Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0004915

Physical Location & Seq

Genomic Coordinates Forward (+)

8783177 .. 8785258

Gene Structure 2082 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG117500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGATGATGATAGGTTCCATCTTACCCTTACCAGCTCCTCCTGCAAAATCAGTTGCCACGCATACCAAGGCTATTGGTATCATACCTCCTCCTCCAGGAATCAAAGTCATCATTGATAAAACTGCTCAGTTCGTGGCAAAGAACGGACCCCAATTTGAACAGGTCATAGCTAAGAATCTAGACATAGCAAAATCAAATCTAAGCTTTTTGATTTCCTCAAATCCCTACAATGCATATTATAAGCGCCGGGTGTCTGAATTCCTTGTCCAGCCCGATCAGTCTTATGAAGAGCCAGCTCCAGTTGTAGATGTTGAAGCTGGAGCACCAAAACCTGATTCTCCCTCCCAGCTTAGACCTGAATGCAAAGTGCCTGAACCATCAGAACCCGAAGAGTTTACTGTTCGGCTTCCTGAAGGAATTTGTGGAGAAGAACTAGATGTTATTAAACTCACAGCCCAGTTTGTAGCTCGGAATGGGAAATCGTTTTTGACAGGATTGAGAAGCAGAGAGATGAACAACCCCCTGTTCTATTTTCTCAAGCCTCATCATAGCATGTTCAACTTTTTCACTTCTCTAGCAGATGCATATTCAAAGGTGTTGATGCCACCAGAAGGATTGACAGGGAAGCTCAAGAAGAGCGTGGCAGACATGTCTACTGTGCTAGAACGGTGTGTGCATCGGCTGGAGTGGGAGACTTATCAAAAGCAGGCAAAGCAGAAGGCCGAAGATGAGATTGAGCAGGAAAGGTTACAAATGGCTGCAATTGATTGGCACGATAATGTCTTGGTCGAAGTCATAGACTTTGATGATGTTGAGGATGACTATTTACCTTCTCCACTGAGCATCGAAGAGGTTATAAGGGGAAGCAAAGTTGTTATGGAAGCAGATGATAATGTCGAAATGGATATGGATGAAGAAGAGATGCAACTTGTTGAAGATGGAAAGAGGGTAACAGAGGTGGATCCAGAACAACCACCAATGAGAATTGTGAAGAACTGGAAGAGACCTGAGGTGAGGATGATCCAATCCAGTGCTGAAAGGGACATGACGATTTCCCCTATTACTGGGGAGCTTGTCCCTAACAATGAGATGTCTGAGCACATGAAGATTTCCCTCATTGATCCAAGATACATAGAACAGAAAGAAAGGATGTTTGCTAAGATTCGGGAGACTAGTCTTGTTCTTGCACAGGACGATGAGATCTCAAGAAACATAGTGAACCTTGCGCGAACCCGTCCTGATATTTTTGGTTCCACGGAGGAGGAAGTTTCAAATGCTGTCAAGGCTGAGATTCAAAATCAAGCGATATCACAGAGTATCAATGGAGAGGATAAGAATGATGCTGTGAACAATGAGCGAAGGAACTTTCCTGGTCCAGCAAGACCTGACATGCCTTCAGTTCGACCTCAACCTCCACCAACTGGCCTTCTTCCTCGTATTCCTCCAAGCACGGTTCGGTGTTCAGCTCCTAATAGCATTGGCCTCCCAATACCTCCTCCAGTTGTCCAATTTCCATCGGTTGGAGCTCCTCTGCCACCTCCATCGATATTTACGACTGCAACTAATATTCCTGCACCATCTCCACCTGTAGCTCAGTTTACACCTATGCAAGTTCCCCAAAGGCATTATATGCCTCCACCTTCAGTGCATATGATGCCCCTGCCTCCACTACCACCTTTACCTCAAGAAATGCATCTACCACCACCACCACCTCCACCACCTCCAGTTGCAGAGGAGGAACCCAAGCCAAAGCGACAGAAGCTCGATGATTCAATGCTTATTCCAGAAGATAAATTTCTGGCACAGCATCCGGGACCAGTTGACATGAATGTATCTGTTCCTATTGTTGATGAAGGTAACCTCAAAGGCCAACTTCTACAGATCACGGTGCAGTCTTTATCTGAAACTGTTGGCAGTCTTAAAGAGAAAATTTCTGCAGAAATCCAACTTCCGGCAAACAAACAGAAATTGAGTGGAAAATCAGGCTTTCTCAAGGACAATTTTTCACTTGCATATTACAATGTTGGCGCAGGACAAGCACTCGCTCTTTCAATAAGAGAGCGCGGTGGAAGGAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

693

Amino Acids

77.05

Weight (kDa)

5.19

Isoelectric Point (pI)

61.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	37 - 87	2.4e-15	Surp module
Surp	PF01805	145 - 196	8.3e-17	Surp module
PRP21_like_P	PF12230	215 - 410	1.1e-45	Pre-mRNA splicing factor PRP21 like protein
ubiquitin	PF00240	632 - 687	4.4e-07	Ubiquitin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06890
malus_domestica	MD10G1329400.v1.1
pyrus_communis	pycom05g32220 pycom10g27920
rosa_chinensis	RchiOBHm_Chr7g0191091
rosa_laevigata	RLG00000004475
rosa_multiflora	Rmu_sc0005151.1_g000002 Rmu_sc0005657.1_g000002 Rmu_sc0005903.1_g000003 Rmu_sc0005903.1_g000004 Rmu_sc0005903.1_g000005 Rmu_sc0013941.1_g000002 Rmu_sc0034959.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264050 Rroxscaffold_5G00351920
rosa_rugosa	Rorug01G0317000 Rorug01G0317100
rosa_samantha	Rh1AG145900 Rh1AG325300 Rh3BG312100 Rh4AG053700 Rh4BG051600 Rh4DG247700 Rh7AG116000 Rh7BG117500 Rh7CG120900 Rh7DG298100
rosa_wichuraiana	Rw1G028860 Rw7G010070 Rw7G010160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	240, 857
AccB7I	CCANNNNNTGG	2 cut(s)	1421, 1520
AccI	GTMKAC	1 cut(s)	653
AccII	CGCG	2 cut(s)	1228, 2064
AciI	CCGC	1 cut(s)	2064
AclWI	GGATC	4 cut(s)	956, 969, 1015, 1115
AcsI	RAATTY	4 cut(s)	257, 417, 1793, 1929
AcuI	CTGAAG	3 cut(s)	432, 1380, 1626
AfiI	CCNNNNNNNGG	6 cut(s)	95, 611, 1064, 1421, 1520, 1951
AflIII	ACRYGT	1 cut(s)	648
AgsI	TTSAA	9 cut(s)	158, 314, 559, 591, 935, 1272, 1295, 1773, 2052
AhlI	ACTAGT	1 cut(s)	1172
AjnI	CCWGG	2 cut(s)	94, 1369
AjuI	GAANNNNNNNTTGG	2 cut(s)	319, 351
Alw21I	GWGCWC	3 cut(s)	325, 1101, 1528
Alw26I	GTCTC	3 cut(s)	686, 997, 1163
AlwI	GGATC	4 cut(s)	956, 969, 1015, 1115
AoxI	GGCC	4 cut(s)	720, 1423, 1480, 1867
ApeKI	GCWGC	1 cut(s)	758
ApoI	RAATTY	4 cut(s)	257, 417, 1793, 1929
AspLEI	GCGC	4 cut(s)	246, 1228, 2030, 2064
AspS9I	GGNCC	3 cut(s)	146, 1373, 1814
AsuC2I	CCSGG	2 cut(s)	248, 1812
AsuHPI	GGTGA	1 cut(s)	1024
AvaII	GGWCC	3 cut(s)	146, 1373, 1814
AxyI	CCTNAGG	1 cut(s)	1008
BamHI	GGATCC	1 cut(s)	961
BanII	GRGCYC	1 cut(s)	1528
Bbv12I	GWGCWC	3 cut(s)	325, 1101, 1528
BbvI	GCAGC	1 cut(s)	745
BccI	CCATC	6 cut(s)	26, 385, 932, 1522, 1549, 1585
BciT130I	CCWGG	2 cut(s)	96, 1371
BcnI	CCSGG	2 cut(s)	248, 1812
BcoDI	GTCTC	3 cut(s)	686, 997, 1163
BcuI	ACTAGT	1 cut(s)	1172
BfaI	CTAG	5 cut(s)	179, 434, 575, 662, 1173
BfmI	CTRYAG	3 cut(s)	1587, 1877, 1935
BfoI	RGCGCY	1 cut(s)	247
BglII	AGATCT	1 cut(s)	1200
BisI	GCNGC	1 cut(s)	759
BlsI	GCNGC	1 cut(s)	760
Bme1390I	CCNGG	4 cut(s)	96, 248, 1371, 1812
Bme18I	GGWCC	3 cut(s)	146, 1373, 1814
BmgT120I	GGNCC	3 cut(s)	146, 1373, 1814
BmiI	GGNNCC	6 cut(s)	16, 148, 963, 1252, 1740, 1815
BmrFI	CCNGG	4 cut(s)	96, 248, 1371, 1812
BmrI	ACTGGG	2 cut(s)	451, 1074
BmsI	GCATC	9 cut(s)	571, 591, 685, 852, 912, 1330, 1644, 1702, 1816
BmuI	ACTGGG	2 cut(s)	451, 1074
BpmI	CTGGAG	6 cut(s)	78, 282, 339, 704, 1482, 1707
BpuEI	CTTGAG	5 cut(s)	521, 614, 1189, 1668, 1976
BpuMI	CCSGG	2 cut(s)	248, 1812
Bsa29I	ATCGAT	1 cut(s)	1544
BsaI	GGTCTC	1 cut(s)	997
BsaJI	CCNNGG	2 cut(s)	66, 1254
Bsc4I	CCNNNNNNNGG	6 cut(s)	95, 611, 1064, 1421, 1520, 1951
Bse1I	ACTGG	9 cut(s)	299, 457, 1001, 1029, 1069, 1426, 1499, 1724, 1817
Bse21I	CCTNAGG	1 cut(s)	1008
BseBI	CCWGG	2 cut(s)	96, 1371
BseCI	ATCGAT	1 cut(s)	1544
BseDI	CCNNGG	2 cut(s)	66, 1254
BseGI	GGATG	5 cut(s)	823, 916, 1023, 1155, 1807
BseLI	CCNNNNNNNGG	6 cut(s)	95, 611, 1064, 1421, 1520, 1951
BseMII	CTCAG	6 cut(s)	140, 830, 999, 1086, 1278, 1607
BseNI	ACTGG	9 cut(s)	299, 457, 1001, 1029, 1069, 1426, 1499, 1724, 1817
BseRI	GAGGAG	7 cut(s)	27, 78, 81, 1274, 1485, 1518, 1748
BseXI	GCAGC	1 cut(s)	745
BseYI	CCCAGC	1 cut(s)	345
BsgI	GTGCAG	2 cut(s)	1557, 1910
Bsh1236I	CGCG	2 cut(s)	1228, 2064
BshFI	GGCC	4 cut(s)	722, 1425, 1482, 1869
BshVI	ATCGAT	1 cut(s)	1544
BsiHKAI	GWGCWC	3 cut(s)	325, 1101, 1528
BsiSI	CCGG	3 cut(s)	247, 1811, 1952
BslFI	GGGAC	3 cut(s)	1055, 1061, 1827
BslI	CCNNNNNNNGG	6 cut(s)	95, 611, 1064, 1421, 1520, 1951
BsmAI	GTCTC	3 cut(s)	686, 997, 1163
BsmFI	GGGAC	3 cut(s)	1055, 1061, 1827
BsmI	GAATGC	1 cut(s)	365
BsnI	GGCC	4 cut(s)	722, 1425, 1482, 1869
Bso31I	GGTCTC	1 cut(s)	997
Bsp1286I	GDGCHC	3 cut(s)	325, 1101, 1528
Bsp143I	GATC	6 cut(s)	274, 961, 1020, 1120, 1200, 1881
BspACI	CCGC	1 cut(s)	2064
BspANI	GGCC	4 cut(s)	722, 1425, 1482, 1869
BspCNI	CTCAG	6 cut(s)	139, 831, 1000, 1087, 1279, 1606
BspDI	ATCGAT	1 cut(s)	1544
BspFNI	CGCG	2 cut(s)	1228, 2064
BspLI	GGNNCC	6 cut(s)	16, 148, 963, 1252, 1740, 1815
BspMAI	CTGCAG	1 cut(s)	1939
BspPI	GGATC	4 cut(s)	956, 969, 1015, 1115
BspQI	GCTCTTC	2 cut(s)	282, 629
BspTNI	GGTCTC	1 cut(s)	997
BsrI	ACTGG	9 cut(s)	299, 457, 1001, 1029, 1069, 1426, 1499, 1724, 1817
BssECI	CCNNGG	2 cut(s)	66, 1254
BssMI	GATC	6 cut(s)	274, 961, 1020, 1120, 1200, 1881
BssT1I	CCWWGG	1 cut(s)	66
Bst2UI	CCWGG	2 cut(s)	96, 1371
Bst4CI	ACNGT	6 cut(s)	400, 658, 669, 1453, 1888, 1909
Bst6I	CTCTTC	7 cut(s)	282, 384, 629, 843, 912, 995, 2069
BstAPI	GCANNNNNTGC	2 cut(s)	1630, 1654
BstC8I	GCNNGC	2 cut(s)	294, 708
BstDSI	CCRYGG	1 cut(s)	1254
BstEII	GGTNACC	1 cut(s)	1856
BstENI	CCTNNNNNAGG	1 cut(s)	93
BstF5I	GGATG	5 cut(s)	823, 916, 1023, 1155, 1807
BstFNI	CGCG	2 cut(s)	1228, 2064
BstH2I	RGCGCY	1 cut(s)	247
BstHHI	GCGC	4 cut(s)	246, 1228, 2030, 2064
BstKTI	GATC	6 cut(s)	277, 964, 1023, 1123, 1203, 1884
BstMAI	GTCTC	3 cut(s)	686, 997, 1163
BstMBI	GATC	6 cut(s)	274, 961, 1020, 1120, 1200, 1881
BstMWI	GCNNNNNNNGC	7 cut(s)	41, 712, 1283, 1630, 1654, 1759, 2036
BstNI	CCWGG	2 cut(s)	96, 1371
BstNSI	RCATGY	3 cut(s)	556, 652, 1393
BstPI	GGTNACC	1 cut(s)	1856
BstSCI	CCNGG	4 cut(s)	94, 246, 1369, 1810
BstSFI	CTRYAG	3 cut(s)	1587, 1877, 1935
BstUI	CGCG	2 cut(s)	1228, 2064
BstV1I	GCAGC	1 cut(s)	745
BstX2I	RGATCY	2 cut(s)	961, 1200
BstYI	RGATCY	2 cut(s)	961, 1200
Bsu15I	ATCGAT	1 cut(s)	1544
Bsu36I	CCTNAGG	1 cut(s)	1008
BsuRI	GGCC	4 cut(s)	722, 1425, 1482, 1869
BsuTUI	ATCGAT	1 cut(s)	1544
BtgI	CCRYGG	1 cut(s)	1254
BtsCI	GGATG	5 cut(s)	823, 916, 1023, 1155, 1807
BtsIMutI	CAGTG	3 cut(s)	836, 1036, 1650
Cac8I	GCNNGC	2 cut(s)	294, 708
CfoI	GCGC	4 cut(s)	246, 1228, 2030, 2064
Cfr13I	GGNCC	3 cut(s)	146, 1373, 1814
ClaI	ATCGAT	1 cut(s)	1544
CviAII	CATG	6 cut(s)	553, 649, 1045, 1102, 1390, 1825
DpnI	GATC	6 cut(s)	276, 963, 1022, 1122, 1202, 1883
DpnII	GATC	6 cut(s)	274, 961, 1020, 1120, 1200, 1881
Eam1104I	CTCTTC	7 cut(s)	282, 384, 629, 843, 912, 995, 2069
EarI	CTCTTC	7 cut(s)	282, 384, 629, 843, 912, 995, 2069
Ecl136II	GAGCTC	1 cut(s)	1526
Eco130I	CCWWGG	1 cut(s)	66
Eco24I	GRGCYC	1 cut(s)	1528
Eco31I	GGTCTC	1 cut(s)	997
Eco32I	GATATC	1 cut(s)	1308
Eco47I	GGWCC	3 cut(s)	146, 1373, 1814
Eco53kI	GAGCTC	1 cut(s)	1526
Eco57I	CTGAAG	3 cut(s)	432, 1380, 1626
Eco81I	CCTNAGG	1 cut(s)	1008
Eco91I	GGTNACC	1 cut(s)	1856
EcoICRI	GAGCTC	1 cut(s)	1526
EcoNI	CCTNNNNNAGG	1 cut(s)	93
EcoO65I	GGTNACC	1 cut(s)	1856
EcoRI	GAATTC	1 cut(s)	257
EcoRII	CCWGG	2 cut(s)	94, 1369
EcoRV	GATATC	1 cut(s)	1308
EcoT14I	CCWWGG	1 cut(s)	66
EcoT22I	ATGCAT	3 cut(s)	235, 586, 1695
EcoT38I	GRGCYC	1 cut(s)	1528
ErhI	CCWWGG	1 cut(s)	66
FaeI	CATG	6 cut(s)	556, 652, 1048, 1105, 1393, 1828
FalI	AAGNNNNNCTT	2 cut(s)	1857, 1889
FaqI	GGGAC	3 cut(s)	1055, 1061, 1827
FatI	CATG	6 cut(s)	552, 648, 1044, 1101, 1389, 1824
FauNDI	CATATG	1 cut(s)	1650
FblI	GTMKAC	1 cut(s)	653
Fnu4HI	GCNGC	1 cut(s)	759
FokI	GGATG	5 cut(s)	830, 923, 1030, 1162, 1794
FriOI	GRGCYC	1 cut(s)	1528
Fsp4HI	GCNGC	1 cut(s)	759
FspBI	CTAG	5 cut(s)	179, 434, 575, 662, 1173
GlaI	GCGC	4 cut(s)	245, 1227, 2029, 2063
GluI	GCNGC	1 cut(s)	759
GsaI	CCCAGC	1 cut(s)	349
GsuI	CTGGAG	6 cut(s)	78, 282, 339, 704, 1482, 1707
HaeII	RGCGCY	1 cut(s)	247
HaeIII	GGCC	4 cut(s)	722, 1425, 1482, 1869
HapII	CCGG	3 cut(s)	247, 1811, 1952
HhaI	GCGC	4 cut(s)	246, 1228, 2030, 2064
Hin1II	CATG	6 cut(s)	556, 652, 1048, 1105, 1393, 1828
Hin6I	GCGC	4 cut(s)	244, 1226, 2028, 2062
HinP1I	GCGC	4 cut(s)	244, 1226, 2028, 2062
HincII	GTYRAC	1 cut(s)	1822
HindII	GTYRAC	1 cut(s)	1822
HindIII	AAGCTT	1 cut(s)	202
HinfI	GANTC	6 cut(s)	99, 175, 335, 1162, 1291, 1769
HpaII	CCGG	3 cut(s)	247, 1811, 1952
HphI	GGTGA	1 cut(s)	1024
Hpy166II	GTNNAC	6 cut(s)	396, 654, 1219, 1348, 1599, 1822
Hpy188I	TCNGA	5 cut(s)	256, 382, 471, 1096, 1903
Hpy188III	TCNNGA	9 cut(s)	179, 410, 631, 965, 1166, 1206, 1238, 1685, 1784
Hpy8I	GTNNAC	6 cut(s)	396, 654, 1219, 1348, 1599, 1822
HpyCH4III	ACNGT	6 cut(s)	400, 658, 669, 1453, 1888, 1909
HpyF10VI	GCNNNNNNNGC	7 cut(s)	41, 712, 1283, 1630, 1654, 1759, 2036
Hsp92II	CATG	6 cut(s)	556, 652, 1048, 1105, 1393, 1828
HspAI	GCGC	4 cut(s)	244, 1226, 2028, 2062
Kzo9I	GATC	6 cut(s)	274, 961, 1020, 1120, 1200, 1881
LguI	GCTCTTC	2 cut(s)	282, 629
LmnI	GCTCC	7 cut(s)	40, 301, 320, 1069, 1471, 1523, 1531
Lsp1109I	GCAGC	1 cut(s)	745
LweI	GCATC	9 cut(s)	571, 591, 685, 852, 912, 1330, 1644, 1702, 1816
MaeI	CTAG	5 cut(s)	179, 434, 575, 662, 1173
MaeIII	GTNAC	3 cut(s)	747, 949, 1856
MalI	GATC	6 cut(s)	276, 963, 1022, 1122, 1202, 1883
MboI	GATC	6 cut(s)	274, 961, 1020, 1120, 1200, 1881
MfeI	CAATTG	1 cut(s)	762
MflI	RGATCY	2 cut(s)	961, 1200
MhlI	GDGCHC	3 cut(s)	325, 1101, 1528
MmeI	TCCRAC	2 cut(s)	1501, 1969
Mph1103I	ATGCAT	3 cut(s)	235, 586, 1695
MseI	TTAA	2 cut(s)	444, 1920
MslI	CAYNNNNRTG	1 cut(s)	777
MspI	CCGG	3 cut(s)	247, 1811, 1952
MspR9I	CCNGG	4 cut(s)	96, 248, 1371, 1812
MunI	CAATTG	1 cut(s)	762
Mva1269I	GAATGC	1 cut(s)	365
MvaI	CCWGG	2 cut(s)	96, 1371
MvnI	CGCG	2 cut(s)	1228, 2064
MwoI	GCNNNNNNNGC	7 cut(s)	41, 712, 1283, 1630, 1654, 1759, 2036
NciI	CCSGG	2 cut(s)	248, 1812
NdeI	CATATG	1 cut(s)	1650
NdeII	GATC	6 cut(s)	274, 961, 1020, 1120, 1200, 1881
NlaIII	CATG	6 cut(s)	556, 652, 1048, 1105, 1393, 1828
NlaIV	GGNNCC	6 cut(s)	16, 148, 963, 1252, 1740, 1815
NsiI	ATGCAT	3 cut(s)	235, 586, 1695
NspI	RCATGY	3 cut(s)	556, 652, 1393
PciI	ACATGT	1 cut(s)	648
PciSI	GCTCTTC	2 cut(s)	282, 629
PcsI	WCGNNNNNNNCGW	1 cut(s)	1550
PctI	GAATGC	1 cut(s)	365
PfeI	GAWTC	6 cut(s)	99, 175, 335, 1162, 1291, 1769
PflMI	CCANNNNNTGG	2 cut(s)	1421, 1520
PfoI	TCCNGGA	2 cut(s)	94, 1810
PkrI	GCNGC	1 cut(s)	760
PscI	ACATGT	1 cut(s)	648
PsiI	TTATAA	2 cut(s)	240, 857
Psp124BI	GAGCTC	1 cut(s)	1528
Psp6I	CCWGG	2 cut(s)	94, 1369
PspEI	GGTNACC	1 cut(s)	1856
PspFI	CCCAGC	1 cut(s)	345
PspGI	CCWGG	2 cut(s)	94, 1369
PspN4I	GGNNCC	6 cut(s)	16, 148, 963, 1252, 1740, 1815
PspPI	GGNCC	3 cut(s)	146, 1373, 1814
PstI	CTGCAG	1 cut(s)	1939
PsuI	RGATCY	2 cut(s)	961, 1200
RseI	CAYNNNNRTG	1 cut(s)	777
SacI	GAGCTC	1 cut(s)	1528
SapI	GCTCTTC	2 cut(s)	282, 629
SaqAI	TTAA	2 cut(s)	444, 1920
SatI	GCNGC	1 cut(s)	759
Sau3AI	GATC	6 cut(s)	274, 961, 1020, 1120, 1200, 1881
Sau96I	GGNCC	3 cut(s)	146, 1373, 1814
ScrFI	CCNGG	4 cut(s)	96, 248, 1371, 1812
SduI	GDGCHC	3 cut(s)	325, 1101, 1528
SfaNI	GCATC	9 cut(s)	571, 591, 685, 852, 912, 1330, 1644, 1702, 1816
SfcI	CTRYAG	3 cut(s)	1587, 1877, 1935
SinI	GGWCC	3 cut(s)	146, 1373, 1814
SmiMI	CAYNNNNRTG	1 cut(s)	777
SmlI	CTYRAG	5 cut(s)	536, 629, 1204, 1683, 1991
SmoI	CTYRAG	5 cut(s)	536, 629, 1204, 1683, 1991
SpeI	ACTAGT	1 cut(s)	1172
SsiI	CCGC	1 cut(s)	2064
SspI	AATATT	1 cut(s)	1567
SspMI	CTAG	5 cut(s)	179, 434, 575, 662, 1173
SstI	GAGCTC	1 cut(s)	1528
StyD4I	CCNGG	4 cut(s)	94, 246, 1369, 1810
StyI	CCWWGG	1 cut(s)	66
TaaI	ACNGT	6 cut(s)	400, 658, 669, 1453, 1888, 1909
TaqI	TCGA	6 cut(s)	789, 846, 897, 1402, 1544, 1764
TfiI	GAWTC	6 cut(s)	99, 175, 335, 1162, 1291, 1769
Tru1I	TTAA	2 cut(s)	444, 1920
Tru9I	TTAA	2 cut(s)	444, 1920
TscAI	CASTG	3 cut(s)	843, 1036, 1650
TseI	GCWGC	1 cut(s)	758
TspDTI	ATGAA	6 cut(s)	300, 527, 927, 1118, 1841, 1866
TspGWI	ACGGA	2 cut(s)	159, 1271
TspRI	CASTG	3 cut(s)	843, 1036, 1650
Van91I	CCANNNNNTGG	2 cut(s)	1421, 1520
VpaK11BI	GGWCC	3 cut(s)	146, 1373, 1814
XagI	CCTNNNNNAGG	1 cut(s)	93
XapI	RAATTY	4 cut(s)	257, 417, 1793, 1929
XbaI	TCTAGA	1 cut(s)	178
XceI	RCATGY	3 cut(s)	556, 652, 1393
XmiI	GTMKAC	1 cut(s)	653
XspI	CTAG	5 cut(s)	179, 434, 575, 662, 1173
Zsp2I	ATGCAT	3 cut(s)	235, 586, 1695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.