RLG00000022111
MYB Family

RNA polymerase II transcription regulator recruiting activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0004738
Physical Location & Seq
Forward (+)
81017677 .. 81021306
3630 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022111

Sequence Viewer

Length: 1584 bp
ATGGACTACAGAGAGGGGAGTTTGTCTTTTCTTTCCACCCTCCTCTCCGGGATGAAGCCGGAGCCTCATCCGGAGAATGTCGACCTCAACACCCGTTTATTCAAACCTCCCTCACCTAATGGTGACTATAAGCCAAACACTCTCTTTGAAAACCCCTCTCACTTTGAGAACCAAGAAAGCAGGGGGATTGATCTGAATTATTCAGATCAATACCATCAGAGTTCTCCTCTCCTCGGTGGTAACCATTTCGGTGGTACCACTGTTGAGGGCTCTTCATCAAACCCCTTTTGTGGGGTTGATCTCGCTACCATCAAAGGGTTCAATCAACCTTTTGATGCATGTTACAACCAGGCTGATAATCCCAACCTGCAATCAAACGATGTCAATATTTTCCCTTATGCCCCCATGGCAGCTGTTTCTTTTGCAGACAACCAGAAGGCTGTCATGCATGGCGGGTGGGGGGACTACGATGACGCTCCTCGTCATCGTCATCAAGACCAACACCATCACCAGATGCGAGACTACCACCATCACCACCAGATGCCAGCTATGCAGCCGTTGCCGGAGGCTACACAAGCGACAAGCTGTGTCCAGCTTCCGCCCCTCGTCAATTTCCAAGAATTCGAATCAGCTACGCCTAGGGTTATGCTGCAATCAGCCGATGAGTACTACTCCTCCTGTAACATAACCCCGAAGGAAAATGAGCTTTGCAAGAAGAAGAGGCATTACAGTAAAAAAGCCAGTAAAGATGGGCGCGAAGCAATGATCACTAAGGGGCAATGGACGCCCCAGGAAGACAGACTACTGACAGAGCTAGTGGAGAGATATGGGGATAAAAAGTGGTCTCAAATTTCTAAGGTGCTGAAAGGTCGAGTCGGAAAACAGTGTAGAGAAAGATGGCACAACCATCTCCGGCCTGACATTAGGAAAGAAACGTGGAGCGAAGAAGAGGATAAGATCCTGATCGAGGTGCACAAACAGATCGGAAACCGGTGGGCCGAGATCGCCAAGAGGCTTCCGGGGAGGACCGAGAACACTATCAAGAACCACTGGAACGCCACCATGAGGAAGCGATACCTCAAGAGAAAACTGACTACCAATATCAATCGGAACATTAAGGACTCCTCCGCCAGCTACATTAATGAGAGCACTGTCCTGTCCAACTACATCAAGAGCGTGGTGAAATCCTCGGCCGCTGTTTCGGCCGAAAAGAAGAAGGGGAAGACTGCAGTGGTGTATGGTGAACAATCAAGTCTGCAAAATTTACCCGAGTCCAACGTCTATCATCCCCAGTTTGAGAAGGGTAACGGTGCAACGGTGTATGGTGAACAATCAACAAGTTTGCACGATCTACCTATGTCCGAAGTCTATCGTCCCCAGTTCGAGCCTAGCTCCTACAATATGGAATGGGCGGCTTCGGTGGCAGCCCCCGCTGCTATGAATGCAAGCAAGCAGCTGAACAACTCCGGCGTGGAGGCGACTATGGGGAGCAGCAGCTCTTATCTCTCTTCTTACAGAACCATGTATCCTGAGTTCTACGGGTACGGGAATGGGGCTAAGAAGCTTGATAAAACTCCCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000278 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006355 GO:0006357 GO:0006935 GO:0007049 GO:0007275 GO:0008150 GO:0009553 GO:0009605 GO:0009790 GO:0009791 GO:0009793 GO:0009856 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009960 GO:0009987 GO:0010154 GO:0010183 GO:0010228 GO:0010262 GO:0010439 GO:0010468 GO:0010556 GO:0010557 GO:0010565 GO:0010604 GO:0010628 GO:0010675 GO:0019216 GO:0019217 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0040011 GO:0042221 GO:0042304 GO:0042330 GO:0042592 GO:0042762 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043455 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0044706 GO:0045595 GO:0045691 GO:0045697 GO:0045723 GO:0045834 GO:0045893 GO:0045923 GO:0045935 GO:0045995 GO:0046889 GO:0046890 GO:0048229 GO:0048316 GO:0048518 GO:0048519 GO:0048522 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0050918 GO:0051093 GO:0051171 GO:0051173 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051704 GO:0055081 GO:0055088 GO:0055089 GO:0060255 GO:0061458 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0080050 GO:0080090 GO:0097159 GO:0140110 GO:1900376 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1904095 GO:2000014 GO:2000026 GO:2000034 GO:2000112 GO:2000241 GO:2000242 GO:2000692 GO:2001141 GO:2001279 GO:2001280
KEGG Pathways
Metabolic & Signaling
ko04151 ko05166 map04151 map05166
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

528

Amino Acids

59.77

Weight (kDa)

8.28

Isoelectric Point (pI)

49.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 258 - 304 1.8e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 261 - 318 1.2e-20 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 310 - 352 2.6e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 313 - 356 1.7e-10 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 375
Acc65I GGTACC 1 cut(s) 254
AccB1I GGYRCC 1 cut(s) 254
AccI GTMKAC 1 cut(s) 81
AccII CGCG 1 cut(s) 756
AccIII TCCGGA 1 cut(s) 70
AciI CCGC 6 cut(s) 453, 599, 1128, 1194, 1412, 1431
AclWI GGATC 1 cut(s) 952
AcoI YGGCCR 2 cut(s) 1191, 1203
AcsI RAATTY 3 cut(s) 620, 849, 1261
AcyI GRCGYC 1 cut(s) 785
AfaI GTAC 3 cut(s) 256, 668, 1544
AfiI CCNNNNNNNGG 6 cut(s) 233, 290, 291, 315, 967, 1065
AgeI ACCGGT 1 cut(s) 990
AgsI TTSAA 3 cut(s) 103, 149, 322
AjnI CCWGG 2 cut(s) 348, 789
AloI GAACNNNNNNTCC 2 cut(s) 1510, 1542
Alw21I GWGCWC 2 cut(s) 975, 1151
Alw26I GTCTC 2 cut(s) 513, 849
Alw44I GTGCAC 1 cut(s) 971
AlwI GGATC 1 cut(s) 952
Ama87I CYCGRG 1 cut(s) 1268
Aor13HI TCCGGA 1 cut(s) 70
AoxI GGCC 4 cut(s) 914, 996, 1191, 1203
ApaLI GTGCAC 1 cut(s) 971
ApeKI GCWGC 8 cut(s) 410, 553, 649, 1424, 1433, 1453, 1491, 1494
ApoI RAATTY 3 cut(s) 620, 849, 1261
AseI ATTAAT 1 cut(s) 1140
AsiGI ACCGGT 1 cut(s) 990
Asp718I GGTACC 1 cut(s) 254
AspA2I CCTAGG 1 cut(s) 638
AspLEI GCGC 1 cut(s) 756
AspS9I GGNCC 2 cut(s) 996, 1026
AsuC2I CCSGG 2 cut(s) 49, 1020
AsuHPI GGTGA 7 cut(s) 105, 134, 500, 524, 1192, 1253, 1337
AsuII TTCGAA 1 cut(s) 624
AvaI CYCGRG 1 cut(s) 1268
AvaII GGWCC 1 cut(s) 1026
AvrII CCTAGG 1 cut(s) 638
BaeGI GKGCMC 1 cut(s) 975
BaeI ACNNNNGTAYC 2 cut(s) 246, 279
BanI GGYRCC 1 cut(s) 254
BanII GRGCYC 1 cut(s) 272
BarI GAAGNNNNNNTAC 4 cut(s) 710, 742, 786, 818
BbsI GAAGAC 2 cut(s) 801, 1229
Bbv12I GWGCWC 2 cut(s) 975, 1151
BbvI GCAGC 8 cut(s) 422, 565, 636, 1420, 1436, 1465, 1503, 1506
BccI CCATC 7 cut(s) 222, 317, 513, 537, 743, 891, 915
BceAI ACGGC 1 cut(s) 541
BciT130I CCWGG 2 cut(s) 350, 791
BciVI GTATCC 1 cut(s) 1536
BclI TGATCA 1 cut(s) 765
BcnI CCSGG 2 cut(s) 49, 1020
BcoDI GTCTC 2 cut(s) 513, 849
BfaI CTAG 3 cut(s) 639, 815, 1389
BfmI CTRYAG 2 cut(s) 7, 1227
BfuAI ACCTGC 1 cut(s) 375
BfuI GTATCC 1 cut(s) 1536
BglI GCCNNNNNGGC 1 cut(s) 407
BlnI CCTAGG 1 cut(s) 638
BmcAI AGTACT 1 cut(s) 668
Bme1390I CCNGG 4 cut(s) 49, 350, 791, 1020
Bme18I GGWCC 1 cut(s) 1026
BmeT110I CYCGRG 1 cut(s) 1268
BmgT120I GGNCC 2 cut(s) 996, 1026
BmiI GGNNCC 2 cut(s) 63, 256
BmrFI CCNGG 4 cut(s) 49, 350, 791, 1020
BmrI ACTGGG 2 cut(s) 1285, 1372
BmsI GCATC 3 cut(s) 325, 504, 531
BmuI ACTGGG 2 cut(s) 1285, 1372
BpiI GAAGAC 2 cut(s) 801, 1229
BplI GAGNNNNNCTC 6 cut(s) 211, 243, 656, 688, 1376, 1408
Bpu14I TTCGAA 1 cut(s) 624
BpuEI CTTGAG 1 cut(s) 1064
BpuMI CCSGG 2 cut(s) 49, 1020
BsaBI GATNNNNATC 1 cut(s) 962
BsaHI GRCGYC 1 cut(s) 785
BsaI GGTCTC 1 cut(s) 849
BsaJI CCNNGG 6 cut(s) 232, 405, 638, 789, 1019, 1188
BsaWI WCCGGW 2 cut(s) 70, 990
BsaXI ACNNNNNCTCC 2 cut(s) 659, 689
Bsc4I CCNNNNNNNGG 6 cut(s) 233, 290, 291, 315, 967, 1065
Bse118I RCCGGY 1 cut(s) 990
Bse1I ACTGG 4 cut(s) 741, 1055, 1291, 1378
Bse3DI GCAATG 2 cut(s) 768, 785
Bse8I GATNNNNATC 1 cut(s) 962
BseAI TCCGGA 1 cut(s) 70
BseBI CCWGG 2 cut(s) 350, 791
BseDI CCNNGG 6 cut(s) 232, 405, 638, 789, 1019, 1188
BseGI GGATG 3 cut(s) 57, 67, 1285
BseJI GATNNNNATC 1 cut(s) 962
BseLI CCNNNNNNNGG 6 cut(s) 233, 290, 291, 315, 967, 1065
BseMI GCAATG 2 cut(s) 768, 785
BseMII CTCAG 1 cut(s) 1521
BseNI ACTGG 4 cut(s) 741, 1055, 1291, 1378
BseRI GAGGAG 6 cut(s) 32, 216, 221, 468, 664, 1114
BseSI GKGCMC 1 cut(s) 975
BseX3I CGGCCG 2 cut(s) 1191, 1203
BseXI GCAGC 8 cut(s) 422, 565, 636, 1420, 1436, 1465, 1503, 1506
Bsh1236I CGCG 1 cut(s) 756
Bsh1285I CGRYCG 2 cut(s) 1194, 1206
BshFI GGCC 4 cut(s) 916, 998, 1193, 1205
BshNI GGYRCC 1 cut(s) 254
BshTI ACCGGT 1 cut(s) 990
BsiEI CGRYCG 2 cut(s) 1194, 1206
BsiHKAI GWGCWC 2 cut(s) 975, 1151
BsiHKCI CYCGRG 1 cut(s) 1268
BsiSI CCGG 8 cut(s) 48, 59, 71, 563, 913, 991, 1019, 1467
BslFI GGGAC 2 cut(s) 476, 1359
BslI CCNNNNNNNGG 6 cut(s) 233, 290, 291, 315, 967, 1065
BsmAI GTCTC 2 cut(s) 513, 849
BsmFI GGGAC 2 cut(s) 476, 1359
BsmI GAATGC 1 cut(s) 1447
BsnI GGCC 4 cut(s) 916, 998, 1193, 1205
Bso31I GGTCTC 1 cut(s) 849
BsoBI CYCGRG 1 cut(s) 1268
Bsp119I TTCGAA 1 cut(s) 624
Bsp1286I GDGCHC 3 cut(s) 272, 975, 1151
Bsp13I TCCGGA 1 cut(s) 70
Bsp143I GATC 9 cut(s) 190, 205, 298, 765, 957, 963, 981, 1002, 1348
Bsp19I CCATGG 1 cut(s) 405
BspACI CCGC 6 cut(s) 453, 599, 1128, 1194, 1412, 1431
BspANI GGCC 4 cut(s) 916, 998, 1193, 1205
BspCNI CTCAG 1 cut(s) 1522
BspEI TCCGGA 1 cut(s) 70
BspFNI CGCG 1 cut(s) 756
BspLI GGNNCC 2 cut(s) 63, 256
BspMAI CTGCAG 1 cut(s) 1231
BspMI ACCTGC 1 cut(s) 375
BspPI GGATC 1 cut(s) 952
BspQI GCTCTTC 1 cut(s) 277
BspT104I TTCGAA 1 cut(s) 624
BspT107I GGYRCC 1 cut(s) 254
BspTNI GGTCTC 1 cut(s) 849
BsrDI GCAATG 2 cut(s) 768, 785
BsrFI RCCGGY 1 cut(s) 990
BsrI ACTGG 4 cut(s) 741, 1055, 1291, 1378
BssAI RCCGGY 1 cut(s) 990
BssECI CCNNGG 6 cut(s) 232, 405, 638, 789, 1019, 1188
BssMI GATC 9 cut(s) 190, 205, 298, 765, 957, 963, 981, 1002, 1348
BssNI GRCGYC 1 cut(s) 785
BssT1I CCWWGG 2 cut(s) 405, 638
Bst2UI CCWGG 2 cut(s) 350, 791
Bst4CI ACNGT 6 cut(s) 262, 731, 885, 1153, 1310, 1318
Bst6I CTCTTC 4 cut(s) 277, 713, 942, 1513
BstACI GRCGYC 1 cut(s) 785
BstAPI GCANNNNNTGC 1 cut(s) 559
BstBI TTCGAA 1 cut(s) 624
BstC8I GCNNGC 4 cut(s) 546, 1132, 1447, 1451
BstDEI CTNAG 4 cut(s) 771, 855, 1530, 1557
BstDSI CCRYGG 1 cut(s) 405
BstEII GGTNACC 1 cut(s) 239
BstENI CCTNNNNNAGG 1 cut(s) 965
BstF5I GGATG 3 cut(s) 57, 67, 1285
BstFNI CGCG 1 cut(s) 756
BstHHI GCGC 1 cut(s) 756
BstKTI GATC 9 cut(s) 193, 208, 301, 768, 960, 966, 984, 1005, 1351
BstMAI GTCTC 2 cut(s) 513, 849
BstMBI GATC 9 cut(s) 190, 205, 298, 765, 957, 963, 981, 1002, 1348
BstMCI CGRYCG 2 cut(s) 1194, 1206
BstNI CCWGG 2 cut(s) 350, 791
BstNSI RCATGY 1 cut(s) 342
BstPI GGTNACC 1 cut(s) 239
BstSCI CCNGG 4 cut(s) 47, 348, 789, 1018
BstSFI CTRYAG 2 cut(s) 7, 1227
BstSLI GKGCMC 1 cut(s) 975
BstUI CGCG 1 cut(s) 756
BstV1I GCAGC 8 cut(s) 422, 565, 636, 1420, 1436, 1465, 1503, 1506
BstV2I GAAGAC 2 cut(s) 801, 1229
BstX2I RGATCY 1 cut(s) 957
BstXI CCANNNNNNTGG 1 cut(s) 251
BstYI RGATCY 1 cut(s) 957
BstZI CGGCCG 2 cut(s) 1191, 1203
BsuI GTATCC 1 cut(s) 1536
BsuRI GGCC 4 cut(s) 916, 998, 1193, 1205
BtgI CCRYGG 1 cut(s) 405
BtsCI GGATG 3 cut(s) 57, 67, 1285
BtsI GCAGTG 1 cut(s) 1236
BtsIMutI CAGTG 5 cut(s) 258, 890, 1048, 1149, 1236
BveI ACCTGC 1 cut(s) 375
Cac8I GCNNGC 4 cut(s) 546, 1132, 1447, 1451
CfoI GCGC 1 cut(s) 756
Cfr10I RCCGGY 1 cut(s) 990
Cfr13I GGNCC 2 cut(s) 996, 1026
CseI GACGC 2 cut(s) 482, 793
Csp6I GTAC 3 cut(s) 255, 667, 1543
CspAI ACCGGT 1 cut(s) 990
CviAII CATG 6 cut(s) 339, 406, 445, 449, 1063, 1522
CviQI GTAC 3 cut(s) 255, 667, 1543
DdeI CTNAG 4 cut(s) 771, 855, 1530, 1557
DpnI GATC 9 cut(s) 192, 207, 300, 767, 959, 965, 983, 1004, 1350
DpnII GATC 9 cut(s) 190, 205, 298, 765, 957, 963, 981, 1002, 1348
EaeI YGGCCR 2 cut(s) 1191, 1203
EagI CGGCCG 2 cut(s) 1191, 1203
Eam1104I CTCTTC 4 cut(s) 277, 713, 942, 1513
EarI CTCTTC 4 cut(s) 277, 713, 942, 1513
EciI GGCGGA 2 cut(s) 588, 1117
EclXI CGGCCG 2 cut(s) 1191, 1203
Eco130I CCWWGG 2 cut(s) 405, 638
Eco24I GRGCYC 1 cut(s) 272
Eco31I GGTCTC 1 cut(s) 849
Eco47I GGWCC 1 cut(s) 1026
Eco52I CGGCCG 2 cut(s) 1191, 1203
Eco88I CYCGRG 1 cut(s) 1268
Eco91I GGTNACC 1 cut(s) 239
EcoNI CCTNNNNNAGG 1 cut(s) 965
EcoO65I GGTNACC 1 cut(s) 239
EcoRI GAATTC 1 cut(s) 620
EcoRII CCWGG 2 cut(s) 348, 789
EcoT14I CCWWGG 2 cut(s) 405, 638
EcoT22I ATGCAT 2 cut(s) 340, 450
EcoT38I GRGCYC 1 cut(s) 272
ErhI CCWWGG 2 cut(s) 405, 638
FaeI CATG 6 cut(s) 342, 409, 448, 452, 1066, 1525
FaqI GGGAC 2 cut(s) 476, 1359
FatI CATG 6 cut(s) 338, 405, 444, 448, 1062, 1521
FauI CCCGC 2 cut(s) 446, 1438
FbaI TGATCA 1 cut(s) 765
FblI GTMKAC 1 cut(s) 81
FokI GGATG 3 cut(s) 54, 64, 1272
FriOI GRGCYC 1 cut(s) 272
FspBI CTAG 3 cut(s) 639, 815, 1389
GlaI GCGC 1 cut(s) 755
HaeIII GGCC 4 cut(s) 916, 998, 1193, 1205
HapII CCGG 8 cut(s) 48, 59, 71, 563, 913, 991, 1019, 1467
HgaI GACGC 2 cut(s) 482, 793
HhaI GCGC 1 cut(s) 756
Hin1I GRCGYC 1 cut(s) 785
Hin1II CATG 6 cut(s) 342, 409, 448, 452, 1066, 1525
Hin6I GCGC 1 cut(s) 754
HinP1I GCGC 1 cut(s) 754
HincII GTYRAC 1 cut(s) 82
HindII GTYRAC 1 cut(s) 82
HindIII AAGCTT 1 cut(s) 1562
HinfI GANTC 4 cut(s) 626, 873, 1121, 1271
HpaII CCGG 8 cut(s) 48, 59, 71, 563, 913, 991, 1019, 1467
HphI GGTGA 7 cut(s) 105, 134, 500, 524, 1192, 1253, 1337
Hpy166II GTNNAC 4 cut(s) 82, 973, 1244, 1328
Hpy188I TCNGA 7 cut(s) 195, 205, 219, 878, 986, 1110, 1363
Hpy188III TCNNGA 7 cut(s) 71, 494, 961, 1042, 1081, 1171, 1529
Hpy8I GTNNAC 4 cut(s) 82, 973, 1244, 1328
HpyAV CCTTC 4 cut(s) 430, 688, 1210, 1294
HpyCH4III ACNGT 6 cut(s) 262, 731, 885, 1153, 1310, 1318
HpyCH4IV ACGT 2 cut(s) 935, 1278
HpyF3I CTNAG 4 cut(s) 771, 855, 1530, 1557
HpySE526I ACGT 2 cut(s) 935, 1278
Hsp92I GRCGYC 1 cut(s) 785
Hsp92II CATG 6 cut(s) 342, 409, 448, 452, 1066, 1525
HspAI GCGC 1 cut(s) 754
Kpn2I TCCGGA 1 cut(s) 70
KpnI GGTACC 1 cut(s) 258
Ksp22I TGATCA 1 cut(s) 765
Kzo9I GATC 9 cut(s) 190, 205, 298, 765, 957, 963, 981, 1002, 1348
LguI GCTCTTC 1 cut(s) 277
LmnI GCTCC 5 cut(s) 61, 481, 939, 1397, 1488
Lsp1109I GCAGC 8 cut(s) 422, 565, 636, 1420, 1436, 1465, 1503, 1506
LweI GCATC 3 cut(s) 325, 504, 531
MaeI CTAG 3 cut(s) 639, 815, 1389
MaeII ACGT 2 cut(s) 935, 1278
MaeIII GTNAC 5 cut(s) 122, 239, 341, 680, 1304
MalI GATC 9 cut(s) 192, 207, 300, 767, 959, 965, 983, 1004, 1350
MboI GATC 9 cut(s) 190, 205, 298, 765, 957, 963, 981, 1002, 1348
MboII GAAGA 9 cut(s) 264, 727, 730, 806, 956, 959, 1225, 1234, 1500
MflI RGATCY 1 cut(s) 957
MhlI GDGCHC 3 cut(s) 272, 975, 1151
MluCI AATT 5 cut(s) 196, 610, 620, 849, 1261
MlyI GAGTC 3 cut(s) 882, 1115, 1280
MmeI TCCRAC 3 cut(s) 856, 1185, 1299
Mph1103I ATGCAT 2 cut(s) 340, 450
MroI TCCGGA 1 cut(s) 70
MseI TTAA 3 cut(s) 1116, 1140, 1582
MslI CAYNNNNRTG 1 cut(s) 249
MspA1I CMGCKG 4 cut(s) 413, 1196, 1433, 1456
MspI CCGG 8 cut(s) 48, 59, 71, 563, 913, 991, 1019, 1467
MspR9I CCNGG 4 cut(s) 49, 350, 791, 1020
Mva1269I GAATGC 1 cut(s) 1447
MvaI CCWGG 2 cut(s) 350, 791
MvnI CGCG 1 cut(s) 756
NciI CCSGG 2 cut(s) 49, 1020
NcoI CCATGG 1 cut(s) 405
NdeII GATC 9 cut(s) 190, 205, 298, 765, 957, 963, 981, 1002, 1348
NlaIII CATG 6 cut(s) 342, 409, 448, 452, 1066, 1525
NlaIV GGNNCC 2 cut(s) 63, 256
NmeAIII GCCGAG 2 cut(s) 1024, 1169
NmuCI GTSAC 1 cut(s) 122
NsiI ATGCAT 2 cut(s) 340, 450
NspI RCATGY 1 cut(s) 342
NspV TTCGAA 1 cut(s) 624
PciSI GCTCTTC 1 cut(s) 277
PctI GAATGC 1 cut(s) 1447
PfeI GAWTC 1 cut(s) 626
PfoI TCCNGGA 1 cut(s) 47
PinAI ACCGGT 1 cut(s) 990
PleI GAGTC 3 cut(s) 881, 1115, 1279
PpsI GAGTC 3 cut(s) 881, 1115, 1279
PshBI ATTAAT 1 cut(s) 1140
Psp6I CCWGG 2 cut(s) 348, 789
PspEI GGTNACC 1 cut(s) 239
PspGI CCWGG 2 cut(s) 348, 789
PspN4I GGNNCC 2 cut(s) 63, 256
PspPI GGNCC 2 cut(s) 996, 1026
PsrI GAACNNNNNNTAC 2 cut(s) 1517, 1549
PstI CTGCAG 1 cut(s) 1231
PsuI RGATCY 1 cut(s) 957
PvuII CAGCTG 2 cut(s) 413, 1456
RsaI GTAC 3 cut(s) 256, 668, 1544
RsaNI GTAC 3 cut(s) 255, 667, 1543
RseI CAYNNNNRTG 1 cut(s) 249
SalI GTCGAC 1 cut(s) 80
SapI GCTCTTC 1 cut(s) 277
SaqAI TTAA 3 cut(s) 1116, 1140, 1582
Sau3AI GATC 9 cut(s) 190, 205, 298, 765, 957, 963, 981, 1002, 1348
Sau96I GGNCC 2 cut(s) 996, 1026
ScaI AGTACT 1 cut(s) 668
SchI GAGTC 3 cut(s) 882, 1115, 1280
ScrFI CCNGG 4 cut(s) 49, 350, 791, 1020
SduI GDGCHC 3 cut(s) 272, 975, 1151
SfaNI GCATC 3 cut(s) 325, 504, 531
SfcI CTRYAG 2 cut(s) 7, 1227
SfuI TTCGAA 1 cut(s) 624
SinI GGWCC 1 cut(s) 1026
SmiMI CAYNNNNRTG 1 cut(s) 249
SmlI CTYRAG 1 cut(s) 1079
SmoI CTYRAG 1 cut(s) 1079
Sse9I AATT 5 cut(s) 196, 610, 620, 849, 1261
SsiI CCGC 6 cut(s) 453, 599, 1128, 1194, 1412, 1431
SspI AATATT 1 cut(s) 388
SspMI CTAG 3 cut(s) 639, 815, 1389
StyD4I CCNGG 4 cut(s) 47, 348, 789, 1018
StyI CCWWGG 2 cut(s) 405, 638
TaaI ACNGT 6 cut(s) 262, 731, 885, 1153, 1310, 1318
TaiI ACGT 2 cut(s) 938, 1281
TaqI TCGA 5 cut(s) 81, 624, 871, 966, 1383
TaqII GACCGA 1 cut(s) 1043
TasI AATT 5 cut(s) 196, 610, 620, 849, 1261
TatI WGTACW 1 cut(s) 666
TauI GCSGC 2 cut(s) 1196, 1415
TfiI GAWTC 1 cut(s) 626
Tru1I TTAA 3 cut(s) 1116, 1140, 1582
Tru9I TTAA 3 cut(s) 1116, 1140, 1582
TscAI CASTG 5 cut(s) 265, 890, 1055, 1156, 1236
TseFI GTSAC 1 cut(s) 122
TseI GCWGC 8 cut(s) 410, 553, 649, 1424, 1433, 1453, 1491, 1494
Tsp45I GTSAC 1 cut(s) 122
TspDTI ATGAA 3 cut(s) 68, 264, 1454
TspRI CASTG 5 cut(s) 265, 890, 1055, 1156, 1236
VneI GTGCAC 1 cut(s) 971
VpaK11BI GGWCC 1 cut(s) 1026
VspI ATTAAT 1 cut(s) 1140
XagI CCTNNNNNAGG 1 cut(s) 965
XapI RAATTY 3 cut(s) 620, 849, 1261
XceI RCATGY 1 cut(s) 342
XmaJI CCTAGG 1 cut(s) 638
XmiI GTMKAC 1 cut(s) 81
XspI CTAG 3 cut(s) 639, 815, 1389
ZrmI AGTACT 1 cut(s) 668
Zsp2I ATGCAT 2 cut(s) 340, 450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.