Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0004915

Physical Location & Seq

Genomic Coordinates Reverse (-)

9327462 .. 9329534

Gene Structure 2073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G010070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGATAGGTTCCATCTTACCCTTACCAGCTCCTCCTGCAAAATCAGTTGCCACGCATACCAAGGCTATTGGTATCATACCTCCTCCTCCAGGAATCAAAGTCGTCATTGATAAAACTGCTCAGTTCGTGGCAAAGAACGGACCCCAATTTGAACAGGTCATAGCTAAGAATCTAGACATAGCAAAATCAAATCTAAGCTTTTTGATTTCCTCAAATCCCTACAATGCATATTATAAGCTCCGGGTGTCTGAATTCCTTGCCCAGCCTGATCAGTCTTATGAAAAGCCAGCGAGAGTTGTAGATGTTGAAGCTGGAGCACCAAAACCTGATTCTCCCTCCCAGCTTAGACCTGAATGCAAAGTGCCTGAACCATCAGAATCCGAAGAGTTTACTGTTCGGCTTCCTGAAGGAATTTGTGGAGAAGAACTAGATGTTATTAAACTCACAGCCCAGTTTGTAGCTCGGAATGGGAAATCGTTTTTGACAGGATTGAGAAGCAGAGAGATGAACAACCCCCTGTTCTATTTTCTCAGGCCTAATCATAGCATGTTCAACTTTTTCACTTCTCTGGCAGATGCATATTCAAAGGTGTTGATGCCACCAGAAGGATTGACAGGGAAGCTCAAGAAGAGCGTGGCAGACATGTCTACTGTGCTAGAACGGTGTGTGCATCGGCTGGAGTGGGAGGCTTATCAAAAGAAGGCAAAGCAGAAGGCCGAAGATGAGATTGAGCAGGAAAGATTACAAATGGCTGCAATTGATTGGCACGATAATGTCTTGGTCGAAGTCATAGACTTTGATGATGTTGAGGATGACTGTTTACCTCCTCCACTGAGCATCGAAGAGGTTATAAGGGGAAGCAAAGTTGTTATGGAAGCAGATGATAATGTCGAAATGGATATGGATGAAGAAGAGATGCAACTTGTTGAAGATGGAAAGAGGGTAACAGAGGTGGCCGATCCAGAACAACCACCAATGAGACTTGTGAAGAACTGGAAGAGACCTGAGGAGAGGATGATCCAATCCAGTGCTGAAAGGGACATGACGATTTCCCCTATTACTGGGGAGCTTGTCCCTAAGAATGAGATGTCTGAGCACATGAAGATTTCCCTCATTGATCCAAGATACAGAGAACAGAAAGAAAGGATGTTTGCTAAGATTCGGGAGACTAGTCTTGTTCTTGCACAGGACGATGAGATCTCAAGAAACATAGTGAACCTTGCGCGAACCCGTCCTGATATTTTTGGTTCCACCGAGGAGGAAGTTTCTAATGCTGTCAAGGCTGAGATTCAAAATCAAGCGATATCACAGAGTATCAATGGAGAGGATAAGAATGATGCTGTGAACAATGAGCGAAGGAACTTTCCTGGTCCAGCAAGACCTGACATGCCTTCAGTTCGACCTCAACCTCCACCAACTGGCCTTCTTCCTCGTGTTCCTCTAAGCACGGTTCATTGTTCAGCTCCTAATAGCATTGGCCTCCCAATACCTCCTCCAGTTGTCCAATTTCCATCGGTTGGAGCTCCTCTGCCACCTCCATCAATATTTACGACTGCAACTAATATTCCTACACCATCTCCACCTGTAGCTCAGTTTACACCTATGCAAGTTCCCCAAAGGCATTATATTCCTCCACCTTCAGTGCATATGATGCCCCTGCCTCCACCACCACCTTTACCTCAAGAAATGCATCTACCACCACCACCACCACCTCCAGTTGCAGAGGAGGAACCCAAGCCAAAGCGACAGAAGCTCGATGATTCAATGCTTATTCCAGAAGATAAATTTCTGGCACAGCATCCGGGACCAATCACGGTGCAGTCTTTATCTGAAACTGTTGGCAGTCTGAAAGAGAAAATTTCTGCAGAAATCCAACTTCCGGCAAACAAACAGAAATTGAGTGGAAAATCAGGCTTTCTCAAGGACAATTTTTCACTTGCATATTACAATGTTGGCGCAGGACAAACACTCGCTCTTTCAATAAGAGAGCGCGGTGGAAGGAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

669

Amino Acids

74.39

Weight (kDa)

5.41

Isoelectric Point (pI)

58.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	35 - 85	2.3e-14	Surp module
Surp	PF01805	143 - 194	4.6e-17	Surp module
PRP21_like_P	PF12230	213 - 409	1.6e-46	Pre-mRNA splicing factor PRP21 like protein
ubiquitin	PF00240	609 - 664	6.7e-08	Ubiquitin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06890
malus_domestica	MD10G1329400.v1.1
pyrus_communis	pycom05g32220 pycom10g27920
rosa_chinensis	RchiOBHm_Chr7g0191091
rosa_laevigata	RLG00000004475
rosa_multiflora	Rmu_sc0005151.1_g000002 Rmu_sc0005657.1_g000002 Rmu_sc0005903.1_g000003 Rmu_sc0005903.1_g000004 Rmu_sc0005903.1_g000005 Rmu_sc0013941.1_g000002 Rmu_sc0034959.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264050 Rroxscaffold_5G00351920
rosa_rugosa	Rorug01G0317000 Rorug01G0317100
rosa_samantha	Rh1AG145900 Rh1AG325300 Rh3BG312100 Rh4AG053700 Rh4BG051600 Rh4DG247700 Rh7AG116000 Rh7BG117500 Rh7CG120900 Rh7DG298100
rosa_wichuraiana	Rw1G028860 Rw7G010070 Rw7G010160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	234, 851
AccB7I	CCANNNNNTGG	2 cut(s)	1418, 1517
AccI	GTMKAC	1 cut(s)	647
AccII	CGCG	2 cut(s)	1225, 1992
AciI	CCGC	1 cut(s)	1992
AclWI	GGATC	3 cut(s)	953, 1012, 1112
AcoI	YGGCCR	1 cut(s)	954
AcsI	RAATTY	4 cut(s)	251, 411, 1784, 1857
AcuI	CTGAAG	3 cut(s)	426, 1377, 1623
AfiI	CCNNNNNNNGG	6 cut(s)	89, 605, 1061, 1418, 1517, 1879
AflIII	ACRYGT	1 cut(s)	642
AgsI	TTSAA	8 cut(s)	152, 308, 553, 585, 929, 1292, 1764, 1980
AhlI	ACTAGT	1 cut(s)	1169
AjnI	CCWGG	2 cut(s)	88, 1366
AjuI	GAANNNNNNNTTGG	2 cut(s)	313, 345
Alw21I	GWGCWC	3 cut(s)	319, 1098, 1525
Alw26I	GTCTC	3 cut(s)	973, 994, 1160
AlwI	GGATC	3 cut(s)	953, 1012, 1112
AoxI	GGCC	5 cut(s)	533, 714, 954, 1420, 1477
ApeKI	GCWGC	1 cut(s)	752
ApoI	RAATTY	4 cut(s)	251, 411, 1784, 1857
AspLEI	GCGC	3 cut(s)	1225, 1958, 1992
AspS9I	GGNCC	3 cut(s)	140, 1370, 1805
AsuC2I	CCSGG	2 cut(s)	242, 1803
AvaII	GGWCC	3 cut(s)	140, 1370, 1805
AxyI	CCTNAGG	1 cut(s)	1005
BanII	GRGCYC	1 cut(s)	1525
BauI	CACGAG	1 cut(s)	1431
Bbv12I	GWGCWC	3 cut(s)	319, 1098, 1525
BbvI	GCAGC	1 cut(s)	739
BccI	CCATC	6 cut(s)	20, 379, 926, 1519, 1546, 1582
BciT130I	CCWGG	2 cut(s)	90, 1368
BclI	TGATCA	1 cut(s)	268
BcnI	CCSGG	2 cut(s)	242, 1803
BcoDI	GTCTC	3 cut(s)	973, 994, 1160
BcuI	ACTAGT	1 cut(s)	1169
BfaI	CTAG	4 cut(s)	173, 428, 656, 1170
BfmI	CTRYAG	2 cut(s)	1584, 1863
BglII	AGATCT	1 cut(s)	1197
BisI	GCNGC	1 cut(s)	753
BlsI	GCNGC	1 cut(s)	754
Bme1390I	CCNGG	4 cut(s)	90, 242, 1368, 1803
Bme18I	GGWCC	3 cut(s)	140, 1370, 1805
BmgT120I	GGNCC	3 cut(s)	140, 1370, 1805
BmiI	GGNNCC	5 cut(s)	10, 142, 1249, 1731, 1806
BmrFI	CCNGG	4 cut(s)	90, 242, 1368, 1803
BmrI	ACTGGG	2 cut(s)	445, 1071
BmsI	GCATC	9 cut(s)	565, 585, 679, 846, 906, 1327, 1641, 1699, 1807
BmuI	ACTGGG	2 cut(s)	445, 1071
BpmI	CTGGAG	5 cut(s)	72, 333, 698, 1479, 1698
BpuEI	CTTGAG	4 cut(s)	608, 1186, 1665, 1904
BpuMI	CCSGG	2 cut(s)	242, 1803
BsaI	GGTCTC	1 cut(s)	994
BsaJI	CCNNGG	2 cut(s)	60, 1254
BsaXI	ACNNNNNCTCC	2 cut(s)	1561, 1591
Bsc4I	CCNNNNNNNGG	6 cut(s)	89, 605, 1061, 1418, 1517, 1879
Bse1I	ACTGG	7 cut(s)	451, 998, 1026, 1066, 1423, 1496, 1715
Bse21I	CCTNAGG	1 cut(s)	1005
BseBI	CCWGG	2 cut(s)	90, 1368
BseDI	CCNNGG	2 cut(s)	60, 1254
BseGI	GGATG	5 cut(s)	817, 910, 1020, 1152, 1798
BseLI	CCNNNNNNNGG	6 cut(s)	89, 605, 1061, 1418, 1517, 1879
BseMII	CTCAG	7 cut(s)	134, 544, 824, 996, 1083, 1275, 1604
BseNI	ACTGG	7 cut(s)	451, 998, 1026, 1066, 1423, 1496, 1715
BseRI	GAGGAG	9 cut(s)	21, 72, 75, 816, 1022, 1271, 1482, 1515, 1739
BseXI	GCAGC	1 cut(s)	739
BseYI	CCCAGC	2 cut(s)	261, 339
BsgI	GTGCAG	1 cut(s)	1838
Bsh1236I	CGCG	2 cut(s)	1225, 1992
BshFI	GGCC	5 cut(s)	535, 716, 956, 1422, 1479
BsiHKAI	GWGCWC	3 cut(s)	319, 1098, 1525
BsiSI	CCGG	3 cut(s)	241, 1802, 1880
BslFI	GGGAC	3 cut(s)	1052, 1058, 1818
BslI	CCNNNNNNNGG	6 cut(s)	89, 605, 1061, 1418, 1517, 1879
BsmAI	GTCTC	3 cut(s)	973, 994, 1160
BsmFI	GGGAC	3 cut(s)	1052, 1058, 1818
BsmI	GAATGC	1 cut(s)	359
BsnI	GGCC	5 cut(s)	535, 716, 956, 1422, 1479
Bso31I	GGTCTC	1 cut(s)	994
Bsp1286I	GDGCHC	3 cut(s)	319, 1098, 1525
Bsp143I	GATC	5 cut(s)	268, 958, 1017, 1117, 1197
BspACI	CCGC	1 cut(s)	1992
BspANI	GGCC	5 cut(s)	535, 716, 956, 1422, 1479
BspCNI	CTCAG	7 cut(s)	133, 543, 825, 997, 1084, 1276, 1603
BspFNI	CGCG	2 cut(s)	1225, 1992
BspLI	GGNNCC	5 cut(s)	10, 142, 1249, 1731, 1806
BspMAI	CTGCAG	1 cut(s)	1867
BspPI	GGATC	3 cut(s)	953, 1012, 1112
BspQI	GCTCTTC	1 cut(s)	623
BspTNI	GGTCTC	1 cut(s)	994
BsrI	ACTGG	7 cut(s)	451, 998, 1026, 1066, 1423, 1496, 1715
BssECI	CCNNGG	2 cut(s)	60, 1254
BssMI	GATC	5 cut(s)	268, 958, 1017, 1117, 1197
BssSI	CACGAG	1 cut(s)	1431
BssT1I	CCWWGG	1 cut(s)	60
Bst2BI	CACGAG	1 cut(s)	1431
Bst2UI	CCWGG	2 cut(s)	90, 1368
Bst4CI	ACNGT	7 cut(s)	394, 652, 663, 818, 1450, 1816, 1837
Bst6I	CTCTTC	6 cut(s)	378, 623, 837, 906, 992, 1997
BstAPI	GCANNNNNTGC	1 cut(s)	1651
BstC8I	GCNNGC	1 cut(s)	288
BstENI	CCTNNNNNAGG	1 cut(s)	87
BstF5I	GGATG	5 cut(s)	817, 910, 1020, 1152, 1798
BstFNI	CGCG	2 cut(s)	1225, 1992
BstHHI	GCGC	3 cut(s)	1225, 1958, 1992
BstKTI	GATC	5 cut(s)	271, 961, 1020, 1120, 1200
BstMAI	GTCTC	3 cut(s)	973, 994, 1160
BstMBI	GATC	5 cut(s)	268, 958, 1017, 1117, 1197
BstMWI	GCNNNNNNNGC	4 cut(s)	35, 1280, 1651, 1750
BstNI	CCWGG	2 cut(s)	90, 1368
BstNSI	RCATGY	3 cut(s)	550, 646, 1390
BstSCI	CCNGG	4 cut(s)	88, 240, 1366, 1801
BstSFI	CTRYAG	2 cut(s)	1584, 1863
BstUI	CGCG	2 cut(s)	1225, 1992
BstV1I	GCAGC	1 cut(s)	739
BstX2I	RGATCY	1 cut(s)	1197
BstYI	RGATCY	1 cut(s)	1197
Bsu36I	CCTNAGG	1 cut(s)	1005
BsuRI	GGCC	5 cut(s)	535, 716, 956, 1422, 1479
BtsCI	GGATG	5 cut(s)	817, 910, 1020, 1152, 1798
BtsIMutI	CAGTG	3 cut(s)	830, 1033, 1647
Cac8I	GCNNGC	1 cut(s)	288
CfoI	GCGC	3 cut(s)	1225, 1958, 1992
Cfr13I	GGNCC	3 cut(s)	140, 1370, 1805
CviAII	CATG	5 cut(s)	547, 643, 1042, 1099, 1387
DpnI	GATC	5 cut(s)	270, 960, 1019, 1119, 1199
DpnII	GATC	5 cut(s)	268, 958, 1017, 1117, 1197
EaeI	YGGCCR	1 cut(s)	954
Eam1104I	CTCTTC	6 cut(s)	378, 623, 837, 906, 992, 1997
EarI	CTCTTC	6 cut(s)	378, 623, 837, 906, 992, 1997
Ecl136II	GAGCTC	1 cut(s)	1523
Eco130I	CCWWGG	1 cut(s)	60
Eco147I	AGGCCT	1 cut(s)	535
Eco24I	GRGCYC	1 cut(s)	1525
Eco31I	GGTCTC	1 cut(s)	994
Eco32I	GATATC	1 cut(s)	1305
Eco47I	GGWCC	3 cut(s)	140, 1370, 1805
Eco53kI	GAGCTC	1 cut(s)	1523
Eco57I	CTGAAG	3 cut(s)	426, 1377, 1623
Eco81I	CCTNAGG	1 cut(s)	1005
EcoICRI	GAGCTC	1 cut(s)	1523
EcoNI	CCTNNNNNAGG	1 cut(s)	87
EcoRI	GAATTC	1 cut(s)	251
EcoRII	CCWGG	2 cut(s)	88, 1366
EcoRV	GATATC	1 cut(s)	1305
EcoT14I	CCWWGG	1 cut(s)	60
EcoT22I	ATGCAT	3 cut(s)	229, 580, 1692
EcoT38I	GRGCYC	1 cut(s)	1525
ErhI	CCWWGG	1 cut(s)	60
FaeI	CATG	5 cut(s)	550, 646, 1045, 1102, 1390
FaqI	GGGAC	3 cut(s)	1052, 1058, 1818
FatI	CATG	5 cut(s)	546, 642, 1041, 1098, 1386
FauNDI	CATATG	1 cut(s)	1647
FbaI	TGATCA	1 cut(s)	268
FblI	GTMKAC	1 cut(s)	647
Fnu4HI	GCNGC	1 cut(s)	753
FokI	GGATG	5 cut(s)	824, 917, 1027, 1159, 1785
FriOI	GRGCYC	1 cut(s)	1525
Fsp4HI	GCNGC	1 cut(s)	753
FspBI	CTAG	4 cut(s)	173, 428, 656, 1170
GlaI	GCGC	3 cut(s)	1224, 1957, 1991
GluI	GCNGC	1 cut(s)	753
GsaI	CCCAGC	2 cut(s)	265, 343
GsuI	CTGGAG	5 cut(s)	72, 333, 698, 1479, 1698
HaeIII	GGCC	5 cut(s)	535, 716, 956, 1422, 1479
HapII	CCGG	3 cut(s)	241, 1802, 1880
HhaI	GCGC	3 cut(s)	1225, 1958, 1992
Hin1II	CATG	5 cut(s)	550, 646, 1045, 1102, 1390
Hin6I	GCGC	3 cut(s)	1223, 1956, 1990
HinP1I	GCGC	3 cut(s)	1223, 1956, 1990
HindIII	AAGCTT	1 cut(s)	196
HinfI	GANTC	7 cut(s)	93, 169, 329, 377, 1159, 1288, 1760
HpaII	CCGG	3 cut(s)	241, 1802, 1880
Hpy166II	GTNNAC	6 cut(s)	390, 648, 821, 1216, 1345, 1596
Hpy188I	TCNGA	7 cut(s)	250, 376, 382, 465, 1093, 1831, 1848
Hpy188III	TCNNGA	9 cut(s)	173, 404, 625, 962, 1163, 1203, 1235, 1682, 1775
Hpy8I	GTNNAC	6 cut(s)	390, 648, 821, 1216, 1345, 1596
HpyAV	CCTTC	9 cut(s)	401, 599, 694, 706, 1350, 1401, 1433, 1647, 1992
HpyCH4III	ACNGT	7 cut(s)	394, 652, 663, 818, 1450, 1816, 1837
HpyF10VI	GCNNNNNNNGC	4 cut(s)	35, 1280, 1651, 1750
Hsp92II	CATG	5 cut(s)	550, 646, 1045, 1102, 1390
HspAI	GCGC	3 cut(s)	1223, 1956, 1990
Ksp22I	TGATCA	1 cut(s)	268
Kzo9I	GATC	5 cut(s)	268, 958, 1017, 1117, 1197
LguI	GCTCTTC	1 cut(s)	623
LmnI	GCTCC	7 cut(s)	34, 243, 314, 1066, 1468, 1520, 1528
Lsp1109I	GCAGC	1 cut(s)	739
LweI	GCATC	9 cut(s)	565, 585, 679, 846, 906, 1327, 1641, 1699, 1807
MaeI	CTAG	4 cut(s)	173, 428, 656, 1170
MaeIII	GTNAC	1 cut(s)	943
MalI	GATC	5 cut(s)	270, 960, 1019, 1119, 1199
MboI	GATC	5 cut(s)	268, 958, 1017, 1117, 1197
MfeI	CAATTG	1 cut(s)	756
MflI	RGATCY	1 cut(s)	1197
MhlI	GDGCHC	3 cut(s)	319, 1098, 1525
MluCI	AATT	9 cut(s)	146, 251, 411, 756, 1505, 1784, 1857, 1895, 1927
MmeI	TCCRAC	2 cut(s)	1498, 1897
Mph1103I	ATGCAT	3 cut(s)	229, 580, 1692
MseI	TTAA	1 cut(s)	438
MslI	CAYNNNNRTG	1 cut(s)	771
MspI	CCGG	3 cut(s)	241, 1802, 1880
MspR9I	CCNGG	4 cut(s)	90, 242, 1368, 1803
MunI	CAATTG	1 cut(s)	756
Mva1269I	GAATGC	1 cut(s)	359
MvaI	CCWGG	2 cut(s)	90, 1368
MvnI	CGCG	2 cut(s)	1225, 1992
MwoI	GCNNNNNNNGC	4 cut(s)	35, 1280, 1651, 1750
NciI	CCSGG	2 cut(s)	242, 1803
NdeI	CATATG	1 cut(s)	1647
NdeII	GATC	5 cut(s)	268, 958, 1017, 1117, 1197
NlaIII	CATG	5 cut(s)	550, 646, 1045, 1102, 1390
NlaIV	GGNNCC	5 cut(s)	10, 142, 1249, 1731, 1806
NsiI	ATGCAT	3 cut(s)	229, 580, 1692
NspI	RCATGY	3 cut(s)	550, 646, 1390
PceI	AGGCCT	1 cut(s)	535
PciI	ACATGT	1 cut(s)	642
PciSI	GCTCTTC	1 cut(s)	623
PctI	GAATGC	1 cut(s)	359
PfeI	GAWTC	7 cut(s)	93, 169, 329, 377, 1159, 1288, 1760
PflMI	CCANNNNNTGG	2 cut(s)	1418, 1517
PfoI	TCCNGGA	2 cut(s)	88, 1801
PkrI	GCNGC	1 cut(s)	754
PscI	ACATGT	1 cut(s)	642
PsiI	TTATAA	2 cut(s)	234, 851
Psp124BI	GAGCTC	1 cut(s)	1525
Psp6I	CCWGG	2 cut(s)	88, 1366
PspFI	CCCAGC	2 cut(s)	261, 339
PspGI	CCWGG	2 cut(s)	88, 1366
PspN4I	GGNNCC	5 cut(s)	10, 142, 1249, 1731, 1806
PspPI	GGNCC	3 cut(s)	140, 1370, 1805
PstI	CTGCAG	1 cut(s)	1867
PsuI	RGATCY	1 cut(s)	1197
RseI	CAYNNNNRTG	1 cut(s)	771
SacI	GAGCTC	1 cut(s)	1525
SapI	GCTCTTC	1 cut(s)	623
SaqAI	TTAA	1 cut(s)	438
SatI	GCNGC	1 cut(s)	753
Sau3AI	GATC	5 cut(s)	268, 958, 1017, 1117, 1197
Sau96I	GGNCC	3 cut(s)	140, 1370, 1805
ScrFI	CCNGG	4 cut(s)	90, 242, 1368, 1803
SduI	GDGCHC	3 cut(s)	319, 1098, 1525
SfaNI	GCATC	9 cut(s)	565, 585, 679, 846, 906, 1327, 1641, 1699, 1807
SfcI	CTRYAG	2 cut(s)	1584, 1863
SinI	GGWCC	3 cut(s)	140, 1370, 1805
SmiMI	CAYNNNNRTG	1 cut(s)	771
SmlI	CTYRAG	4 cut(s)	623, 1201, 1680, 1919
SmoI	CTYRAG	4 cut(s)	623, 1201, 1680, 1919
SpeI	ACTAGT	1 cut(s)	1169
Sse9I	AATT	9 cut(s)	146, 251, 411, 756, 1505, 1784, 1857, 1895, 1927
SseBI	AGGCCT	1 cut(s)	535
SsiI	CCGC	1 cut(s)	1992
SspI	AATATT	2 cut(s)	1545, 1564
SspMI	CTAG	4 cut(s)	173, 428, 656, 1170
SstI	GAGCTC	1 cut(s)	1525
StuI	AGGCCT	1 cut(s)	535
StyD4I	CCNGG	4 cut(s)	88, 240, 1366, 1801
StyI	CCWWGG	1 cut(s)	60
TaaI	ACNGT	7 cut(s)	394, 652, 663, 818, 1450, 1816, 1837
TaqI	TCGA	5 cut(s)	783, 840, 891, 1399, 1755
TasI	AATT	9 cut(s)	146, 251, 411, 756, 1505, 1784, 1857, 1895, 1927
TfiI	GAWTC	7 cut(s)	93, 169, 329, 377, 1159, 1288, 1760
Tru1I	TTAA	1 cut(s)	438
Tru9I	TTAA	1 cut(s)	438
TscAI	CASTG	3 cut(s)	837, 1033, 1647
TseI	GCWGC	1 cut(s)	752
TspDTI	ATGAA	5 cut(s)	294, 521, 921, 1115, 1442
TspGWI	ACGGA	1 cut(s)	153
TspRI	CASTG	3 cut(s)	837, 1033, 1647
Van91I	CCANNNNNTGG	2 cut(s)	1418, 1517
VpaK11BI	GGWCC	3 cut(s)	140, 1370, 1805
XagI	CCTNNNNNAGG	1 cut(s)	87
XapI	RAATTY	4 cut(s)	251, 411, 1784, 1857
XbaI	TCTAGA	1 cut(s)	172
XceI	RCATGY	3 cut(s)	550, 646, 1390
XmiI	GTMKAC	1 cut(s)	647
XspI	CTAG	4 cut(s)	173, 428, 656, 1170
Zsp2I	ATGCAT	3 cut(s)	229, 580, 1692

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.