Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0002007

Physical Location & Seq

Genomic Coordinates Reverse (-)

69828972 .. 69833002

Gene Structure 4031 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG497300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGAGTTACCATAAGTCGCATGCTTGCTCAATTACACTTCTACCCCAACTGAATATCTACATTTACAGGTATCCAGCTCCTACGCTCAGCGCATCGAAGAATCATTCGTTCTTCTCCACGAATCTACCAACCTCAATCCAACACTTCAACTGTTCCTTACACAACTCTTCCGCCTCTCAAATCTCCCACCAGTTTTTAGTTCCCCAAATTCGCCCTGAAAATCAACCCAAATTTGCAATCATGGAAGACCCAAAACTCAACATTGAGGAATTGTACGGCTCAATGTCCTTCTCCGATTTCCCCGAGGACGTCCAGCTCTGCATCCTCTCCTTCCTGACCCCACCGGAGATCTCCAGCTTCGCCTGCACCTCGAAACGGTTCGTTTCGCTCTGCAAGAACGACGCCAAGCTCTGGTTCTCTTTGTGCGACCGCCGCTGGGGCGCCAAGACCCAGATCAATAAATGGGGTAGCGGCAAAATCACGTACCGGAACCTCTACCAGACCCTGAGCCGGTGGGAGAATCTGATCGGATTCTGGCGCCAAGGCGGTCAGGCCACTTCTCCGCCGTTGATTTTCTTCGAGTGGGGCCCTTCGTTCCTGACCGGGTCACGTGTCTCTCCCGCCAAGGACGGCAGCTACGGCGTGGTCAAGGCGCCGTTCTTGTGGATGAGCCTCTCGCCGGAGGGCCAGGTTGTTAACTTTCTCGACCCGGAAGGGCGGGCGGAGATTTCGGCGGCGGAGTTAAACTCCGGCCGGCCGAATTTCTCCGATAAGGATTTGGTGCCGGTGAATTTGAGCTTGATGGGGAAGACTCATTTTGTGGTGGAGGAAGATATGAGCTTTGCCGCTAACAGAAATGGAGGTCGGCCAAGTTCGAGTGCAGTGAGTATTATTGAAGGTGGGATTGGTGAGGATTTGATTGGATACGAGAGTGGGTCCCCCGGGACGTCGCCGAACTCGCCGGACCGGATGATGTCGGAGATTTATCAGTACTTTGCGAACCGGACGAGCCCCGGTTCCGGTGGAGATAGAGCGTCGAGGAGGCAGAGGAGGAGAGAGAAGGAGAAGCAGTTGAGGAGGAAGTTGGAGTCTCAGCATTTTGTTAAGATTGTTGATTGCTCGCCGACGCCGGCTCGGCCTTTGCAGGGCCTCTGGAAGGGAATTTATGATGATATGAACTTGGGATTTTACCTTGTTGCATATGATGACATTGGGGGCATTTCCTGCCAAAAGGTTTGTGACTTGTCTGGTCACATTTGCAGTTTCACTCGGGTTATCAGTAAGCTCCCAGTCTTTTGGACAACAGACCCTACTTTTTCCGAGTCTCCATTTCTCCCAGAGGAAGAAAGTTTATATAATAGTCGCATACATCTTCGACCAAATGCCGTAGCAGATCACATTCTCCAGCTCACAGGAATTGAAGTGGTCTCTCGCATTCTTTGCATTACCTTAAGTTATGATATGGCCATTCCATACATGGTAAGAACTACCACAAACCCAGTGCATGCACAGGGAAGGGTTTGGCAGTACGGGGATGGAACATTTGGATTTGGGTTTCTTCAAGACAGTTTTATCAGGGACTTGAAGCAAGTTGCCAAGAATGATTGTCTTCTTGATATTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like

Protein Analysis

541

Amino Acids

60.77

Weight (kDa)

7.55

Isoelectric Point (pI)

66.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	97 - 135	5.6e-07	F-box domain
F-box-like	PF12937	98 - 143	1.1e-07	F-box-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12350 AT3G12350
fragaria_vesca	FvH4_2g32960 FvH4_2g32960 FvH4_2g32960
malus_domestica	MD08G1081200.v1.1
prunus_persica	Prupe.1G422100_v2.0.a1
pyrus_communis	pycom08g06690 pycom15g06450 pycom17g21410
rosa_chinensis	RchiOBHm_Chr6g0309741
rosa_laevigata	RLG00000010539 RLG00000015996
rosa_multiflora	Rmu_co8344261.1_g000001 Rmu_co8411317.1_g000001 Rmu_sc0006537.1_g000003 Rmu_sc0007632.1_g000012 Rmu_sc0036085.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104400 Rroxscaffold_3G00269530 Rroxscaffold_7G00159220 Rroxscaffold_7G00188380
rosa_rugosa	Rorug01G0481900 Rorug02G0141800 Rorug02G0363800 Rorug05G0023200 Rorug06G0374200
rosa_samantha	Rh1AG216500 Rh1BG094300 Rh1BG406600 Rh1CG200700 Rh1DG437100 Rh2BG075700 Rh2CG077700 Rh4CG306100 Rh5AG165300 Rh5AG280900 Rh6AG487700 Rh6BG497300 Rh6CG431800 Rh6CG502000 Rh6DG488300 Rh7DG062900
rosa_wichuraiana	Rw6G042470 Rw7G005180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	312, 950
AccB1I	GGYRCC	4 cut(s)	440, 537, 652, 781
AccB7I	CCANNNNNTGG	1 cut(s)	411
AcoI	YGGCCR	4 cut(s)	751, 755, 866, 1464
AcsI	RAATTY	5 cut(s)	207, 230, 760, 790, 1161
AcvI	CACGTG	1 cut(s)	611
AcyI	GRCGYC	7 cut(s)	309, 402, 441, 538, 653, 947, 1127
AfaI	GTAC	4 cut(s)	275, 485, 992, 1529
AfiI	CCNNNNNNNGG	8 cut(s)	375, 411, 436, 510, 679, 1019, 1145, 1156
AflII	CTTAAG	1 cut(s)	1450
AflIII	ACRYGT	1 cut(s)	610
AgsI	TTSAA	5 cut(s)	148, 896, 1421, 1562, 1585
AjnI	CCWGG	1 cut(s)	687
AjuI	GAANNNNNNNTTGG	4 cut(s)	398, 430, 888, 920
AluBI	AGCT	9 cut(s)	77, 316, 357, 409, 636, 798, 840, 1285, 1408
AluI	AGCT	9 cut(s)	77, 316, 357, 409, 636, 798, 840, 1285, 1408
Alw26I	GTCTC	4 cut(s)	619, 1095, 1329, 1432
AlwNI	CAGNNNCTG	1 cut(s)	505
Ama87I	CYCGRG	3 cut(s)	302, 941, 1269
AoxI	GGCC	9 cut(s)	552, 586, 685, 751, 755, 866, 1136, 1147, 1464
ApaI	GGGCCC	1 cut(s)	590
ApeKI	GCWGC	1 cut(s)	633
ApoI	RAATTY	5 cut(s)	207, 230, 760, 790, 1161
Asp700I	GAANNNNTTC	1 cut(s)	377
AspLEI	GCGC	4 cut(s)	92, 443, 540, 655
AspS9I	GGNCC	6 cut(s)	586, 587, 685, 936, 964, 1147
AsuC2I	CCSGG	5 cut(s)	604, 710, 942, 943, 1014
AsuHPI	GGTGA	2 cut(s)	799, 920
AvaI	CYCGRG	3 cut(s)	302, 941, 1269
AvaII	GGWCC	2 cut(s)	936, 964
BaeGI	GKGCMC	1 cut(s)	590
BaeI	ACNNNNGTAYC	2 cut(s)	916, 949
BalI	TGGCCA	1 cut(s)	1466
BanI	GGYRCC	4 cut(s)	440, 537, 652, 781
BanII	GRGCYC	2 cut(s)	590, 1013
BbrPI	CACGTG	1 cut(s)	611
BbsI	GAAGAC	3 cut(s)	252, 815, 1601
BbvI	GCAGC	1 cut(s)	645
BccI	CCATC	2 cut(s)	796, 1529
BceAI	ACGGC	6 cut(s)	292, 550, 640, 646, 655, 1370
BciT130I	CCWGG	1 cut(s)	689
BciVI	GTATCC	2 cut(s)	81, 917
BcnI	CCSGG	5 cut(s)	604, 710, 942, 943, 1014
BcoDI	GTCTC	4 cut(s)	619, 1095, 1329, 1432
BfoI	RGCGCY	3 cut(s)	444, 541, 656
BfrI	CTTAAG	1 cut(s)	1450
BfuI	GTATCC	2 cut(s)	81, 917
BglI	GCCNNNNNGGC	2 cut(s)	438, 1135
BglII	AGATCT	1 cut(s)	348
BisI	GCNGC	5 cut(s)	433, 472, 634, 735, 846
BlpI	GCTNAGC	1 cut(s)	86
BlsI	GCNGC	5 cut(s)	434, 473, 635, 736, 847
BmcAI	AGTACT	1 cut(s)	992
Bme1390I	CCNGG	6 cut(s)	604, 689, 710, 942, 943, 1014
Bme18I	GGWCC	2 cut(s)	936, 964
BmeT110I	CYCGRG	3 cut(s)	302, 941, 1269
BmgT120I	GGNCC	6 cut(s)	586, 587, 685, 936, 964, 1147
BmrFI	CCNGG	6 cut(s)	604, 689, 710, 942, 943, 1014
BmrI	ACTGGG	2 cut(s)	1283, 1493
BmsI	GCATC	2 cut(s)	101, 330
BmuI	ACTGGG	2 cut(s)	1283, 1493
BpiI	GAAGAC	3 cut(s)	252, 815, 1601
BplI	GAGNNNNNCTC	2 cut(s)	731, 763
BpmI	CTGGAG	2 cut(s)	337, 1388
Bpu10I	CCTNAGC	1 cut(s)	506
Bpu1102I	GCTNAGC	1 cut(s)	86
BpuMI	CCSGG	5 cut(s)	604, 710, 942, 943, 1014
BsaAI	YACGTR	2 cut(s)	483, 611
BsaHI	GRCGYC	7 cut(s)	309, 402, 441, 538, 653, 947, 1127
BsaI	GGTCTC	1 cut(s)	1432
BsaJI	CCNNGG	6 cut(s)	303, 541, 624, 940, 941, 1012
BsaWI	WCCGGW	5 cut(s)	343, 486, 966, 1002, 1019
BsaXI	ACNNNNNCTCC	2 cut(s)	1055, 1085
Bsc4I	CCNNNNNNNGG	8 cut(s)	375, 411, 436, 510, 679, 1019, 1145, 1156
Bse118I	RCCGGY	4 cut(s)	510, 753, 784, 1129
Bse1I	ACTGG	3 cut(s)	190, 1289, 1499
BseBI	CCWGG	1 cut(s)	689
BseDI	CCNNGG	6 cut(s)	303, 541, 624, 940, 941, 1012
BseGI	GGATG	4 cut(s)	321, 672, 975, 1540
BseLI	CCNNNNNNNGG	8 cut(s)	375, 411, 436, 510, 679, 1019, 1145, 1156
BseMII	CTCAG	3 cut(s)	100, 497, 1106
BseNI	ACTGG	3 cut(s)	190, 1289, 1499
BseRI	GAGGAG	4 cut(s)	1054, 1063, 1066, 1090
BseSI	GKGCMC	1 cut(s)	590
BseX3I	CGGCCG	2 cut(s)	751, 755
BseXI	GCAGC	1 cut(s)	645
BseYI	CCCAGC	1 cut(s)	435
BsgI	GTGCAG	2 cut(s)	349, 900
Bsh1285I	CGRYCG	3 cut(s)	430, 754, 758
BshFI	GGCC	9 cut(s)	554, 588, 687, 753, 757, 868, 1138, 1149, 1466
BshNI	GGYRCC	4 cut(s)	440, 537, 652, 781
BsiEI	CGRYCG	3 cut(s)	430, 754, 758
BsiHKCI	CYCGRG	3 cut(s)	302, 941, 1269
BslFI	GGGAC	3 cut(s)	922, 958, 1592
BslI	CCNNNNNNNGG	8 cut(s)	375, 411, 436, 510, 679, 1019, 1145, 1156
BsmAI	GTCTC	4 cut(s)	619, 1095, 1329, 1432
BsmFI	GGGAC	3 cut(s)	922, 958, 1592
BsmI	GAATGC	1 cut(s)	1434
BsnI	GGCC	9 cut(s)	554, 588, 687, 753, 757, 868, 1138, 1149, 1466
Bso31I	GGTCTC	1 cut(s)	1432
BsoBI	CYCGRG	3 cut(s)	302, 941, 1269
Bsp120I	GGGCCC	1 cut(s)	586
Bsp1286I	GDGCHC	2 cut(s)	590, 1013
Bsp143I	GATC	4 cut(s)	348, 453, 525, 1393
Bsp1720I	GCTNAGC	1 cut(s)	86
BspANI	GGCC	9 cut(s)	554, 588, 687, 753, 757, 868, 1138, 1149, 1466
BspCNI	CTCAG	3 cut(s)	99, 498, 1105
BspT107I	GGYRCC	4 cut(s)	440, 537, 652, 781
BspTI	CTTAAG	1 cut(s)	1450
BspTNI	GGTCTC	1 cut(s)	1432
BsrFI	RCCGGY	4 cut(s)	510, 753, 784, 1129
BsrI	ACTGG	3 cut(s)	190, 1289, 1499
BssAI	RCCGGY	4 cut(s)	510, 753, 784, 1129
BssECI	CCNNGG	6 cut(s)	303, 541, 624, 940, 941, 1012
BssMI	GATC	4 cut(s)	348, 453, 525, 1393
BssNI	GRCGYC	7 cut(s)	309, 402, 441, 538, 653, 947, 1127
BssT1I	CCWWGG	2 cut(s)	541, 624
Bst2UI	CCWGG	1 cut(s)	689
Bst4CI	ACNGT	3 cut(s)	152, 378, 1568
Bst6I	CTCTTC	1 cut(s)	172
BstACI	GRCGYC	7 cut(s)	309, 402, 441, 538, 653, 947, 1127
BstAFI	CTTAAG	1 cut(s)	1450
BstAPI	GCANNNNNTGC	2 cut(s)	1224, 1440
BstBAI	YACGTR	2 cut(s)	483, 611
BstC8I	GCNNGC	8 cut(s)	21, 25, 364, 720, 755, 1121, 1131, 1506
BstDEI	CTNAG	3 cut(s)	86, 506, 1092
BstENI	CCTNNNNNAGG	1 cut(s)	1154
BstF5I	GGATG	4 cut(s)	321, 672, 975, 1540
BstH2I	RGCGCY	3 cut(s)	444, 541, 656
BstHHI	GCGC	4 cut(s)	92, 443, 540, 655
BstKTI	GATC	4 cut(s)	351, 456, 528, 1396
BstMAI	GTCTC	4 cut(s)	619, 1095, 1329, 1432
BstMBI	GATC	4 cut(s)	348, 453, 525, 1393
BstMCI	CGRYCG	3 cut(s)	430, 754, 758
BstMWI	GCNNNNNNNGC	8 cut(s)	363, 432, 438, 639, 958, 1135, 1224, 1440
BstNI	CCWGG	1 cut(s)	689
BstNSI	RCATGY	2 cut(s)	23, 1508
BstSCI	CCNGG	6 cut(s)	602, 687, 708, 940, 941, 1012
BstSLI	GKGCMC	1 cut(s)	590
BstV1I	GCAGC	1 cut(s)	645
BstV2I	GAAGAC	3 cut(s)	252, 815, 1601
BstX2I	RGATCY	1 cut(s)	348
BstXI	CCANNNNNNTGG	1 cut(s)	1296
BstYI	RGATCY	1 cut(s)	348
BstZI	CGGCCG	2 cut(s)	751, 755
BsuI	GTATCC	2 cut(s)	81, 917
BsuRI	GGCC	9 cut(s)	554, 588, 687, 753, 757, 868, 1138, 1149, 1466
BtsCI	GGATG	4 cut(s)	321, 672, 975, 1540
BtsI	GCAGTG	1 cut(s)	888
BtsIMutI	CAGTG	2 cut(s)	888, 1506
Cac8I	GCNNGC	8 cut(s)	21, 25, 364, 720, 755, 1121, 1131, 1506
CaiI	CAGNNNCTG	1 cut(s)	505
CfoI	GCGC	4 cut(s)	92, 443, 540, 655
Cfr10I	RCCGGY	4 cut(s)	510, 753, 784, 1129
Cfr13I	GGNCC	6 cut(s)	586, 587, 685, 936, 964, 1147
Cfr9I	CCCGGG	1 cut(s)	941
CpoI	CGGWCCG	1 cut(s)	964
CseI	GACGC	3 cut(s)	410, 1023, 1135
Csp6I	GTAC	4 cut(s)	274, 484, 991, 1528
CspI	CGGWCCG	1 cut(s)	964
CviAII	CATG	4 cut(s)	20, 241, 1477, 1505
CviQI	GTAC	4 cut(s)	274, 484, 991, 1528
DdeI	CTNAG	3 cut(s)	86, 506, 1092
DinI	GGCGCC	3 cut(s)	442, 539, 654
DpnI	GATC	4 cut(s)	350, 455, 527, 1395
DpnII	GATC	4 cut(s)	348, 453, 525, 1393
EaeI	YGGCCR	4 cut(s)	751, 755, 866, 1464
EagI	CGGCCG	2 cut(s)	751, 755
Eam1104I	CTCTTC	1 cut(s)	172
EarI	CTCTTC	1 cut(s)	172
EciI	GGCGGA	4 cut(s)	160, 552, 737, 752
EclXI	CGGCCG	2 cut(s)	751, 755
Eco130I	CCWWGG	2 cut(s)	541, 624
Eco24I	GRGCYC	2 cut(s)	590, 1013
Eco31I	GGTCTC	1 cut(s)	1432
Eco47I	GGWCC	2 cut(s)	936, 964
Eco52I	CGGCCG	2 cut(s)	751, 755
Eco72I	CACGTG	1 cut(s)	611
Eco88I	CYCGRG	3 cut(s)	302, 941, 1269
EcoNI	CCTNNNNNAGG	1 cut(s)	1154
EcoO109I	RGGNCCY	4 cut(s)	586, 587, 936, 1147
EcoRII	CCWGG	1 cut(s)	687
EcoT14I	CCWWGG	2 cut(s)	541, 624
EcoT38I	GRGCYC	2 cut(s)	590, 1013
EgeI	GGCGCC	3 cut(s)	442, 539, 654
EheI	GGCGCC	3 cut(s)	442, 539, 654
ErhI	CCWWGG	2 cut(s)	541, 624
FaeI	CATG	4 cut(s)	23, 244, 1480, 1508
FaqI	GGGAC	3 cut(s)	922, 958, 1592
FatI	CATG	4 cut(s)	19, 240, 1476, 1504
FauI	CCCGC	2 cut(s)	628, 711
FauNDI	CATATG	1 cut(s)	1201
Fnu4HI	GCNGC	5 cut(s)	433, 472, 634, 735, 846
FokI	GGATG	4 cut(s)	308, 679, 982, 1547
FriOI	GRGCYC	2 cut(s)	590, 1013
FseI	GGCCGGCC	1 cut(s)	757
Fsp4HI	GCNGC	5 cut(s)	433, 472, 634, 735, 846
GlaI	GCGC	4 cut(s)	91, 442, 539, 654
GluI	GCNGC	5 cut(s)	433, 472, 634, 735, 846
GsaI	CCCAGC	1 cut(s)	439
GsuI	CTGGAG	2 cut(s)	337, 1388
HaeII	RGCGCY	3 cut(s)	444, 541, 656
HaeIII	GGCC	9 cut(s)	554, 588, 687, 753, 757, 868, 1138, 1149, 1466
HgaI	GACGC	3 cut(s)	410, 1023, 1135
HhaI	GCGC	4 cut(s)	92, 443, 540, 655
Hin1I	GRCGYC	7 cut(s)	309, 402, 441, 538, 653, 947, 1127
Hin1II	CATG	4 cut(s)	23, 244, 1480, 1508
Hin6I	GCGC	4 cut(s)	90, 441, 538, 653
HinP1I	GCGC	4 cut(s)	90, 441, 538, 653
HincII	GTYRAC	1 cut(s)	697
HindII	GTYRAC	1 cut(s)	697
HinfI	GANTC	7 cut(s)	100, 121, 520, 531, 811, 1088, 1322
HpaI	GTTAAC	1 cut(s)	697
HphI	GGTGA	2 cut(s)	799, 920
Hpy166II	GTNNAC	1 cut(s)	697
Hpy188I	TCNGA	6 cut(s)	295, 525, 530, 769, 979, 1321
Hpy188III	TCNNGA	6 cut(s)	334, 598, 704, 1153, 1562, 1613
Hpy8I	GTNNAC	1 cut(s)	697
Hpy99I	CGWCG	4 cut(s)	404, 952, 1039, 1129
HpyAV	CCTTC	8 cut(s)	298, 340, 600, 707, 890, 1054, 1150, 1509
HpyCH4III	ACNGT	3 cut(s)	152, 378, 1568
HpyCH4IV	ACGT	4 cut(s)	309, 482, 610, 947
HpyF10VI	GCNNNNNNNGC	8 cut(s)	363, 432, 438, 639, 958, 1135, 1224, 1440
HpyF3I	CTNAG	3 cut(s)	86, 506, 1092
HpySE526I	ACGT	4 cut(s)	309, 482, 610, 947
Hsp92I	GRCGYC	7 cut(s)	309, 402, 441, 538, 653, 947, 1127
Hsp92II	CATG	4 cut(s)	23, 244, 1480, 1508
HspAI	GCGC	4 cut(s)	90, 441, 538, 653
KasI	GGCGCC	3 cut(s)	440, 537, 652
KflI	GGGWCCC	1 cut(s)	936
KroI	GCCGGC	2 cut(s)	753, 1129
KroNI	GCCGGC	2 cut(s)	755, 1131
KspAI	GTTAAC	1 cut(s)	697
Kzo9I	GATC	4 cut(s)	348, 453, 525, 1393
LmnI	GCTCC	2 cut(s)	82, 1290
Lsp1109I	GCAGC	1 cut(s)	645
LweI	GCATC	2 cut(s)	101, 330
MaeII	ACGT	4 cut(s)	309, 482, 610, 947
MaeIII	GTNAC	4 cut(s)	5, 606, 1238, 1250
MalI	GATC	4 cut(s)	350, 455, 527, 1395
MboI	GATC	4 cut(s)	348, 453, 525, 1393
MflI	RGATCY	1 cut(s)	348
MhlI	GDGCHC	2 cut(s)	590, 1013
MlsI	TGGCCA	1 cut(s)	1466
MluCI	AATT	8 cut(s)	30, 207, 230, 269, 760, 790, 1161, 1416
MluNI	TGGCCA	1 cut(s)	1466
Mly113I	GGCGCC	3 cut(s)	441, 538, 653
MlyI	GAGTC	3 cut(s)	805, 1097, 1331
MmeI	TCCRAC	3 cut(s)	163, 957, 1065
Mox20I	TGGCCA	1 cut(s)	1466
MroNI	GCCGGC	2 cut(s)	753, 1129
MroXI	GAANNNNTTC	1 cut(s)	377
MscI	TGGCCA	1 cut(s)	1466
MseI	TTAA	4 cut(s)	696, 743, 1104, 1451
Msp20I	TGGCCA	1 cut(s)	1466
MspA1I	CMGCKG	1 cut(s)	435
MspCI	CTTAAG	1 cut(s)	1450
MspR9I	CCNGG	6 cut(s)	604, 689, 710, 942, 943, 1014
Mva1269I	GAATGC	1 cut(s)	1434
MvaI	CCWGG	1 cut(s)	689
MwoI	GCNNNNNNNGC	8 cut(s)	363, 432, 438, 639, 958, 1135, 1224, 1440
NaeI	GCCGGC	2 cut(s)	755, 1131
NarI	GGCGCC	3 cut(s)	441, 538, 653
NciI	CCSGG	5 cut(s)	604, 710, 942, 943, 1014
NdeI	CATATG	1 cut(s)	1201
NdeII	GATC	4 cut(s)	348, 453, 525, 1393
NgoMIV	GCCGGC	2 cut(s)	753, 1129
NlaIII	CATG	4 cut(s)	23, 244, 1480, 1508
NmeAIII	GCCGAG	1 cut(s)	1114
NmuCI	GTSAC	3 cut(s)	606, 1238, 1250
NspI	RCATGY	2 cut(s)	23, 1508
PaeI	GCATGC	2 cut(s)	23, 1508
PctI	GAATGC	1 cut(s)	1434
PdiI	GCCGGC	2 cut(s)	755, 1131
PdmI	GAANNNNTTC	1 cut(s)	377
PfeI	GAWTC	4 cut(s)	100, 121, 520, 531
PflFI	GACNNNGTC	1 cut(s)	604
PflMI	CCANNNNNTGG	1 cut(s)	411
PkrI	GCNGC	5 cut(s)	434, 473, 635, 736, 847
PleI	GAGTC	3 cut(s)	805, 1096, 1330
PluTI	GGCGCC	3 cut(s)	444, 541, 656
PmaCI	CACGTG	1 cut(s)	611
PmlI	CACGTG	1 cut(s)	611
PpsI	GAGTC	3 cut(s)	805, 1096, 1330
Ppu21I	YACGTR	2 cut(s)	483, 611
PpuMI	RGGWCCY	1 cut(s)	936
Psp5II	RGGWCCY	1 cut(s)	936
Psp6I	CCWGG	1 cut(s)	687
PspCI	CACGTG	1 cut(s)	611
PspFI	CCCAGC	1 cut(s)	435
PspGI	CCWGG	1 cut(s)	687
PspOMI	GGGCCC	1 cut(s)	586
PspPI	GGNCC	6 cut(s)	586, 587, 685, 936, 964, 1147
PspPPI	RGGWCCY	1 cut(s)	936
PstNI	CAGNNNCTG	1 cut(s)	505
PsuI	RGATCY	1 cut(s)	348
PsyI	GACNNNGTC	1 cut(s)	604
RigI	GGCCGGCC	1 cut(s)	757
RsaI	GTAC	4 cut(s)	275, 485, 992, 1529
RsaNI	GTAC	4 cut(s)	274, 484, 991, 1528
Rsr2I	CGGWCCG	1 cut(s)	964
RsrII	CGGWCCG	1 cut(s)	964
SaqAI	TTAA	4 cut(s)	696, 743, 1104, 1451
SatI	GCNGC	5 cut(s)	433, 472, 634, 735, 846
Sau3AI	GATC	4 cut(s)	348, 453, 525, 1393
Sau96I	GGNCC	6 cut(s)	586, 587, 685, 936, 964, 1147
ScaI	AGTACT	1 cut(s)	992
SchI	GAGTC	3 cut(s)	805, 1097, 1331
ScrFI	CCNGG	6 cut(s)	604, 689, 710, 942, 943, 1014
SduI	GDGCHC	2 cut(s)	590, 1013
SfaNI	GCATC	2 cut(s)	101, 330
SfoI	GGCGCC	3 cut(s)	442, 539, 654
SinI	GGWCC	2 cut(s)	936, 964
SmaI	CCCGGG	1 cut(s)	943
SmlI	CTYRAG	1 cut(s)	1450
SmoI	CTYRAG	1 cut(s)	1450
SphI	GCATGC	2 cut(s)	23, 1508
Sse9I	AATT	8 cut(s)	30, 207, 230, 269, 760, 790, 1161, 1416
SspDI	GGCGCC	3 cut(s)	440, 537, 652
StyD4I	CCNGG	6 cut(s)	602, 687, 708, 940, 941, 1012
StyI	CCWWGG	2 cut(s)	541, 624
TaaI	ACNGT	3 cut(s)	152, 378, 1568
TaiI	ACGT	4 cut(s)	312, 485, 613, 950
TaqI	TCGA	7 cut(s)	95, 371, 579, 705, 875, 1037, 1375
TasI	AATT	8 cut(s)	30, 207, 230, 269, 760, 790, 1161, 1416
TatI	WGTACW	1 cut(s)	990
TauI	GCSGC	4 cut(s)	435, 474, 737, 848
TfiI	GAWTC	4 cut(s)	100, 121, 520, 531
Tru1I	TTAA	4 cut(s)	696, 743, 1104, 1451
Tru9I	TTAA	4 cut(s)	696, 743, 1104, 1451
TscAI	CASTG	2 cut(s)	888, 1506
TseFI	GTSAC	3 cut(s)	606, 1238, 1250
TseI	GCWGC	1 cut(s)	633
Tsp45I	GTSAC	3 cut(s)	606, 1238, 1250
TspDTI	ATGAA	1 cut(s)	1190
TspMI	CCCGGG	1 cut(s)	941
TspRI	CASTG	2 cut(s)	888, 1506
Tth111I	GACNNNGTC	1 cut(s)	604
Van91I	CCANNNNNTGG	1 cut(s)	411
Vha464I	CTTAAG	1 cut(s)	1450
VpaK11BI	GGWCC	2 cut(s)	936, 964
XagI	CCTNNNNNAGG	1 cut(s)	1154
XapI	RAATTY	5 cut(s)	207, 230, 760, 790, 1161
XceI	RCATGY	2 cut(s)	23, 1508
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1474
XmaI	CCCGGG	1 cut(s)	941
XmnI	GAANNNNTTC	1 cut(s)	377
ZraI	GACGTC	2 cut(s)	310, 948
ZrmI	AGTACT	1 cut(s)	992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.