f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G12350 AT3G12350 |
| fragaria_vesca | FvH4_2g32960 FvH4_2g32960 FvH4_2g32960 |
| malus_domestica | MD08G1081200.v1.1 |
| prunus_persica | Prupe.1G422100_v2.0.a1 |
| pyrus_communis | pycom08g06690 pycom15g06450 pycom17g21410 |
| rosa_chinensis | RchiOBHm_Chr6g0309741 |
| rosa_laevigata | RLG00000010539 RLG00000015996 |
| rosa_multiflora | Rmu_co8344261.1_g000001 Rmu_co8411317.1_g000001 Rmu_sc0006537.1_g000003 Rmu_sc0007632.1_g000012 Rmu_sc0036085.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00104400 Rroxscaffold_3G00269530 Rroxscaffold_7G00159220 Rroxscaffold_7G00188380 |
| rosa_rugosa | Rorug01G0481900 Rorug02G0141800 Rorug02G0363800 Rorug05G0023200 Rorug06G0374200 |
| rosa_samantha | Rh1AG216500 Rh1BG094300 Rh1BG406600 Rh1CG200700 Rh1DG437100 Rh2BG075700 Rh2CG077700 Rh4CG306100 Rh5AG165300 Rh5AG280900 Rh6AG487700 Rh6BG497300 Rh6CG431800 Rh6CG502000 Rh6DG488300 Rh7DG062900 |
| rosa_wichuraiana | Rw6G042470 Rw7G005180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 128 |
| AgsI | TTSAA | 1 cut(s) | 248 |
| AluBI | AGCT | 1 cut(s) | 235 |
| AluI | AGCT | 1 cut(s) | 235 |
| Alw26I | GTCTC | 2 cut(s) | 156, 259 |
| Ama87I | CYCGRG | 1 cut(s) | 96 |
| AsuHPI | GGTGA | 1 cut(s) | 221 |
| AvaI | CYCGRG | 1 cut(s) | 96 |
| BceAI | ACGGC | 1 cut(s) | 197 |
| BcoDI | GTCTC | 2 cut(s) | 156, 259 |
| BfaI | CTAG | 1 cut(s) | 75 |
| BmeT110I | CYCGRG | 1 cut(s) | 96 |
| BsaI | GGTCTC | 1 cut(s) | 259 |
| BsiHKCI | CYCGRG | 1 cut(s) | 96 |
| BslFI | GGGAC | 1 cut(s) | 146 |
| BsmAI | GTCTC | 2 cut(s) | 156, 259 |
| BsmFI | GGGAC | 1 cut(s) | 146 |
| Bso31I | GGTCTC | 1 cut(s) | 259 |
| BsoBI | CYCGRG | 1 cut(s) | 96 |
| Bsp143I | GATC | 1 cut(s) | 220 |
| BspTNI | GGTCTC | 1 cut(s) | 259 |
| BssMI | GATC | 1 cut(s) | 220 |
| BstC8I | GCNNGC | 1 cut(s) | 64 |
| BstKTI | GATC | 1 cut(s) | 223 |
| BstMAI | GTCTC | 2 cut(s) | 156, 259 |
| BstMBI | GATC | 1 cut(s) | 220 |
| BstNSI | RCATGY | 2 cut(s) | 49, 135 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 123 |
| Cac8I | GCNNGC | 1 cut(s) | 64 |
| CviAII | CATG | 2 cut(s) | 46, 132 |
| CviJI | RGCY | 2 cut(s) | 62, 235 |
| CviKI_1 | RGCY | 2 cut(s) | 62, 235 |
| DpnI | GATC | 1 cut(s) | 222 |
| DpnII | GATC | 1 cut(s) | 220 |
| Eco31I | GGTCTC | 1 cut(s) | 259 |
| Eco88I | CYCGRG | 1 cut(s) | 96 |
| FaeI | CATG | 2 cut(s) | 49, 135 |
| FaiI | YATR | 8 cut(s) | 28, 30, 47, 133, 181, 183, 194, 198 |
| FaqI | GGGAC | 1 cut(s) | 146 |
| FatI | CATG | 2 cut(s) | 45, 131 |
| FauNDI | CATATG | 1 cut(s) | 28 |
| FblI | GTMKAC | 1 cut(s) | 128 |
| FspBI | CTAG | 1 cut(s) | 75 |
| Hin1II | CATG | 2 cut(s) | 49, 135 |
| HinfI | GANTC | 1 cut(s) | 262 |
| HphI | GGTGA | 1 cut(s) | 221 |
| Hpy166II | GTNNAC | 1 cut(s) | 129 |
| Hpy188I | TCNGA | 1 cut(s) | 261 |
| Hpy8I | GTNNAC | 1 cut(s) | 129 |
| HpyCH4V | TGCA | 2 cut(s) | 26, 87 |
| Hsp92II | CATG | 2 cut(s) | 49, 135 |
| Kzo9I | GATC | 1 cut(s) | 220 |
| LpnPI | CCDG | 1 cut(s) | 245 |
| MaeI | CTAG | 1 cut(s) | 75 |
| MaeIII | GTNAC | 1 cut(s) | 77 |
| MalI | GATC | 1 cut(s) | 222 |
| MboI | GATC | 1 cut(s) | 220 |
| MboII | GAAGA | 1 cut(s) | 182 |
| MluCI | AATT | 1 cut(s) | 243 |
| NdeI | CATATG | 1 cut(s) | 28 |
| NdeII | GATC | 1 cut(s) | 220 |
| NlaIII | CATG | 2 cut(s) | 49, 135 |
| NmuCI | GTSAC | 1 cut(s) | 77 |
| NspI | RCATGY | 2 cut(s) | 49, 135 |
| PfeI | GAWTC | 1 cut(s) | 262 |
| Sau3AI | GATC | 1 cut(s) | 220 |
| SetI | ASST | 2 cut(s) | 21, 237 |
| Sse9I | AATT | 1 cut(s) | 243 |
| SspMI | CTAG | 1 cut(s) | 75 |
| TaqI | TCGA | 1 cut(s) | 202 |
| TasI | AATT | 1 cut(s) | 243 |
| TfiI | GAWTC | 1 cut(s) | 262 |
| TseFI | GTSAC | 1 cut(s) | 77 |
| Tsp45I | GTSAC | 1 cut(s) | 77 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XceI | RCATGY | 2 cut(s) | 49, 135 |
| XmiI | GTMKAC | 1 cut(s) | 128 |
| XspI | CTAG | 1 cut(s) | 75 |