RLG00000010938

glyoxalase I family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0003849
Physical Location & Seq
Reverse (-)
5525217 .. 5526270
1054 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010938

Sequence Viewer

Length: 342 bp
ATGGCAGCGGCGTCGTTTAGGTGGATACTGCAATTGCACAAGGACGTACCAAAAGCCGCTCGGTTCTACTCCGAAGGCTTGGATTTCACCGTCAACGTCTGCACTGTCCGCTGGGCCGAGCTTCAGTCCGGCCCACTCAAACTTGCCCTCATGCAATCCCCCAATGACCATGCCATGCAGAAGGGCTACTCTTCCCTTGTATCTTTCACGGTGTCGGACATTAACCAAACAGTGACGAAGCTAATGGCATTAGGAGCTGAGCTAGACGGTCCTATCAAATACGAAATCCATGGGAAGGTGATGACTGCTAGATTTCTGAGGACACCCGTTCACGCATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyoxalase

Protein Analysis

114

Amino Acids

12.61

Weight (kDa)

9.21

Isoelectric Point (pI)

47.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxalase PF00903 8 - 103 1.2e-08 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 59
AciI CCGC 3 cut(s) 8, 57, 109
AcuI CTGAAG 1 cut(s) 107
AcyI GRCGYC 1 cut(s) 11
AfaI GTAC 1 cut(s) 48
AfiI CCNNNNNNNGG 1 cut(s) 295
AluBI AGCT 4 cut(s) 121, 241, 257, 262
AluI AGCT 4 cut(s) 121, 241, 257, 262
AoxI GGCC 2 cut(s) 114, 130
ApeKI GCWGC 1 cut(s) 5
AspS9I GGNCC 3 cut(s) 114, 131, 269
AsuHPI GGTGA 2 cut(s) 79, 310
AvaII GGWCC 1 cut(s) 269
BbvI GCAGC 1 cut(s) 17
BcgI CGANNNNNNTGC 1 cut(s) 28
BciVI GTATCC 1 cut(s) 18
BfaI CTAG 2 cut(s) 263, 309
BfuI GTATCC 1 cut(s) 18
BisI GCNGC 3 cut(s) 6, 9, 57
BlpI GCTNAGC 1 cut(s) 258
BlsI GCNGC 3 cut(s) 7, 10, 58
Bme18I GGWCC 1 cut(s) 269
BmgT120I GGNCC 3 cut(s) 114, 131, 269
Bpu1102I GCTNAGC 1 cut(s) 258
BsaHI GRCGYC 1 cut(s) 11
BsaJI CCNNGG 1 cut(s) 289
Bsc4I CCNNNNNNNGG 1 cut(s) 295
BseDI CCNNGG 1 cut(s) 289
BseLI CCNNNNNNNGG 1 cut(s) 295
BseMII CTCAG 2 cut(s) 249, 308
BseXI GCAGC 1 cut(s) 17
BseYI CCCAGC 1 cut(s) 111
BsgI GTGCAG 1 cut(s) 85
BshFI GGCC 2 cut(s) 116, 132
BsiSI CCGG 1 cut(s) 129
BslI CCNNNNNNNGG 1 cut(s) 295
BsnI GGCC 2 cut(s) 116, 132
Bsp1720I GCTNAGC 1 cut(s) 258
Bsp19I CCATGG 1 cut(s) 289
BspACI CCGC 3 cut(s) 8, 57, 109
BspANI GGCC 2 cut(s) 116, 132
BspCNI CTCAG 2 cut(s) 250, 309
BsrBI CCGCTC 1 cut(s) 59
BssECI CCNNGG 1 cut(s) 289
BssNI GRCGYC 1 cut(s) 11
BssT1I CCWWGG 1 cut(s) 289
Bst4CI ACNGT 5 cut(s) 91, 106, 211, 232, 269
Bst6I CTCTTC 1 cut(s) 196
BstACI GRCGYC 1 cut(s) 11
BstDEI CTNAG 2 cut(s) 258, 317
BstDSI CCRYGG 1 cut(s) 289
BstMWI GCNNNNNNNGC 2 cut(s) 108, 254
BstV1I GCAGC 1 cut(s) 17
BsuI GTATCC 1 cut(s) 18
BsuRI GGCC 2 cut(s) 116, 132
BtgI CCRYGG 1 cut(s) 289
BtsIMutI CAGTG 2 cut(s) 102, 237
Cfr13I GGNCC 3 cut(s) 114, 131, 269
Csp6I GTAC 1 cut(s) 47
CviAII CATG 4 cut(s) 151, 170, 175, 290
CviJI RGCY 9 cut(s) 56, 78, 116, 121, 132, 186, 241, 257, 262
CviKI_1 RGCY 9 cut(s) 56, 78, 116, 121, 132, 186, 241, 257, 262
CviQI GTAC 1 cut(s) 47
DdeI CTNAG 2 cut(s) 258, 317
Eam1104I CTCTTC 1 cut(s) 196
EarI CTCTTC 1 cut(s) 196
Eco130I CCWWGG 1 cut(s) 289
Eco47I GGWCC 1 cut(s) 269
Eco57I CTGAAG 1 cut(s) 107
EcoT14I CCWWGG 1 cut(s) 289
ErhI CCWWGG 1 cut(s) 289
FaeI CATG 4 cut(s) 154, 173, 178, 293
FaiI YATR 4 cut(s) 152, 171, 176, 291
FatI CATG 4 cut(s) 150, 169, 174, 289
Fnu4HI GCNGC 3 cut(s) 6, 9, 57
Fsp4HI GCNGC 3 cut(s) 6, 9, 57
FspBI CTAG 2 cut(s) 263, 309
GluI GCNGC 3 cut(s) 6, 9, 57
GsaI CCCAGC 1 cut(s) 115
HaeIII GGCC 2 cut(s) 116, 132
HapII CCGG 1 cut(s) 129
Hin1I GRCGYC 1 cut(s) 11
Hin1II CATG 4 cut(s) 154, 173, 178, 293
HincII GTYRAC 1 cut(s) 94
HindII GTYRAC 1 cut(s) 94
HpaII CCGG 1 cut(s) 129
HphI GGTGA 2 cut(s) 79, 310
Hpy166II GTNNAC 2 cut(s) 94, 331
Hpy188I TCNGA 3 cut(s) 73, 217, 318
Hpy8I GTNNAC 2 cut(s) 94, 331
Hpy99I CGWCG 1 cut(s) 16
HpyAV CCTTC 3 cut(s) 68, 175, 289
HpyCH4III ACNGT 5 cut(s) 91, 106, 211, 232, 269
HpyCH4IV ACGT 2 cut(s) 45, 96
HpyCH4V TGCA 5 cut(s) 31, 37, 102, 154, 178
HpyF10VI GCNNNNNNNGC 2 cut(s) 108, 254
HpyF3I CTNAG 2 cut(s) 258, 317
HpySE526I ACGT 2 cut(s) 45, 96
Hsp92I GRCGYC 1 cut(s) 11
Hsp92II CATG 4 cut(s) 154, 173, 178, 293
LmnI GCTCC 1 cut(s) 254
LpnPI CCDG 2 cut(s) 97, 142
Lsp1109I GCAGC 1 cut(s) 17
MaeI CTAG 2 cut(s) 263, 309
MaeII ACGT 2 cut(s) 45, 96
MaeIII GTNAC 1 cut(s) 232
MbiI CCGCTC 1 cut(s) 59
MboII GAAGA 1 cut(s) 183
MfeI CAATTG 1 cut(s) 32
MluCI AATT 1 cut(s) 32
MmeI TCCRAC 1 cut(s) 195
MnlI CCTC 2 cut(s) 158, 312
MseI TTAA 1 cut(s) 222
MspA1I CMGCKG 2 cut(s) 8, 111
MspI CCGG 1 cut(s) 129
MunI CAATTG 1 cut(s) 32
MwoI GCNNNNNNNGC 2 cut(s) 108, 254
NcoI CCATGG 1 cut(s) 289
NlaIII CATG 4 cut(s) 154, 173, 178, 293
NmeAIII GCCGAG 1 cut(s) 142
NmuCI GTSAC 1 cut(s) 232
PkrI GCNGC 3 cut(s) 7, 10, 58
PspFI CCCAGC 1 cut(s) 111
PspPI GGNCC 3 cut(s) 114, 131, 269
RsaI GTAC 1 cut(s) 48
RsaNI GTAC 1 cut(s) 47
SaqAI TTAA 1 cut(s) 222
SatI GCNGC 3 cut(s) 6, 9, 57
Sau96I GGNCC 3 cut(s) 114, 131, 269
SetI ASST 8 cut(s) 23, 48, 99, 123, 243, 259, 264, 300
SinI GGWCC 1 cut(s) 269
Sse9I AATT 1 cut(s) 32
SsiI CCGC 3 cut(s) 8, 57, 109
SspMI CTAG 2 cut(s) 263, 309
StyI CCWWGG 1 cut(s) 289
TaaI ACNGT 5 cut(s) 91, 106, 211, 232, 269
TaiI ACGT 2 cut(s) 48, 99
TasI AATT 1 cut(s) 32
TauI GCSGC 2 cut(s) 11, 59
Tru1I TTAA 1 cut(s) 222
Tru9I TTAA 1 cut(s) 222
TscAI CASTG 2 cut(s) 109, 237
TseFI GTSAC 1 cut(s) 232
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 1 cut(s) 232
TspRI CASTG 2 cut(s) 109, 237
VpaK11BI GGWCC 1 cut(s) 269
XspI CTAG 2 cut(s) 263, 309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.