Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0004915

Physical Location & Seq

Genomic Coordinates Reverse (-)

9034153 .. 9047858

Gene Structure 13706 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG116000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGGAGCCTGGTGCACCTATGGGAAACCCTCCTAGAGCTCCACCAACTATTCCTGGTTCCTTACTGCCACCTCCTCCTATGGTAAATGGCCCTGGGCCTATGCCTCTTGGTGGGGCTCCACCTGCCCCACCTCCACCTCCTGTCAGCAATAACACAATGCACAGCTTTATGTCTAACCAAACTTACAACCAAATAATTAAGTCAAAAGGGAACGCGCGCCATGCTCAGTTCGTGGCGAAGAACGGACCGCAACTTGAACAGTTCGTGGCAGAGAACGGACCCCAATTTGAACAGGTCATAGCTAAGAATCTAGACATAGCAAAATCAAATCTAAGCTTTTTGATTTCCTCAAATCCCTACAATGCATATTATAAGCGCCGGGTGTCTGAATTCCTTGCCCAGCCTGATCAGTCTTATGAAGAGCCAGCTCCAGTTGTAGATGTTGAAGCTGGAGCACCAAAACCTGATTCTCCCTCCCAGCTTAGACCTGAATGCAAAGTGCCTGAACCATCAGAACCCGAAGAGTTTACTGTTCGGCTTCCTGAAGGAATTTGTGGAGAAGAACTAAATGTTATTAAACTCACAGCCCAGTTTGTAGCTCGGAATGGGAAATCGTTTTTGACAGGATTGAGAAGCAGAGAGATGAACAACCCCCTGTTCTATTTTCTCAAGCCTAATCATAGCATGTTCAACTTTTTCACTTCTCTGGCAGATGCATATTCAAAGGTGTTGATGCCACCAGAAGGATTGACAGGGAAGCTCAAGAAGAGCGTGGCAGACATGTCTACTCTGCTAGAACGGTGTGTGCATCGGCTGGAGTGGGAGACTTATCAAAAGCAGGCAAAGCAGAAGGCCGAAGATGAGATTGAGCAGGAAAGGTTACAAATGGCTGCAATTGATTGGCACGATAATGTCTTGGTCGAAGTCATAGACTTTGATGATGTTGAGGATGACTATTTACCTCCTCCACTGAGCATCGAAGAGGTTATAAGGGGAAGCAAAGTTGTTATGGAAGCAGATGATAATGTCGAAATGGATATGGATGAAGAAGAGATGCAACTTGTTGAAGATGGAAAGAGGGTAACAGAGGTGGATCCAGAACAACCACCAATGAGAATTGTGAAGAACTGGAAGAGACTTGAGGAGAGGATGATCCAATCCAGTGCTGAAAGGGACATGACGATTTCCCCTATTACTGGGGAGCTTGTCCCTAACAATGAGATGTCTGAGCACATGAAGATTTCCCTCATTGATCCAAGATACAGAGAACAGAAAGAAAGGATGTTTGCTAAGATTCGGGAGACTAGTCTTGTTCTTGCACAGGACGATGAGATCTTAAGAAACATAGTGAACCTTGCGCAAACCCGTCCTGATATTTTTGGTTCCACGGAGGAGGAAGTTTCAAATGCTGTCAAGGCTGAGATTCAAAATCAAGCGATATCACAGAGTATCAATGGAGAGGATAAGAATGATGATGTGAACAATGAGCGAAGGAACTTTCCTGGTCCAGCAAGACCTGACATGCCTTCAGTCCGACCTCAACCTCCACCAACTGGCCTTCTTCCTCGTATTCCTCCAAGCACGCATCCGGGACCAGTTGACATGAATGTATCTGTTCCTATTGTTGATGAAGGTAACCTCAAAGGCCAACTTCTACAGATCACGGTGCAGTCTTTATCTGAAACTGTTGGCAGTCTGAAAGAGAAAATTTCTGCAGAAATCCAACTTCCAGCAAACAAACAGAAATTGAGTGGCAAATCAGGCTTTCTCAAGGACAATTTTTCACTTGCATATTACAATGTTGGCGCAGGACAAACACTCGCTCTTTCAATAAGAGAGCGCGATGGAAGGAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

619

Amino Acids

69.1

Weight (kDa)

4.98

Isoelectric Point (pI)

52.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	87 - 131	1e-09	Surp module
Surp	PF01805	189 - 240	5.5e-17	Surp module
PRP21_like_P	PF12230	259 - 454	2.8e-46	Pre-mRNA splicing factor PRP21 like protein
ubiquitin	PF00240	558 - 614	3.3e-08	Ubiquitin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06890
malus_domestica	MD10G1329400.v1.1
pyrus_communis	pycom05g32220 pycom10g27920
rosa_chinensis	RchiOBHm_Chr7g0191091
rosa_laevigata	RLG00000004475
rosa_multiflora	Rmu_sc0005151.1_g000002 Rmu_sc0005657.1_g000002 Rmu_sc0005903.1_g000003 Rmu_sc0005903.1_g000004 Rmu_sc0005903.1_g000005 Rmu_sc0013941.1_g000002 Rmu_sc0034959.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264050 Rroxscaffold_5G00351920
rosa_rugosa	Rorug01G0317000 Rorug01G0317100
rosa_samantha	Rh1AG145900 Rh1AG325300 Rh3BG312100 Rh4AG053700 Rh4BG051600 Rh4DG247700 Rh7AG116000 Rh7BG117500 Rh7CG120900 Rh7DG298100
rosa_wichuraiana	Rw1G028860 Rw7G010070 Rw7G010160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	372, 989
AarI	CACCTGC	1 cut(s)	130
Acc16I	TGCGCA	1 cut(s)	1359
Acc36I	ACCTGC	1 cut(s)	130
AccB7I	CCANNNNNTGG	1 cut(s)	1553
AccI	GTMKAC	1 cut(s)	785
AccII	CGCG	3 cut(s)	215, 217, 1842
AciI	CCGC	1 cut(s)	248
AclWI	GGATC	4 cut(s)	1088, 1101, 1147, 1247
AcsI	RAATTY	3 cut(s)	389, 549, 1707
AcuI	CTGAAG	2 cut(s)	564, 1512
AfiI	CCNNNNNNNGG	4 cut(s)	110, 743, 1196, 1553
AflII	CTTAAG	1 cut(s)	1336
AflIII	ACRYGT	1 cut(s)	780
AgsI	TTSAA	9 cut(s)	257, 290, 446, 691, 723, 1067, 1404, 1427, 1830
AhlI	ACTAGT	1 cut(s)	1304
AjnI	CCWGG	4 cut(s)	7, 52, 91, 1501
AjuI	GAANNNNNNNTTGG	2 cut(s)	451, 483
Alw21I	GWGCWC	4 cut(s)	16, 40, 457, 1233
Alw26I	GTCTC	3 cut(s)	818, 1129, 1295
Alw44I	GTGCAC	1 cut(s)	12
AlwI	GGATC	4 cut(s)	1088, 1101, 1147, 1247
AoxI	GGCC	5 cut(s)	88, 95, 852, 1555, 1645
ApaLI	GTGCAC	1 cut(s)	12
ApeKI	GCWGC	1 cut(s)	890
ApoI	RAATTY	3 cut(s)	389, 549, 1707
AspLEI	GCGC	6 cut(s)	217, 219, 378, 1360, 1808, 1842
AspS9I	GGNCC	6 cut(s)	89, 95, 245, 278, 1505, 1592
AsuC2I	CCSGG	2 cut(s)	380, 1590
AvaII	GGWCC	4 cut(s)	245, 278, 1505, 1592
BaeGI	GKGCMC	1 cut(s)	16
BamHI	GGATCC	1 cut(s)	1093
BanII	GRGCYC	2 cut(s)	40, 118
Bbv12I	GWGCWC	4 cut(s)	16, 40, 457, 1233
BbvI	GCAGC	1 cut(s)	877
BccI	CCATC	3 cut(s)	517, 1064, 1838
BciT130I	CCWGG	4 cut(s)	9, 54, 93, 1503
BclI	TGATCA	1 cut(s)	406
BcnI	CCSGG	2 cut(s)	380, 1590
BcoDI	GTCTC	3 cut(s)	818, 1129, 1295
BcuI	ACTAGT	1 cut(s)	1304
BfaI	CTAG	4 cut(s)	33, 311, 794, 1305
BfmI	CTRYAG	2 cut(s)	1655, 1713
BfoI	RGCGCY	1 cut(s)	379
BfrI	CTTAAG	1 cut(s)	1336
BfuAI	ACCTGC	1 cut(s)	130
BglII	AGATCT	1 cut(s)	1332
BisI	GCNGC	1 cut(s)	891
BlsI	GCNGC	1 cut(s)	892
Bme1390I	CCNGG	6 cut(s)	9, 54, 93, 380, 1503, 1590
Bme18I	GGWCC	4 cut(s)	245, 278, 1505, 1592
BmgT120I	GGNCC	6 cut(s)	89, 95, 245, 278, 1505, 1592
BmiI	GGNNCC	7 cut(s)	6, 58, 117, 280, 1095, 1384, 1593
BmrFI	CCNGG	6 cut(s)	9, 54, 93, 380, 1503, 1590
BmrI	ACTGGG	2 cut(s)	583, 1206
BmsI	GCATC	6 cut(s)	703, 723, 817, 984, 1044, 1594
BmuI	ACTGGG	2 cut(s)	583, 1206
BpmI	CTGGAG	3 cut(s)	414, 471, 836
BpuEI	CTTGAG	4 cut(s)	653, 746, 1160, 1754
BpuMI	CCSGG	2 cut(s)	380, 1590
BsaJI	CCNNGG	3 cut(s)	91, 92, 1386
Bsc4I	CCNNNNNNNGG	4 cut(s)	110, 743, 1196, 1553
Bse1I	ACTGG	7 cut(s)	431, 589, 1133, 1161, 1201, 1558, 1595
BseBI	CCWGG	4 cut(s)	9, 54, 93, 1503
BseDI	CCNNGG	3 cut(s)	91, 92, 1386
BseGI	GGATG	5 cut(s)	955, 1048, 1155, 1287, 1585
BseLI	CCNNNNNNNGG	4 cut(s)	110, 743, 1196, 1553
BseMII	CTCAG	4 cut(s)	239, 962, 1218, 1410
BseNI	ACTGG	7 cut(s)	431, 589, 1133, 1161, 1201, 1558, 1595
BsePI	GCGCGC	1 cut(s)	215
BseRI	GAGGAG	4 cut(s)	63, 954, 1157, 1406
BseSI	GKGCMC	1 cut(s)	16
BseXI	GCAGC	1 cut(s)	877
BseYI	CCCAGC	2 cut(s)	399, 477
BsgI	GTGCAG	1 cut(s)	1688
Bsh1236I	CGCG	3 cut(s)	215, 217, 1842
BshFI	GGCC	5 cut(s)	90, 97, 854, 1557, 1647
BsiHKAI	GWGCWC	4 cut(s)	16, 40, 457, 1233
BsiSI	CCGG	2 cut(s)	379, 1589
BslFI	GGGAC	3 cut(s)	1187, 1193, 1605
BslI	CCNNNNNNNGG	4 cut(s)	110, 743, 1196, 1553
BsmAI	GTCTC	3 cut(s)	818, 1129, 1295
BsmFI	GGGAC	3 cut(s)	1187, 1193, 1605
BsmI	GAATGC	1 cut(s)	497
BsnI	GGCC	5 cut(s)	90, 97, 854, 1557, 1647
Bsp1286I	GDGCHC	5 cut(s)	16, 40, 118, 457, 1233
Bsp143I	GATC	6 cut(s)	406, 1093, 1152, 1252, 1332, 1659
BspACI	CCGC	1 cut(s)	248
BspANI	GGCC	5 cut(s)	90, 97, 854, 1557, 1647
BspCNI	CTCAG	4 cut(s)	238, 963, 1219, 1411
BspFNI	CGCG	3 cut(s)	215, 217, 1842
BspLI	GGNNCC	7 cut(s)	6, 58, 117, 280, 1095, 1384, 1593
BspMAI	CTGCAG	1 cut(s)	1717
BspMI	ACCTGC	1 cut(s)	130
BspPI	GGATC	4 cut(s)	1088, 1101, 1147, 1247
BspQI	GCTCTTC	2 cut(s)	414, 761
BspTI	CTTAAG	1 cut(s)	1336
BsrI	ACTGG	7 cut(s)	431, 589, 1133, 1161, 1201, 1558, 1595
BssECI	CCNNGG	3 cut(s)	91, 92, 1386
BssHII	GCGCGC	1 cut(s)	215
BssMI	GATC	6 cut(s)	406, 1093, 1152, 1252, 1332, 1659
Bst2UI	CCWGG	4 cut(s)	9, 54, 93, 1503
Bst4CI	ACNGT	5 cut(s)	261, 532, 801, 1666, 1687
Bst6I	CTCTTC	7 cut(s)	414, 516, 761, 975, 1044, 1127, 1847
BstAFI	CTTAAG	1 cut(s)	1336
BstC8I	GCNNGC	4 cut(s)	217, 426, 840, 1583
BstDEI	CTNAG	8 cut(s)	225, 303, 332, 482, 971, 1227, 1290, 1419
BstDSI	CCRYGG	1 cut(s)	1386
BstEII	GGTNACC	1 cut(s)	1634
BstF5I	GGATG	5 cut(s)	955, 1048, 1155, 1287, 1585
BstFNI	CGCG	3 cut(s)	215, 217, 1842
BstH2I	RGCGCY	1 cut(s)	379
BstHHI	GCGC	6 cut(s)	217, 219, 378, 1360, 1808, 1842
BstKTI	GATC	6 cut(s)	409, 1096, 1155, 1255, 1335, 1662
BstMAI	GTCTC	3 cut(s)	818, 1129, 1295
BstMBI	GATC	6 cut(s)	406, 1093, 1152, 1252, 1332, 1659
BstMWI	GCNNNNNNNGC	5 cut(s)	122, 221, 844, 1415, 1761
BstNI	CCWGG	4 cut(s)	9, 54, 93, 1503
BstNSI	RCATGY	3 cut(s)	688, 784, 1525
BstPI	GGTNACC	1 cut(s)	1634
BstSCI	CCNGG	6 cut(s)	7, 52, 91, 378, 1501, 1588
BstSFI	CTRYAG	2 cut(s)	1655, 1713
BstSLI	GKGCMC	1 cut(s)	16
BstUI	CGCG	3 cut(s)	215, 217, 1842
BstV1I	GCAGC	1 cut(s)	877
BstX2I	RGATCY	2 cut(s)	1093, 1332
BstYI	RGATCY	2 cut(s)	1093, 1332
BsuRI	GGCC	5 cut(s)	90, 97, 854, 1557, 1647
BtgI	CCRYGG	1 cut(s)	1386
BtsCI	GGATG	5 cut(s)	955, 1048, 1155, 1287, 1585
BtsIMutI	CAGTG	2 cut(s)	968, 1168
BveI	ACCTGC	1 cut(s)	130
Cac8I	GCNNGC	4 cut(s)	217, 426, 840, 1583
CfoI	GCGC	6 cut(s)	217, 219, 378, 1360, 1808, 1842
Cfr13I	GGNCC	6 cut(s)	89, 95, 245, 278, 1505, 1592
CpoI	CGGWCCG	1 cut(s)	245
CspI	CGGWCCG	1 cut(s)	245
CviAII	CATG	7 cut(s)	221, 685, 781, 1177, 1234, 1522, 1603
DdeI	CTNAG	8 cut(s)	225, 303, 332, 482, 971, 1227, 1290, 1419
DpnI	GATC	6 cut(s)	408, 1095, 1154, 1254, 1334, 1661
DpnII	GATC	6 cut(s)	406, 1093, 1152, 1252, 1332, 1659
Eam1104I	CTCTTC	7 cut(s)	414, 516, 761, 975, 1044, 1127, 1847
EarI	CTCTTC	7 cut(s)	414, 516, 761, 975, 1044, 1127, 1847
Ecl136II	GAGCTC	1 cut(s)	38
Eco24I	GRGCYC	2 cut(s)	40, 118
Eco32I	GATATC	1 cut(s)	1440
Eco47I	GGWCC	4 cut(s)	245, 278, 1505, 1592
Eco53kI	GAGCTC	1 cut(s)	38
Eco57I	CTGAAG	2 cut(s)	564, 1512
Eco91I	GGTNACC	1 cut(s)	1634
EcoICRI	GAGCTC	1 cut(s)	38
EcoO65I	GGTNACC	1 cut(s)	1634
EcoRI	GAATTC	1 cut(s)	389
EcoRII	CCWGG	4 cut(s)	7, 52, 91, 1501
EcoRV	GATATC	1 cut(s)	1440
EcoT22I	ATGCAT	2 cut(s)	367, 718
EcoT38I	GRGCYC	2 cut(s)	40, 118
FaeI	CATG	7 cut(s)	224, 688, 784, 1180, 1237, 1525, 1606
FalI	AAGNNNNNCTT	2 cut(s)	1635, 1667
FaqI	GGGAC	3 cut(s)	1187, 1193, 1605
FatI	CATG	7 cut(s)	220, 684, 780, 1176, 1233, 1521, 1602
FbaI	TGATCA	1 cut(s)	406
FblI	GTMKAC	1 cut(s)	785
Fnu4HI	GCNGC	1 cut(s)	891
FokI	GGATG	5 cut(s)	962, 1055, 1162, 1294, 1572
FriOI	GRGCYC	2 cut(s)	40, 118
Fsp4HI	GCNGC	1 cut(s)	891
FspBI	CTAG	4 cut(s)	33, 311, 794, 1305
FspI	TGCGCA	1 cut(s)	1359
GlaI	GCGC	6 cut(s)	216, 218, 377, 1359, 1807, 1841
GluI	GCNGC	1 cut(s)	891
GsaI	CCCAGC	2 cut(s)	403, 481
GsuI	CTGGAG	3 cut(s)	414, 471, 836
HaeII	RGCGCY	1 cut(s)	379
HaeIII	GGCC	5 cut(s)	90, 97, 854, 1557, 1647
HapII	CCGG	2 cut(s)	379, 1589
HhaI	GCGC	6 cut(s)	217, 219, 378, 1360, 1808, 1842
Hin1II	CATG	7 cut(s)	224, 688, 784, 1180, 1237, 1525, 1606
Hin6I	GCGC	6 cut(s)	215, 217, 376, 1358, 1806, 1840
HinP1I	GCGC	6 cut(s)	215, 217, 376, 1358, 1806, 1840
HincII	GTYRAC	1 cut(s)	1600
HindII	GTYRAC	1 cut(s)	1600
HindIII	AAGCTT	1 cut(s)	334
HinfI	GANTC	4 cut(s)	307, 467, 1294, 1423
HpaII	CCGG	2 cut(s)	379, 1589
Hpy166II	GTNNAC	6 cut(s)	14, 528, 786, 1351, 1480, 1600
Hpy188I	TCNGA	7 cut(s)	388, 514, 603, 1228, 1535, 1681, 1698
Hpy188III	TCNNGA	6 cut(s)	311, 542, 763, 1097, 1298, 1370
Hpy8I	GTNNAC	6 cut(s)	14, 528, 786, 1351, 1480, 1600
HpyAV	CCTTC	8 cut(s)	539, 737, 844, 1485, 1536, 1568, 1625, 1842
HpyCH4III	ACNGT	5 cut(s)	261, 532, 801, 1666, 1687
HpyF10VI	GCNNNNNNNGC	5 cut(s)	122, 221, 844, 1415, 1761
HpyF3I	CTNAG	8 cut(s)	225, 303, 332, 482, 971, 1227, 1290, 1419
Hsp92II	CATG	7 cut(s)	224, 688, 784, 1180, 1237, 1525, 1606
HspAI	GCGC	6 cut(s)	215, 217, 376, 1358, 1806, 1840
Ksp22I	TGATCA	1 cut(s)	406
Kzo9I	GATC	6 cut(s)	406, 1093, 1152, 1252, 1332, 1659
LguI	GCTCTTC	2 cut(s)	414, 761
LmnI	GCTCC	6 cut(s)	4, 43, 121, 433, 452, 1201
Lsp1109I	GCAGC	1 cut(s)	877
LweI	GCATC	6 cut(s)	703, 723, 817, 984, 1044, 1594
MaeI	CTAG	4 cut(s)	33, 311, 794, 1305
MaeIII	GTNAC	3 cut(s)	879, 1081, 1634
MalI	GATC	6 cut(s)	408, 1095, 1154, 1254, 1334, 1661
MboI	GATC	6 cut(s)	406, 1093, 1152, 1252, 1332, 1659
MfeI	CAATTG	1 cut(s)	894
MflI	RGATCY	2 cut(s)	1093, 1332
MhlI	GDGCHC	5 cut(s)	16, 40, 118, 457, 1233
MluCI	AATT	9 cut(s)	195, 284, 389, 549, 894, 1116, 1707, 1745, 1777
MmeI	TCCRAC	2 cut(s)	1558, 1747
Mph1103I	ATGCAT	2 cut(s)	367, 718
MseI	TTAA	3 cut(s)	198, 576, 1337
MslI	CAYNNNNRTG	1 cut(s)	909
MspCI	CTTAAG	1 cut(s)	1336
MspI	CCGG	2 cut(s)	379, 1589
MspR9I	CCNGG	6 cut(s)	9, 54, 93, 380, 1503, 1590
MunI	CAATTG	1 cut(s)	894
Mva1269I	GAATGC	1 cut(s)	497
MvaI	CCWGG	4 cut(s)	9, 54, 93, 1503
MvnI	CGCG	3 cut(s)	215, 217, 1842
MwoI	GCNNNNNNNGC	5 cut(s)	122, 221, 844, 1415, 1761
NciI	CCSGG	2 cut(s)	380, 1590
NdeII	GATC	6 cut(s)	406, 1093, 1152, 1252, 1332, 1659
NlaIII	CATG	7 cut(s)	224, 688, 784, 1180, 1237, 1525, 1606
NlaIV	GGNNCC	7 cut(s)	6, 58, 117, 280, 1095, 1384, 1593
NsbI	TGCGCA	1 cut(s)	1359
NsiI	ATGCAT	2 cut(s)	367, 718
NspI	RCATGY	3 cut(s)	688, 784, 1525
PaqCI	CACCTGC	1 cut(s)	130
PasI	CCCWGGG	1 cut(s)	92
PauI	GCGCGC	1 cut(s)	215
PciI	ACATGT	1 cut(s)	780
PciSI	GCTCTTC	2 cut(s)	414, 761
PctI	GAATGC	1 cut(s)	497
PfeI	GAWTC	4 cut(s)	307, 467, 1294, 1423
PflMI	CCANNNNNTGG	1 cut(s)	1553
PfoI	TCCNGGA	1 cut(s)	1588
PkrI	GCNGC	1 cut(s)	892
PscI	ACATGT	1 cut(s)	780
PsiI	TTATAA	2 cut(s)	372, 989
Psp124BI	GAGCTC	1 cut(s)	40
Psp6I	CCWGG	4 cut(s)	7, 52, 91, 1501
PspEI	GGTNACC	1 cut(s)	1634
PspFI	CCCAGC	2 cut(s)	399, 477
PspGI	CCWGG	4 cut(s)	7, 52, 91, 1501
PspN4I	GGNNCC	7 cut(s)	6, 58, 117, 280, 1095, 1384, 1593
PspPI	GGNCC	6 cut(s)	89, 95, 245, 278, 1505, 1592
PstI	CTGCAG	1 cut(s)	1717
PsuI	RGATCY	2 cut(s)	1093, 1332
PteI	GCGCGC	1 cut(s)	215
RseI	CAYNNNNRTG	1 cut(s)	909
Rsr2I	CGGWCCG	1 cut(s)	245
RsrII	CGGWCCG	1 cut(s)	245
SacI	GAGCTC	1 cut(s)	40
SapI	GCTCTTC	2 cut(s)	414, 761
SaqAI	TTAA	3 cut(s)	198, 576, 1337
SatI	GCNGC	1 cut(s)	891
Sau3AI	GATC	6 cut(s)	406, 1093, 1152, 1252, 1332, 1659
Sau96I	GGNCC	6 cut(s)	89, 95, 245, 278, 1505, 1592
ScrFI	CCNGG	6 cut(s)	9, 54, 93, 380, 1503, 1590
SduI	GDGCHC	5 cut(s)	16, 40, 118, 457, 1233
SfaNI	GCATC	6 cut(s)	703, 723, 817, 984, 1044, 1594
SfcI	CTRYAG	2 cut(s)	1655, 1713
SinI	GGWCC	4 cut(s)	245, 278, 1505, 1592
SmiMI	CAYNNNNRTG	1 cut(s)	909
SmlI	CTYRAG	5 cut(s)	668, 761, 1139, 1336, 1769
SmoI	CTYRAG	5 cut(s)	668, 761, 1139, 1336, 1769
SpeI	ACTAGT	1 cut(s)	1304
Sse9I	AATT	9 cut(s)	195, 284, 389, 549, 894, 1116, 1707, 1745, 1777
SsiI	CCGC	1 cut(s)	248
SspMI	CTAG	4 cut(s)	33, 311, 794, 1305
SstI	GAGCTC	1 cut(s)	40
StyD4I	CCNGG	6 cut(s)	7, 52, 91, 378, 1501, 1588
TaaI	ACNGT	5 cut(s)	261, 532, 801, 1666, 1687
TaqI	TCGA	3 cut(s)	921, 978, 1029
TasI	AATT	9 cut(s)	195, 284, 389, 549, 894, 1116, 1707, 1745, 1777
TfiI	GAWTC	4 cut(s)	307, 467, 1294, 1423
Tru1I	TTAA	3 cut(s)	198, 576, 1337
Tru9I	TTAA	3 cut(s)	198, 576, 1337
TscAI	CASTG	2 cut(s)	975, 1168
TseI	GCWGC	1 cut(s)	890
TspDTI	ATGAA	6 cut(s)	432, 659, 1059, 1250, 1619, 1644
TspGWI	ACGGA	3 cut(s)	258, 291, 1403
TspRI	CASTG	2 cut(s)	975, 1168
Van91I	CCANNNNNTGG	1 cut(s)	1553
Vha464I	CTTAAG	1 cut(s)	1336
VneI	GTGCAC	1 cut(s)	12
VpaK11BI	GGWCC	4 cut(s)	245, 278, 1505, 1592
XapI	RAATTY	3 cut(s)	389, 549, 1707
XbaI	TCTAGA	1 cut(s)	310
XceI	RCATGY	3 cut(s)	688, 784, 1525
XmiI	GTMKAC	1 cut(s)	785
XspI	CTAG	4 cut(s)	33, 311, 794, 1305
Zsp2I	ATGCAT	2 cut(s)	367, 718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.