f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G12350 AT3G12350 |
| fragaria_vesca | FvH4_2g32960 FvH4_2g32960 FvH4_2g32960 |
| malus_domestica | MD08G1081200.v1.1 |
| prunus_persica | Prupe.1G422100_v2.0.a1 |
| pyrus_communis | pycom08g06690 pycom15g06450 pycom17g21410 |
| rosa_chinensis | RchiOBHm_Chr6g0309741 |
| rosa_laevigata | RLG00000010539 RLG00000015996 |
| rosa_multiflora | Rmu_co8344261.1_g000001 Rmu_co8411317.1_g000001 Rmu_sc0006537.1_g000003 Rmu_sc0007632.1_g000012 Rmu_sc0036085.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00104400 Rroxscaffold_3G00269530 Rroxscaffold_7G00159220 Rroxscaffold_7G00188380 |
| rosa_rugosa | Rorug01G0481900 Rorug02G0141800 Rorug02G0363800 Rorug05G0023200 Rorug06G0374200 |
| rosa_samantha | Rh1AG216500 Rh1BG094300 Rh1BG406600 Rh1CG200700 Rh1DG437100 Rh2BG075700 Rh2CG077700 Rh4CG306100 Rh5AG165300 Rh5AG280900 Rh6AG487700 Rh6BG497300 Rh6CG431800 Rh6CG502000 Rh6DG488300 Rh7DG062900 |
| rosa_wichuraiana | Rw6G042470 Rw7G005180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 60, 218 |
| AcsI | RAATTY | 1 cut(s) | 78 |
| AgsI | TTSAA | 1 cut(s) | 338 |
| AluBI | AGCT | 1 cut(s) | 325 |
| AluI | AGCT | 1 cut(s) | 325 |
| Alw26I | GTCTC | 2 cut(s) | 246, 349 |
| Ama87I | CYCGRG | 1 cut(s) | 186 |
| AoxI | GGCC | 2 cut(s) | 36, 223 |
| ApoI | RAATTY | 1 cut(s) | 78 |
| AspS9I | GGNCC | 2 cut(s) | 15, 224 |
| AsuHPI | GGTGA | 1 cut(s) | 311 |
| AvaI | CYCGRG | 1 cut(s) | 186 |
| AvaII | GGWCC | 1 cut(s) | 15 |
| BceAI | ACGGC | 1 cut(s) | 287 |
| BcoDI | GTCTC | 2 cut(s) | 246, 349 |
| BfaI | CTAG | 1 cut(s) | 165 |
| BfmI | CTRYAG | 1 cut(s) | 219 |
| BglII | AGATCT | 1 cut(s) | 48 |
| Bme18I | GGWCC | 1 cut(s) | 15 |
| BmeT110I | CYCGRG | 1 cut(s) | 186 |
| BmgT120I | GGNCC | 2 cut(s) | 15, 224 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 38, 70 |
| BsaI | GGTCTC | 1 cut(s) | 349 |
| BsaJI | CCNNGG | 1 cut(s) | 42 |
| BseDI | CCNNGG | 1 cut(s) | 42 |
| BseRI | GAGGAG | 1 cut(s) | 43 |
| BshFI | GGCC | 2 cut(s) | 38, 225 |
| BsiHKCI | CYCGRG | 1 cut(s) | 186 |
| BslFI | GGGAC | 1 cut(s) | 236 |
| BsmAI | GTCTC | 2 cut(s) | 246, 349 |
| BsmFI | GGGAC | 1 cut(s) | 236 |
| BsnI | GGCC | 2 cut(s) | 38, 225 |
| Bso31I | GGTCTC | 1 cut(s) | 349 |
| BsoBI | CYCGRG | 1 cut(s) | 186 |
| Bsp143I | GATC | 1 cut(s) | 48 |
| BspANI | GGCC | 2 cut(s) | 38, 225 |
| BspTNI | GGTCTC | 1 cut(s) | 349 |
| BssECI | CCNNGG | 1 cut(s) | 42 |
| BssMI | GATC | 1 cut(s) | 48 |
| BssT1I | CCWWGG | 1 cut(s) | 42 |
| BstC8I | GCNNGC | 1 cut(s) | 154 |
| BstKTI | GATC | 1 cut(s) | 51 |
| BstMAI | GTCTC | 2 cut(s) | 246, 349 |
| BstMBI | GATC | 1 cut(s) | 48 |
| BstSFI | CTRYAG | 1 cut(s) | 219 |
| BstX2I | RGATCY | 1 cut(s) | 48 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 213 |
| BstYI | RGATCY | 1 cut(s) | 48 |
| BsuRI | GGCC | 2 cut(s) | 38, 225 |
| Cac8I | GCNNGC | 1 cut(s) | 154 |
| Cfr13I | GGNCC | 2 cut(s) | 15, 224 |
| CviJI | RGCY | 5 cut(s) | 30, 38, 152, 225, 325 |
| CviKI_1 | RGCY | 5 cut(s) | 30, 38, 152, 225, 325 |
| DpnI | GATC | 1 cut(s) | 50 |
| DpnII | GATC | 1 cut(s) | 48 |
| Eco130I | CCWWGG | 1 cut(s) | 42 |
| Eco31I | GGTCTC | 1 cut(s) | 349 |
| Eco47I | GGWCC | 1 cut(s) | 15 |
| Eco88I | CYCGRG | 1 cut(s) | 186 |
| EcoO109I | RGGNCCY | 2 cut(s) | 15, 224 |
| EcoT14I | CCWWGG | 1 cut(s) | 42 |
| ErhI | CCWWGG | 1 cut(s) | 42 |
| FaiI | YATR | 7 cut(s) | 92, 118, 120, 271, 273, 284, 288 |
| FaqI | GGGAC | 1 cut(s) | 236 |
| FauNDI | CATATG | 1 cut(s) | 118 |
| FblI | GTMKAC | 2 cut(s) | 60, 218 |
| FspBI | CTAG | 1 cut(s) | 165 |
| HaeIII | GGCC | 2 cut(s) | 38, 225 |
| HincII | GTYRAC | 1 cut(s) | 61 |
| HindII | GTYRAC | 1 cut(s) | 61 |
| HinfI | GANTC | 2 cut(s) | 239, 352 |
| HphI | GGTGA | 1 cut(s) | 311 |
| Hpy166II | GTNNAC | 2 cut(s) | 61, 219 |
| Hpy188I | TCNGA | 1 cut(s) | 238 |
| Hpy8I | GTNNAC | 2 cut(s) | 61, 219 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 65 |
| HpyAV | CCTTC | 1 cut(s) | 28 |
| HpyCH4V | TGCA | 2 cut(s) | 116, 177 |
| Kzo9I | GATC | 1 cut(s) | 48 |
| LpnPI | CCDG | 3 cut(s) | 44, 207, 335 |
| MaeI | CTAG | 1 cut(s) | 165 |
| MaeIII | GTNAC | 1 cut(s) | 167 |
| MalI | GATC | 1 cut(s) | 50 |
| MboI | GATC | 1 cut(s) | 48 |
| MboII | GAAGA | 1 cut(s) | 272 |
| MflI | RGATCY | 1 cut(s) | 48 |
| MluCI | AATT | 2 cut(s) | 78, 333 |
| MlyI | GAGTC | 1 cut(s) | 248 |
| MnlI | CCTC | 2 cut(s) | 6, 64 |
| NdeI | CATATG | 1 cut(s) | 118 |
| NdeII | GATC | 1 cut(s) | 48 |
| NmuCI | GTSAC | 1 cut(s) | 167 |
| PfeI | GAWTC | 1 cut(s) | 352 |
| PleI | GAGTC | 1 cut(s) | 247 |
| PpsI | GAGTC | 1 cut(s) | 247 |
| PpuMI | RGGWCCY | 1 cut(s) | 15 |
| Psp5II | RGGWCCY | 1 cut(s) | 15 |
| PspPI | GGNCC | 2 cut(s) | 15, 224 |
| PspPPI | RGGWCCY | 1 cut(s) | 15 |
| PsuI | RGATCY | 1 cut(s) | 48 |
| SalI | GTCGAC | 1 cut(s) | 59 |
| Sau3AI | GATC | 1 cut(s) | 48 |
| Sau96I | GGNCC | 2 cut(s) | 15, 224 |
| SchI | GAGTC | 1 cut(s) | 248 |
| SetI | ASST | 3 cut(s) | 17, 111, 327 |
| SfcI | CTRYAG | 1 cut(s) | 219 |
| SgrDI | CGTCGACG | 1 cut(s) | 59 |
| SinI | GGWCC | 1 cut(s) | 15 |
| Sse9I | AATT | 2 cut(s) | 78, 333 |
| SspMI | CTAG | 1 cut(s) | 165 |
| StyI | CCWWGG | 1 cut(s) | 42 |
| TaqI | TCGA | 2 cut(s) | 60, 292 |
| TasI | AATT | 2 cut(s) | 78, 333 |
| TfiI | GAWTC | 1 cut(s) | 352 |
| TseFI | GTSAC | 1 cut(s) | 167 |
| Tsp45I | GTSAC | 1 cut(s) | 167 |
| TspDTI | ATGAA | 2 cut(s) | 17, 107 |
| TspGWI | ACGGA | 1 cut(s) | 46 |
| VpaK11BI | GGWCC | 1 cut(s) | 15 |
| XapI | RAATTY | 1 cut(s) | 78 |
| XmiI | GTMKAC | 2 cut(s) | 60, 218 |
| XspI | CTAG | 1 cut(s) | 165 |