Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002007

Physical Location & Seq

Genomic Coordinates Forward (+)

1463838 .. 1466441

Gene Structure 2604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0023200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGCAAAGCCGTCGTCGTCGTCCTCCTCGACGGCGTCGTTTCCGCCTCTCAAGCCCGACGACTACTCCCACAGCCGCGTCCACTACGCCGTCGTTTTGGCAGACCACACCACTCTCTCCCGAATCGTCTCCACGCTCCCCCGCCTCGCCGATCCGACTCAGATCCACACCGAGTCCGACTCGCTCTCCCAGGAGCGTGTCGCTGATAAGATCTCCGCCGTGCTCGACCGCCGCGACGTCCCTCACAGAGAAACCCCTCTCCATCTTGCTGTCCGTTTAAACGACGCCGTTTCGGCCAAAATCCTCGCCTCCGCCGGCGCCGACGTGTCGCTGCAGAACGCCGCCGGGTGGAACCCCTTGCAGGAGGCTCTCTGCCGCCGGAGCTCCGAGATCGCCTTGATCTTGCTCAAGCTCCACCACCGCTCCGCCTGGGCCAAGTGGCGCCGCCGCCTGCCACGTGTCATCGCTGTGCTGCGGAGAATGCGGGACTTCTACATGGAGATCTCGTTCCACTTCGAGAGCTCCGTCATTCCGTTCGTCGGGAAAATCGCTCCGTCCGACACGTACAAGATCTGGAAGCGAGACGGAAACCTACGCGCCGACACTTCGTTGGCCGGGTTCGACGGCCTGAAGATCCAGCGCGCCGATCAGAGCTTCCTCTTCCTCGGCGACGGCGACCAGACTCACGACGTTCCGCCGGGTTCACTGCTCGTCCTCAACCGCGACGACCGGAAAATCTTCGACGCCTTTGAGAACGCCGGGTCGCCGATGACCGAGTCCGACATCGCCGGATTCTGCTCCCAGACGAGCGTCTACCGCCCCGGCATGGACGTCACCAGAGCCGAGCTCGTCGGCCGGACCAATTGGCGACGGCAGGAGAAGACCGAATCCGTCGGAGAGTGGAAGGCCAGAGTCTTCGAAATGCACAACGTCGTCTTCAGCTTCCGGTCCCGGAAAGTCGCCAATCCGGATAATGCTGACGTGGCGGCGGGAAGCGAGCAGGTCCTCCCTCTAGAGCTAGACGAAGACGACGACGGTTTTTTAGTGGCGGAGAATCCGAGCATGTTCGGAATCCCCGACGGCCGGAGGCACAGTAGCTTCATCAGAGAGGACCGGGAGTTCGTGGCATTGGGGAGAAAAAGCGTCGACGTGACGTTTCAGCCGCCGCGGAGGTCCATGGCGGCGACCGTTACGGCGGCGCCGGTCCAGACCAAAGAGAAAGAGTACGTCAAGAGCCTGAGACCCTCCGTTTGGCTGACGGACCATTTTCCGTTGAAGACGGAGGAGCTGCTGCCGTTACTGGATATTCTGGCGAGTAAAGTGAAGGCGGTTAGGAGAATGAGGGAGCTGCTCACTACCAAGTTCCCGCCAGGGACGTTTCCGGTGAAGCTGGCGATACCGGTGGTGCCCACAGTGAGAGTGGTGATAACATTCACCAAGTTCGTTGAGCTACAGCCAACGGAGCAGTTCTTCACTCCAATGTCGAGCCCTAGGCAGTTGATAAGGGGCCAACAGCAAGAGGAGGAGCACAGGAGCAAGACGGCAACGACGACGCAGAAGCCTTCTGGGTCGTCGTGGTTGAGGCGGAACAGCAGCCAGTCCGCATCGGCCACGAGCAAGCAGCAACACCAGCATTCGAGTGCGGTGGGGTGGCAGGAGCCGGAGCCTTTTGCGATTCCTAGCGGTTATACGTGGACTAGTATCGATGACAAGTCTCGGAAGATGAGGAAATCGAAATCGATTAGGAAATCTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like

Protein Analysis

585

Amino Acids

65.79

Weight (kDa)

9.64

Isoelectric Point (pI)

55.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	82 - 137	9.1e-06	Ankyrin repeats (3 copies)
ANKRD13_C	PF11904	199 - 564	2.1e-102	ANKRD13 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12350 AT3G12350
fragaria_vesca	FvH4_2g32960 FvH4_2g32960 FvH4_2g32960
malus_domestica	MD08G1081200.v1.1
prunus_persica	Prupe.1G422100_v2.0.a1
pyrus_communis	pycom08g06690 pycom15g06450 pycom17g21410
rosa_chinensis	RchiOBHm_Chr6g0309741
rosa_laevigata	RLG00000010539 RLG00000015996
rosa_multiflora	Rmu_co8344261.1_g000001 Rmu_co8411317.1_g000001 Rmu_sc0006537.1_g000003 Rmu_sc0007632.1_g000012 Rmu_sc0036085.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104400 Rroxscaffold_3G00269530 Rroxscaffold_7G00159220 Rroxscaffold_7G00188380
rosa_rugosa	Rorug01G0481900 Rorug02G0141800 Rorug02G0363800 Rorug05G0023200 Rorug06G0374200
rosa_samantha	Rh1AG216500 Rh1BG094300 Rh1BG406600 Rh1CG200700 Rh1DG437100 Rh2BG075700 Rh2CG077700 Rh4CG306100 Rh5AG165300 Rh5AG280900 Rh6AG487700 Rh6BG497300 Rh6CG431800 Rh6CG502000 Rh6DG488300 Rh7DG062900
rosa_wichuraiana	Rw6G042470 Rw7G005180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	240, 834
Acc36I	ACCTGC	1 cut(s)	991
AccB1I	GGYRCC	4 cut(s)	317, 441, 1198, 1405
AccBSI	CCGCTC	1 cut(s)	423
AccI	GTMKAC	2 cut(s)	813, 1146
AccII	CGCG	6 cut(s)	78, 234, 597, 642, 723, 1168
AccIII	TCCGGA	1 cut(s)	967
AclWI	GGATC	3 cut(s)	146, 157, 628
AcoI	YGGCCR	5 cut(s)	294, 612, 853, 1081, 1608
AcuI	CTGAAG	2 cut(s)	650, 922
AcvI	CACGTG	1 cut(s)	458
AcyI	GRCGYC	8 cut(s)	35, 237, 285, 318, 442, 744, 831, 1199
AfaI	GTAC	2 cut(s)	566, 1226
AfiI	CCNNNNNNNGG	6 cut(s)	348, 361, 539, 826, 1083, 1251
AflIII	ACRYGT	3 cut(s)	324, 457, 561
AgeI	ACCGGT	1 cut(s)	1399
AgsI	TTSAA	1 cut(s)	1276
AhlI	ACTAGT	1 cut(s)	1697
AjiI	CACGTC	3 cut(s)	325, 982, 1150
AjnI	CCWGG	3 cut(s)	189, 428, 1369
AloI	GAACNNNNNNTCC	4 cut(s)	491, 523, 1103, 1135
Alw21I	GWGCWC	5 cut(s)	225, 386, 524, 849, 1530
Alw26I	GTCTC	4 cut(s)	133, 576, 1234, 1719
AlwI	GGATC	3 cut(s)	146, 157, 628
Aor13HI	TCCGGA	1 cut(s)	967
AoxI	GGCC	9 cut(s)	294, 432, 612, 625, 853, 906, 1081, 1507, 1608
ApeKI	GCWGC	7 cut(s)	331, 472, 1288, 1291, 1348, 1593, 1621
ArsI	GACNNNNNNTTYG	5 cut(s)	31, 1103, 1135, 1233, 1265
AsiGI	ACCGGT	1 cut(s)	1399
Asp700I	GAANNNNTTC	1 cut(s)	737
AspA2I	CCTAGG	1 cut(s)	1490
AspLEI	GCGC	6 cut(s)	320, 444, 599, 642, 644, 1201
AspS9I	GGNCC	9 cut(s)	432, 858, 948, 1003, 1111, 1173, 1204, 1261, 1507
AsuC2I	CCSGG	7 cut(s)	346, 616, 699, 760, 822, 952, 1115
AsuHPI	GGTGA	4 cut(s)	826, 1396, 1426, 1435
AsuII	TTCGAA	1 cut(s)	918
AvaII	GGWCC	7 cut(s)	858, 948, 1003, 1111, 1173, 1204, 1261
AvrII	CCTAGG	1 cut(s)	1490
BaeGI	GKGCMC	1 cut(s)	1410
BanI	GGYRCC	4 cut(s)	317, 441, 1198, 1405
BanII	GRGCYC	4 cut(s)	386, 524, 849, 1490
BauI	CACGAG	1 cut(s)	1612
BbrPI	CACGTG	1 cut(s)	458
BbsI	GAAGAC	5 cut(s)	887, 907, 928, 1032, 1283
Bbv12I	GWGCWC	5 cut(s)	225, 386, 524, 849, 1530
BbvI	GCAGC	7 cut(s)	318, 459, 1275, 1278, 1335, 1605, 1633
BccI	CCATC	1 cut(s)	270
BcgI	CGANNNNNNTGC	1 cut(s)	28
BciT130I	CCWGG	3 cut(s)	191, 430, 1371
BcnI	CCSGG	7 cut(s)	346, 616, 699, 760, 822, 952, 1115
BcoDI	GTCTC	4 cut(s)	133, 576, 1234, 1719
BcuI	ACTAGT	1 cut(s)	1697
BfaI	CTAG	5 cut(s)	1013, 1019, 1491, 1680, 1698
BfmI	CTRYAG	2 cut(s)	332, 1451
BfoI	RGCGCY	3 cut(s)	321, 445, 1202
BfuAI	ACCTGC	1 cut(s)	991
BglI	GCCNNNNNGGC	1 cut(s)	293
BglII	AGATCT	3 cut(s)	210, 501, 570
BlnI	CCTAGG	1 cut(s)	1490
Bme18I	GGWCC	7 cut(s)	858, 948, 1003, 1111, 1173, 1204, 1261
BmgBI	CACGTC	3 cut(s)	325, 982, 1150
BmgT120I	GGNCC	9 cut(s)	432, 858, 948, 1003, 1111, 1173, 1204, 1261, 1507
BmiI	GGNNCC	9 cut(s)	319, 353, 443, 950, 1200, 1407, 1508, 1659, 1665
BmsI	GCATC	1 cut(s)	1613
BoxI	GACNNNNGTC	1 cut(s)	809
BpiI	GAAGAC	5 cut(s)	887, 907, 928, 1032, 1283
BplI	GAGNNNNNCTC	4 cut(s)	164, 196, 831, 863
Bpu14I	TTCGAA	1 cut(s)	918
BpuEI	CTTGAG	2 cut(s)	35, 392
BpuMI	CCSGG	7 cut(s)	346, 616, 699, 760, 822, 952, 1115
Bsa29I	ATCGAT	2 cut(s)	1704, 1739
BsaAI	YACGTR	3 cut(s)	458, 564, 1692
BsaHI	GRCGYC	8 cut(s)	35, 237, 285, 318, 442, 744, 831, 1199
BsaI	GGTCTC	1 cut(s)	1234
BsaJI	CCNNGG	8 cut(s)	189, 429, 664, 820, 1166, 1176, 1370, 1490
BsaWI	WCCGGW	5 cut(s)	729, 945, 967, 1381, 1399
Bsc4I	CCNNNNNNNGG	6 cut(s)	348, 361, 539, 826, 1083, 1251
Bse118I	RCCGGY	3 cut(s)	314, 1201, 1399
Bse1I	ACTGG	2 cut(s)	1305, 1597
BseAI	TCCGGA	1 cut(s)	967
BseBI	CCWGG	3 cut(s)	191, 430, 1371
BseCI	ATCGAT	2 cut(s)	1704, 1739
BseDI	CCNNGG	8 cut(s)	189, 429, 664, 820, 1166, 1176, 1370, 1490
BseLI	CCNNNNNNNGG	6 cut(s)	348, 361, 539, 826, 1083, 1251
BseMII	CTCAG	2 cut(s)	173, 1229
BseNI	ACTGG	2 cut(s)	1305, 1597
BsePI	GCGCGC	1 cut(s)	640
BseRI	GAGGAG	4 cut(s)	16, 1298, 1535, 1538
BseSI	GKGCMC	1 cut(s)	1410
BseX3I	CGGCCG	2 cut(s)	853, 1081
BseXI	GCAGC	7 cut(s)	318, 459, 1275, 1278, 1335, 1605, 1633
Bsh1236I	CGCG	6 cut(s)	78, 234, 597, 642, 723, 1168
Bsh1285I	CGRYCG	5 cut(s)	229, 730, 856, 1084, 1188
BshFI	GGCC	9 cut(s)	296, 434, 614, 627, 855, 908, 1083, 1509, 1610
BshNI	GGYRCC	4 cut(s)	317, 441, 1198, 1405
BshTI	ACCGGT	1 cut(s)	1399
BshVI	ATCGAT	2 cut(s)	1704, 1739
BsiEI	CGRYCG	5 cut(s)	229, 730, 856, 1084, 1188
BsiHKAI	GWGCWC	5 cut(s)	225, 386, 524, 849, 1530
BslFI	GGGAC	4 cut(s)	224, 500, 934, 1387
BslI	CCNNNNNNNGG	6 cut(s)	348, 361, 539, 826, 1083, 1251
BsmAI	GTCTC	4 cut(s)	133, 576, 1234, 1719
BsmBI	CGTCTC	2 cut(s)	133, 576
BsmFI	GGGAC	4 cut(s)	224, 500, 934, 1387
BsmI	GAATGC	2 cut(s)	486, 1633
BsnI	GGCC	9 cut(s)	296, 434, 614, 627, 855, 908, 1083, 1509, 1610
Bso31I	GGTCTC	1 cut(s)	1234
Bsp119I	TTCGAA	1 cut(s)	918
Bsp1286I	GDGCHC	7 cut(s)	225, 386, 524, 849, 1410, 1490, 1530
Bsp13I	TCCGGA	1 cut(s)	967
Bsp143I	GATC	9 cut(s)	151, 162, 210, 390, 399, 501, 570, 633, 646
Bsp19I	CCATGG	1 cut(s)	1176
BspANI	GGCC	9 cut(s)	296, 434, 614, 627, 855, 908, 1083, 1509, 1610
BspCNI	CTCAG	2 cut(s)	172, 1230
BspDI	ATCGAT	2 cut(s)	1704, 1739
BspEI	TCCGGA	1 cut(s)	967
BspFNI	CGCG	6 cut(s)	78, 234, 597, 642, 723, 1168
BspLI	GGNNCC	9 cut(s)	319, 353, 443, 950, 1200, 1407, 1508, 1659, 1665
BspMAI	CTGCAG	1 cut(s)	336
BspMI	ACCTGC	1 cut(s)	991
BspPI	GGATC	3 cut(s)	146, 157, 628
BspT104I	TTCGAA	1 cut(s)	918
BspT107I	GGYRCC	4 cut(s)	317, 441, 1198, 1405
BspTNI	GGTCTC	1 cut(s)	1234
BsrBI	CCGCTC	1 cut(s)	423
BsrFI	RCCGGY	3 cut(s)	314, 1201, 1399
BsrI	ACTGG	2 cut(s)	1305, 1597
BssAI	RCCGGY	3 cut(s)	314, 1201, 1399
BssECI	CCNNGG	8 cut(s)	189, 429, 664, 820, 1166, 1176, 1370, 1490
BssHII	GCGCGC	1 cut(s)	640
BssMI	GATC	9 cut(s)	151, 162, 210, 390, 399, 501, 570, 633, 646
BssNI	GRCGYC	8 cut(s)	35, 237, 285, 318, 442, 744, 831, 1199
BssSI	CACGAG	1 cut(s)	1612
BssT1I	CCWWGG	2 cut(s)	1176, 1490
Bst2BI	CACGAG	1 cut(s)	1612
Bst2UI	CCWGG	3 cut(s)	191, 430, 1371
Bst4CI	ACNGT	4 cut(s)	1037, 1094, 1189, 1414
Bst6I	CTCTTC	1 cut(s)	665
BstACI	GRCGYC	8 cut(s)	35, 237, 285, 318, 442, 744, 831, 1199
BstBAI	YACGTR	3 cut(s)	458, 564, 1692
BstBI	TTCGAA	1 cut(s)	918
BstC8I	GCNNGC	6 cut(s)	316, 452, 642, 998, 1392, 1619
BstDEI	CTNAG	3 cut(s)	159, 1238, 1752
BstDSI	CCRYGG	2 cut(s)	1166, 1176
BstFNI	CGCG	6 cut(s)	78, 234, 597, 642, 723, 1168
BstH2I	RGCGCY	3 cut(s)	321, 445, 1202
BstHHI	GCGC	6 cut(s)	320, 444, 599, 642, 644, 1201
BstKTI	GATC	9 cut(s)	154, 165, 213, 393, 402, 504, 573, 636, 649
BstMAI	GTCTC	4 cut(s)	133, 576, 1234, 1719
BstMBI	GATC	9 cut(s)	151, 162, 210, 390, 399, 501, 570, 633, 646
BstMCI	CGRYCG	5 cut(s)	229, 730, 856, 1084, 1188
BstMWI	GCNNNNNNNGC	8 cut(s)	52, 293, 381, 481, 816, 983, 1462, 1630
BstNI	CCWGG	3 cut(s)	191, 430, 1371
BstNSI	RCATGY	1 cut(s)	1066
BstPAI	GACNNNNGTC	1 cut(s)	809
BstSFI	CTRYAG	2 cut(s)	332, 1451
BstSLI	GKGCMC	1 cut(s)	1410
BstUI	CGCG	6 cut(s)	78, 234, 597, 642, 723, 1168
BstV1I	GCAGC	7 cut(s)	318, 459, 1275, 1278, 1335, 1605, 1633
BstV2I	GAAGAC	5 cut(s)	887, 907, 928, 1032, 1283
BstX2I	RGATCY	5 cut(s)	162, 210, 501, 570, 633
BstYI	RGATCY	5 cut(s)	162, 210, 501, 570, 633
BstZI	CGGCCG	2 cut(s)	853, 1081
Bsu15I	ATCGAT	2 cut(s)	1704, 1739
BsuRI	GGCC	9 cut(s)	296, 434, 614, 627, 855, 908, 1083, 1509, 1610
BsuTUI	ATCGAT	2 cut(s)	1704, 1739
BtgI	CCRYGG	2 cut(s)	1166, 1176
BtgZI	GCGATG	2 cut(s)	448, 769
BtrI	CACGTC	3 cut(s)	325, 982, 1150
BtsI	GCAGTG	1 cut(s)	704
BtsIMutI	CAGTG	2 cut(s)	704, 1419
BveI	ACCTGC	1 cut(s)	991
Cac8I	GCNNGC	6 cut(s)	316, 452, 642, 998, 1392, 1619
CfoI	GCGC	6 cut(s)	320, 444, 599, 642, 644, 1201
Cfr10I	RCCGGY	3 cut(s)	314, 1201, 1399
Cfr13I	GGNCC	9 cut(s)	432, 858, 948, 1003, 1111, 1173, 1204, 1261, 1507
Cfr42I	CCGCGG	1 cut(s)	1169
ClaI	ATCGAT	2 cut(s)	1704, 1739
CseI	GACGC	7 cut(s)	24, 67, 293, 752, 799, 1132, 1561
Csp6I	GTAC	2 cut(s)	565, 1225
CspAI	ACCGGT	1 cut(s)	1399
CviAII	CATG	4 cut(s)	496, 826, 1063, 1177
CviQI	GTAC	2 cut(s)	565, 1225
DdeI	CTNAG	3 cut(s)	159, 1238, 1752
DinI	GGCGCC	3 cut(s)	319, 443, 1200
DpnI	GATC	9 cut(s)	153, 164, 212, 392, 401, 503, 572, 635, 648
DpnII	GATC	9 cut(s)	151, 162, 210, 390, 399, 501, 570, 633, 646
DraI	TTTAAA	1 cut(s)	279
EaeI	YGGCCR	5 cut(s)	294, 612, 853, 1081, 1608
EagI	CGGCCG	2 cut(s)	853, 1081
Eam1104I	CTCTTC	1 cut(s)	665
EarI	CTCTTC	1 cut(s)	665
EciI	GGCGGA	7 cut(s)	33, 205, 301, 415, 684, 1064, 1600
Ecl136II	GAGCTC	3 cut(s)	384, 522, 847
EclXI	CGGCCG	2 cut(s)	853, 1081
Eco130I	CCWWGG	2 cut(s)	1176, 1490
Eco24I	GRGCYC	4 cut(s)	386, 524, 849, 1490
Eco31I	GGTCTC	1 cut(s)	1234
Eco47I	GGWCC	7 cut(s)	858, 948, 1003, 1111, 1173, 1204, 1261
Eco52I	CGGCCG	2 cut(s)	853, 1081
Eco53kI	GAGCTC	3 cut(s)	384, 522, 847
Eco57I	CTGAAG	2 cut(s)	650, 922
Eco72I	CACGTG	1 cut(s)	458
EcoICRI	GAGCTC	3 cut(s)	384, 522, 847
EcoO109I	RGGNCCY	1 cut(s)	1003
EcoRII	CCWGG	3 cut(s)	189, 428, 1369
EcoT14I	CCWWGG	2 cut(s)	1176, 1490
EcoT38I	GRGCYC	4 cut(s)	386, 524, 849, 1490
EgeI	GGCGCC	3 cut(s)	319, 443, 1200
EheI	GGCGCC	3 cut(s)	319, 443, 1200
ErhI	CCWWGG	2 cut(s)	1176, 1490
Esp3I	CGTCTC	2 cut(s)	133, 576
FaeI	CATG	4 cut(s)	499, 829, 1066, 1180
FaiI	YATR	5 cut(s)	497, 827, 1064, 1178, 1689
FaqI	GGGAC	4 cut(s)	224, 500, 934, 1387
FatI	CATG	4 cut(s)	495, 825, 1062, 1176
FauI	CCCGC	4 cut(s)	149, 477, 982, 1374
FblI	GTMKAC	2 cut(s)	813, 1146
FriOI	GRGCYC	4 cut(s)	386, 524, 849, 1490
FspBI	CTAG	5 cut(s)	1013, 1019, 1491, 1680, 1698
GlaI	GCGC	6 cut(s)	319, 443, 598, 641, 643, 1200
HaeII	RGCGCY	3 cut(s)	321, 445, 1202
HaeIII	GGCC	9 cut(s)	296, 434, 614, 627, 855, 908, 1083, 1509, 1610
HgaI	GACGC	7 cut(s)	24, 67, 293, 752, 799, 1132, 1561
HhaI	GCGC	6 cut(s)	320, 444, 599, 642, 644, 1201
Hin1I	GRCGYC	8 cut(s)	35, 237, 285, 318, 442, 744, 831, 1199
Hin1II	CATG	4 cut(s)	499, 829, 1066, 1180
Hin6I	GCGC	6 cut(s)	318, 442, 597, 640, 642, 1199
HinP1I	GCGC	6 cut(s)	318, 442, 597, 640, 642, 1199
HincII	GTYRAC	1 cut(s)	1147
HindII	GTYRAC	1 cut(s)	1147
HphI	GGTGA	4 cut(s)	826, 1396, 1426, 1435
Hpy166II	GTNNAC	5 cut(s)	82, 704, 814, 1147, 1695
Hpy188III	TCNNGA	9 cut(s)	120, 517, 541, 574, 686, 968, 1013, 1207, 1231
Hpy8I	GTNNAC	5 cut(s)	82, 704, 814, 1147, 1695
HpyAV	CCTTC	3 cut(s)	898, 1318, 1572
HpyCH4III	ACNGT	4 cut(s)	1037, 1094, 1189, 1414
HpyCH4V	TGCA	3 cut(s)	334, 361, 925
HpyF10VI	GCNNNNNNNGC	8 cut(s)	52, 293, 381, 481, 816, 983, 1462, 1630
HpyF3I	CTNAG	3 cut(s)	159, 1238, 1752
Hsp92I	GRCGYC	8 cut(s)	35, 237, 285, 318, 442, 744, 831, 1199
Hsp92II	CATG	4 cut(s)	499, 829, 1066, 1180
HspAI	GCGC	6 cut(s)	318, 442, 597, 640, 642, 1199
KasI	GGCGCC	3 cut(s)	317, 441, 1198
Kpn2I	TCCGGA	1 cut(s)	967
KroI	GCCGGC	1 cut(s)	314
KroNI	GCCGGC	1 cut(s)	316
KspI	CCGCGG	1 cut(s)	1169
Kzo9I	GATC	9 cut(s)	151, 162, 210, 390, 399, 501, 570, 633, 646
Lsp1109I	GCAGC	7 cut(s)	318, 459, 1275, 1278, 1335, 1605, 1633
LweI	GCATC	1 cut(s)	1613
MaeI	CTAG	5 cut(s)	1013, 1019, 1491, 1680, 1698
MaeIII	GTNAC	4 cut(s)	832, 1150, 1189, 1296
MalI	GATC	9 cut(s)	153, 164, 212, 392, 401, 503, 572, 635, 648
MbiI	CCGCTC	1 cut(s)	423
MboI	GATC	9 cut(s)	151, 162, 210, 390, 399, 501, 570, 633, 646
MfeI	CAATTG	1 cut(s)	862
MflI	RGATCY	5 cut(s)	162, 210, 501, 570, 633
MhlI	GDGCHC	7 cut(s)	225, 386, 524, 849, 1410, 1490, 1530
MluCI	AATT	1 cut(s)	862
Mly113I	GGCGCC	3 cut(s)	318, 442, 1199
MlyI	GAGTC	6 cut(s)	151, 173, 182, 676, 785, 921
MmeI	TCCRAC	5 cut(s)	179, 201, 582, 804, 874
MreI	CGCCGGCG	1 cut(s)	314
MroI	TCCGGA	1 cut(s)	967
MroNI	GCCGGC	1 cut(s)	314
MroXI	GAANNNNTTC	1 cut(s)	737
MseI	TTAA	1 cut(s)	278
MslI	CAYNNNNRTG	3 cut(s)	467, 1478, 1638
MspA1I	CMGCKG	1 cut(s)	1168
MssI	GTTTAAAC	1 cut(s)	279
MunI	CAATTG	1 cut(s)	862
Mva1269I	GAATGC	2 cut(s)	486, 1633
MvaI	CCWGG	3 cut(s)	191, 430, 1371
MvnI	CGCG	6 cut(s)	78, 234, 597, 642, 723, 1168
MwoI	GCNNNNNNNGC	8 cut(s)	52, 293, 381, 481, 816, 983, 1462, 1630
NaeI	GCCGGC	1 cut(s)	316
NarI	GGCGCC	3 cut(s)	318, 442, 1199
NciI	CCSGG	7 cut(s)	346, 616, 699, 760, 822, 952, 1115
NcoI	CCATGG	1 cut(s)	1176
NdeII	GATC	9 cut(s)	151, 162, 210, 390, 399, 501, 570, 633, 646
NgoMIV	GCCGGC	1 cut(s)	314
NlaIII	CATG	4 cut(s)	499, 829, 1066, 1180
NlaIV	GGNNCC	9 cut(s)	319, 353, 443, 950, 1200, 1407, 1508, 1659, 1665
NmeAIII	GCCGAG	2 cut(s)	645, 868
NmuCI	GTSAC	2 cut(s)	832, 1150
NspI	RCATGY	1 cut(s)	1066
NspV	TTCGAA	1 cut(s)	918
PauI	GCGCGC	1 cut(s)	640
PcsI	WCGNNNNNNNCGW	9 cut(s)	26, 35, 231, 522, 555, 672, 1029, 1074, 1547
PctI	GAATGC	2 cut(s)	486, 1633
PdiI	GCCGGC	1 cut(s)	316
PdmI	GAANNNNTTC	1 cut(s)	737
PfeI	GAWTC	6 cut(s)	123, 792, 887, 1054, 1071, 1675
PflFI	GACNNNGTC	2 cut(s)	34, 775
PfoI	TCCNGGA	1 cut(s)	950
PinAI	ACCGGT	1 cut(s)	1399
PleI	GAGTC	6 cut(s)	151, 173, 181, 676, 784, 920
PluTI	GGCGCC	3 cut(s)	321, 445, 1202
PmaCI	CACGTG	1 cut(s)	458
PmeI	GTTTAAAC	1 cut(s)	279
PmlI	CACGTG	1 cut(s)	458
PpsI	GAGTC	6 cut(s)	151, 173, 181, 676, 784, 920
Ppu21I	YACGTR	3 cut(s)	458, 564, 1692
PpuMI	RGGWCCY	1 cut(s)	1003
PshAI	GACNNNNGTC	1 cut(s)	809
Psp124BI	GAGCTC	3 cut(s)	386, 524, 849
Psp5II	RGGWCCY	1 cut(s)	1003
Psp6I	CCWGG	3 cut(s)	189, 428, 1369
PspCI	CACGTG	1 cut(s)	458
PspGI	CCWGG	3 cut(s)	189, 428, 1369
PspN4I	GGNNCC	9 cut(s)	319, 353, 443, 950, 1200, 1407, 1508, 1659, 1665
PspPI	GGNCC	9 cut(s)	432, 858, 948, 1003, 1111, 1173, 1204, 1261, 1507
PspPPI	RGGWCCY	1 cut(s)	1003
PstI	CTGCAG	1 cut(s)	336
PsuI	RGATCY	5 cut(s)	162, 210, 501, 570, 633
PsyI	GACNNNGTC	2 cut(s)	34, 775
PteI	GCGCGC	1 cut(s)	640
RsaI	GTAC	2 cut(s)	566, 1226
RsaNI	GTAC	2 cut(s)	565, 1225
RseI	CAYNNNNRTG	3 cut(s)	467, 1478, 1638
SacI	GAGCTC	3 cut(s)	386, 524, 849
SacII	CCGCGG	1 cut(s)	1169
SalI	GTCGAC	1 cut(s)	1145
SaqAI	TTAA	1 cut(s)	278
Sau3AI	GATC	9 cut(s)	151, 162, 210, 390, 399, 501, 570, 633, 646
Sau96I	GGNCC	9 cut(s)	432, 858, 948, 1003, 1111, 1173, 1204, 1261, 1507
SchI	GAGTC	6 cut(s)	151, 173, 182, 676, 785, 921
SduI	GDGCHC	7 cut(s)	225, 386, 524, 849, 1410, 1490, 1530
SfaNI	GCATC	1 cut(s)	1613
SfcI	CTRYAG	2 cut(s)	332, 1451
SfoI	GGCGCC	3 cut(s)	319, 443, 1200
Sfr303I	CCGCGG	1 cut(s)	1169
SfuI	TTCGAA	1 cut(s)	918
SgrAI	CRCCGGYG	1 cut(s)	314
SgrBI	CCGCGG	1 cut(s)	1169
SgrDI	CGTCGACG	1 cut(s)	1145
SinI	GGWCC	7 cut(s)	858, 948, 1003, 1111, 1173, 1204, 1261
SmiMI	CAYNNNNRTG	3 cut(s)	467, 1478, 1638
SmlI	CTYRAG	2 cut(s)	50, 407
SmoI	CTYRAG	2 cut(s)	50, 407
SpeI	ACTAGT	1 cut(s)	1697
Sse9I	AATT	1 cut(s)	862
SspDI	GGCGCC	3 cut(s)	317, 441, 1198
SspMI	CTAG	5 cut(s)	1013, 1019, 1491, 1680, 1698
SstI	GAGCTC	3 cut(s)	386, 524, 849
StyI	CCWWGG	2 cut(s)	1176, 1490
TaaI	ACNGT	4 cut(s)	1037, 1094, 1189, 1414
TaqII	GACCGA	2 cut(s)	788, 899
TasI	AATT	1 cut(s)	862
TfiI	GAWTC	6 cut(s)	123, 792, 887, 1054, 1071, 1675
Tru1I	TTAA	1 cut(s)	278
Tru9I	TTAA	1 cut(s)	278
TscAI	CASTG	2 cut(s)	711, 1419
TseFI	GTSAC	2 cut(s)	832, 1150
TseI	GCWGC	7 cut(s)	331, 472, 1288, 1291, 1348, 1593, 1621
Tsp45I	GTSAC	2 cut(s)	832, 1150
TspDTI	ATGAA	1 cut(s)	1090
TspRI	CASTG	2 cut(s)	711, 1419
Tth111I	GACNNNGTC	2 cut(s)	34, 775
VpaK11BI	GGWCC	7 cut(s)	858, 948, 1003, 1111, 1173, 1204, 1261
XbaI	TCTAGA	1 cut(s)	1012
XceI	RCATGY	1 cut(s)	1066
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1417
XmaJI	CCTAGG	1 cut(s)	1490
XmiI	GTMKAC	2 cut(s)	813, 1146
XmnI	GAANNNNTTC	1 cut(s)	737
XspI	CTAG	5 cut(s)	1013, 1019, 1491, 1680, 1698
ZraI	GACGTC	2 cut(s)	238, 832

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.