(s)	762
Mva1269I	GAATGC	1 cut(s)	365
MvaI	CCWGG	2 cut(s)	96, 1374
MvnI	CGCG	2 cut(s)	1231, 2061
MwoI	GCNNNNNNNGC	5 cut(s)	41, 1286, 1393, 1657, 1756
NciI	CCSGG	2 cut(s)	248, 1809
NdeI	CATATG	1 cut(s)	1653
NdeII	GATC	6 cut(s)	274, 964, 1023, 1123, 1203, 1878
NheI	GCTAGC	1 cut(s)	292
NlaIII	CATG	6 cut(s)	556, 652, 1051, 1108, 1396, 1825
NlaIV	GGNNCC	5 cut(s)	16, 148, 1255, 1737, 1812
NsiI	ATGCAT	3 cut(s)	235, 586, 1698
NspI	RCATGY	3 cut(s)	556, 652, 1396
PceI	AGGCCT	2 cut(s)	541, 1387
PciI	ACATGT	1 cut(s)	648
PciSI	GCTCTTC	1 cut(s)	629
PctI	GAATGC	1 cut(s)	365
PfeI	GAWTC	6 cut(s)	99, 175, 335, 1165, 1294, 1766
PflMI	CCANNNNNTGG	2 cut(s)	1424, 1523
PfoI	TCCNGGA	2 cut(s)	94, 1807
PkrI	GCNGC	1 cut(s)	760
PscI	ACATGT	1 cut(s)	648
PsiI	TTATAA	2 cut(s)	240, 857
Psp124BI	GAGCTC	1 cut(s)	1531
Psp6I	CCWGG	2 cut(s)	94, 1372
PspEI	GGTNACC	1 cut(s)	1853
PspFI	CCCAGC	2 cut(s)	267, 345
PspGI	CCWGG	2 cut(s)	94, 1372
PspN4I	GGNNCC	5 cut(s)	16, 148, 1255, 1737, 1812
PspPI	GGNCC	3 cut(s)	146, 1376, 1811
PstI	CTGCAG	1 cut(s)	1936
PsuI	RGATCY	1 cut(s)	1203
RseI	CAYNNNNRTG	1 cut(s)	777
SacI	GAGCTC	1 cut(s)	1531
SapI	GCTCTTC	1 cut(s)	629
SaqAI	TTAA	1 cut(s)	444
SatI	GCNGC	1 cut(s)	759
Sau3AI	GATC	6 cut(s)	274, 964, 1023, 1123, 1203, 1878
Sau96I	GGNCC	3 cut(s)	146, 1376, 1811
ScrFI	CCNGG	4 cut(s)	96, 248, 1374, 1809
SduI	GDGCHC	3 cut(s)	325, 1104, 1531
SfaNI	GCATC	9 cut(s)	571, 591, 685, 852, 912, 1333, 1647, 1705, 1813
SfcI	CTRYAG	3 cut(s)	1590, 1874, 1932
SinI	GGWCC	3 cut(s)	146, 1376, 1811
SmiMI	CAYNNNNRTG	1 cut(s)	777
SmlI	CTYRAG	4 cut(s)	629, 1207, 1686, 1988
SmoI	CTYRAG	4 cut(s)	629, 1207, 1686, 1988
SpeI	ACTAGT	1 cut(s)	1175
SseBI	AGGCCT	2 cut(s)	541, 1387
SsiI	CCGC	1 cut(s)	2061
SspI	AATATT	2 cut(s)	1551, 1570
SspMI	CTAG	6 cut(s)	179, 293, 434, 662, 1176, 1502
SstI	GAGCTC	1 cut(s)	1531
StuI	AGGCCT	2 cut(s)	541, 1387
StyD4I	CCNGG	4 cut(s)	94, 246, 1372, 1807
StyI	CCWWGG	1 cut(s)	66
TaaI	ACNGT	7 cut(s)	400, 658, 669, 824, 1456, 1885, 1906
TaqI	TCGA	5 cut(s)	789, 846, 897, 1405, 1761
TfiI	GAWTC	6 cut(s)	99, 175, 335, 1165, 1294, 1766
Tru1I	TTAA	1 cut(s)	444
Tru9I	TTAA	1 cut(s)	444
TscAI	CASTG	4 cut(s)	843, 1039, 1264, 1653
TseI	GCWGC	1 cut(s)	758
TspDTI	ATGAA	7 cut(s)	300, 527, 927, 1121, 1448, 1838, 1863
TspGWI	ACGGA	1 cut(s)	159
TspRI	CASTG	4 cut(s)	843, 1039, 1264, 1653
Van91I	CCANNNNNTGG	2 cut(s)	1424, 1523
VpaK11BI	GGWCC	3 cut(s)	146, 1376, 1811
XagI	CCTNNNNNAGG	1 cut(s)	93
XapI	RAATTY	4 cut(s)	257, 417, 1790, 1926
XbaI	TCTAGA	1 cut(s)	178
XceI	RCATGY	3 cut(s)	556, 652, 1396
XmiI	GTMKAC	1 cut(s)	653
XspI	CTAG	6 cut(s)	179, 293, 434, 662, 1176, 1502
Zsp2I	ATGCAT	3 cut(s)	235, 586, 1698

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.