f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G12350 AT3G12350 |
| fragaria_vesca | FvH4_2g32960 FvH4_2g32960 FvH4_2g32960 |
| malus_domestica | MD08G1081200.v1.1 |
| prunus_persica | Prupe.1G422100_v2.0.a1 |
| pyrus_communis | pycom08g06690 pycom15g06450 pycom17g21410 |
| rosa_chinensis | RchiOBHm_Chr6g0309741 |
| rosa_laevigata | RLG00000010539 RLG00000015996 |
| rosa_multiflora | Rmu_co8344261.1_g000001 Rmu_co8411317.1_g000001 Rmu_sc0006537.1_g000003 Rmu_sc0007632.1_g000012 Rmu_sc0036085.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00104400 Rroxscaffold_3G00269530 Rroxscaffold_7G00159220 Rroxscaffold_7G00188380 |
| rosa_rugosa | Rorug01G0481900 Rorug02G0141800 Rorug02G0363800 Rorug05G0023200 Rorug06G0374200 |
| rosa_samantha | Rh1AG216500 Rh1BG094300 Rh1BG406600 Rh1CG200700 Rh1DG437100 Rh2BG075700 Rh2CG077700 Rh4CG306100 Rh5AG165300 Rh5AG280900 Rh6AG487700 Rh6BG497300 Rh6CG431800 Rh6CG502000 Rh6DG488300 Rh7DG062900 |
| rosa_wichuraiana | Rw6G042470 Rw7G005180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 173 |
| AciI | CCGC | 1 cut(s) | 18 |
| AclWI | GGATC | 1 cut(s) | 29 |
| AcsI | RAATTY | 1 cut(s) | 33 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 339 |
| AgsI | TTSAA | 3 cut(s) | 248, 292, 303 |
| AluBI | AGCT | 1 cut(s) | 280 |
| AluI | AGCT | 1 cut(s) | 280 |
| Alw26I | GTCTC | 1 cut(s) | 201 |
| AlwI | GGATC | 1 cut(s) | 29 |
| Ama87I | CYCGRG | 1 cut(s) | 141 |
| AoxI | GGCC | 1 cut(s) | 178 |
| ApoI | RAATTY | 1 cut(s) | 33 |
| AspS9I | GGNCC | 1 cut(s) | 179 |
| AsuHPI | GGTGA | 1 cut(s) | 266 |
| AvaI | CYCGRG | 1 cut(s) | 141 |
| AxyI | CCTNAGG | 1 cut(s) | 323 |
| BceAI | ACGGC | 2 cut(s) | 31, 242 |
| BcoDI | GTCTC | 1 cut(s) | 201 |
| BfaI | CTAG | 1 cut(s) | 120 |
| BfmI | CTRYAG | 1 cut(s) | 174 |
| BmeT110I | CYCGRG | 1 cut(s) | 141 |
| BmgT120I | GGNCC | 1 cut(s) | 179 |
| BmiI | GGNNCC | 1 cut(s) | 331 |
| BmsI | GCATC | 1 cut(s) | 304 |
| BpuEI | CTTGAG | 1 cut(s) | 73 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 339 |
| Bse21I | CCTNAGG | 1 cut(s) | 323 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 339 |
| BshFI | GGCC | 1 cut(s) | 180 |
| BsiHKCI | CYCGRG | 1 cut(s) | 141 |
| BslFI | GGGAC | 1 cut(s) | 191 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 339 |
| BsmAI | GTCTC | 1 cut(s) | 201 |
| BsmFI | GGGAC | 1 cut(s) | 191 |
| BsnI | GGCC | 1 cut(s) | 180 |
| BsoBI | CYCGRG | 1 cut(s) | 141 |
| Bsp143I | GATC | 2 cut(s) | 21, 265 |
| BspACI | CCGC | 1 cut(s) | 18 |
| BspANI | GGCC | 1 cut(s) | 180 |
| BspLI | GGNNCC | 1 cut(s) | 331 |
| BspPI | GGATC | 1 cut(s) | 29 |
| BssMI | GATC | 2 cut(s) | 21, 265 |
| BstC8I | GCNNGC | 1 cut(s) | 109 |
| BstDEI | CTNAG | 1 cut(s) | 323 |
| BstKTI | GATC | 2 cut(s) | 24, 268 |
| BstMAI | GTCTC | 1 cut(s) | 201 |
| BstMBI | GATC | 2 cut(s) | 21, 265 |
| BstNSI | RCATGY | 1 cut(s) | 94 |
| BstSFI | CTRYAG | 1 cut(s) | 174 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 168 |
| Bsu36I | CCTNAGG | 1 cut(s) | 323 |
| BsuRI | GGCC | 1 cut(s) | 180 |
| Cac8I | GCNNGC | 1 cut(s) | 109 |
| Cfr13I | GGNCC | 1 cut(s) | 179 |
| CviAII | CATG | 1 cut(s) | 91 |
| CviJI | RGCY | 5 cut(s) | 8, 107, 180, 280, 332 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 107, 180, 280, 332 |
| DdeI | CTNAG | 1 cut(s) | 323 |
| DpnI | GATC | 2 cut(s) | 23, 267 |
| DpnII | GATC | 2 cut(s) | 21, 265 |
| Eco81I | CCTNAGG | 1 cut(s) | 323 |
| Eco88I | CYCGRG | 1 cut(s) | 141 |
| EcoO109I | RGGNCCY | 1 cut(s) | 179 |
| FaeI | CATG | 1 cut(s) | 94 |
| FaiI | YATR | 9 cut(s) | 39, 47, 73, 75, 92, 226, 228, 239, 243 |
| FaqI | GGGAC | 1 cut(s) | 191 |
| FatI | CATG | 1 cut(s) | 90 |
| FauI | CCCGC | 1 cut(s) | 11 |
| FauNDI | CATATG | 1 cut(s) | 73 |
| FblI | GTMKAC | 1 cut(s) | 173 |
| FspBI | CTAG | 1 cut(s) | 120 |
| HaeIII | GGCC | 1 cut(s) | 180 |
| Hin1II | CATG | 1 cut(s) | 94 |
| HinfI | GANTC | 1 cut(s) | 335 |
| HphI | GGTGA | 1 cut(s) | 266 |
| Hpy166II | GTNNAC | 1 cut(s) | 174 |
| Hpy8I | GTNNAC | 1 cut(s) | 174 |
| HpyAV | CCTTC | 1 cut(s) | 286 |
| HpyCH4V | TGCA | 2 cut(s) | 71, 132 |
| HpyF3I | CTNAG | 1 cut(s) | 323 |
| Hsp92II | CATG | 1 cut(s) | 94 |
| Kzo9I | GATC | 2 cut(s) | 21, 265 |
| LmnI | GCTCC | 1 cut(s) | 329 |
| LpnPI | CCDG | 2 cut(s) | 162, 290 |
| LweI | GCATC | 1 cut(s) | 304 |
| MaeI | CTAG | 1 cut(s) | 120 |
| MaeIII | GTNAC | 1 cut(s) | 122 |
| MalI | GATC | 2 cut(s) | 23, 267 |
| MboI | GATC | 2 cut(s) | 21, 265 |
| MboII | GAAGA | 3 cut(s) | 227, 296, 356 |
| MluCI | AATT | 3 cut(s) | 33, 287, 298 |
| MnlI | CCTC | 1 cut(s) | 23 |
| MseI | TTAA | 1 cut(s) | 358 |
| NdeI | CATATG | 1 cut(s) | 73 |
| NdeII | GATC | 2 cut(s) | 21, 265 |
| NlaIII | CATG | 1 cut(s) | 94 |
| NlaIV | GGNNCC | 1 cut(s) | 331 |
| NmuCI | GTSAC | 1 cut(s) | 122 |
| NspI | RCATGY | 1 cut(s) | 94 |
| PfeI | GAWTC | 1 cut(s) | 335 |
| PspN4I | GGNNCC | 1 cut(s) | 331 |
| PspPI | GGNCC | 1 cut(s) | 179 |
| SaqAI | TTAA | 1 cut(s) | 358 |
| Sau3AI | GATC | 2 cut(s) | 21, 265 |
| Sau96I | GGNCC | 1 cut(s) | 179 |
| SetI | ASST | 3 cut(s) | 66, 282, 297 |
| SfaNI | GCATC | 1 cut(s) | 304 |
| SfcI | CTRYAG | 1 cut(s) | 174 |
| SmlI | CTYRAG | 1 cut(s) | 52 |
| SmoI | CTYRAG | 1 cut(s) | 52 |
| Sse9I | AATT | 3 cut(s) | 33, 287, 298 |
| SsiI | CCGC | 1 cut(s) | 18 |
| SspMI | CTAG | 1 cut(s) | 120 |
| TaqI | TCGA | 1 cut(s) | 282 |
| TasI | AATT | 3 cut(s) | 33, 287, 298 |
| TfiI | GAWTC | 1 cut(s) | 335 |
| Tru1I | TTAA | 1 cut(s) | 358 |
| Tru9I | TTAA | 1 cut(s) | 358 |
| TseFI | GTSAC | 1 cut(s) | 122 |
| Tsp45I | GTSAC | 1 cut(s) | 122 |
| TspDTI | ATGAA | 1 cut(s) | 62 |
| TspGWI | ACGGA | 1 cut(s) | 189 |
| XapI | RAATTY | 1 cut(s) | 33 |
| XceI | RCATGY | 1 cut(s) | 94 |
| XmiI | GTMKAC | 1 cut(s) | 173 |
| XspI | CTAG | 1 cut(s) | 120 |