Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0004915

Physical Location & Seq

Genomic Coordinates Forward (+)

57823740 .. 57825814

Gene Structure 2075 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00264050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGATGATGATAGGTTCCATCTTACCCTTACTAGCTCCTCCTGCAAAATCAGTTGCCACGCATACCAAGGCAATTGGTATCATACCTCCTCCTCCAGGAATCAAAGTCATCATTGATAAAACTGCTCAGTTCGTGGCAAAGAACGGACCCCAATTTGAACAGGTCATAGCTAAGAATCTAGACATAGCAAAATCAAATCTAAGCTTTTTGATTTCCTCAAATCCCTACAATGCATATTATAAGCGCCGGGTGTCTGAATTCCTTGCCCAGCCTGATCAGTCTTATGAAGAGCCAGCTCCAGTTGTAGATGTTGAAGCTGGAGCACCAAAACCTGATTCTCCCTCCCAGCTTAGACCTGAATGCAAAGTGCCTGAACCATCAGAACCCGAAGAGTTTACTGTTTGGCTTCCTGAAGGAATTTGTGGAGAAGAACTAGATGTTCTTAAACTCACAGCCCAGTTTGTAGCTCGGAATGGGAAATCGTTTTTGACAGGATTGAGAAGCAGAGAGATGAACAACCCGCAGTTCTATTTTCTCAAGCCTAATCATAGCGTGTTCAACTTTTTCACTTCTCTGGCAGATGCATATTCAAAGGTGTTGATGCCACCAGAAGGATTGACAGGGAAGCTCAAGAAGAGCGTGGCAGACATGTCTACTGTGCTAGAACGGTGTTTGCATCGGCTGGAGTGGGAGACTTATCAAAAACAGGCAAAGCAGAAGGCCGAAGATGAGATTGAGCAGGAAAGGTTACAAATGGCTGCAATTGATTGGCACGATAATGTCTTGGTCGAAGTCATAGACTTTGATGATGTTGAGGATGACTATTTACCTCCTCCACTGAGCCTTGAAGAGGTTAGAAGGAGAAGCAAAGTTATTATGGAAGCAGATGCTGATGTCGAAATGGATATGGATGAAGAAGAGATGCAACTTGTTGAAGATGGAAAGAGGGTAACAGAGGTGGATCCAGAACAACCACCAATGAGAATTGTGAAGAACTGGAAGAGACCTGAGGAGAGGATGATCCAATCCAGTGCTGAAAGGGACATGACAATTTCCCCTATTACTGGGGAGCTTGTCCCTAACAATGAGATTCTTGTTCTTGCACAGGACGATGAGATCTCAAGAAACATAGTGAACCTTGCGCGAACCCGTCCTGATATTTTTGGTTCCACGGAGGAGGAAGTTTCAAATGCTGTCAAGGCTGAGATTCAAAATCAAGCGATATCACAGAGTATCAATGGAGAGGATAAGAATGATGCTGTGAACAATGAGCGAAGGAACTTTCCTGGTCCAGCAAGACCTGACATGCCTTCAGTTCGATCTCAACCTCCACCAACTGGCCTTCTTCCTCGTGTTTTTCTAAGCACGGTTCAGTGTTCAGCTCCTAATAGCATTGGCCTCCCAATACCTCCTCCAGTTGTCCAATTTCCATCGGTTGGAGCTCCTCTGCCACCTCCATCAATATTTACGACTGCAACAAATATTCCTGCACCATCTCCACCTGTAGCTCAGTTTACACCAATGCAAGTTCCCCAAAGGCATTATATGCCTCCACCTTCAGTGCATATGATGCCCCTGCCTCCACCACCACCTTTACCTCAAGAAATGCATCTACCACCACCACCACCACCTCCAGTTGCAGAGGAGGAACCCAAGCCAAAGCGACAGAAGCTCGATGATTCAATGCTTATTCCAGAAGATAAATTTCTGGCACAGCATCCGGGACCAGTTGACATGAATGTATCTATTCCTATTGTTGATGAAGGTAACCTCAAAGGTCAACTTCTACAGATCACGGTGCAGTCTTTATCTGAAACTGTTGGCAGTCTGAAAGAGAAAATTTCTGCAGAAATCCAACTTCCGGCAAACAAACAGAAACTGAGTGGAAAATCAGGCTTTCTCAAGGACAATTTTTCACTTGCATATTACAATGTTGGCGCAGGACAAACACTCTCTCTTTCAATAAGAGAGCGCGGTGGAAGGAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

663

Amino Acids

73.59

Weight (kDa)

5.04

Isoelectric Point (pI)

63.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	37 - 87	2.2e-15	Surp module
Surp	PF01805	145 - 196	1.3e-16	Surp module
PRP21_like_P	PF12230	215 - 364	2.6e-29	Pre-mRNA splicing factor PRP21 like protein
ubiquitin	PF00240	602 - 658	2.4e-08	Ubiquitin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06890
malus_domestica	MD10G1329400.v1.1
pyrus_communis	pycom05g32220 pycom10g27920
rosa_chinensis	RchiOBHm_Chr7g0191091
rosa_laevigata	RLG00000004475
rosa_multiflora	Rmu_sc0005151.1_g000002 Rmu_sc0005657.1_g000002 Rmu_sc0005903.1_g000003 Rmu_sc0005903.1_g000004 Rmu_sc0005903.1_g000005 Rmu_sc0013941.1_g000002 Rmu_sc0034959.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264050 Rroxscaffold_5G00351920
rosa_rugosa	Rorug01G0317000 Rorug01G0317100
rosa_samantha	Rh1AG145900 Rh1AG325300 Rh3BG312100 Rh4AG053700 Rh4BG051600 Rh4DG247700 Rh7AG116000 Rh7BG117500 Rh7CG120900 Rh7DG298100
rosa_wichuraiana	Rw1G028860 Rw7G010070 Rw7G010160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	240
AccB7I	CCANNNNNTGG	2 cut(s)	1337, 1436
AccI	GTMKAC	1 cut(s)	653
AccII	CGCG	2 cut(s)	1144, 1974
AciI	CCGC	2 cut(s)	521, 1974
AclWI	GGATC	3 cut(s)	956, 969, 1015
AcsI	RAATTY	4 cut(s)	257, 417, 1703, 1839
AcuI	CTGAAG	3 cut(s)	432, 1296, 1542
AfiI	CCNNNNNNNGG	7 cut(s)	95, 611, 850, 1064, 1337, 1436, 1861
AflIII	ACRYGT	1 cut(s)	648
AjnI	CCWGG	2 cut(s)	94, 1285
AjuI	GAANNNNNNNTTGG	2 cut(s)	319, 351
Alw21I	GWGCWC	2 cut(s)	325, 1444
Alw26I	GTCTC	2 cut(s)	686, 997
AlwI	GGATC	3 cut(s)	956, 969, 1015
AlwNI	CAGNNNCTG	2 cut(s)	890, 1879
AoxI	GGCC	3 cut(s)	720, 1339, 1396
ApeKI	GCWGC	1 cut(s)	758
ApoI	RAATTY	4 cut(s)	257, 417, 1703, 1839
AspLEI	GCGC	4 cut(s)	246, 1144, 1940, 1974
AspS9I	GGNCC	3 cut(s)	146, 1289, 1724
AsuC2I	CCSGG	2 cut(s)	248, 1722
AvaII	GGWCC	3 cut(s)	146, 1289, 1724
AxyI	CCTNAGG	1 cut(s)	1008
BamHI	GGATCC	1 cut(s)	961
BanII	GRGCYC	1 cut(s)	1444
BauI	CACGAG	1 cut(s)	1350
Bbv12I	GWGCWC	2 cut(s)	325, 1444
BbvI	GCAGC	1 cut(s)	745
BccI	CCATC	6 cut(s)	26, 385, 932, 1438, 1465, 1501
BciT130I	CCWGG	2 cut(s)	96, 1287
BclI	TGATCA	1 cut(s)	274
BcnI	CCSGG	2 cut(s)	248, 1722
BcoDI	GTCTC	2 cut(s)	686, 997
BfaI	CTAG	4 cut(s)	32, 179, 434, 662
BfmI	CTRYAG	3 cut(s)	1503, 1787, 1845
BfoI	RGCGCY	1 cut(s)	247
BglII	AGATCT	1 cut(s)	1116
BisI	GCNGC	1 cut(s)	759
BlsI	GCNGC	1 cut(s)	760
Bme1390I	CCNGG	4 cut(s)	96, 248, 1287, 1722
Bme18I	GGWCC	3 cut(s)	146, 1289, 1724
BmgT120I	GGNCC	3 cut(s)	146, 1289, 1724
BmiI	GGNNCC	6 cut(s)	16, 148, 963, 1168, 1650, 1725
BmrFI	CCNGG	4 cut(s)	96, 248, 1287, 1722
BmrI	ACTGGG	2 cut(s)	451, 1074
BmsI	GCATC	9 cut(s)	571, 591, 685, 877, 912, 1246, 1560, 1618, 1726
BmuI	ACTGGG	2 cut(s)	451, 1074
BpmI	CTGGAG	6 cut(s)	78, 282, 339, 704, 1398, 1617
BpuEI	CTTGAG	5 cut(s)	521, 614, 1105, 1584, 1886
BpuMI	CCSGG	2 cut(s)	248, 1722
BsaI	GGTCTC	1 cut(s)	997
BsaJI	CCNNGG	2 cut(s)	66, 1170
Bsc4I	CCNNNNNNNGG	7 cut(s)	95, 611, 850, 1064, 1337, 1436, 1861
Bse1I	ACTGG	9 cut(s)	299, 457, 1001, 1029, 1069, 1342, 1415, 1634, 1727
Bse21I	CCTNAGG	1 cut(s)	1008
BseBI	CCWGG	2 cut(s)	96, 1287
BseDI	CCNNGG	2 cut(s)	66, 1170
BseGI	GGATG	4 cut(s)	823, 916, 1023, 1717
BseLI	CCNNNNNNNGG	7 cut(s)	95, 611, 850, 1064, 1337, 1436, 1861
BseMII	CTCAG	6 cut(s)	140, 830, 999, 1194, 1523, 1871
BseNI	ACTGG	9 cut(s)	299, 457, 1001, 1029, 1069, 1342, 1415, 1634, 1727
BseRI	GAGGAG	9 cut(s)	27, 78, 81, 822, 1025, 1190, 1401, 1434, 1658
BseXI	GCAGC	1 cut(s)	745
BseYI	CCCAGC	2 cut(s)	267, 345
BsgI	GTGCAG	2 cut(s)	1473, 1820
Bsh1236I	CGCG	2 cut(s)	1144, 1974
BshFI	GGCC	3 cut(s)	722, 1341, 1398
BsiHKAI	GWGCWC	2 cut(s)	325, 1444
BsiSI	CCGG	3 cut(s)	247, 1721, 1862
BslFI	GGGAC	3 cut(s)	1055, 1061, 1737
BslI	CCNNNNNNNGG	7 cut(s)	95, 611, 850, 1064, 1337, 1436, 1861
BsmAI	GTCTC	2 cut(s)	686, 997
BsmFI	GGGAC	3 cut(s)	1055, 1061, 1737
BsmI	GAATGC	1 cut(s)	365
BsnI	GGCC	3 cut(s)	722, 1341, 1398
Bso31I	GGTCTC	1 cut(s)	997
Bsp1286I	GDGCHC	2 cut(s)	325, 1444
Bsp143I	GATC	6 cut(s)	274, 961, 1020, 1116, 1319, 1791
BspACI	CCGC	2 cut(s)	521, 1974
BspANI	GGCC	3 cut(s)	722, 1341, 1398
BspCNI	CTCAG	6 cut(s)	139, 831, 1000, 1195, 1522, 1872
BspFNI	CGCG	2 cut(s)	1144, 1974
BspLI	GGNNCC	6 cut(s)	16, 148, 963, 1168, 1650, 1725
BspMAI	CTGCAG	1 cut(s)	1849
BspPI	GGATC	3 cut(s)	956, 969, 1015
BspQI	GCTCTTC	2 cut(s)	282, 629
BspTNI	GGTCTC	1 cut(s)	997
BsrI	ACTGG	9 cut(s)	299, 457, 1001, 1029, 1069, 1342, 1415, 1634, 1727
BssECI	CCNNGG	2 cut(s)	66, 1170
BssMI	GATC	6 cut(s)	274, 961, 1020, 1116, 1319, 1791
BssSI	CACGAG	1 cut(s)	1350
BssT1I	CCWWGG	1 cut(s)	66
Bst2BI	CACGAG	1 cut(s)	1350
Bst2UI	CCWGG	2 cut(s)	96, 1287
Bst4CI	ACNGT	6 cut(s)	400, 658, 669, 1369, 1798, 1819
Bst6I	CTCTTC	6 cut(s)	282, 384, 629, 843, 912, 995
BstAPI	GCANNNNNTGC	2 cut(s)	1546, 1570
BstC8I	GCNNGC	1 cut(s)	294
BstDSI	CCRYGG	1 cut(s)	1170
BstEII	GGTNACC	1 cut(s)	1766
BstENI	CCTNNNNNAGG	2 cut(s)	93, 848
BstF5I	GGATG	4 cut(s)	823, 916, 1023, 1717
BstFNI	CGCG	2 cut(s)	1144, 1974
BstH2I	RGCGCY	1 cut(s)	247
BstHHI	GCGC	4 cut(s)	246, 1144, 1940, 1974
BstKTI	GATC	6 cut(s)	277, 964, 1023, 1119, 1322, 1794
BstMAI	GTCTC	2 cut(s)	686, 997
BstMBI	GATC	6 cut(s)	274, 961, 1020, 1116, 1319, 1791
BstMWI	GCNNNNNNNGC	5 cut(s)	41, 1199, 1546, 1570, 1669
BstNI	CCWGG	2 cut(s)	96, 1287
BstNSI	RCATGY	2 cut(s)	652, 1309
BstPI	GGTNACC	1 cut(s)	1766
BstSCI	CCNGG	4 cut(s)	94, 246, 1285, 1720
BstSFI	CTRYAG	3 cut(s)	1503, 1787, 1845
BstUI	CGCG	2 cut(s)	1144, 1974
BstV1I	GCAGC	1 cut(s)	745
BstX2I	RGATCY	2 cut(s)	961, 1116
BstYI	RGATCY	2 cut(s)	961, 1116
Bsu36I	CCTNAGG	1 cut(s)	1008
BsuRI	GGCC	3 cut(s)	722, 1341, 1398
BtgI	CCRYGG	1 cut(s)	1170
BtsCI	GGATG	4 cut(s)	823, 916, 1023, 1717
BtsIMutI	CAGTG	4 cut(s)	836, 1036, 1379, 1566
Cac8I	GCNNGC	1 cut(s)	294
CaiI	CAGNNNCTG	2 cut(s)	890, 1879
CfoI	GCGC	4 cut(s)	246, 1144, 1940, 1974
Cfr13I	GGNCC	3 cut(s)	146, 1289, 1724
CviAII	CATG	4 cut(s)	649, 1045, 1306, 1735
DpnI	GATC	6 cut(s)	276, 963, 1022, 1118, 1321, 1793
DpnII	GATC	6 cut(s)	274, 961, 1020, 1116, 1319, 1791
Eam1104I	CTCTTC	6 cut(s)	282, 384, 629, 843, 912, 995
EarI	CTCTTC	6 cut(s)	282, 384, 629, 843, 912, 995
Ecl136II	GAGCTC	1 cut(s)	1442
Eco130I	CCWWGG	1 cut(s)	66
Eco24I	GRGCYC	1 cut(s)	1444
Eco31I	GGTCTC	1 cut(s)	997
Eco32I	GATATC	1 cut(s)	1224
Eco47I	GGWCC	3 cut(s)	146, 1289, 1724
Eco53kI	GAGCTC	1 cut(s)	1442
Eco57I	CTGAAG	3 cut(s)	432, 1296, 1542
Eco81I	CCTNAGG	1 cut(s)	1008
Eco91I	GGTNACC	1 cut(s)	1766
EcoICRI	GAGCTC	1 cut(s)	1442
EcoNI	CCTNNNNNAGG	2 cut(s)	93, 848
EcoO65I	GGTNACC	1 cut(s)	1766
EcoRI	GAATTC	1 cut(s)	257
EcoRII	CCWGG	2 cut(s)	94, 1285
EcoRV	GATATC	1 cut(s)	1224
EcoT14I	CCWWGG	1 cut(s)	66
EcoT22I	ATGCAT	3 cut(s)	235, 586, 1611
EcoT38I	GRGCYC	1 cut(s)	1444
ErhI	CCWWGG	1 cut(s)	66
FaeI	CATG	4 cut(s)	652, 1048, 1309, 1738
FalI	AAGNNNNNCTT	2 cut(s)	1767, 1799
FaqI	GGGAC	3 cut(s)	1055, 1061, 1737
FatI	CATG	4 cut(s)	648, 1044, 1305, 1734
FauI	CCCGC	1 cut(s)	528
FauNDI	CATATG	1 cut(s)	1566
FbaI	TGATCA	1 cut(s)	274
FblI	GTMKAC	1 cut(s)	653
Fnu4HI	GCNGC	1 cut(s)	759
FokI	GGATG	4 cut(s)	830, 923, 1030, 1704
FriOI	GRGCYC	1 cut(s)	1444
Fsp4HI	GCNGC	1 cut(s)	759
FspBI	CTAG	4 cut(s)	32, 179, 434, 662
GlaI	GCGC	4 cut(s)	245, 1143, 1939, 1973
GluI	GCNGC	1 cut(s)	759
GsaI	CCCAGC	2 cut(s)	271, 349
GsuI	CTGGAG	6 cut(s)	78, 282, 339, 704, 1398, 1617
HaeII	RGCGCY	1 cut(s)	247
HaeIII	GGCC	3 cut(s)	722, 1341, 1398
HapII	CCGG	3 cut(s)	247, 1721, 1862
HhaI	GCGC	4 cut(s)	246, 1144, 1940, 1974
Hin1II	CATG	4 cut(s)	652, 1048, 1309, 1738
Hin6I	GCGC	4 cut(s)	244, 1142, 1938, 1972
HinP1I	GCGC	4 cut(s)	244, 1142, 1938, 1972
HincII	GTYRAC	2 cut(s)	1732, 1781
HindII	GTYRAC	2 cut(s)	1732, 1781
HindIII	AAGCTT	1 cut(s)	202
HinfI	GANTC	6 cut(s)	99, 175, 335, 1090, 1207, 1679
HpaII	CCGG	3 cut(s)	247, 1721, 1862
Hpy166II	GTNNAC	7 cut(s)	396, 654, 1135, 1264, 1515, 1732, 1781
Hpy188I	TCNGA	5 cut(s)	256, 382, 471, 1813, 1830
Hpy188III	TCNNGA	8 cut(s)	179, 410, 631, 965, 1122, 1154, 1601, 1694
Hpy8I	GTNNAC	7 cut(s)	396, 654, 1135, 1264, 1515, 1732, 1781
HpyCH4III	ACNGT	6 cut(s)	400, 658, 669, 1369, 1798, 1819
HpyF10VI	GCNNNNNNNGC	5 cut(s)	41, 1199, 1546, 1570, 1669
Hsp92II	CATG	4 cut(s)	652, 1048, 1309, 1738
HspAI	GCGC	4 cut(s)	244, 1142, 1938, 1972
Ksp22I	TGATCA	1 cut(s)	274
Kzo9I	GATC	6 cut(s)	274, 961, 1020, 1116, 1319, 1791
LguI	GCTCTTC	2 cut(s)	282, 629
LmnI	GCTCC	7 cut(s)	40, 301, 320, 1069, 1387, 1439, 1447
Lsp1109I	GCAGC	1 cut(s)	745
LweI	GCATC	9 cut(s)	571, 591, 685, 877, 912, 1246, 1560, 1618, 1726
MaeI	CTAG	4 cut(s)	32, 179, 434, 662
MaeIII	GTNAC	3 cut(s)	747, 949, 1766
MalI	GATC	6 cut(s)	276, 963, 1022, 1118, 1321, 1793
MboI	GATC	6 cut(s)	274, 961, 1020, 1116, 1319, 1791
MfeI	CAATTG	2 cut(s)	72, 762
MflI	RGATCY	2 cut(s)	961, 1116
MhlI	GDGCHC	2 cut(s)	325, 1444
MmeI	TCCRAC	2 cut(s)	1417, 1879
Mph1103I	ATGCAT	3 cut(s)	235, 586, 1611
MseI	TTAA	1 cut(s)	444
MslI	CAYNNNNRTG	1 cut(s)	777
MspI	CCGG	3 cut(s)	247, 1721, 1862
MspR9I	CCNGG	4 cut(s)	96, 248, 1287, 1722
MunI	CAATTG	2 cut(s)	72, 762
Mva1269I	GAATGC	1 cut(s)	365
MvaI	CCWGG	2 cut(s)	96, 1287
MvnI	CGCG	2 cut(s)	1144, 1974
MwoI	GCNNNNNNNGC	5 cut(s)	41, 1199, 1546, 1570, 1669
NciI	CCSGG	2 cut(s)	248, 1722
NdeI	CATATG	1 cut(s)	1566
NdeII	GATC	6 cut(s)	274, 961, 1020, 1116, 1319, 1791
NlaIII	CATG	4 cut(s)	652, 1048, 1309, 1738
NlaIV	GGNNCC	6 cut(s)	16, 148, 963, 1168, 1650, 1725
NsiI	ATGCAT	3 cut(s)	235, 586, 1611
NspI	RCATGY	2 cut(s)	652, 1309
PciI	ACATGT	1 cut(s)	648
PciSI	GCTCTTC	2 cut(s)	282, 629
PctI	GAATGC	1 cut(s)	365
PfeI	GAWTC	6 cut(s)	99, 175, 335, 1090, 1207, 1679
PflMI	CCANNNNNTGG	2 cut(s)	1337, 1436
PfoI	TCCNGGA	2 cut(s)	94, 1720
PkrI	GCNGC	1 cut(s)	760
PscI	ACATGT	1 cut(s)	648
PsiI	TTATAA	1 cut(s)	240
Psp124BI	GAGCTC	1 cut(s)	1444
Psp6I	CCWGG	2 cut(s)	94, 1285
PspEI	GGTNACC	1 cut(s)	1766
PspFI	CCCAGC	2 cut(s)	267, 345
PspGI	CCWGG	2 cut(s)	94, 1285
PspN4I	GGNNCC	6 cut(s)	16, 148, 963, 1168, 1650, 1725
PspPI	GGNCC	3 cut(s)	146, 1289, 1724
PstI	CTGCAG	1 cut(s)	1849
PstNI	CAGNNNCTG	2 cut(s)	890, 1879
PsuI	RGATCY	2 cut(s)	961, 1116
RseI	CAYNNNNRTG	1 cut(s)	777
SacI	GAGCTC	1 cut(s)	1444
SapI	GCTCTTC	2 cut(s)	282, 629
SaqAI	TTAA	1 cut(s)	444
SatI	GCNGC	1 cut(s)	759
Sau3AI	GATC	6 cut(s)	274, 961, 1020, 1116, 1319, 1791
Sau96I	GGNCC	3 cut(s)	146, 1289, 1724
ScrFI	CCNGG	4 cut(s)	96, 248, 1287, 1722
SduI	GDGCHC	2 cut(s)	325, 1444
SfaNI	GCATC	9 cut(s)	571, 591, 685, 877, 912, 1246, 1560, 1618, 1726
SfcI	CTRYAG	3 cut(s)	1503, 1787, 1845
SinI	GGWCC	3 cut(s)	146, 1289, 1724
SmiMI	CAYNNNNRTG	1 cut(s)	777
SmlI	CTYRAG	5 cut(s)	536, 629, 1120, 1599, 1901
SmoI	CTYRAG	5 cut(s)	536, 629, 1120, 1599, 1901
SsiI	CCGC	2 cut(s)	521, 1974
SspI	AATATT	2 cut(s)	1464, 1483
SspMI	CTAG	4 cut(s)	32, 179, 434, 662
SstI	GAGCTC	1 cut(s)	1444
StyD4I	CCNGG	4 cut(s)	94, 246, 1285, 1720
StyI	CCWWGG	1 cut(s)	66
TaaI	ACNGT	6 cut(s)	400, 658, 669, 1369, 1798, 1819
TaqI	TCGA	4 cut(s)	789, 897, 1318, 1674
TfiI	GAWTC	6 cut(s)	99, 175, 335, 1090, 1207, 1679
Tru1I	TTAA	1 cut(s)	444
Tru9I	TTAA	1 cut(s)	444
TscAI	CASTG	4 cut(s)	843, 1036, 1379, 1566
TseI	GCWGC	1 cut(s)	758
TspDTI	ATGAA	5 cut(s)	300, 527, 927, 1751, 1776
TspGWI	ACGGA	2 cut(s)	159, 1187
TspRI	CASTG	4 cut(s)	843, 1036, 1379, 1566
Van91I	CCANNNNNTGG	2 cut(s)	1337, 1436
VpaK11BI	GGWCC	3 cut(s)	146, 1289, 1724
XagI	CCTNNNNNAGG	2 cut(s)	93, 848
XapI	RAATTY	4 cut(s)	257, 417, 1703, 1839
XbaI	TCTAGA	1 cut(s)	178
XceI	RCATGY	2 cut(s)	652, 1309
XmiI	GTMKAC	1 cut(s)	653
XspI	CTAG	4 cut(s)	32, 179, 434, 662
Zsp2I	ATGCAT	3 cut(s)	235, 586, 1611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.