Rh6CG461100

glyoxalase I family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0003849
Physical Location & Seq
Forward (+)
63500766 .. 63502435
1670 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG461100.1

Sequence Viewer

Length: 402 bp
ATGCCAATATTATTCAAGTCTCCAAAAGCCACCAACGGATGGAGAGAAATGGCAGCGGCGTCGTTTAGGTGGATACTGCAATTGCACAAGGACGTCCCAAAAGCCGCTCGGTTCTACTCCGAAGGCTTGGATTTCACCGTCAACGTCTGCACTCTCCGCTGGGCCGAGCTTCAGTCCGGCCCACTCAAACTTGCCCTCATGCAATCCCCCAATGACCATGCCATGCAGAAGGGCTACTCTTCCCTTGTATCTTTCACGGTGTCGGACATTAACCAAACAGTGACGAAGCTAATGGCATTAGGAGCTGAGCTAGATGGTCCTATCAAATACGAAATCCATGGGAAGGTTGCTGCCCTGCGATGTATTGATGGGCACATGTTAGGCCTCTATGAACCAGCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyoxalase

Protein Analysis

133

Amino Acids

14.77

Weight (kDa)

8.58

Isoelectric Point (pI)

49.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxalase PF00903 24 - 115 1.4e-07 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 96
AccB7I CCANNNNNTGG 1 cut(s) 39
AccBSI CCGCTC 1 cut(s) 107
AciI CCGC 3 cut(s) 56, 105, 157
AcuI CTGAAG 1 cut(s) 155
AcyI GRCGYC 2 cut(s) 59, 93
AfiI CCNNNNNNNGG 2 cut(s) 39, 343
AflIII ACRYGT 1 cut(s) 375
AgsI TTSAA 1 cut(s) 16
AluBI AGCT 4 cut(s) 169, 289, 305, 310
AluI AGCT 4 cut(s) 169, 289, 305, 310
Alw26I GTCTC 1 cut(s) 24
AoxI GGCC 3 cut(s) 162, 178, 382
ApeKI GCWGC 2 cut(s) 53, 350
AspS9I GGNCC 3 cut(s) 162, 179, 317
AsuHPI GGTGA 1 cut(s) 127
AvaII GGWCC 1 cut(s) 317
BaeGI GKGCMC 1 cut(s) 375
BbvI GCAGC 2 cut(s) 65, 337
BccI CCATC 3 cut(s) 33, 308, 362
BcgI CGANNNNNNTGC 2 cut(s) 42, 76
BciVI GTATCC 1 cut(s) 66
BcoDI GTCTC 1 cut(s) 24
BfaI CTAG 1 cut(s) 311
BfuI GTATCC 1 cut(s) 66
BisI GCNGC 4 cut(s) 54, 57, 105, 351
BlpI GCTNAGC 1 cut(s) 306
BlsI GCNGC 4 cut(s) 55, 58, 106, 352
Bme18I GGWCC 1 cut(s) 317
BmgT120I GGNCC 3 cut(s) 162, 179, 317
Bpu1102I GCTNAGC 1 cut(s) 306
BsaHI GRCGYC 2 cut(s) 59, 93
BsaJI CCNNGG 1 cut(s) 337
Bsc4I CCNNNNNNNGG 2 cut(s) 39, 343
BseDI CCNNGG 1 cut(s) 337
BseGI GGATG 1 cut(s) 44
BseLI CCNNNNNNNGG 2 cut(s) 39, 343
BseMII CTCAG 1 cut(s) 297
BseSI GKGCMC 1 cut(s) 375
BseXI GCAGC 2 cut(s) 65, 337
BseYI CCCAGC 1 cut(s) 159
BsgI GTGCAG 1 cut(s) 133
BshFI GGCC 3 cut(s) 164, 180, 384
BsiSI CCGG 1 cut(s) 177
BslFI GGGAC 1 cut(s) 80
BslI CCNNNNNNNGG 2 cut(s) 39, 343
BsmAI GTCTC 1 cut(s) 24
BsmFI GGGAC 1 cut(s) 80
BsnI GGCC 3 cut(s) 164, 180, 384
Bsp1286I GDGCHC 1 cut(s) 375
Bsp1720I GCTNAGC 1 cut(s) 306
Bsp19I CCATGG 1 cut(s) 337
BspACI CCGC 3 cut(s) 56, 105, 157
BspANI GGCC 3 cut(s) 164, 180, 384
BspCNI CTCAG 1 cut(s) 298
BsrBI CCGCTC 1 cut(s) 107
BssECI CCNNGG 1 cut(s) 337
BssNI GRCGYC 2 cut(s) 59, 93
BssT1I CCWWGG 1 cut(s) 337
Bst4CI ACNGT 3 cut(s) 139, 259, 280
Bst6I CTCTTC 1 cut(s) 244
BstACI GRCGYC 2 cut(s) 59, 93
BstDEI CTNAG 1 cut(s) 306
BstDSI CCRYGG 1 cut(s) 337
BstF5I GGATG 1 cut(s) 44
BstMAI GTCTC 1 cut(s) 24
BstMWI GCNNNNNNNGC 2 cut(s) 156, 302
BstNSI RCATGY 1 cut(s) 379
BstSLI GKGCMC 1 cut(s) 375
BstV1I GCAGC 2 cut(s) 65, 337
BsuI GTATCC 1 cut(s) 66
BsuRI GGCC 3 cut(s) 164, 180, 384
BtgI CCRYGG 1 cut(s) 337
BtgZI GCGATG 1 cut(s) 373
BtsCI GGATG 1 cut(s) 44
BtsIMutI CAGTG 1 cut(s) 285
Cfr13I GGNCC 3 cut(s) 162, 179, 317
CseI GACGC 1 cut(s) 48
CviAII CATG 5 cut(s) 199, 218, 223, 338, 376
DdeI CTNAG 1 cut(s) 306
Eam1104I CTCTTC 1 cut(s) 244
EarI CTCTTC 1 cut(s) 244
Eco130I CCWWGG 1 cut(s) 337
Eco147I AGGCCT 1 cut(s) 384
Eco47I GGWCC 1 cut(s) 317
Eco57I CTGAAG 1 cut(s) 155
EcoT14I CCWWGG 1 cut(s) 337
ErhI CCWWGG 1 cut(s) 337
FaeI CATG 5 cut(s) 202, 221, 226, 341, 379
FaiI YATR 6 cut(s) 200, 219, 224, 339, 377, 390
FaqI GGGAC 1 cut(s) 80
FatI CATG 5 cut(s) 198, 217, 222, 337, 375
Fnu4HI GCNGC 4 cut(s) 54, 57, 105, 351
FokI GGATG 1 cut(s) 51
Fsp4HI GCNGC 4 cut(s) 54, 57, 105, 351
FspBI CTAG 1 cut(s) 311
GluI GCNGC 4 cut(s) 54, 57, 105, 351
GsaI CCCAGC 1 cut(s) 163
HaeIII GGCC 3 cut(s) 164, 180, 384
HapII CCGG 1 cut(s) 177
HgaI GACGC 1 cut(s) 48
Hin1I GRCGYC 2 cut(s) 59, 93
Hin1II CATG 5 cut(s) 202, 221, 226, 341, 379
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
HpaII CCGG 1 cut(s) 177
HphI GGTGA 1 cut(s) 127
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 2 cut(s) 121, 265
Hpy8I GTNNAC 1 cut(s) 142
Hpy99I CGWCG 1 cut(s) 64
HpyAV CCTTC 3 cut(s) 116, 223, 337
HpyCH4III ACNGT 3 cut(s) 139, 259, 280
HpyCH4IV ACGT 2 cut(s) 93, 144
HpyCH4V TGCA 5 cut(s) 79, 85, 150, 202, 226
HpyF10VI GCNNNNNNNGC 2 cut(s) 156, 302
HpyF3I CTNAG 1 cut(s) 306
HpySE526I ACGT 2 cut(s) 93, 144
Hsp92I GRCGYC 2 cut(s) 59, 93
Hsp92II CATG 5 cut(s) 202, 221, 226, 341, 379
LmnI GCTCC 1 cut(s) 302
LpnPI CCDG 3 cut(s) 145, 190, 368
Lsp1109I GCAGC 2 cut(s) 65, 337
MaeI CTAG 1 cut(s) 311
MaeII ACGT 2 cut(s) 93, 144
MaeIII GTNAC 1 cut(s) 280
MbiI CCGCTC 1 cut(s) 107
MboII GAAGA 1 cut(s) 231
MfeI CAATTG 1 cut(s) 80
MhlI GDGCHC 1 cut(s) 375
MluCI AATT 1 cut(s) 80
MmeI TCCRAC 1 cut(s) 243
MnlI CCTC 2 cut(s) 206, 395
MseI TTAA 1 cut(s) 270
MspA1I CMGCKG 2 cut(s) 56, 159
MspI CCGG 1 cut(s) 177
MunI CAATTG 1 cut(s) 80
MwoI GCNNNNNNNGC 2 cut(s) 156, 302
NcoI CCATGG 1 cut(s) 337
NlaIII CATG 5 cut(s) 202, 221, 226, 341, 379
NmeAIII GCCGAG 1 cut(s) 190
NmuCI GTSAC 1 cut(s) 280
NspI RCATGY 1 cut(s) 379
PceI AGGCCT 1 cut(s) 384
PciI ACATGT 1 cut(s) 375
PflMI CCANNNNNTGG 1 cut(s) 39
PkrI GCNGC 4 cut(s) 55, 58, 106, 352
PscI ACATGT 1 cut(s) 375
PspFI CCCAGC 1 cut(s) 159
PspPI GGNCC 3 cut(s) 162, 179, 317
SaqAI TTAA 1 cut(s) 270
SatI GCNGC 4 cut(s) 54, 57, 105, 351
Sau96I GGNCC 3 cut(s) 162, 179, 317
SduI GDGCHC 1 cut(s) 375
SetI ASST 8 cut(s) 71, 96, 147, 171, 291, 307, 312, 348
SinI GGWCC 1 cut(s) 317
Sse9I AATT 1 cut(s) 80
SseBI AGGCCT 1 cut(s) 384
SsiI CCGC 3 cut(s) 56, 105, 157
SspI AATATT 1 cut(s) 9
SspMI CTAG 1 cut(s) 311
StuI AGGCCT 1 cut(s) 384
StyI CCWWGG 1 cut(s) 337
TaaI ACNGT 3 cut(s) 139, 259, 280
TaiI ACGT 2 cut(s) 96, 147
TasI AATT 1 cut(s) 80
TauI GCSGC 2 cut(s) 59, 107
Tru1I TTAA 1 cut(s) 270
Tru9I TTAA 1 cut(s) 270
TscAI CASTG 1 cut(s) 285
TseFI GTSAC 1 cut(s) 280
TseI GCWGC 2 cut(s) 53, 350
Tsp45I GTSAC 1 cut(s) 280
TspGWI ACGGA 1 cut(s) 51
TspRI CASTG 1 cut(s) 285
Van91I CCANNNNNTGG 1 cut(s) 39
VpaK11BI GGWCC 1 cut(s) 317
XceI RCATGY 1 cut(s) 379
XspI CTAG 1 cut(s) 311
ZraI GACGTC 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.